AlfalfaGEDB | Msa1341750

M. sativa cultivar zhongmu-4 / Msa1341750

KEGG: -
GO: GO:0003674 GO:0003824 GO:0006629 GO:0008150 GO:0008152 GO:0008202 GO:0016229 GO:0016491 GO:0044238 GO:0055114 GO:0071704 GO:1901360
PFAM: PF06966.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1341750	XP_013450622.2	94.715	246	10	2	1	243	77	322	5.35e-167	474

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1341750	A0A072UFT9	94.715	246	10	2	1	243	69	314	1.03e-166	472

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0025160	Msa1341750	0.808456	3.070330e-50	-8.615850e-47
Msa0063190	Msa1341750	0.826912	2.090976e-54	-8.615850e-47
Msa0069350	Msa1341750	0.811433	7.018225e-51	-8.615850e-47
Msa0072520	Msa1341750	0.828099	1.085181e-54	-8.615850e-47
Msa0080820	Msa1341750	0.801381	9.247536e-49	-8.615850e-47
Msa0084990	Msa1341750	0.800112	1.679218e-48	-8.615850e-47
Msa0086250	Msa1341750	0.836424	9.435348e-57	-8.615850e-47
Msa0612520	Msa1341750	0.863839	1.869024e-64	-8.615850e-47
Msa0619710	Msa1341750	0.834346	3.160486e-56	-8.615850e-47
Msa0620900	Msa1341750	0.847512	1.103272e-59	-8.615850e-47
Msa0647440	Msa1341750	0.808282	3.343855e-50	-8.615850e-47
Msa0653160	Msa1341750	0.842779	2.098989e-58	-8.615850e-47
Msa0655700	Msa1341750	0.810380	1.186130e-50	-8.615850e-47
Msa0660090	Msa1341750	0.840251	9.730454e-58	-8.615850e-47
Msa0660260	Msa1341750	0.802893	4.520025e-49	-8.615850e-47
Msa0687090	Msa1341750	0.806962	6.375212e-50	-8.615850e-47
Msa0688620	Msa1341750	0.804340	2.264241e-49	-8.615850e-47
Msa0690320	Msa1341750	0.824065	9.877959e-54	-8.615850e-47
Msa0695560	Msa1341750	0.853257	2.693342e-61	-8.615850e-47
Msa0706150	Msa1341750	0.844249	8.496768e-59	-8.615850e-47
Msa0708020	Msa1341750	0.813268	2.789400e-51	-8.615850e-47
Msa0749190	Msa1341750	0.802501	5.444564e-49	-8.615850e-47
Msa0750520	Msa1341750	0.806870	6.666095e-50	-8.615850e-47
Msa0132700	Msa1341750	0.811181	7.958699e-51	-8.615850e-47
Msa0134830	Msa1341750	0.828976	6.662072e-55	-8.615850e-47
Msa0161930	Msa1341750	0.814995	1.159452e-51	-8.615850e-47
Msa0173380	Msa1341750	0.864516	1.149913e-64	-8.615850e-47
Msa0179670	Msa1341750	0.812395	4.331903e-51	-8.615850e-47
Msa0181880	Msa1341750	0.813078	3.070245e-51	-8.615850e-47
Msa0191570	Msa1341750	0.801893	7.263490e-49	-8.615850e-47
Msa0214210	Msa1341750	0.830011	3.734197e-55	-8.615850e-47
Msa0221180	Msa1341750	0.812957	3.263495e-51	-8.615850e-47
Msa1228630	Msa1341750	0.847174	1.366770e-59	-8.615850e-47
Msa1242130	Msa1341750	0.818831	1.596317e-52	-8.615850e-47
Msa1250610	Msa1341750	0.807761	4.315433e-50	-8.615850e-47
Msa1267930	Msa1341750	0.800062	1.718715e-48	-8.615850e-47
Msa1283960	Msa1341750	0.834674	2.614429e-56	-8.615850e-47
Msa1299980	Msa1341750	0.827819	1.267202e-54	-8.615850e-47
Msa1326640	Msa1341750	0.812050	5.151982e-51	-8.615850e-47
Msa1326680	Msa1341750	0.812237	4.690887e-51	-8.615850e-47
Msa1331650	Msa1341750	0.802917	4.468860e-49	-8.615850e-47
Msa1333500	Msa1341750	0.806866	6.679156e-50	-8.615850e-47
Msa1341750	Msa1342810	0.826341	2.860410e-54	-8.615850e-47
Msa1341750	Msa1349850	-0.808254	3.390454e-50	-8.615850e-47
Msa1341750	Msa1356220	0.828862	7.099124e-55	-8.615850e-47
Msa1341750	Msa1356450	0.815404	9.404852e-52	-8.615850e-47
Msa1341750	Msa1357070	0.813762	2.172016e-51	-8.615850e-47
Msa1341750	Msa1362590	0.805903	1.065977e-49	-8.615850e-47
Msa1341750	Msa1381800	0.801588	8.389695e-49	-8.615850e-47
Msa1341750	Msa1406720	0.830112	3.527122e-55	-8.615850e-47
Msa1341750	Msa1410160	0.817267	3.602925e-52	-8.615850e-47
Msa1341750	Msa1417370	0.807225	5.609216e-50	-8.615850e-47
Msa1341750	Msa1417930	0.978459	7.202166e-146	-8.615850e-47
Msa1341750	Msa1450290	0.821200	4.580997e-53	-8.615850e-47
Msa1341750	Msa1456040	0.813845	2.082508e-51	-8.615850e-47
Msa0380540	Msa1341750	0.800514	1.390952e-48	-8.615850e-47
Msa0383560	Msa1341750	0.824450	8.017794e-54	-8.615850e-47
Msa0384870	Msa1341750	0.824662	7.150080e-54	-8.615850e-47
Msa0394500	Msa1341750	0.827245	1.740029e-54	-8.615850e-47
Msa0420430	Msa1341750	0.811413	7.090121e-51	-8.615850e-47
Msa0420680	Msa1341750	0.849708	2.718541e-60	-8.615850e-47
Msa0430080	Msa1341750	0.809869	1.528580e-50	-8.615850e-47
Msa0430170	Msa1341750	0.805121	1.555311e-49	-8.615850e-47
Msa0432200	Msa1341750	0.804420	2.178692e-49	-8.615850e-47
Msa0432690	Msa1341750	0.812811	3.513096e-51	-8.615850e-47
Msa0434090	Msa1341750	0.817682	2.906014e-52	-8.615850e-47
Msa0442090	Msa1341750	0.825431	4.706455e-54	-8.615850e-47
Msa0455970	Msa1341750	0.801792	7.617524e-49	-8.615850e-47
Msa0464050	Msa1341750	0.807015	6.212829e-50	-8.615850e-47
Msa0466520	Msa1341750	0.834332	3.186711e-56	-8.615850e-47
Msa1033420	Msa1341750	0.873460	1.445371e-67	-8.615850e-47
Msa1034960	Msa1341750	0.830150	3.453963e-55	-8.615850e-47
Msa1042300	Msa1341750	0.819577	1.079424e-52	-8.615850e-47
Msa1046120	Msa1341750	0.866952	1.956535e-65	-8.615850e-47
Msa1071410	Msa1341750	0.804858	1.765690e-49	-8.615850e-47
