AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0173380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0173380 MtrunA17_Chr1g0193131 86.888 633 31 1 1 581 1 633 0.0 967
Msa0173380 MtrunA17_Chr7g0271411 62.567 187 49 8 318 496 64 237 4.72e-51 177
Msa0173380 MtrunA17_Chr3g0096451 46.711 152 58 4 346 496 60 189 2.64e-33 128
Msa0173380 MtrunA17_Chr2g0304061 64.935 77 27 0 420 496 158 234 1.82e-28 116
Msa0173380 MtrunA17_Chr5g0443331 40.351 171 82 6 402 570 90 242 7.00e-27 110
Msa0173380 MtrunA17_Chr5g0401301 26.068 468 229 16 54 496 33 408 2.67e-26 111
Msa0173380 MtrunA17_Chr1g0177171 60.976 82 30 2 416 495 402 483 3.31e-25 109
Msa0173380 MtrunA17_Chr8g0381081 46.341 123 62 4 397 516 35 156 4.30e-25 102
Msa0173380 MtrunA17_Chr8g0378371 58.228 79 31 1 418 496 31 107 1.12e-23 96.3
Msa0173380 MtrunA17_Chr8g0380231 63.768 69 24 1 429 496 26 94 1.74e-22 92.4
Msa0173380 MtrunA17_Chr8g0378401 47.674 86 44 1 416 500 28 113 1.82e-22 92.8
Msa0173380 MtrunA17_Chr4g0075031 51.724 87 40 2 412 496 374 460 2.48e-22 100
Msa0173380 MtrunA17_Chr8g0378361 44.030 134 62 4 419 547 29 154 7.86e-22 93.2
Msa0173380 MtrunA17_Chr8g0378381 47.561 82 42 1 416 496 28 109 2.39e-21 89.7
Msa0173380 MtrunA17_Chr3g0120401 52.564 78 36 1 420 496 157 234 1.73e-20 90.9
Msa0173380 MtrunA17_Chr5g0439251 51.648 91 42 2 414 502 376 466 3.13e-20 94.0
Msa0173380 MtrunA17_Chr5g0419121 46.316 95 47 2 417 510 19 110 4.55e-20 90.1
Msa0173380 MtrunA17_Chr5g0447651 50.575 87 41 2 412 496 22 108 5.30e-20 85.9
Msa0173380 MtrunA17_Chr1g0154991 49.367 79 39 1 419 496 19 97 5.44e-19 82.8
Msa0173380 MtrunA17_Chr1g0213651 47.561 82 42 1 416 496 272 353 7.72e-19 88.6
Msa0173380 MtrunA17_Chr4g0076141 47.059 85 43 2 414 496 7 91 7.74e-19 82.0
Msa0173380 MtrunA17_Chr6g0487261 43.478 92 49 2 408 496 357 448 1.63e-18 89.0
Msa0173380 MtrunA17_Chr4g0061401 53.165 79 35 2 419 496 23 100 1.90e-18 84.3
Msa0173380 MtrunA17_Chr8g0378621 41.322 121 59 4 420 537 364 475 5.32e-18 87.4
Msa0173380 MtrunA17_Chr4g0043151 48.235 85 40 2 420 503 21 102 1.32e-17 81.3
Msa0173380 MtrunA17_Chr4g0043511 42.169 83 47 1 418 499 418 500 3.96e-17 84.7
Msa0173380 MtrunA17_Chr4g0040911 44.118 102 49 3 420 513 37 138 8.38e-17 78.6
Msa0173380 MtrunA17_Chr3g0121271 44.444 81 43 2 418 496 360 440 1.12e-16 83.2
Msa0173380 MtrunA17_Chr5g0434591 44.828 87 46 2 412 496 352 438 3.59e-16 81.6
Msa0173380 MtrunA17_Chr4g0076131 44.706 85 45 2 414 496 22 106 4.13e-16 74.7
Msa0173380 MtrunA17_Chr4g0034901 45.098 102 47 4 403 496 353 453 1.02e-15 80.1
Msa0173380 MtrunA17_Chr2g0313891 43.956 91 48 3 408 496 17 106 1.77e-15 72.8
Msa0173380 MtrunA17_Chr1g0161011 46.914 81 41 2 418 496 359 439 2.13e-15 79.0
Msa0173380 MtrunA17_Chr3g0110371 40.196 102 59 2 397 496 338 439 3.48e-15 78.6
Msa0173380 MtrunA17_Chr8g0389741 39.773 88 51 2 411 496 359 446 4.69e-15 78.2
Msa0173380 MtrunA17_Chr3g0144531 43.878 98 50 3 403 496 352 448 2.55e-14 75.5
Msa0173380 MtrunA17_Chr7g0223961 38.776 98 59 1 400 496 345 442 1.67e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0173380 AT1G09460.1 69.027 113 32 2 386 496 101 212 2.63e-38 144
Msa0173380 AT2G30933.2 43.846 130 41 2 368 496 61 159 4.00e-29 113
Msa0173380 AT2G30933.3 43.846 130 41 2 368 496 61 159 4.00e-29 113
Msa0173380 AT1G29380.4 66.667 78 25 1 420 496 148 225 1.10e-28 114
Msa0173380 AT1G29380.2 66.667 78 25 1 420 496 148 225 1.10e-28 114
Msa0173380 AT2G30933.1 43.846 130 41 2 368 496 61 159 1.53e-28 114
Msa0173380 AT1G29380.3 66.667 78 25 1 420 496 148 225 2.96e-28 114
Msa0173380 AT1G29380.1 66.667 78 25 1 420 496 148 225 4.09e-28 115
Msa0173380 AT2G05790.1 56.604 106 41 3 395 495 356 461 2.99e-26 112
Msa0173380 AT5G55180.2 55.814 86 36 2 413 496 365 450 1.20e-22 101
Msa0173380 AT5G55180.1 56.471 85 35 2 413 495 365 449 2.18e-22 100
Msa0173380 AT4G05430.1 45.455 99 52 2 400 496 3 101 2.42e-21 90.9
Msa0173380 AT4G26830.1 36.066 183 103 6 322 495 267 444 3.18e-21 97.4
Msa0173380 AT4G05430.3 45.098 102 54 2 397 496 25 126 4.54e-21 90.9
Msa0173380 AT4G26830.2 36.066 183 103 6 322 495 271 448 4.71e-21 96.7
Msa0173380 AT1G11820.3 53.086 81 36 2 418 496 379 459 6.65e-21 96.7
Msa0173380 AT1G11820.2 53.086 81 36 2 418 496 379 459 9.45e-21 96.3
Msa0173380 AT4G05430.2 45.098 102 54 2 397 496 25 126 9.65e-21 88.6
Msa0173380 AT3G55430.1 44.186 86 47 1 412 496 358 443 7.74e-20 92.8
Msa0173380 AT5G35740.1 50.588 85 39 3 415 496 25 109 1.14e-19 85.5
Msa0173380 AT4G13600.1 41.463 123 65 3 420 536 61 182 2.28e-19 87.8
Msa0173380 AT1G79480.1 51.282 78 37 1 420 496 311 388 2.46e-19 90.9
Msa0173380 AT1G79480.2 51.282 78 37 1 420 496 310 387 2.70e-19 90.9