Msa1073060	Msa1341750	0.860472	2.016598e-63	-8.615850e-47
Msa1079640	Msa1341750	0.802994	4.308041e-49	-8.615850e-47
Msa1091050	Msa1341750	0.875372	3.246635e-68	-8.615850e-47
Msa0262750	Msa1341750	0.819335	1.225733e-52	-8.615850e-47
Msa0278840	Msa1341750	0.831596	1.525938e-55	-8.615850e-47
Msa0284800	Msa1341750	0.826319	2.895600e-54	-8.615850e-47
Msa0300470	Msa1341750	0.816682	4.877158e-52	-8.615850e-47
Msa0318620	Msa1341750	0.806366	8.516714e-50	-8.615850e-47
Msa0336520	Msa1341750	0.802023	6.828958e-49	-8.615850e-47
Msa0337970	Msa1341750	0.802724	4.897678e-49	-8.615850e-47
Msa0347780	Msa1341750	0.812867	3.416397e-51	-8.615850e-47
Msa1115610	Msa1341750	-0.809097	2.239397e-50	-8.615850e-47
Msa1130780	Msa1341750	0.978795	1.405829e-146	-8.615850e-47
Msa1131150	Msa1341750	0.837337	5.517573e-57	-8.615850e-47
Msa1133970	Msa1341750	0.867753	1.084621e-65	-8.615850e-47
Msa1134040	Msa1341750	0.868568	5.928050e-66	-8.615850e-47
Msa1144990	Msa1341750	0.801383	9.240879e-49	-8.615850e-47
Msa1160780	Msa1341750	0.844838	5.898929e-59	-8.615850e-47
Msa1166190	Msa1341750	0.820450	6.815434e-53	-8.615850e-47
Msa1166290	Msa1341750	0.829713	4.414142e-55	-8.615850e-47
Msa1194290	Msa1341750	0.813132	2.987959e-51	-8.615850e-47
Msa1209320	Msa1341750	0.808822	2.564404e-50	-8.615850e-47
Msa1212920	Msa1341750	0.802243	6.153924e-49	-8.615850e-47
Msa0486460	Msa1341750	0.811731	6.045987e-51	-8.615850e-47
Msa0506920	Msa1341750	0.804803	1.812832e-49	-8.615850e-47
Msa0512520	Msa1341750	0.834691	2.589428e-56	-8.615850e-47
Msa0513080	Msa1341750	0.813671	2.274842e-51	-8.615850e-47
Msa0521060	Msa1341750	0.816391	5.665783e-52	-8.615850e-47
Msa0521320	Msa1341750	0.805342	1.397870e-49	-8.615850e-47
Msa0548350	Msa1341750	0.804778	1.834437e-49	-8.615850e-47
Msa0557850	Msa1341750	0.863339	2.671641e-64	-8.615850e-47
Msa0562350	Msa1341750	0.827295	1.693253e-54	-8.615850e-47
Msa0564980	Msa1341750	0.804466	2.131833e-49	-8.615850e-47
Msa0570010	Msa1341750	0.835403	1.712364e-56	-8.615850e-47
Msa0571350	Msa1341750	0.806866	6.679156e-50	-8.615850e-47
Msa0574660	Msa1341750	0.809432	1.897527e-50	-8.615850e-47
Msa0575710	Msa1341750	0.805415	1.349705e-49	-8.615850e-47
Msa0576330	Msa1341750	0.802471	5.522171e-49	-8.615850e-47
Msa0856220	Msa1341750	0.821937	3.095447e-53	-8.615850e-47
Msa0876630	Msa1341750	0.810422	1.161784e-50	-8.615850e-47
Msa0930950	Msa1341750	-0.808770	2.630402e-50	-8.615850e-47
Msa0965470	Msa1341750	0.804136	2.496785e-49	-8.615850e-47
Msa0978980	Msa1341750	0.812623	3.861671e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1341750	MtrunA17_Chr8g0345591	72.881	236	56	2	1	228	83	318	1.63e-127	364
Msa1341750	MtrunA17_Chr7g0276501	92.308	104	6	1	142	243	6	109	6.55e-66	199
Msa1341750	MtrunA17_Chr7g0276511	87.129	101	13	0	1	101	77	177	1.38e-60	188
Msa1341750	MtrunA17_Chr8g0392901	34.444	180	100	7	55	225	87	257	9.24e-15	72.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1341750	AT2G46890.1	66.116	242	74	2	1	234	76	317	9.80e-119	342
Msa1341750	AT1G18180.2	33.171	205	114	8	28	221	61	253	1.92e-15	74.3
Msa1341750	AT1G18180.1	32.683	205	115	8	28	221	61	253	1.96e-15	74.7
Msa1341750	AT1G73650.2	32.258	217	129	9	28	236	61	267	8.77e-13	67.0
Msa1341750	AT1G73650.3	32.258	217	129	9	28	236	61	267	8.98e-13	67.0
Msa1341750	AT1G73650.5	32.258	217	129	9	28	236	61	267	9.49e-13	66.6
Msa1341750	AT1G73650.4	35.099	151	89	5	94	236	36	185	1.94e-12	65.1
Msa1341750	AT1G73650.1	35.099	151	89	5	94	236	36	185	1.98e-12	64.7

Find 119 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTTTGGCTCACTATGATTTC+TGG	0.120398	tig0004839:+16651	Msa1341750:CDS
TGCAGATGATTGACCCTTAT+TGG	0.153787	tig0004839:+16585	Msa1341750:intron
GGGCATGGGTGGACCTTTAT+AGG	0.223333	tig0004839:+17118	Msa1341750:CDS
AGAAAAGGAGATTGACTAAT+AGG	0.224743	tig0004839:-16391	None:intergenic
TACTGAGTGGATAACATAAA+AGG	0.250782	tig0004839:-16879	None:intergenic
TGGTGGGGACTTGTAGTATT+TGG	0.269007	tig0004839:+17085	Msa1341750:CDS
CATTCTTTGTTCCACAAGTT+TGG	0.288006	tig0004839:-17176	None:intergenic
GCTGTTGTTGTGTGTGTATC+TGG	0.295142	tig0004839:+16932	Msa1341750:CDS
ACTGATATGATTCAACAATA+TGG	0.297749	tig0004839:+16782	Msa1341750:CDS
TCAACGTCAATATCCTCTTT+TGG	0.304991	tig0004839:+16417	Msa1341750:five_prime_UTR
ACAGGTATCACTGTCCAATA+AGG	0.308159	tig0004839:-16599	None:intergenic
ATTGCTCAACACAATGTGTT+TGG	0.338794	tig0004839:+17144	Msa1341750:CDS
TTACCTATGTAAAAGATATA+TGG	0.338865	tig0004839:-17467	None:intergenic
GAACGCTGTGATAGCATTCT+TGG	0.342436	tig0004839:+16274	Msa1341750:five_prime_UTR
TTGGTTGGAACTTGGGGCAT+GGG	0.350925	tig0004839:+17104	Msa1341750:CDS
TAAATCAGCCTTTGAACATC+TGG	0.357916	tig0004839:+16900	Msa1341750:CDS
AGCTGCTCACCAAAGTAATT+AGG	0.361585	tig0004839:-17058	None:intergenic
GGAAGGCAGAAACAAATTAA+AGG	0.362728	tig0004839:+16203	Msa1341750:five_prime_UTR
CCTCACCAGTTATTGCTCAT+TGG	0.368116	tig0004839:+16845	Msa1341750:CDS