Msa0173380 AT1G69295.1 51.765 85 36 3 419 502 20 100 3.56e-19 87.0
Msa0173380 AT1G69295.2 51.765 85 36 3 419 502 16 96 4.70e-19 86.7
Msa0173380 AT1G18650.2 47.561 82 42 1 419 499 20 101 5.28e-19 84.0
Msa0173380 AT1G18650.1 48.101 79 40 1 419 496 20 98 5.91e-19 85.5
Msa0173380 AT4G34480.3 48.101 79 40 1 419 496 252 330 7.85e-19 89.4
Msa0173380 AT4G34480.1 48.101 79 40 1 419 496 363 441 1.20e-18 89.7
Msa0173380 AT5G67460.2 37.013 154 78 5 354 496 226 371 3.54e-18 87.0
Msa0173380 AT5G67460.1 37.013 154 78 5 354 496 226 371 3.54e-18 87.0
Msa0173380 AT5G61130.1 48.101 79 40 1 419 496 20 98 6.53e-18 82.8
Msa0173380 AT1G26450.1 53.521 71 31 2 421 490 22 91 9.29e-18 82.4
Msa0173380 AT3G58100.1 47.674 86 43 2 416 499 37 122 2.80e-17 80.5
Msa0173380 AT2G42930.1 40.000 95 57 0 420 514 40 134 3.11e-17 79.0
Msa0173380 AT2G01630.3 46.914 81 41 2 418 496 358 438 4.16e-17 84.3
Msa0173380 AT2G01630.1 46.429 84 43 2 418 499 358 441 6.44e-17 84.3
Msa0173380 AT3G58100.2 48.780 82 40 2 420 499 117 198 7.17e-17 81.3
Msa0173380 AT5G08000.2 50.725 69 33 1 417 484 37 105 2.96e-16 78.6
Msa0173380 AT1G66250.1 44.048 84 45 2 418 499 366 449 4.01e-16 82.0
Msa0173380 AT2G16230.1 44.304 79 43 1 419 496 365 443 7.14e-16 80.9
Msa0173380 AT5G56590.1 46.835 79 40 2 420 496 369 447 1.58e-15 80.1
Msa0173380 AT5G24318.2 36.000 100 57 2 398 496 356 449 1.69e-15 79.7
Msa0173380 AT5G24318.3 36.000 100 57 2 398 496 217 310 2.08e-15 78.2
Msa0173380 AT5G08000.1 50.746 67 32 1 419 484 20 86 2.16e-15 75.5
Msa0173380 AT5G24318.1 36.000 100 57 2 398 496 356 449 2.23e-15 79.3
Msa0173380 AT3G13560.4 39.831 118 62 4 420 535 362 472 3.12e-15 79.0
Msa0173380 AT3G13560.1 39.831 118 62 4 420 535 362 472 3.12e-15 79.0
Msa0173380 AT3G13560.2 39.831 118 62 4 420 535 362 472 3.12e-15 79.0
Msa0173380 AT3G13560.5 39.831 118 62 4 420 535 362 472 3.12e-15 79.0
Msa0173380 AT3G13560.3 39.831 118 62 4 420 535 362 472 3.12e-15 79.0
Msa0173380 AT2G04910.2 41.667 84 47 2 415 496 10 93 4.47e-15 71.6
Msa0173380 AT4G29360.2 44.444 81 43 2 418 496 399 479 4.55e-15 78.6
Msa0173380 AT4G29360.1 44.444 81 43 2 418 496 389 469 5.21e-15 78.6
Msa0173380 AT3G23770.1 45.161 93 47 4 405 495 374 464 8.24e-15 77.4
Msa0173380 AT4G09090.1 48.485 66 33 1 420 484 31 96 9.26e-15 71.2
Msa0173380 AT1G66870.2 39.506 81 47 2 418 496 51 131 1.22e-14 71.6
Msa0173380 AT1G66870.1 39.506 81 47 2 418 496 24 104 1.37e-14 70.5
Msa0173380 AT4G09462.1 39.759 83 49 1 415 496 24 106 2.32e-14 70.1
Msa0173380 AT5G63225.1 41.176 85 49 1 413 496 18 102 2.82e-14 69.7
Msa0173380 AT1G13830.2 41.667 84 45 2 417 499 32 112 3.51e-14 72.4
Msa0173380 AT4G09465.1 38.554 83 50 1 415 496 26 108 4.13e-14 69.3
Msa0173380 AT1G66855.1 38.272 81 48 2 418 496 24 104 4.95e-14 68.9
Msa0173380 AT4G09464.1 38.554 83 50 1 415 496 26 108 5.32e-14 68.9
Msa0173380 AT4G09467.1 38.554 83 50 1 415 496 26 108 5.32e-14 68.9
Msa0173380 AT1G13830.1 41.975 81 43 2 420 499 21 98 5.80e-14 71.2
Msa0173380 AT1G66852.1 37.500 80 49 1 418 496 24 103 6.77e-14 68.6
Msa0173380 AT2G04910.1 41.667 84 47 2 415 496 10 93 7.00e-14 68.9
Msa0173380 AT1G78520.1 38.095 84 50 2 414 496 26 108 7.57e-14 68.6
Msa0173380 AT4G09466.1 38.554 83 50 1 415 496 26 108 1.23e-13 68.2
Msa0173380 AT5G63250.1 37.778 90 51 3 412 496 33 122 6.00e-13 66.6
Msa0173380 AT5G63240.1 34.043 94 58 2 407 496 27 120 2.12e-12 65.1
Msa0173380 AT5G63230.1 35.294 85 54 1 413 496 19 103 2.39e-12 64.3
Msa0173380 AT4G16165.1 37.037 81 49 2 418 496 24 104 3.39e-12 63.9
Msa0173380 AT5G53600.1 38.554 83 49 2 418 499 27 108 1.02e-11 62.4
Msa0173380 AT2G39640.1 35.789 95 54 2 406 499 351 439 1.33e-11 67.8
Msa0173380 AT2G39640.1 32.927 82 54 1 419 499 459 540 1.39e-11 67.8
Msa0173380 AT2G43660.2 40.000 90 50 4 409 496 26 113 1.43e-11 62.4
Msa0173380 AT2G43660.1 40.000 90 50 4 409 496 25 112 1.71e-11 62.0
Msa0173380 AT2G03505.3 32.967 91 60 1 419 508 20 110 3.17e-11 61.2
Msa0173380 AT2G29735.1 39.080 87 50 2 413 496 24 110 4.18e-11 60.8
Msa0173380 AT2G03505.4 32.967 91 60 1 419 508 20 110 7.84e-11 61.6
Msa0173380 AT2G03505.1 32.967 91 60 1 419 508 20 110 7.84e-11 61.6
Msa0173380 AT2G03505.2 32.967 91 60 1 419 508 20 110 7.84e-11 61.6

Find 156 sgRNAs with CRISPR-Local

Find 307 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATCGCCATCAGTGCTTTC+TGG 0.163697 1_4:-58616884 Msa0173390:three_prime_UTR
AATATATTCATTAAATTATC+AGG 0.166823 1_4:+58616855 Msa0173380:three_prime_UTR
TCAGGTACAATGCCAGATTT+TGG 0.194586 1_4:+58616257 Msa0173380:CDS
CCAACATCTTCAGGCACTTT+TGG 0.216484 1_4:+58616087 Msa0173380:CDS
CAATATATTATGGTCATTAT+TGG 0.244640 1_4:+58616582 Msa0173380:three_prime_UTR