AAGGGTGGGCTGCATAATAA+TGG	0.377206	tig0004839:-16631	None:intergenic
TGTAGTATTTGGTTGGAACT+TGG	0.385747	tig0004839:+17096	Msa1341750:CDS
TTATTATGCAGCCCACCCTT+TGG	0.386930	tig0004839:+16634	Msa1341750:CDS
TTGCTCAACACAATGTGTTT+GGG	0.407007	tig0004839:+17145	Msa1341750:CDS
CACAGCGTTCTTCAAATTGC+TGG	0.420935	tig0004839:-16261	None:intergenic
TTTGGTTGGAACTTGGGGCA+TGG	0.421477	tig0004839:+17103	Msa1341750:CDS
GTAGTATTTGGTTGGAACTT+GGG	0.421705	tig0004839:+17097	Msa1341750:CDS
ACAAAAGAGTAGAAGCATAT+AGG	0.425663	tig0004839:+17209	Msa1341750:CDS
TACTCCACACCCAAGTCAAC+AGG	0.431420	tig0004839:-16691	None:intergenic
GCCTTTGAACATCTGGGACT+TGG	0.435472	tig0004839:+16907	Msa1341750:CDS
AATGGGGTGCAAGGGAAGAT+TGG	0.438963	tig0004839:+16753	Msa1341750:CDS
GAACGAGAGGTAGAAGAGAA+TGG	0.441376	tig0004839:-16309	None:intergenic
CTCTAATCCAATCCAGCCAC+TGG	0.444547	tig0004839:+16447	Msa1341750:five_prime_UTR
TTTGTGAATAACAATGGTAA+TGG	0.445517	tig0004839:+16995	Msa1341750:CDS
TATTGACGTTGAAGAAGAAA+AGG	0.446845	tig0004839:-16406	None:intergenic
ACAATCCAATGAGCAATAAC+TGG	0.447606	tig0004839:-16850	None:intergenic
TAGTATTTGGTTGGAACTTG+GGG	0.450578	tig0004839:+17098	Msa1341750:CDS
GTTGGAACTTGGGGCATGGG+TGG	0.451857	tig0004839:+17107	Msa1341750:CDS
AGGTAGGTAGATGGAGAAGA+AGG	0.452132	tig0004839:-16825	None:intergenic
GTTGAGCAATGCTCCTATAA+AGG	0.453733	tig0004839:-17131	None:intergenic
TACCCACCCAGTGGCTGGAT+TGG	0.456487	tig0004839:-16454	None:intergenic
ATTACTTTGGTGAGCAGCTA+TGG	0.459668	tig0004839:+17062	Msa1341750:CDS
GGGGACTTGTAGTATTTGGT+TGG	0.460375	tig0004839:+17089	Msa1341750:CDS
ATCAAATGTCAGGCGATTCA+AGG	0.469130	tig0004839:-17718	None:intergenic
ACTCGGCATCCTAATTACTT+TGG	0.476296	tig0004839:+17049	Msa1341750:CDS
TGGGAAAATTTGCCTTGTCC+CGG	0.476990	tig0004839:+17681	Msa1341750:three_prime_UTR
CTTATTTATATTCAACTTGG+TGG	0.477890	tig0004839:+17378	Msa1341750:three_prime_UTR
TAGAAGAGAATGGAGGGAAG+AGG	0.478736	tig0004839:-16299	None:intergenic
CAGACGAGAGAAGTGGCAAT+GGG	0.479915	tig0004839:+16736	Msa1341750:CDS
AAGGAGATTGACTAATAGGA+GGG	0.480012	tig0004839:-16387	None:intergenic
AGAAATCTCACGAAGGCATC+GGG	0.484762	tig0004839:-17608	None:intergenic
GACTAATTCTCCATATTACA+TGG	0.487679	tig0004839:+17661	Msa1341750:three_prime_UTR
ACTATGATTTCTGGAGATCA+AGG	0.489125	tig0004839:+16660	Msa1341750:CDS
TGGTGAGCAGCTATGGTGGT+GGG	0.489748	tig0004839:+17069	Msa1341750:CDS
TAACTGGTGAGGTAGGTAGA+TGG	0.495738	tig0004839:-16834	None:intergenic
ATCAGAACACAACTTCTGTA+TGG	0.498222	tig0004839:+17236	Msa1341750:CDS
ACTGAGTGGATAACATAAAA+GGG	0.503941	tig0004839:-16878	None:intergenic
CGAGAGGTAGAAGAGAATGG+AGG	0.504128	tig0004839:-16306	None:intergenic
TTGGTGAGCAGCTATGGTGG+TGG	0.505228	tig0004839:+17068	Msa1341750:CDS
CAGGTATCACTGTCCAATAA+GGG	0.506881	tig0004839:-16598	None:intergenic
TAGAAAGAGAAGGATGGATC+AGG	0.507693	tig0004839:-17317	None:intergenic
AGATGAGTTGAACTTGAAGC+AGG	0.514693	tig0004839:-17263	None:intergenic
AGAAGTGGCAATGGGGTGCA+AGG	0.516645	tig0004839:+16744	Msa1341750:CDS
TTATTTATATTCAACTTGGT+GGG	0.519183	tig0004839:+17379	Msa1341750:three_prime_UTR
GAGAGGTAGAAGAGAATGGA+GGG	0.519208	tig0004839:-16305	None:intergenic
GCATTCTTAGTTTGTTTGAG+TGG	0.520858	tig0004839:-17295	None:intergenic
AACAATATGGAAAACATTGG+TGG	0.523523	tig0004839:+16795	Msa1341750:CDS
GAGAAATCTCACGAAGGCAT+CGG	0.528908	tig0004839:-17609	None:intergenic
TGATCCTTGAGAGTGGTTTG+TGG	0.530278	tig0004839:+17020	Msa1341750:CDS
CAAGGTAGAGAGTTCAAAGC+CGG	0.538320	tig0004839:-17700	None:intergenic
GGTCAATCGATTTGTTCGTC+CGG	0.539211	tig0004839:-17748	None:intergenic
AATATGGAAAACATTGGTGG+TGG	0.539715	tig0004839:+16798	Msa1341750:CDS
AAAGGAGATTGACTAATAGG+AGG	0.543649	tig0004839:-16388	None:intergenic
CGGTGAGTAGATCAAATGTC+AGG	0.545124	tig0004839:-17728	None:intergenic
TAATAATGGACAAGCATCAC+AGG	0.547440	tig0004839:-16617	None:intergenic
TCACTTATTTATATTCAACT+TGG	0.550101	tig0004839:+17375	Msa1341750:three_prime_UTR
GGTGAGCAGCTATGGTGGTG+GGG	0.554190	tig0004839:+17070	Msa1341750:CDS
TGATCCTGTTGACTTGGGTG+TGG	0.558189	tig0004839:+16687	Msa1341750:CDS
GGGTTATGTGACCAAACTTG+TGG	0.558732	tig0004839:+17165	Msa1341750:CDS
GAGAGTTCAAAGCCGGGACA+AGG	0.561086	tig0004839:-17693	None:intergenic
GGATAGTGATCCTGTTGACT+TGG	0.567382	tig0004839:+16681	Msa1341750:CDS
CAGAAATCATAGTGAGCCAA+AGG	0.576012	tig0004839:-16650	None:intergenic
TCTCTCGTCTGAAGTAGTTG+TGG	0.584105	tig0004839:-16724	None:intergenic
AAATCAGCCTTTGAACATCT+GGG	0.586715	tig0004839:+16901	Msa1341750:CDS
ACCAAGTCCCAGATGTTCAA+AGG	0.590896	tig0004839:-16908	None:intergenic
GATGAGTTGAACTTGAAGCA+GGG	0.598199	tig0004839:-17262	None:intergenic
TGAGCAATAACTGGTGAGGT+AGG	0.598678	tig0004839:-16841	None:intergenic
GCTATAATATATAAATAAAG+CGG	0.602549	tig0004839:+16182	None:intergenic
AGAAATCATAGTGAGCCAAA+GGG	0.603318	tig0004839:-16649	None:intergenic
GGAGATTGACTAATAGGAGG+GGG	0.603415	tig0004839:-16385	None:intergenic
GAAGTGGCAATGGGGTGCAA+GGG	0.603591	tig0004839:+16745	Msa1341750:CDS
TCTAATCCAATCCAGCCACT+GGG	0.603829	tig0004839:+16448	Msa1341750:five_prime_UTR
ATCATAGTGAGCCAAAGGGT+GGG	0.605285	tig0004839:-16645	None:intergenic
TTCAACAATATGGAAAACAT+TGG	0.608096	tig0004839:+16792	Msa1341750:CDS
TCAGACGAGAGAAGTGGCAA+TGG	0.611058	tig0004839:+16735	Msa1341750:CDS
ATGAGTTGAACTTGAAGCAG+GGG	0.615221	tig0004839:-17261	None:intergenic
AATCATAGTGAGCCAAAGGG+TGG	0.615234	tig0004839:-16646	None:intergenic
TAATATATAAATAAAGCGGA+AGG	0.620826	tig0004839:+16186	None:intergenic
AAGGTAGAGAGTTCAAAGCC+GGG	0.622225	tig0004839:-17699	None:intergenic
GAATACTGAAACATGAACAT+GGG	0.622349	tig0004839:+16233	Msa1341750:five_prime_UTR
AGTACCACAAACCACTCTCA+AGG	0.625195	tig0004839:-17024	None:intergenic
ATATGGAAAACATTGGTGGT+GGG	0.626188	tig0004839:+16799	Msa1341750:CDS
TCAAAGGCTGATTTACTGAG+TGG	0.626720	tig0004839:-16892	None:intergenic
GTGGTTTGTGGTACTATACT+CGG	0.626740	tig0004839:+17032	Msa1341750:CDS
TATTATTATTAATGAACGAG+AGG	0.629432	tig0004839:-16322	None:intergenic
TTAGAGCGATGAGCCAAAAG+AGG	0.630992	tig0004839:-16430	None:intergenic
ACTACTTCAGACGAGAGAAG+TGG	0.633464	tig0004839:+16729	Msa1341750:CDS
ACTAATTCTCCATATTACAT+GGG	0.634875	tig0004839:+17662	Msa1341750:three_prime_UTR
AGGAGATTGACTAATAGGAG+GGG	0.636049	tig0004839:-16386	None:intergenic
GATAGTGATCCTGTTGACTT+GGG	0.636502	tig0004839:+16682	Msa1341750:CDS
CCAATGAGCAATAACTGGTG+AGG	0.640552	tig0004839:-16845	None:intergenic
TGAATACTGAAACATGAACA+TGG	0.641645	tig0004839:+16232	Msa1341750:five_prime_UTR
GTAATATGGAGAATTAGTCA+TGG	0.652216	tig0004839:-17657	None:intergenic
ACTTTGGTGAGCAGCTATGG+TGG	0.658770	tig0004839:+17065	Msa1341750:CDS
CTGACATTTGATCTACTCAC+CGG	0.671441	tig0004839:+17729	Msa1341750:three_prime_UTR
TATCTGCAAAGTATGCTATG+AGG	0.672642	tig0004839:-16958	None:intergenic
AATGGTATGATCCTTGAGAG+TGG	0.682971	tig0004839:+17013	Msa1341750:CDS
AATACTGAAACATGAACATG+GGG	0.698309	tig0004839:+16234	Msa1341750:five_prime_UTR
AGACGAGAGAAGTGGCAATG+GGG	0.720125	tig0004839:+16737	Msa1341750:CDS
TAGTGAGAGAAATCTCACGA+AGG	0.755280	tig0004839:-17615	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATTATTATTAATGAACGAG+AGG	-	tig0004839:16325-16344	None:intergenic	20.0%
!!!	TACAATTTTGTGAATAACAA+TGG	+	tig0004839:16989-17008	Msa1341750:CDS	20.0%
!!	TCACTTATTTATATTCAACT+TGG	+	tig0004839:17375-17394	Msa1341750:three_prime_UTR	20.0%
!!	TTATTTATATTCAACTTGGT+GGG	+	tig0004839:17379-17398	Msa1341750:three_prime_UTR	20.0%
!!!	TAAAATCGTAATTCTTTTTC+TGG	+	tig0004839:17406-17425	Msa1341750:three_prime_UTR	20.0%
!!!	TTTCCATATATCTTTTACAT+AGG	+	tig0004839:17464-17483	Msa1341750:three_prime_UTR	20.0%
!!	TTACCTATGTAAAAGATATA+TGG	-	tig0004839:17470-17489	None:intergenic	20.0%
!!	TATTATTATTAATGAACGAG+AGG	-	tig0004839:16325-16344	None:intergenic	20.0%
!!!	TACAATTTTGTGAATAACAA+TGG	+	tig0004839:16989-17008	Msa1341750:CDS	20.0%
!!	TCACTTATTTATATTCAACT+TGG	+	tig0004839:17375-17394	Msa1341750:three_prime_UTR	20.0%
!!	TTATTTATATTCAACTTGGT+GGG	+	tig0004839:17379-17398	Msa1341750:three_prime_UTR	20.0%
!!!	TAAAATCGTAATTCTTTTTC+TGG	+	tig0004839:17406-17425	Msa1341750:three_prime_UTR	20.0%
!!!	TTTCCATATATCTTTTACAT+AGG	+	tig0004839:17464-17483	Msa1341750:three_prime_UTR	20.0%
!!	TTACCTATGTAAAAGATATA+TGG	-	tig0004839:17470-17489	None:intergenic	20.0%
!	AGTTAGAAGTGATTAAAGAA+AGG	-	tig0004839:16499-16518	None:intergenic	25.0%
!	ACTGATATGATTCAACAATA+TGG	+	tig0004839:16782-16801	Msa1341750:CDS	25.0%
!	TTCAACAATATGGAAAACAT+TGG	+	tig0004839:16792-16811	Msa1341750:CDS	25.0%
!	TTTGTGAATAACAATGGTAA+TGG	+	tig0004839:16995-17014	Msa1341750:CDS	25.0%
!	AAAAAATAGAAAGAGAAGGA+TGG	-	tig0004839:17326-17345	None:intergenic	25.0%
!	CAACAAAAAATAGAAAGAGA+AGG	-	tig0004839:17330-17349	None:intergenic	25.0%
!	CTTATTTATATTCAACTTGG+TGG	+	tig0004839:17378-17397	Msa1341750:three_prime_UTR	25.0%
!	ACTAATTCTCCATATTACAT+GGG	+	tig0004839:17662-17681	Msa1341750:three_prime_UTR	25.0%
!	AGTTAGAAGTGATTAAAGAA+AGG	-	tig0004839:16499-16518	None:intergenic	25.0%
!	ACTGATATGATTCAACAATA+TGG	+	tig0004839:16782-16801	Msa1341750:CDS	25.0%
!	TTCAACAATATGGAAAACAT+TGG	+	tig0004839:16792-16811	Msa1341750:CDS	25.0%
!	TTTGTGAATAACAATGGTAA+TGG	+	tig0004839:16995-17014	Msa1341750:CDS	25.0%
!	AAAAAATAGAAAGAGAAGGA+TGG	-	tig0004839:17326-17345	None:intergenic	25.0%
!	CAACAAAAAATAGAAAGAGA+AGG	-	tig0004839:17330-17349	None:intergenic	25.0%
!	CTTATTTATATTCAACTTGG+TGG	+	tig0004839:17378-17397	Msa1341750:three_prime_UTR	25.0%
!	ACTAATTCTCCATATTACAT+GGG	+	tig0004839:17662-17681	Msa1341750:three_prime_UTR	25.0%
	TGAATACTGAAACATGAACA+TGG	+	tig0004839:16232-16251	Msa1341750:five_prime_UTR	30.0%
	GAATACTGAAACATGAACAT+GGG	+	tig0004839:16233-16252	Msa1341750:five_prime_UTR	30.0%
	AATACTGAAACATGAACATG+GGG	+	tig0004839:16234-16253	Msa1341750:five_prime_UTR	30.0%
	AGAAAAGGAGATTGACTAAT+AGG	-	tig0004839:16394-16413	None:intergenic	30.0%
	TATTGACGTTGAAGAAGAAA+AGG	-	tig0004839:16409-16428	None:intergenic	30.0%
	AAAGAAAGGAAGAAGAGATA+GGG	-	tig0004839:16485-16504	None:intergenic	30.0%