TCACTTTCATGCAGGTTCTT+TGG 0.248475 1_4:+58613727 Msa0173380:intron
TCTCTCTTAATTTCATGTTC+TGG 0.269637 1_4:+58613631 Msa0173380:CDS
TAGATTACTTTCATTTATAA+AGG 0.277901 1_4:+58614183 Msa0173380:CDS
TGAGTGGGAGGGAGAGAAAA+AGG 0.282963 1_4:-58613466 None:intergenic
TACACGTAGGTGTATTCTTT+TGG 0.286474 1_4:-58616786 None:intergenic
TTAGGTTGTACAATATATTA+TGG 0.299298 1_4:+58616572 Msa0173380:three_prime_UTR
GGTGGAGCTGTTGGAATTGA+TGG 0.308099 1_4:-58616066 None:intergenic
AAGACTATACAGCCAGTAAA+AGG 0.355621 1_4:-58616338 None:intergenic
ATGAAGAAACTTTGCTCTGC+TGG 0.376113 1_4:-58613796 None:intergenic
GGAGGTGGATAAGATGTTAC+TGG 0.377508 1_4:-58614835 None:intergenic
ATGATAGAAGATAGCATTGA+TGG 0.377602 1_4:+58614223 Msa0173380:CDS
TAGCAAATAACTTTAGATAA+AGG 0.378208 1_4:-58613492 None:intergenic
CCTCCAAAGTCGCAACTTGT+TGG 0.380624 1_4:-58615114 None:intergenic
GGTGTAATGGTTGGAGTTGT+TGG 0.382964 1_4:-58614739 None:intergenic
GGCATTGCAGCTGGATTTGT+AGG 0.384777 1_4:-58614676 None:intergenic
TGTGGAAGGAACTGCTATAA+TGG 0.388341 1_4:-58614635 None:intergenic
TTAGTCAATGTAGTGTAAAT+TGG 0.391236 1_4:+58616664 Msa0173380:three_prime_UTR
AACTCAAGCAACCCAGCTTC+AGG 0.391337 1_4:+58616239 Msa0173380:CDS
TCAGTGTGATTGATATATAC+AGG 0.391997 1_4:-58613533 None:intergenic
GCTCCAACAAGTTGCGACTT+TGG 0.392668 1_4:+58615111 Msa0173380:CDS
GTCAGAGTTGTTATAATTTG+CGG 0.393355 1_4:+58616686 Msa0173380:three_prime_UTR
TACACAATACTCTCTGATAA+TGG 0.394136 1_4:+58613573 Msa0173380:exon
ATAACTGGTGTTGGATTTGT+AGG 0.394170 1_4:-58614592 None:intergenic
GCATGGTTCTGCAAAGTAAC+AGG 0.394899 1_4:-58615051 None:intergenic
GAGCTTTCGTCACAGATCAT+AGG 0.396108 1_4:+58613828 Msa0173380:CDS
CGAGTTACTTCTATTGAACT+TGG 0.401043 1_4:-58614364 None:intergenic
TTGGATTATGCTTGTGGAAA+TGG 0.401736 1_4:+58614985 Msa0173380:CDS
CTTCAATGAAAGAACTCAAA+AGG 0.413209 1_4:+58614467 Msa0173380:CDS
GTAGTTGAAGGAACTGTTAC+TGG 0.413784 1_4:-58614697 None:intergenic
GAAGGAGCATTTGTGTTTGA+AGG 0.413852 1_4:-58614898 None:intergenic
GTTGGAGTTGTTGGAGGTAA+AGG 0.413921 1_4:-58614730 None:intergenic
TTGAAGGAGGTGGCTGTTGA+GGG 0.417203 1_4:-58614882 None:intergenic
CATTACATGCTGCAGTGTTA+AGG 0.418204 1_4:+58616474 Msa0173380:three_prime_UTR
CACAAATGCTCCTTCTGCTC+AGG 0.420750 1_4:+58614906 Msa0173380:CDS
ACAGCTCCACCAACATCTTC+AGG 0.424830 1_4:+58616078 Msa0173380:CDS
ACCACTGGAACATTTCCTAA+TGG 0.424925 1_4:-58614856 None:intergenic
GGATAAGATGTTACTGGAGG+TGG 0.426667 1_4:-58614829 None:intergenic
GCCGATGTTGTGTTTACAAT+AGG 0.430103 1_4:-58616293 None:intergenic
ACTGTTACTGGCATTGCAGC+TGG 0.430772 1_4:-58614685 None:intergenic
TGATTGTTCTCAAATACAAC+AGG 0.433295 1_4:+58615011 Msa0173380:CDS
ACAACTCCTACAACAGTTCC+AGG 0.436358 1_4:+58614784 Msa0173380:CDS
ACATCTTATCCACCTCCATT+AGG 0.436623 1_4:+58614841 Msa0173380:CDS
GCACATGTGAAATGCTTTCA+AGG 0.438918 1_4:+58616937 Msa0173380:three_prime_UTR
CTTTCATGCAGGTTCTTTGG+TGG 0.439102 1_4:+58613730 Msa0173380:intron
GGAAATTGTGACAGGATTTG+TGG 0.439347 1_4:-58614653 None:intergenic
GGGCTATCAGACCCAAAATC+TGG 0.444861 1_4:-58616269 None:intergenic
CACCTATAGAGTTCAGAAAC+AGG 0.446988 1_4:+58616395 Msa0173380:exon
TTTCATGCAGGTTCTTTGGT+GGG 0.448012 1_4:+58613731 Msa0173380:intron
TTTGAAGGAGGTGGCTGTTG+AGG 0.448619 1_4:-58614883 None:intergenic
GGTGGAGCTGTTGACATTGT+TGG 0.450114 1_4:-58616045 None:intergenic
AGCTTCCCTTCAATCAGCAT+TGG 0.454325 1_4:+58614966 Msa0173380:CDS
AACTTCCTCAAGACTTGAAG+TGG 0.458266 1_4:-58614133 None:intergenic
AACCTGTTTCTGAACTCTAT+AGG 0.458686 1_4:-58616397 None:intergenic
CTGAGGCTTGCAGTGACAAA+TGG 0.467298 1_4:-58616368 None:intergenic
GCTGCAGTGTTAAGGACTAT+AGG 0.472092 1_4:+58616482 Msa0173380:three_prime_UTR
AGTTGGTGTGTGGCGAAAAC+AGG 0.475765 1_4:+58614934 Msa0173380:CDS
AGATAAAGGAGATGAGTGGG+AGG 0.477647 1_4:-58613478 None:intergenic
AAGTCGCAACTTGTTGGAGC+TGG 0.478203 1_4:-58615108 None:intergenic
GAGGCAGAAAGAAGCTTCCT+TGG 0.478234 1_4:-58613596 None:intergenic
TCTGGCATTGTACCTGAAGC+TGG 0.478959 1_4:-58616251 None:intergenic
GGTGCACCTGGAACTGTTGT+AGG 0.485248 1_4:-58614790 None:intergenic
GTAGGGTAAACTGTGTTTGT+TGG 0.486254 1_4:-58614574 None:intergenic
GGAGGTGGATAAGATGTTAC+TGG 0.487201 1_4:-58614814 None:intergenic
AGAATCAGCATCCAATGCAT+TGG 0.490685 1_4:-58616816 None:intergenic
GGCTGTTGAGGGTTTACCAC+TGG 0.491135 1_4:-58614871 None:intergenic
CATAATCCAATGCTGATTGA+AGG 0.493090 1_4:-58614972 None:intergenic
GATATAGAAGCACCTGTCAC+AGG 0.493200 1_4:-58616764 None:intergenic
TTTGTAGGGGAAATTGTGAC+AGG 0.494725 1_4:-58614661 None:intergenic
GGACTATAGGTGCAGAAAGA+AGG 0.496284 1_4:+58616495 Msa0173380:three_prime_UTR
TATCTAGAATATTTCTTCTG+TGG 0.496929 1_4:-58614540 None:intergenic
AAAATATTCTAAGCAGCTCA+TGG 0.499869 1_4:-58616551 None:intergenic