	TAAAGAAAGGAAGAAGAGAT+AGG	-	tig0004839:16486-16505	None:intergenic	30.0%
	AACAATATGGAAAACATTGG+TGG	+	tig0004839:16795-16814	Msa1341750:CDS	30.0%
	ACTGAGTGGATAACATAAAA+GGG	-	tig0004839:16881-16900	None:intergenic	30.0%
	TACTGAGTGGATAACATAAA+AGG	-	tig0004839:16882-16901	None:intergenic	30.0%
!	ACAAAAGAGTAGAAGCATAT+AGG	+	tig0004839:17209-17228	Msa1341750:CDS	30.0%
	GTAATATGGAGAATTAGTCA+TGG	-	tig0004839:17660-17679	None:intergenic	30.0%
	GACTAATTCTCCATATTACA+TGG	+	tig0004839:17661-17680	Msa1341750:three_prime_UTR	30.0%
!	GCAAATTTTCCCATGTAATA+TGG	-	tig0004839:17674-17693	None:intergenic	30.0%
	TGAATACTGAAACATGAACA+TGG	+	tig0004839:16232-16251	Msa1341750:five_prime_UTR	30.0%
	GAATACTGAAACATGAACAT+GGG	+	tig0004839:16233-16252	Msa1341750:five_prime_UTR	30.0%
	AATACTGAAACATGAACATG+GGG	+	tig0004839:16234-16253	Msa1341750:five_prime_UTR	30.0%
	AGAAAAGGAGATTGACTAAT+AGG	-	tig0004839:16394-16413	None:intergenic	30.0%
	TATTGACGTTGAAGAAGAAA+AGG	-	tig0004839:16409-16428	None:intergenic	30.0%
	AAAGAAAGGAAGAAGAGATA+GGG	-	tig0004839:16485-16504	None:intergenic	30.0%
	TAAAGAAAGGAAGAAGAGAT+AGG	-	tig0004839:16486-16505	None:intergenic	30.0%
	AACAATATGGAAAACATTGG+TGG	+	tig0004839:16795-16814	Msa1341750:CDS	30.0%
	ACTGAGTGGATAACATAAAA+GGG	-	tig0004839:16881-16900	None:intergenic	30.0%
	TACTGAGTGGATAACATAAA+AGG	-	tig0004839:16882-16901	None:intergenic	30.0%
!	ACAAAAGAGTAGAAGCATAT+AGG	+	tig0004839:17209-17228	Msa1341750:CDS	30.0%
	GTAATATGGAGAATTAGTCA+TGG	-	tig0004839:17660-17679	None:intergenic	30.0%
	GACTAATTCTCCATATTACA+TGG	+	tig0004839:17661-17680	Msa1341750:three_prime_UTR	30.0%
!	GCAAATTTTCCCATGTAATA+TGG	-	tig0004839:17674-17693	None:intergenic	30.0%
	GGAAGGCAGAAACAAATTAA+AGG	+	tig0004839:16203-16222	Msa1341750:five_prime_UTR	35.0%
	AAGGAGATTGACTAATAGGA+GGG	-	tig0004839:16390-16409	None:intergenic	35.0%
	AAAGGAGATTGACTAATAGG+AGG	-	tig0004839:16391-16410	None:intergenic	35.0%
!	TCAACGTCAATATCCTCTTT+TGG	+	tig0004839:16417-16436	Msa1341750:five_prime_UTR	35.0%
!!	TAATAATGGACAAGCATCAC+AGG	-	tig0004839:16620-16639	None:intergenic	35.0%
	AGAAATCATAGTGAGCCAAA+GGG	-	tig0004839:16652-16671	None:intergenic	35.0%
!	ACTATGATTTCTGGAGATCA+AGG	+	tig0004839:16660-16679	Msa1341750:CDS	35.0%
	AATATGGAAAACATTGGTGG+TGG	+	tig0004839:16798-16817	Msa1341750:CDS	35.0%
!	ATATGGAAAACATTGGTGGT+GGG	+	tig0004839:16799-16818	Msa1341750:CDS	35.0%
	ACAATCCAATGAGCAATAAC+TGG	-	tig0004839:16853-16872	None:intergenic	35.0%
	TAAATCAGCCTTTGAACATC+TGG	+	tig0004839:16900-16919	Msa1341750:CDS	35.0%
	AAATCAGCCTTTGAACATCT+GGG	+	tig0004839:16901-16920	Msa1341750:CDS	35.0%
	TATCTGCAAAGTATGCTATG+AGG	-	tig0004839:16961-16980	None:intergenic	35.0%
	TGTAGTATTTGGTTGGAACT+TGG	+	tig0004839:17096-17115	Msa1341750:CDS	35.0%
	GTAGTATTTGGTTGGAACTT+GGG	+	tig0004839:17097-17116	Msa1341750:CDS	35.0%
	TAGTATTTGGTTGGAACTTG+GGG	+	tig0004839:17098-17117	Msa1341750:CDS	35.0%
	ATTGCTCAACACAATGTGTT+TGG	+	tig0004839:17144-17163	Msa1341750:CDS	35.0%
	TTGCTCAACACAATGTGTTT+GGG	+	tig0004839:17145-17164	Msa1341750:CDS	35.0%
	CATTCTTTGTTCCACAAGTT+TGG	-	tig0004839:17179-17198	None:intergenic	35.0%
	ATCAGAACACAACTTCTGTA+TGG	+	tig0004839:17236-17255	Msa1341750:CDS	35.0%
!!	GCATTCTTAGTTTGTTTGAG+TGG	-	tig0004839:17298-17317	None:intergenic	35.0%
	GGAAGGCAGAAACAAATTAA+AGG	+	tig0004839:16203-16222	Msa1341750:five_prime_UTR	35.0%
	AAGGAGATTGACTAATAGGA+GGG	-	tig0004839:16390-16409	None:intergenic	35.0%
	AAAGGAGATTGACTAATAGG+AGG	-	tig0004839:16391-16410	None:intergenic	35.0%
!	TCAACGTCAATATCCTCTTT+TGG	+	tig0004839:16417-16436	Msa1341750:five_prime_UTR	35.0%
!!	TAATAATGGACAAGCATCAC+AGG	-	tig0004839:16620-16639	None:intergenic	35.0%
	AGAAATCATAGTGAGCCAAA+GGG	-	tig0004839:16652-16671	None:intergenic	35.0%
!	ACTATGATTTCTGGAGATCA+AGG	+	tig0004839:16660-16679	Msa1341750:CDS	35.0%
	AATATGGAAAACATTGGTGG+TGG	+	tig0004839:16798-16817	Msa1341750:CDS	35.0%
!	ATATGGAAAACATTGGTGGT+GGG	+	tig0004839:16799-16818	Msa1341750:CDS	35.0%
	ACAATCCAATGAGCAATAAC+TGG	-	tig0004839:16853-16872	None:intergenic	35.0%
	TAAATCAGCCTTTGAACATC+TGG	+	tig0004839:16900-16919	Msa1341750:CDS	35.0%
	AAATCAGCCTTTGAACATCT+GGG	+	tig0004839:16901-16920	Msa1341750:CDS	35.0%
	TATCTGCAAAGTATGCTATG+AGG	-	tig0004839:16961-16980	None:intergenic	35.0%
	TGTAGTATTTGGTTGGAACT+TGG	+	tig0004839:17096-17115	Msa1341750:CDS	35.0%
	GTAGTATTTGGTTGGAACTT+GGG	+	tig0004839:17097-17116	Msa1341750:CDS	35.0%
	TAGTATTTGGTTGGAACTTG+GGG	+	tig0004839:17098-17117	Msa1341750:CDS	35.0%
	ATTGCTCAACACAATGTGTT+TGG	+	tig0004839:17144-17163	Msa1341750:CDS	35.0%
	TTGCTCAACACAATGTGTTT+GGG	+	tig0004839:17145-17164	Msa1341750:CDS	35.0%
	CATTCTTTGTTCCACAAGTT+TGG	-	tig0004839:17179-17198	None:intergenic	35.0%
	ATCAGAACACAACTTCTGTA+TGG	+	tig0004839:17236-17255	Msa1341750:CDS	35.0%
!!	GCATTCTTAGTTTGTTTGAG+TGG	-	tig0004839:17298-17317	None:intergenic	35.0%
	AGGAGATTGACTAATAGGAG+GGG	-	tig0004839:16389-16408	None:intergenic	40.0%
	AAAGGAAGAAGAGATAGGGA+GGG	-	tig0004839:16481-16500	None:intergenic	40.0%
	TGCAGATGATTGACCCTTAT+TGG	+	tig0004839:16585-16604	Msa1341750:intron	40.0%
	CAGGTATCACTGTCCAATAA+GGG	-	tig0004839:16601-16620	None:intergenic	40.0%
	ACAGGTATCACTGTCCAATA+AGG	-	tig0004839:16602-16621	None:intergenic	40.0%
	CAGAAATCATAGTGAGCCAA+AGG	-	tig0004839:16653-16672	None:intergenic	40.0%
!	CTTTGGCTCACTATGATTTC+TGG	+	tig0004839:16651-16670	Msa1341750:CDS	40.0%
!!	GATAGTGATCCTGTTGACTT+GGG	+	tig0004839:16682-16701	Msa1341750:CDS	40.0%
!	TCAAAGGCTGATTTACTGAG+TGG	-	tig0004839:16895-16914	None:intergenic	40.0%
	AATGGTATGATCCTTGAGAG+TGG	+	tig0004839:17013-17032	Msa1341750:CDS	40.0%
!	GTGGTTTGTGGTACTATACT+CGG	+	tig0004839:17032-17051	Msa1341750:CDS	40.0%
	ACTCGGCATCCTAATTACTT+TGG	+	tig0004839:17049-17068	Msa1341750:CDS	40.0%
	AGCTGCTCACCAAAGTAATT+AGG	-	tig0004839:17061-17080	None:intergenic	40.0%
	ATTACTTTGGTGAGCAGCTA+TGG	+	tig0004839:17062-17081	Msa1341750:CDS	40.0%
	GTTGAGCAATGCTCCTATAA+AGG	-	tig0004839:17134-17153	None:intergenic	40.0%
!	ATGAGTTGAACTTGAAGCAG+GGG	-	tig0004839:17264-17283	None:intergenic	40.0%
!	GATGAGTTGAACTTGAAGCA+GGG	-	tig0004839:17265-17284	None:intergenic	40.0%
!	AGATGAGTTGAACTTGAAGC+AGG	-	tig0004839:17266-17285	None:intergenic	40.0%
	TAGAAAGAGAAGGATGGATC+AGG	-	tig0004839:17320-17339	None:intergenic	40.0%
	TAGTGAGAGAAATCTCACGA+AGG	-	tig0004839:17618-17637	None:intergenic	40.0%
	ATCAAATGTCAGGCGATTCA+AGG	-	tig0004839:17721-17740	None:intergenic	40.0%
	CTGACATTTGATCTACTCAC+CGG	+	tig0004839:17729-17748	Msa1341750:three_prime_UTR	40.0%
	AGGAGATTGACTAATAGGAG+GGG	-	tig0004839:16389-16408	None:intergenic	40.0%
	AAAGGAAGAAGAGATAGGGA+GGG	-	tig0004839:16481-16500	None:intergenic	40.0%
	TGCAGATGATTGACCCTTAT+TGG	+	tig0004839:16585-16604	Msa1341750:intron	40.0%
	CAGGTATCACTGTCCAATAA+GGG	-	tig0004839:16601-16620	None:intergenic	40.0%
	ACAGGTATCACTGTCCAATA+AGG	-	tig0004839:16602-16621	None:intergenic	40.0%
	CAGAAATCATAGTGAGCCAA+AGG	-	tig0004839:16653-16672	None:intergenic	40.0%
!	CTTTGGCTCACTATGATTTC+TGG	+	tig0004839:16651-16670	Msa1341750:CDS	40.0%
!!	GATAGTGATCCTGTTGACTT+GGG	+	tig0004839:16682-16701	Msa1341750:CDS	40.0%
!	TCAAAGGCTGATTTACTGAG+TGG	-	tig0004839:16895-16914	None:intergenic	40.0%
	AATGGTATGATCCTTGAGAG+TGG	+	tig0004839:17013-17032	Msa1341750:CDS	40.0%
!	GTGGTTTGTGGTACTATACT+CGG	+	tig0004839:17032-17051	Msa1341750:CDS	40.0%
	ACTCGGCATCCTAATTACTT+TGG	+	tig0004839:17049-17068	Msa1341750:CDS	40.0%
	AGCTGCTCACCAAAGTAATT+AGG	-	tig0004839:17061-17080	None:intergenic	40.0%
	ATTACTTTGGTGAGCAGCTA+TGG	+	tig0004839:17062-17081	Msa1341750:CDS	40.0%
	GTTGAGCAATGCTCCTATAA+AGG	-	tig0004839:17134-17153	None:intergenic	40.0%
!	ATGAGTTGAACTTGAAGCAG+GGG	-	tig0004839:17264-17283	None:intergenic	40.0%
!	GATGAGTTGAACTTGAAGCA+GGG	-	tig0004839:17265-17284	None:intergenic	40.0%
!	AGATGAGTTGAACTTGAAGC+AGG	-	tig0004839:17266-17285	None:intergenic	40.0%
	TAGAAAGAGAAGGATGGATC+AGG	-	tig0004839:17320-17339	None:intergenic	40.0%
	TAGTGAGAGAAATCTCACGA+AGG	-	tig0004839:17618-17637	None:intergenic	40.0%
	ATCAAATGTCAGGCGATTCA+AGG	-	tig0004839:17721-17740	None:intergenic	40.0%
	CTGACATTTGATCTACTCAC+CGG	+	tig0004839:17729-17748	Msa1341750:three_prime_UTR	40.0%
	CACAGCGTTCTTCAAATTGC+TGG	-	tig0004839:16264-16283	None:intergenic	45.0%
	GAACGCTGTGATAGCATTCT+TGG	+	tig0004839:16274-16293	Msa1341750:five_prime_UTR	45.0%
	TAGAAGAGAATGGAGGGAAG+AGG	-	tig0004839:16302-16321	None:intergenic	45.0%
	GAGAGGTAGAAGAGAATGGA+GGG	-	tig0004839:16308-16327	None:intergenic	45.0%
	GAACGAGAGGTAGAAGAGAA+TGG	-	tig0004839:16312-16331	None:intergenic	45.0%
	GGAGATTGACTAATAGGAGG+GGG	-	tig0004839:16388-16407	None:intergenic	45.0%
	TTAGAGCGATGAGCCAAAAG+AGG	-	tig0004839:16433-16452	None:intergenic	45.0%
	TCTAATCCAATCCAGCCACT+GGG	+	tig0004839:16448-16467	Msa1341750:five_prime_UTR	45.0%
	GAAAGGAAGAAGAGATAGGG+AGG	-	tig0004839:16482-16501	None:intergenic	45.0%
!!	AAGGGTGGGCTGCATAATAA+TGG	-	tig0004839:16634-16653	None:intergenic	45.0%
	TTATTATGCAGCCCACCCTT+TGG	+	tig0004839:16634-16653	Msa1341750:CDS	45.0%
	ATCATAGTGAGCCAAAGGGT+GGG	-	tig0004839:16648-16667	None:intergenic	45.0%
	AATCATAGTGAGCCAAAGGG+TGG	-	tig0004839:16649-16668	None:intergenic	45.0%
!	GGATAGTGATCCTGTTGACT+TGG	+	tig0004839:16681-16700	Msa1341750:CDS	45.0%
!	TCTCTCGTCTGAAGTAGTTG+TGG	-	tig0004839:16727-16746	None:intergenic	45.0%
	ACTACTTCAGACGAGAGAAG+TGG	+	tig0004839:16729-16748	Msa1341750:CDS	45.0%
	AGGTAGGTAGATGGAGAAGA+AGG	-	tig0004839:16828-16847	None:intergenic	45.0%
	TAACTGGTGAGGTAGGTAGA+TGG	-	tig0004839:16837-16856	None:intergenic	45.0%
	TGAGCAATAACTGGTGAGGT+AGG	-	tig0004839:16844-16863	None:intergenic	45.0%
	CCAATGAGCAATAACTGGTG+AGG	-	tig0004839:16848-16867	None:intergenic	45.0%
	CCTCACCAGTTATTGCTCAT+TGG	+	tig0004839:16845-16864	Msa1341750:CDS	45.0%
	ACCAAGTCCCAGATGTTCAA+AGG	-	tig0004839:16911-16930	None:intergenic	45.0%
	GCTGTTGTTGTGTGTGTATC+TGG	+	tig0004839:16932-16951	Msa1341750:CDS	45.0%