AGTGTCTCCTCTCTCATGAT+AGG 0.500543 1_4:-58613759 None:intergenic
GTATCTGAGGGTGTAATAAC+TGG 0.502389 1_4:-58614607 None:intergenic
GCATTGCAGCTGGATTTGTA+GGG 0.503176 1_4:-58614675 None:intergenic
GATGTTACTGGTGGTGCACC+TGG 0.511282 1_4:-58614802 None:intergenic
TTCAATGAAAGAACTCAAAA+GGG 0.511868 1_4:+58614468 Msa0173380:CDS
CTTGAGTTTAACACTGAAGG+TGG 0.514620 1_4:-58616224 None:intergenic
TCAGCATTGGATTATGCTTG+TGG 0.514748 1_4:+58614979 Msa0173380:CDS
GCATTTGTGTTTGAAGGAGG+TGG 0.517825 1_4:-58614892 None:intergenic
CTCTTGATTGTAAGAACCAC+AGG 0.520516 1_4:-58614331 None:intergenic
CATTTCCACTTCAAGTCTTG+AGG 0.520651 1_4:+58614128 Msa0173380:CDS
GGAGCATTTGTGTTTGAAGG+AGG 0.521515 1_4:-58614895 None:intergenic
GATAAAGGAGATGAGTGGGA+GGG 0.525948 1_4:-58613477 None:intergenic
GAAGACTGGTGCCGGTGTAA+TGG 0.528319 1_4:-58614752 None:intergenic
GATGTTGTGTTTACAATAGG+AGG 0.530245 1_4:-58616290 None:intergenic
CAACTCTGTCCCTGAGCAGA+AGG 0.531643 1_4:-58614916 None:intergenic
TCCTTGCAAAGATGTTCCTG+TGG 0.532621 1_4:+58614315 Msa0173380:CDS
CCAACAAGTTGCGACTTTGG+AGG 0.533263 1_4:+58615114 Msa0173380:CDS
GAAGATGTTGGTGGAGCTGT+TGG 0.534788 1_4:-58616075 None:intergenic
GGAACAGCAGGTGTAGTTGA+AGG 0.536488 1_4:-58614709 None:intergenic
GAAAGAACTCAAAAGGGAAG+AGG 0.546037 1_4:+58614474 Msa0173380:CDS
TTTAGATAAAGGAGATGAGT+GGG 0.547015 1_4:-58613481 None:intergenic
GGAACATTTCCTAATGGAGG+TGG 0.552963 1_4:-58614850 None:intergenic
GTTGGAGGTAAAGGAACAGC+AGG 0.553488 1_4:-58614721 None:intergenic
TGTAGCTTAATCCAATGCAT+TGG 0.557109 1_4:+58616805 Msa0173380:three_prime_UTR
GGAGCTGTTGACATTGTTGG+TGG 0.559801 1_4:-58616042 None:intergenic
ATATATTCATTAAATTATCA+GGG 0.562769 1_4:+58616856 Msa0173380:three_prime_UTR
GAGGGTGTAATAACTGGTGT+TGG 0.563477 1_4:-58614601 None:intergenic
ATAATCCAATGCTGATTGAA+GGG 0.564193 1_4:-58614971 None:intergenic
TTTAACTCGGAAACTGCTGA+AGG 0.564291 1_4:-58613935 None:intergenic
ACTGTTGTAGGAGTTGTAGC+TGG 0.566759 1_4:-58614778 None:intergenic
TTGAGTTTAACACTGAAGGT+GGG 0.573230 1_4:-58616223 None:intergenic
TCTCTACTTAAACAAAAGCC+AGG 0.575198 1_4:+58613889 Msa0173380:CDS
TAACTGGTGTTGGATTTGTA+GGG 0.580532 1_4:-58614591 None:intergenic
CTTCTGCTCAGGGACAGAGT+TGG 0.581714 1_4:+58614917 Msa0173380:CDS
TTGCTTGAGTTTAACACTGA+AGG 0.581994 1_4:-58616227 None:intergenic
CTTTAGATAAAGGAGATGAG+TGG 0.587004 1_4:-58613482 None:intergenic
TTAAGAGCATGCATAATCAA+AGG 0.588835 1_4:-58614046 None:intergenic
TTTCAGAGCTCGAGGGTGCG+AGG 0.590599 1_4:-58616315 None:intergenic
TATAATGGTTGGAGTATCTG+AGG 0.591925 1_4:-58614620 None:intergenic
GAAGGAACTGCTATAATGGT+TGG 0.591976 1_4:-58614631 None:intergenic
AAGATCTCTCTTCTAGACAA+AGG 0.594620 1_4:-58614508 None:intergenic
ATACTCTCTGATAATGGCCA+AGG 0.605015 1_4:+58613579 Msa0173380:exon
GTAATGGTTGGAGTTGTTGG+AGG 0.606112 1_4:-58614736 None:intergenic
ATCATGAGAGAGGAGACACT+TGG 0.607322 1_4:+58613762 Msa0173380:CDS
GTAAAAGGTTTCAGAGCTCG+AGG 0.607544 1_4:-58616323 None:intergenic
TGAGTTTAACACTGAAGGTG+GGG 0.608299 1_4:-58616222 None:intergenic
ATGTTGTGTTTACAATAGGA+GGG 0.618672 1_4:-58616289 None:intergenic
GTTGTAGCTGGATTGAAGAC+TGG 0.620005 1_4:-58614766 None:intergenic
ACAAATGCTCCTTCTGCTCA+GGG 0.620260 1_4:+58614907 Msa0173380:CDS
GGTACTCTATACCCTGTGAC+AGG 0.620454 1_4:+58616752 Msa0173380:three_prime_UTR
ATTGTGACAGGATTTGTGGA+AGG 0.620979 1_4:-58614649 None:intergenic
TTAACTCGGAAACTGCTGAA+GGG 0.622484 1_4:-58613934 None:intergenic
AGAGAGAAGAGAGAAACAAG+AGG 0.623621 1_4:-58613615 None:intergenic
GCTGGATTGAAGACTGGTGC+CGG 0.624496 1_4:-58614760 None:intergenic
AACAACTCCAACCATTACAC+CGG 0.624559 1_4:+58614741 Msa0173380:CDS
GGAGCTGTTGGAATTGATGG+TGG 0.624833 1_4:-58616063 None:intergenic
ACTGGTGCCGGTGTAATGGT+TGG 0.625957 1_4:-58614748 None:intergenic
CTGGCATTGTACCTGAAGCT+GGG 0.626526 1_4:-58616250 None:intergenic
CAGTGATCTTCACATAAGCA+AGG 0.629071 1_4:+58614087 Msa0173380:CDS
ACCACAGGAACATCTTTGCA+AGG 0.631919 1_4:-58614316 None:intergenic
AACTCTATAGGTGCATGCTG+AGG 0.632489 1_4:-58616385 None:intergenic
CATTGCAGCTGGATTTGTAG+GGG 0.635434 1_4:-58614674 None:intergenic
GAACTCAAAAGGGAAGAGGA+AGG 0.639773 1_4:+58614478 Msa0173380:CDS
CCAAAAGTGCCTGAAGATGT+TGG 0.642640 1_4:-58616087 None:intergenic
TGTTGAAGGCAAAAGAAGCA+TGG 0.645483 1_4:-58615068 None:intergenic
ATATAGAAGCACCTGTCACA+GGG 0.656563 1_4:-58616763 None:intergenic
TCCATTAGGAAATGTTCCAG+TGG 0.658091 1_4:+58614855 Msa0173380:CDS
ACTGGAACATTTCCTAATGG+AGG 0.658231 1_4:-58614853 None:intergenic
GAGTAGTGTGATGATCCGAA+TGG 0.661571 1_4:-58616422 None:intergenic
GCTGATTGAAGGGAAGCTTG+TGG 0.661755 1_4:-58614961 None:intergenic
TAAAAGGTTTCAGAGCTCGA+GGG 0.668012 1_4:-58616322 None:intergenic