	TGATCCTTGAGAGTGGTTTG+TGG	+	tig0004839:17020-17039	Msa1341750:CDS	45.0%
	AGTACCACAAACCACTCTCA+AGG	-	tig0004839:17027-17046	None:intergenic	45.0%
	TGGTGGGGACTTGTAGTATT+TGG	+	tig0004839:17085-17104	Msa1341750:CDS	45.0%
	GGGGACTTGTAGTATTTGGT+TGG	+	tig0004839:17089-17108	Msa1341750:CDS	45.0%
	GGGTTATGTGACCAAACTTG+TGG	+	tig0004839:17165-17184	Msa1341750:CDS	45.0%
!!	AGAAATCTCACGAAGGCATC+GGG	-	tig0004839:17611-17630	None:intergenic	45.0%
!	GAGAAATCTCACGAAGGCAT+CGG	-	tig0004839:17612-17631	None:intergenic	45.0%
	TGGGAAAATTTGCCTTGTCC+CGG	+	tig0004839:17681-17700	Msa1341750:three_prime_UTR	45.0%
	AAGGTAGAGAGTTCAAAGCC+GGG	-	tig0004839:17702-17721	None:intergenic	45.0%
	CAAGGTAGAGAGTTCAAAGC+CGG	-	tig0004839:17703-17722	None:intergenic	45.0%
	CGGTGAGTAGATCAAATGTC+AGG	-	tig0004839:17731-17750	None:intergenic	45.0%
!!	GGTCAATCGATTTGTTCGTC+CGG	-	tig0004839:17751-17770	None:intergenic	45.0%
	CACAGCGTTCTTCAAATTGC+TGG	-	tig0004839:16264-16283	None:intergenic	45.0%
	GAACGCTGTGATAGCATTCT+TGG	+	tig0004839:16274-16293	Msa1341750:five_prime_UTR	45.0%
	TAGAAGAGAATGGAGGGAAG+AGG	-	tig0004839:16302-16321	None:intergenic	45.0%
	GAGAGGTAGAAGAGAATGGA+GGG	-	tig0004839:16308-16327	None:intergenic	45.0%
	GAACGAGAGGTAGAAGAGAA+TGG	-	tig0004839:16312-16331	None:intergenic	45.0%
	GGAGATTGACTAATAGGAGG+GGG	-	tig0004839:16388-16407	None:intergenic	45.0%
	TTAGAGCGATGAGCCAAAAG+AGG	-	tig0004839:16433-16452	None:intergenic	45.0%
	TCTAATCCAATCCAGCCACT+GGG	+	tig0004839:16448-16467	Msa1341750:five_prime_UTR	45.0%
	GAAAGGAAGAAGAGATAGGG+AGG	-	tig0004839:16482-16501	None:intergenic	45.0%
!!	AAGGGTGGGCTGCATAATAA+TGG	-	tig0004839:16634-16653	None:intergenic	45.0%
	TTATTATGCAGCCCACCCTT+TGG	+	tig0004839:16634-16653	Msa1341750:CDS	45.0%
	ATCATAGTGAGCCAAAGGGT+GGG	-	tig0004839:16648-16667	None:intergenic	45.0%
	AATCATAGTGAGCCAAAGGG+TGG	-	tig0004839:16649-16668	None:intergenic	45.0%
!	GGATAGTGATCCTGTTGACT+TGG	+	tig0004839:16681-16700	Msa1341750:CDS	45.0%
!	TCTCTCGTCTGAAGTAGTTG+TGG	-	tig0004839:16727-16746	None:intergenic	45.0%
	ACTACTTCAGACGAGAGAAG+TGG	+	tig0004839:16729-16748	Msa1341750:CDS	45.0%
	AGGTAGGTAGATGGAGAAGA+AGG	-	tig0004839:16828-16847	None:intergenic	45.0%
	TAACTGGTGAGGTAGGTAGA+TGG	-	tig0004839:16837-16856	None:intergenic	45.0%
	TGAGCAATAACTGGTGAGGT+AGG	-	tig0004839:16844-16863	None:intergenic	45.0%
	CCAATGAGCAATAACTGGTG+AGG	-	tig0004839:16848-16867	None:intergenic	45.0%
	CCTCACCAGTTATTGCTCAT+TGG	+	tig0004839:16845-16864	Msa1341750:CDS	45.0%
	ACCAAGTCCCAGATGTTCAA+AGG	-	tig0004839:16911-16930	None:intergenic	45.0%
	GCTGTTGTTGTGTGTGTATC+TGG	+	tig0004839:16932-16951	Msa1341750:CDS	45.0%
	TGATCCTTGAGAGTGGTTTG+TGG	+	tig0004839:17020-17039	Msa1341750:CDS	45.0%
	AGTACCACAAACCACTCTCA+AGG	-	tig0004839:17027-17046	None:intergenic	45.0%
	TGGTGGGGACTTGTAGTATT+TGG	+	tig0004839:17085-17104	Msa1341750:CDS	45.0%
	GGGGACTTGTAGTATTTGGT+TGG	+	tig0004839:17089-17108	Msa1341750:CDS	45.0%
	GGGTTATGTGACCAAACTTG+TGG	+	tig0004839:17165-17184	Msa1341750:CDS	45.0%
!!	AGAAATCTCACGAAGGCATC+GGG	-	tig0004839:17611-17630	None:intergenic	45.0%
!	GAGAAATCTCACGAAGGCAT+CGG	-	tig0004839:17612-17631	None:intergenic	45.0%
	TGGGAAAATTTGCCTTGTCC+CGG	+	tig0004839:17681-17700	Msa1341750:three_prime_UTR	45.0%
	AAGGTAGAGAGTTCAAAGCC+GGG	-	tig0004839:17702-17721	None:intergenic	45.0%
	CAAGGTAGAGAGTTCAAAGC+CGG	-	tig0004839:17703-17722	None:intergenic	45.0%
	CGGTGAGTAGATCAAATGTC+AGG	-	tig0004839:17731-17750	None:intergenic	45.0%
!!	GGTCAATCGATTTGTTCGTC+CGG	-	tig0004839:17751-17770	None:intergenic	45.0%
	CGAGAGGTAGAAGAGAATGG+AGG	-	tig0004839:16309-16328	None:intergenic	50.0%
	GATTGACTAATAGGAGGGGG+TGG	-	tig0004839:16385-16404	None:intergenic	50.0%
	CTCTAATCCAATCCAGCCAC+TGG	+	tig0004839:16447-16466	Msa1341750:five_prime_UTR	50.0%
!!	TGATCCTGTTGACTTGGGTG+TGG	+	tig0004839:16687-16706	Msa1341750:CDS	50.0%
	TACTCCACACCCAAGTCAAC+AGG	-	tig0004839:16694-16713	None:intergenic	50.0%
	TCAGACGAGAGAAGTGGCAA+TGG	+	tig0004839:16735-16754	Msa1341750:CDS	50.0%
	CAGACGAGAGAAGTGGCAAT+GGG	+	tig0004839:16736-16755	Msa1341750:CDS	50.0%
	AGACGAGAGAAGTGGCAATG+GGG	+	tig0004839:16737-16756	Msa1341750:CDS	50.0%
	AATGGGGTGCAAGGGAAGAT+TGG	+	tig0004839:16753-16772	Msa1341750:CDS	50.0%
!	GCCTTTGAACATCTGGGACT+TGG	+	tig0004839:16907-16926	Msa1341750:CDS	50.0%
	ACTTTGGTGAGCAGCTATGG+TGG	+	tig0004839:17065-17084	Msa1341750:CDS	50.0%
	TTTGGTTGGAACTTGGGGCA+TGG	+	tig0004839:17103-17122	Msa1341750:CDS	50.0%
	TTGGTTGGAACTTGGGGCAT+GGG	+	tig0004839:17104-17123	Msa1341750:CDS	50.0%
	CGAGAGGTAGAAGAGAATGG+AGG	-	tig0004839:16309-16328	None:intergenic	50.0%
	GATTGACTAATAGGAGGGGG+TGG	-	tig0004839:16385-16404	None:intergenic	50.0%
	CTCTAATCCAATCCAGCCAC+TGG	+	tig0004839:16447-16466	Msa1341750:five_prime_UTR	50.0%
!!	TGATCCTGTTGACTTGGGTG+TGG	+	tig0004839:16687-16706	Msa1341750:CDS	50.0%
	TACTCCACACCCAAGTCAAC+AGG	-	tig0004839:16694-16713	None:intergenic	50.0%
	TCAGACGAGAGAAGTGGCAA+TGG	+	tig0004839:16735-16754	Msa1341750:CDS	50.0%
	CAGACGAGAGAAGTGGCAAT+GGG	+	tig0004839:16736-16755	Msa1341750:CDS	50.0%
	AGACGAGAGAAGTGGCAATG+GGG	+	tig0004839:16737-16756	Msa1341750:CDS	50.0%
	AATGGGGTGCAAGGGAAGAT+TGG	+	tig0004839:16753-16772	Msa1341750:CDS	50.0%
!	GCCTTTGAACATCTGGGACT+TGG	+	tig0004839:16907-16926	Msa1341750:CDS	50.0%
	ACTTTGGTGAGCAGCTATGG+TGG	+	tig0004839:17065-17084	Msa1341750:CDS	50.0%
	TTTGGTTGGAACTTGGGGCA+TGG	+	tig0004839:17103-17122	Msa1341750:CDS	50.0%
	TTGGTTGGAACTTGGGGCAT+GGG	+	tig0004839:17104-17123	Msa1341750:CDS	50.0%
	GCGATAGCAGAATGGGTGAG+TGG	-	tig0004839:16363-16382	None:intergenic	55.0%
	AATCCAATCCAGCCACTGGG+TGG	+	tig0004839:16451-16470	Msa1341750:intron	55.0%
	ATCCAATCCAGCCACTGGGT+GGG	+	tig0004839:16452-16471	Msa1341750:intron	55.0%
	AGAAGTGGCAATGGGGTGCA+AGG	+	tig0004839:16744-16763	Msa1341750:CDS	55.0%
	GAAGTGGCAATGGGGTGCAA+GGG	+	tig0004839:16745-16764	Msa1341750:CDS	55.0%
	TTGGTGAGCAGCTATGGTGG+TGG	+	tig0004839:17068-17087	Msa1341750:CDS	55.0%
	TGGTGAGCAGCTATGGTGGT+GGG	+	tig0004839:17069-17088	Msa1341750:CDS	55.0%
	GGGCATGGGTGGACCTTTAT+AGG	+	tig0004839:17118-17137	Msa1341750:CDS	55.0%
	GAGAGTTCAAAGCCGGGACA+AGG	-	tig0004839:17696-17715	None:intergenic	55.0%
	GCGATAGCAGAATGGGTGAG+TGG	-	tig0004839:16363-16382	None:intergenic	55.0%
	AATCCAATCCAGCCACTGGG+TGG	+	tig0004839:16451-16470	Msa1341750:intron	55.0%
	ATCCAATCCAGCCACTGGGT+GGG	+	tig0004839:16452-16471	Msa1341750:intron	55.0%
	AGAAGTGGCAATGGGGTGCA+AGG	+	tig0004839:16744-16763	Msa1341750:CDS	55.0%
	GAAGTGGCAATGGGGTGCAA+GGG	+	tig0004839:16745-16764	Msa1341750:CDS	55.0%
	TTGGTGAGCAGCTATGGTGG+TGG	+	tig0004839:17068-17087	Msa1341750:CDS	55.0%
	TGGTGAGCAGCTATGGTGGT+GGG	+	tig0004839:17069-17088	Msa1341750:CDS	55.0%
	GGGCATGGGTGGACCTTTAT+AGG	+	tig0004839:17118-17137	Msa1341750:CDS	55.0%
	GAGAGTTCAAAGCCGGGACA+AGG	-	tig0004839:17696-17715	None:intergenic	55.0%
	GGGGGTGGCGATAGCAGAAT+GGG	-	tig0004839:16370-16389	None:intergenic	60.0%
	AGGGGGTGGCGATAGCAGAA+TGG	-	tig0004839:16371-16390	None:intergenic	60.0%
	TACCCACCCAGTGGCTGGAT+TGG	-	tig0004839:16457-16476	None:intergenic	60.0%
!	GGTGAGCAGCTATGGTGGTG+GGG	+	tig0004839:17070-17089	Msa1341750:CDS	60.0%
	GTTGGAACTTGGGGCATGGG+TGG	+	tig0004839:17107-17126	Msa1341750:CDS	60.0%
	GGGGGTGGCGATAGCAGAAT+GGG	-	tig0004839:16370-16389	None:intergenic	60.0%
	AGGGGGTGGCGATAGCAGAA+TGG	-	tig0004839:16371-16390	None:intergenic	60.0%
	TACCCACCCAGTGGCTGGAT+TGG	-	tig0004839:16457-16476	None:intergenic	60.0%
!	GGTGAGCAGCTATGGTGGTG+GGG	+	tig0004839:17070-17089	Msa1341750:CDS	60.0%
	GTTGGAACTTGGGGCATGGG+TGG	+	tig0004839:17107-17126	Msa1341750:CDS	60.0%
	AGGGATACCCACCCAGTGGC+TGG	-	tig0004839:16462-16481	None:intergenic	65.0%
	AGGGAGGGATACCCACCCAG+TGG	-	tig0004839:16466-16485	None:intergenic	65.0%
	AGGGATACCCACCCAGTGGC+TGG	-	tig0004839:16462-16481	None:intergenic	65.0%
	AGGGAGGGATACCCACCCAG+TGG	-	tig0004839:16466-16485	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
tig0004839	gene	16197	17780	16197	ID=Msa1341750;Name=Msa1341750
tig0004839	mRNA	16197	17780	16197	ID=Msa1341750-mRNA-1;Parent=Msa1341750;Name=Msa1341750-mRNA-1;_AED=0.04;_eAED=0.04;_QI=251\|1\|1\|1\|0.5\|0.33\|3\|459\|243
tig0004839	exon	16197	16341	16197	ID=Msa1341750-mRNA-1:exon:3302;Parent=Msa1341750-mRNA-1
tig0004839	exon	16364	16469	16364	ID=Msa1341750-mRNA-1:exon:3303;Parent=Msa1341750-mRNA-1
tig0004839	exon	16590	17780	16590	ID=Msa1341750-mRNA-1:exon:3304;Parent=Msa1341750-mRNA-1
tig0004839	five_prime_UTR	16197	16341	16197	ID=Msa1341750-mRNA-1:five_prime_utr;Parent=Msa1341750-mRNA-1
tig0004839	five_prime_UTR	16364	16469	16364	ID=Msa1341750-mRNA-1:five_prime_utr;Parent=Msa1341750-mRNA-1
tig0004839	CDS	16590	17321	16590	ID=Msa1341750-mRNA-1:cds;Parent=Msa1341750-mRNA-1
tig0004839	three_prime_UTR	17322	17780	17322	ID=Msa1341750-mRNA-1:three_prime_utr;Parent=Msa1341750-mRNA-1

Gene Sequence

>Msa1341750

ATGATTGACCCTTATTGGACAGTGATACCTGTGATGCTTGTCCATTATTATGCAGCCCACCCTTTGGCTCACTATGATTTCTGGAGATCAAGGATAGTGATCCTGTTGACTTGGGTGTGGAGTATTAGACTCATCCACAACTACTTCAGACGAGAGAAGTGGCAATGGGGTGCAAGGGAAGATTGGCGTTTCACTGATATGATTCAACAATATGGAAAACATTGGTGGTGGGCTTCCTTCTTCTCCATCTACCTACCTCACCAGTTATTGCTCATTGGATTGTCACTTCCCTTTTATGTTATCCACTCAGTAAATCAGCCTTTGAACATCTGGGACTTGGTAGCTGTTGTTGTGTGTGTATCTGGCATCCTCATAGCATACTTTGCAGATAATCAGCTTTACAATTTTGTGAATAACAATGGTAATGGTATGATCCTTGAGAGTGGTTTGTGGTACTATACTCGGCATCCTAATTACTTTGGTGAGCAGCTATGGTGGTGGGGACTTGTAGTATTTGGTTGGAACTTGGGGCATGGGTGGACCTTTATAGGAGCATTGCTCAACACAATGTGTTTGGGTTATGTGACCAAACTTGTGGAACAAAGAATGTTGAAACAAGACAAAAGAGTAGAAGCATATAGGAAGTATCAGAACACAACTTCTGTATGGATCCCCTGCTTCAAGTTCAACTCATCTGCTAATTTACCACTCAAACAAACTAAGAATGCCTGA

Protein sequence

>Msa1341750

MIDPYWTVIPVMLVHYYAAHPLAHYDFWRSRIVILLTWVWSIRLIHNYFRREKWQWGAREDWRFTDMIQQYGKHWWWASFFSIYLPHQLLLIGLSLPFYVIHSVNQPLNIWDLVAVVVCVSGILIAYFADNQLYNFVNNNGNGMILESGLWYYTRHPNYFGEQLWWWGLVVFGWNLGHGWTFIGALLNTMCLGYVTKLVEQRMLKQDKRVEAYRKYQNTTSVWIPCFKFNSSANLPLKQTKNA*