TCCTATTGTAAACACAACAT+CGG 0.678848 1_4:+58616292 Msa0173380:CDS
CAGAAGCAGCAAGATTAGCG+CGG 0.682382 1_4:-58614288 None:intergenic
AAAGTGCCTGAAGATGTTGG+TGG 0.686382 1_4:-58616084 None:intergenic
ATAATGGTTGGAGTATCTGA+GGG 0.698374 1_4:-58614619 None:intergenic
TCAGGGACAGAGTTGGTGTG+TGG 0.715688 1_4:+58614924 Msa0173380:CDS
GGTGGATAAGATGTTACTGG+AGG 0.717889 1_4:-58614832 None:intergenic
GATTGTTCTCAAATACAACA+GGG 0.719905 1_4:+58615012 Msa0173380:CDS
CATTGGATTAAGCTACACGT+AGG 0.726032 1_4:-58616799 None:intergenic
GGTGGATAAGATGTTACTGG+TGG 0.740803 1_4:-58614811 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATAATTTATTTATTTT+TGG + chr1_4:58615419-58615438 Msa0173380:intron 0.0%
!!! TGAGTTAATTTTAAAAAATT+TGG + chr1_4:58615602-58615621 Msa0173380:intron 10.0%
!! AATATATTCATTAAATTATC+AGG + chr1_4:58616855-58616874 Msa0173380:three_prime_UTR 10.0%
!! ATATATTCATTAAATTATCA+GGG + chr1_4:58616856-58616875 Msa0173380:three_prime_UTR 10.0%
!! TAGATTACTTTCATTTATAA+AGG + chr1_4:58614183-58614202 Msa0173380:CDS 15.0%
!! TTAAATGTTAAAATCTTACT+TGG - chr1_4:58615165-58615184 None:intergenic 15.0%
!! ATATTATAGATATGTATATG+CGG - chr1_4:58615398-58615417 None:intergenic 15.0%
!!! TATTGATGATCATTTTTAAT+AGG + chr1_4:58615862-58615881 Msa0173380:intron 15.0%
!! TAGCAAATAACTTTAGATAA+AGG - chr1_4:58613495-58613514 None:intergenic 20.0%
!!! ATGTTTTTGATGTTTAAATG+TGG - chr1_4:58613983-58614002 None:intergenic 20.0%
!!! TCTTTTTGCTTCTAAATATT+TGG - chr1_4:58614407-58614426 None:intergenic 20.0%
!! TGAAAGAAAGAAAAAAACAA+GGG - chr1_4:58615192-58615211 None:intergenic 20.0%
!! TTGAAAGAAAGAAAAAAACA+AGG - chr1_4:58615193-58615212 None:intergenic 20.0%
!! TATTATAGATATGTATATGC+GGG - chr1_4:58615397-58615416 None:intergenic 20.0%
!!! TTGGTTTAAGTTTAAGTTTA+GGG - chr1_4:58615477-58615496 None:intergenic 20.0%
!!! TTTGGTTTAAGTTTAAGTTT+AGG - chr1_4:58615478-58615497 None:intergenic 20.0%
!!! TATTGTATTAAGCAGTTTTT+TGG - chr1_4:58615496-58615515 None:intergenic 20.0%
!!! ACAATTTTTTAGGGATATTT+TGG + chr1_4:58615537-58615556 Msa0173380:intron 20.0%
!!! TTAGGTTGTACAATATATTA+TGG + chr1_4:58616572-58616591 Msa0173380:three_prime_UTR 20.0%
!! CAATATATTATGGTCATTAT+TGG + chr1_4:58616582-58616601 Msa0173380:three_prime_UTR 20.0%
!!! TACATATATTTTGAGAACTT+AGG + chr1_4:58616610-58616629 Msa0173380:three_prime_UTR 20.0%
! ATATTATTTCACTTTCATGC+AGG + chr1_4:58613719-58613738 Msa0173380:intron 25.0%
! TTCAATGAAAGAACTCAAAA+GGG + chr1_4:58614468-58614487 Msa0173380:CDS 25.0%
!! TATCTAGAATATTTCTTCTG+TGG - chr1_4:58614543-58614562 None:intergenic 25.0%
! GTAATACCCACAAATTTAAA+TGG + chr1_4:58615322-58615341 Msa0173380:intron 25.0%
! CCATATCCATTTAAATTTGT+GGG - chr1_4:58615331-58615350 None:intergenic 25.0%
! CCACAAATTTAAATGGATAT+GGG + chr1_4:58615329-58615348 Msa0173380:intron 25.0%
! AATTTAAATGGATATGGGTA+CGG + chr1_4:58615334-58615353 Msa0173380:intron 25.0%
! ATTATAGATATGTATATGCG+GGG - chr1_4:58615396-58615415 None:intergenic 25.0%
!!! ATTTTTTACAAATGTGGGTA+TGG + chr1_4:58615776-58615795 Msa0173380:intron 25.0%
!!! TTTTTTACAAATGTGGGTAT+GGG + chr1_4:58615777-58615796 Msa0173380:intron 25.0%
!!! AATATTTTGAAGCATGAGTA+GGG - chr1_4:58615846-58615865 None:intergenic 25.0%
!!! TGATCATTTTTAATAGGTTC+TGG + chr1_4:58615868-58615887 Msa0173380:intron 25.0%
!! AGTTTTCAATTGTTTGTTCA+AGG + chr1_4:58616634-58616653 Msa0173380:three_prime_UTR 25.0%
! TTAGTCAATGTAGTGTAAAT+TGG + chr1_4:58616664-58616683 Msa0173380:three_prime_UTR 25.0%
!! TCATCATTTGACACAATTTT+TGG - chr1_4:58616732-58616751 None:intergenic 25.0%
! AAAAATTGTGTCAAATGATG+AGG + chr1_4:58616731-58616750 Msa0173380:three_prime_UTR 25.0%
! AAGGTGTCAAAAAAGAAAGA+GGG - chr1_4:58613450-58613469 None:intergenic 30.0%
!! AAAGGTGTCAAAAAAGAAAG+AGG - chr1_4:58613451-58613470 None:intergenic 30.0%
TTTAGATAAAGGAGATGAGT+GGG - chr1_4:58613484-58613503 None:intergenic 30.0%
TCAGTGTGATTGATATATAC+AGG - chr1_4:58613536-58613555 None:intergenic 30.0%
TACACAATACTCTCTGATAA+TGG + chr1_4:58613573-58613592 Msa0173380:exon 30.0%
TCTCTCTTAATTTCATGTTC+TGG + chr1_4:58613631-58613650 Msa0173380:CDS 30.0%
!! AAGTAACGAATTTTTCAACC+TGG - chr1_4:58613910-58613929 None:intergenic 30.0%
! TTAAGAGCATGCATAATCAA+AGG - chr1_4:58614049-58614068 None:intergenic 30.0%
AAGCAAGGAAGTAAAAATCT+CGG + chr1_4:58614102-58614121 Msa0173380:CDS 30.0%
! ATGATAGAAGATAGCATTGA+TGG + chr1_4:58614223-58614242 Msa0173380:CDS 30.0%
CTTCAATGAAAGAACTCAAA+AGG + chr1_4:58614467-58614486 Msa0173380:CDS 30.0%
! ATAATCCAATGCTGATTGAA+GGG - chr1_4:58614974-58614993 None:intergenic 30.0%
TGATTGTTCTCAAATACAAC+AGG + chr1_4:58615011-58615030 Msa0173380:CDS 30.0%
GATTGTTCTCAAATACAACA+GGG + chr1_4:58615012-58615031 Msa0173380:CDS 30.0%
!! CTTTTGATAGTAACTGTTGA+AGG - chr1_4:58615085-58615104 None:intergenic 30.0%
TTTCTTTCAATCTCATGCTT+AGG + chr1_4:58615203-58615222 Msa0173380:intron 30.0%
TTCTTTCAATCTCATGCTTA+GGG + chr1_4:58615204-58615223 Msa0173380:intron 30.0%
TTAAATTTGTGGGTATTACC+CGG - chr1_4:58615321-58615340 None:intergenic 30.0%
CCCACAAATTTAAATGGATA+TGG + chr1_4:58615328-58615347 Msa0173380:intron 30.0%
CCCATATCCATTTAAATTTG+TGG - chr1_4:58615332-58615351 None:intergenic 30.0%
ATTTAAATGGATATGGGTAC+GGG + chr1_4:58615335-58615354 Msa0173380:intron 30.0%
ATCCCTAAAAAATTGTACAC+CGG - chr1_4:58615533-58615552 None:intergenic 30.0%
! GTCTTTTCATAGTTAAAGTG+CGG + chr1_4:58615659-58615678 Msa0173380:intron 30.0%
! TCTTTTCATAGTTAAAGTGC+GGG + chr1_4:58615660-58615679 Msa0173380:intron 30.0%
! TTTTTACAAATGTGGGTATG+GGG + chr1_4:58615778-58615797 Msa0173380:intron 30.0%
!!! CAATATTTTGAAGCATGAGT+AGG - chr1_4:58615847-58615866 None:intergenic 30.0%
CATGATTAGTACATGCTTAT+TGG - chr1_4:58616164-58616183 None:intergenic 30.0%
CAATAAGCATGTACTAATCA+TGG + chr1_4:58616162-58616181 Msa0173380:intron 30.0%
ATGTTGTGTTTACAATAGGA+GGG - chr1_4:58616292-58616311 None:intergenic 30.0%
TCCTATTGTAAACACAACAT+CGG + chr1_4:58616292-58616311 Msa0173380:CDS 30.0%
AAAATATTCTAAGCAGCTCA+TGG - chr1_4:58616554-58616573 None:intergenic 30.0%
! TGAGCTGCTTAGAATATTTT+AGG + chr1_4:58616554-58616573 Msa0173380:three_prime_UTR 30.0%
GTCAGAGTTGTTATAATTTG+CGG + chr1_4:58616686-58616705 Msa0173380:three_prime_UTR 30.0%
! GATTAAAAAGTCAAGGTGTT+TGG - chr1_4:58616914-58616933 Msa0173390:three_prime_UTR 30.0%
CTTTAGATAAAGGAGATGAG+TGG - chr1_4:58613485-58613504 None:intergenic 35.0%
TCTCTACTTAAACAAAAGCC+AGG + chr1_4:58613889-58613908 Msa0173380:CDS 35.0%
!! CACTAGTTGAGCTTTTAACT+CGG - chr1_4:58613951-58613970 None:intergenic 35.0%
AAAAACATCATTGCTAGCTG+TGG + chr1_4:58613995-58614014 Msa0173380:CDS 35.0%
CGAGTTACTTCTATTGAACT+TGG - chr1_4:58614367-58614386 None:intergenic 35.0%
AAGATCTCTCTTCTAGACAA+AGG - chr1_4:58614511-58614530 None:intergenic 35.0%
! TAACTGGTGTTGGATTTGTA+GGG - chr1_4:58614594-58614613 None:intergenic 35.0%
! ATAACTGGTGTTGGATTTGT+AGG - chr1_4:58614595-58614614 None:intergenic 35.0%
! ATAATGGTTGGAGTATCTGA+GGG - chr1_4:58614622-58614641 None:intergenic 35.0%
! TATAATGGTTGGAGTATCTG+AGG - chr1_4:58614623-58614642 None:intergenic 35.0%
! CATAATCCAATGCTGATTGA+AGG - chr1_4:58614975-58614994 None:intergenic 35.0%
TTGGATTATGCTTGTGGAAA+TGG + chr1_4:58614985-58615004 Msa0173380:CDS 35.0%
AAAAAATACCCACAATGGGT+AGG + chr1_4:58615261-58615280 Msa0173380:intron 35.0%
AAAAATACCCACAATGGGTA+GGG + chr1_4:58615262-58615281 Msa0173380:intron 35.0%
!!! ATGCCGGTGTACAATTTTTT+AGG + chr1_4:58615527-58615546 Msa0173380:intron 35.0%
!!! TGCCGGTGTACAATTTTTTA+GGG + chr1_4:58615528-58615547 Msa0173380:intron 35.0%
ATAGTTAAAGTGCGGGTAAT+GGG + chr1_4:58615667-58615686 Msa0173380:intron 35.0%
!!! ACGGGCATTTTTTACAAATG+TGG + chr1_4:58615770-58615789 Msa0173380:intron 35.0%
!!! CGGGCATTTTTTACAAATGT+GGG + chr1_4:58615771-58615790 Msa0173380:intron 35.0%
TGATATCATTGGTGAAGTTG+AGG - chr1_4:58615935-58615954 None:intergenic 35.0%
! GAAGTTGAAGTTGATTGTGT+AGG - chr1_4:58615970-58615989 None:intergenic 35.0%
! AATGCTGTCTTTTGTAGCTA+TGG + chr1_4:58616197-58616216 Msa0173380:intron 35.0%
TTGAGTTTAACACTGAAGGT+GGG - chr1_4:58616226-58616245 None:intergenic 35.0%
TTGCTTGAGTTTAACACTGA+AGG - chr1_4:58616230-58616249 None:intergenic 35.0%
GATGTTGTGTTTACAATAGG+AGG - chr1_4:58616293-58616312 None:intergenic 35.0%
AAGACTATACAGCCAGTAAA+AGG - chr1_4:58616341-58616360 None:intergenic 35.0%
!! AACCTGTTTCTGAACTCTAT+AGG - chr1_4:58616400-58616419 None:intergenic 35.0%
! TCAGAAACAGGTTTTCCATT+CGG + chr1_4:58616407-58616426 Msa0173380:three_prime_UTR 35.0%
! TACACGTAGGTGTATTCTTT+TGG - chr1_4:58616789-58616808 None:intergenic 35.0%
TGTAGCTTAATCCAATGCAT+TGG + chr1_4:58616805-58616824 Msa0173380:three_prime_UTR 35.0%
GTGCGTAGATTAAAAAGTCA+AGG - chr1_4:58616921-58616940 Msa0173390:three_prime_UTR 35.0%
!! ATACTCTCTGATAATGGCCA+AGG + chr1_4:58613579-58613598 Msa0173380:exon 40.0%
AGAGAGAAGAGAGAAACAAG+AGG - chr1_4:58613618-58613637 None:intergenic 40.0%
TCACTTTCATGCAGGTTCTT+TGG + chr1_4:58613727-58613746 Msa0173380:intron 40.0%
TTTCATGCAGGTTCTTTGGT+GGG + chr1_4:58613731-58613750 Msa0173380:intron 40.0%
! GGTTTTTCCTATCATGAGAG+AGG + chr1_4:58613752-58613771 Msa0173380:CDS 40.0%
ATGAAGAAACTTTGCTCTGC+TGG - chr1_4:58613799-58613818 None:intergenic 40.0%
TTAACTCGGAAACTGCTGAA+GGG - chr1_4:58613937-58613956 None:intergenic 40.0%
TTTAACTCGGAAACTGCTGA+AGG - chr1_4:58613938-58613957 None:intergenic 40.0%
CAGTGATCTTCACATAAGCA+AGG + chr1_4:58614087-58614106 Msa0173380:CDS 40.0%
CATTTCCACTTCAAGTCTTG+AGG + chr1_4:58614128-58614147 Msa0173380:CDS 40.0%
AACTTCCTCAAGACTTGAAG+TGG - chr1_4:58614136-58614155 None:intergenic 40.0%
CTCTTGATTGTAAGAACCAC+AGG - chr1_4:58614334-58614353 None:intergenic 40.0%
GAAAGAACTCAAAAGGGAAG+AGG + chr1_4:58614474-58614493 Msa0173380:CDS 40.0%
GTAGGGTAAACTGTGTTTGT+TGG - chr1_4:58614577-58614596 None:intergenic 40.0%
! GTATCTGAGGGTGTAATAAC+TGG - chr1_4:58614610-58614629 None:intergenic 40.0%
GAAGGAACTGCTATAATGGT+TGG - chr1_4:58614634-58614653 None:intergenic 40.0%
TGTGGAAGGAACTGCTATAA+TGG - chr1_4:58614638-58614657 None:intergenic 40.0%
ATTGTGACAGGATTTGTGGA+AGG - chr1_4:58614652-58614671 None:intergenic 40.0%
GGAAATTGTGACAGGATTTG+TGG - chr1_4:58614656-58614675 None:intergenic 40.0%
TTTGTAGGGGAAATTGTGAC+AGG - chr1_4:58614664-58614683 None:intergenic 40.0%
GTAGTTGAAGGAACTGTTAC+TGG - chr1_4:58614700-58614719 None:intergenic 40.0%
AACAACTCCAACCATTACAC+CGG + chr1_4:58614741-58614760 Msa0173380:CDS 40.0%
ACATCTTATCCACCTCCATT+AGG + chr1_4:58614841-58614860 Msa0173380:CDS 40.0%
ACTGGAACATTTCCTAATGG+AGG - chr1_4:58614856-58614875 None:intergenic 40.0%
TCCATTAGGAAATGTTCCAG+TGG + chr1_4:58614855-58614874 Msa0173380:CDS 40.0%
ACCACTGGAACATTTCCTAA+TGG - chr1_4:58614859-58614878 None:intergenic 40.0%
!! GAAGGAGCATTTGTGTTTGA+AGG - chr1_4:58614901-58614920 None:intergenic 40.0%
! TCAGCATTGGATTATGCTTG+TGG + chr1_4:58614979-58614998 Msa0173380:CDS 40.0%
TGTTGAAGGCAAAAGAAGCA+TGG - chr1_4:58615071-58615090 None:intergenic 40.0%
TTCAATCTCATGCTTAGGGA+TGG + chr1_4:58615208-58615227 Msa0173380:intron 40.0%
!!! ATTTTTTGCGGGTACCCATA+GGG - chr1_4:58615248-58615267 None:intergenic 40.0%
!!! TATTTTTTGCGGGTACCCAT+AGG - chr1_4:58615249-58615268 None:intergenic 40.0%
!!! CCATTGTGGGTATTTTTTGC+GGG - chr1_4:58615259-58615278 None:intergenic 40.0%
!!! CCCATTGTGGGTATTTTTTG+CGG - chr1_4:58615260-58615279 None:intergenic 40.0%
CCGCAAAAAATACCCACAAT+GGG + chr1_4:58615257-58615276 Msa0173380:intron 40.0%
CAATAACAACTCCATCATGC+CGG + chr1_4:58615511-58615530 Msa0173380:intron 40.0%
AAAATTGTACACCGGCATGA+TGG - chr1_4:58615525-58615544 None:intergenic 40.0%
CATAGTTAAAGTGCGGGTAA+TGG + chr1_4:58615666-58615685 Msa0173380:intron 40.0%
!!! TTTTGAAGCATGAGTAGGGA+TGG - chr1_4:58615842-58615861 None:intergenic 40.0%
! GGTGTTGGAGATGATATCAT+TGG - chr1_4:58615946-58615965 None:intergenic 40.0%
! GTTGAAGTTGATTGTGTAGG+TGG - chr1_4:58615967-58615986 None:intergenic 40.0%
! ATTGTTGGAATAGATGGTGG+AGG - chr1_4:58616018-58616037 None:intergenic 40.0%
GCTATTGTTGGAATAGATGG+TGG - chr1_4:58616021-58616040 None:intergenic 40.0%
GGAGCTATTGTTGGAATAGA+TGG - chr1_4:58616024-58616043 None:intergenic 40.0%
! ATTGTTGGTGGAGCTATTGT+TGG - chr1_4:58616033-58616052 None:intergenic 40.0%
! CAACATCTTCAGGCACTTTT+GGG + chr1_4:58616088-58616107 Msa0173380:CDS 40.0%
TGAGTTTAACACTGAAGGTG+GGG - chr1_4:58616225-58616244 None:intergenic 40.0%
CTTGAGTTTAACACTGAAGG+TGG - chr1_4:58616227-58616246 None:intergenic 40.0%
! TCAGGTACAATGCCAGATTT+TGG + chr1_4:58616257-58616276 Msa0173380:CDS 40.0%
! CAGGTACAATGCCAGATTTT+GGG + chr1_4:58616258-58616277 Msa0173380:CDS 40.0%
GCCGATGTTGTGTTTACAAT+AGG - chr1_4:58616296-58616315 None:intergenic 40.0%
TAAAAGGTTTCAGAGCTCGA+GGG - chr1_4:58616325-58616344 None:intergenic 40.0%
CACCTATAGAGTTCAGAAAC+AGG + chr1_4:58616395-58616414 Msa0173380:exon 40.0%
CATTACATGCTGCAGTGTTA+AGG + chr1_4:58616474-58616493 Msa0173380:three_prime_UTR 40.0%
!! ATATAGAAGCACCTGTCACA+GGG - chr1_4:58616766-58616785 None:intergenic 40.0%
CATTGGATTAAGCTACACGT+AGG - chr1_4:58616802-58616821 None:intergenic 40.0%
AGAATCAGCATCCAATGCAT+TGG - chr1_4:58616819-58616838 None:intergenic 40.0%
!! GAAAAACCAGAAAGCACTGA+TGG + chr1_4:58616878-58616897 Msa0173380:three_prime_UTR 40.0%
GCACATGTGAAATGCTTTCA+AGG + chr1_4:58616937-58616956 Msa0173380:three_prime_UTR 40.0%
GATAAAGGAGATGAGTGGGA+GGG - chr1_4:58613480-58613499 None:intergenic 45.0%
AGATAAAGGAGATGAGTGGG+AGG - chr1_4:58613481-58613500 None:intergenic 45.0%
CTTTCATGCAGGTTCTTTGG+TGG + chr1_4:58613730-58613749 Msa0173380:intron 45.0%
AGTGTCTCCTCTCTCATGAT+AGG - chr1_4:58613762-58613781 None:intergenic 45.0%
ATCATGAGAGAGGAGACACT+TGG + chr1_4:58613762-58613781 Msa0173380:CDS 45.0%
GAGCTTTCGTCACAGATCAT+AGG + chr1_4:58613828-58613847 Msa0173380:CDS 45.0%
TCCTTGCAAAGATGTTCCTG+TGG + chr1_4:58614315-58614334 Msa0173380:CDS 45.0%
ACCACAGGAACATCTTTGCA+AGG - chr1_4:58614319-58614338 None:intergenic 45.0%
GAACTCAAAAGGGAAGAGGA+AGG + chr1_4:58614478-58614497 Msa0173380:CDS 45.0%
! GAGGGTGTAATAACTGGTGT+TGG - chr1_4:58614604-58614623 None:intergenic 45.0%
CATTGCAGCTGGATTTGTAG+GGG - chr1_4:58614677-58614696 None:intergenic 45.0%
GCATTGCAGCTGGATTTGTA+GGG - chr1_4:58614678-58614697 None:intergenic 45.0%
GTTGGAGTTGTTGGAGGTAA+AGG - chr1_4:58614733-58614752 None:intergenic 45.0%
GTAATGGTTGGAGTTGTTGG+AGG - chr1_4:58614739-58614758 None:intergenic 45.0%
GGTGTAATGGTTGGAGTTGT+TGG - chr1_4:58614742-58614761 None:intergenic 45.0%
GTTGTAGCTGGATTGAAGAC+TGG - chr1_4:58614769-58614788 None:intergenic 45.0%
ACTGTTGTAGGAGTTGTAGC+TGG - chr1_4:58614781-58614800 None:intergenic 45.0%
ACAACTCCTACAACAGTTCC+AGG + chr1_4:58614784-58614803 Msa0173380:CDS 45.0%
GGTGGATAAGATGTTACTGG+TGG - chr1_4:58614814-58614833 None:intergenic 45.0%
GGAGGTGGATAAGATGTTAC+TGG - chr1_4:58614817-58614836 None:intergenic 45.0%
GGATAAGATGTTACTGGAGG+TGG - chr1_4:58614832-58614851 None:intergenic 45.0%
GGTGGATAAGATGTTACTGG+AGG - chr1_4:58614814-58614833 None:intergenic 45.0%
GGAGGTGGATAAGATGTTAC+TGG - chr1_4:58614817-58614836 None:intergenic 45.0%
GGAACATTTCCTAATGGAGG+TGG - chr1_4:58614853-58614872 None:intergenic 45.0%
GCATTTGTGTTTGAAGGAGG+TGG - chr1_4:58614895-58614914 None:intergenic 45.0%
! GGAGCATTTGTGTTTGAAGG+AGG - chr1_4:58614898-58614917 None:intergenic 45.0%
ACAAATGCTCCTTCTGCTCA+GGG + chr1_4:58614907-58614926 Msa0173380:CDS 45.0%
AGCTTCCCTTCAATCAGCAT+TGG + chr1_4:58614966-58614985 Msa0173380:CDS 45.0%
! GCATGGTTCTGCAAAGTAAC+AGG - chr1_4:58615054-58615073 None:intergenic 45.0%
TCATGCTTAGGGATGGCAAT+TGG + chr1_4:58615215-58615234 Msa0173380:intron 45.0%
CCCGCAAAAAATACCCACAA+TGG + chr1_4:58615256-58615275 Msa0173380:intron 45.0%
! GGTTTTACCCTACCCATTGT+GGG - chr1_4:58615272-58615291 None:intergenic 45.0%
AGGGTAAAACCCCGCATTTA+TGG + chr1_4:58615281-58615300 Msa0173380:intron 45.0%
GGGTAAAACCCCGCATTTAT+GGG + chr1_4:58615282-58615301 Msa0173380:intron 45.0%
AAACCCCGCATTTATGGGTT+TGG + chr1_4:58615287-58615306 Msa0173380:intron 45.0%
AACCCCGCATTTATGGGTTT+GGG + chr1_4:58615288-58615307 Msa0173380:intron 45.0%
AATGGATATGGGTACGGGTA+CGG + chr1_4:58615340-58615359 Msa0173380:intron 45.0%
ATATGTATATGCGGGGTTGC+GGG - chr1_4:58615389-58615408 None:intergenic 45.0%
GATATGTATATGCGGGGTTG+CGG - chr1_4:58615390-58615409 None:intergenic 45.0%
ACTTAGGTACCCATAGGGTA+TGG + chr1_4:58615703-58615722 Msa0173380:intron 45.0%
CTTAGGTACCCATAGGGTAT+GGG + chr1_4:58615704-58615723 Msa0173380:intron 45.0%
TTAGGTACCCATAGGGTATG+GGG + chr1_4:58615705-58615724 Msa0173380:intron 45.0%
ACTAAAGTTGTTGCCCACGA+GGG + chr1_4:58615734-58615753 Msa0173380:intron 45.0%
TACAAATGTGGGTATGGGGA+AGG + chr1_4:58615782-58615801 Msa0173380:intron 45.0%
ACAAATGTGGGTATGGGGAA+GGG + chr1_4:58615783-58615802 Msa0173380:intron 45.0%
ACTGTAGTACCCTACCCATA+GGG + chr1_4:58615807-58615826 Msa0173380:intron 45.0%
GACGACGATGAAGATGATGA+CGG - chr1_4:58615907-58615926 None:intergenic 45.0%
GTTGATTGTGTAGGTGGTGT+TGG - chr1_4:58615961-58615980 None:intergenic 45.0%
!! GGTGTTGTTAGATTTGGTGG+TGG - chr1_4:58615997-58616016 None:intergenic 45.0%
!! GGAGGTGTTGTTAGATTTGG+TGG - chr1_4:58616000-58616019 None:intergenic 45.0%
!! GGTGGAGGTGTTGTTAGATT+TGG - chr1_4:58616003-58616022 None:intergenic 45.0%
! AAAGTGCCTGAAGATGTTGG+TGG - chr1_4:58616087-58616106 None:intergenic 45.0%
!! CCAAAAGTGCCTGAAGATGT+TGG - chr1_4:58616090-58616109 None:intergenic 45.0%
! CCAACATCTTCAGGCACTTT+TGG + chr1_4:58616087-58616106 Msa0173380:CDS 45.0%
GTAAAAGGTTTCAGAGCTCG+AGG - chr1_4:58616326-58616345 None:intergenic 45.0%
!!! CGAGCTCTGAAACCTTTTAC+TGG + chr1_4:58616326-58616345 Msa0173380:CDS 45.0%
AACTCTATAGGTGCATGCTG+AGG - chr1_4:58616388-58616407 None:intergenic 45.0%
GAGTAGTGTGATGATCCGAA+TGG - chr1_4:58616425-58616444 None:intergenic 45.0%
GCTGCAGTGTTAAGGACTAT+AGG + chr1_4:58616482-58616501 Msa0173380:three_prime_UTR 45.0%
GGACTATAGGTGCAGAAAGA+AGG + chr1_4:58616495-58616514 Msa0173380:three_prime_UTR 45.0%
!! GATATAGAAGCACCTGTCAC+AGG - chr1_4:58616767-58616786 None:intergenic 45.0%
TGAGTGGGAGGGAGAGAAAA+AGG - chr1_4:58613469-58613488 None:intergenic 50.0%
GAGGCAGAAAGAAGCTTCCT+TGG - chr1_4:58613599-58613618 None:intergenic 50.0%
CAGAAGCAGCAAGATTAGCG+CGG - chr1_4:58614291-58614310 None:intergenic 50.0%
GGCATTGCAGCTGGATTTGT+AGG - chr1_4:58614679-58614698 None:intergenic 50.0%
ACTGTTACTGGCATTGCAGC+TGG - chr1_4:58614688-58614707 None:intergenic 50.0%
GGAACAGCAGGTGTAGTTGA+AGG - chr1_4:58614712-58614731 None:intergenic 50.0%
GTTGGAGGTAAAGGAACAGC+AGG - chr1_4:58614724-58614743 None:intergenic 50.0%
TTGAAGGAGGTGGCTGTTGA+GGG - chr1_4:58614885-58614904 None:intergenic 50.0%
TTTGAAGGAGGTGGCTGTTG+AGG - chr1_4:58614886-58614905 None:intergenic 50.0%
CACAAATGCTCCTTCTGCTC+AGG + chr1_4:58614906-58614925 Msa0173380:CDS 50.0%
! AGTTGGTGTGTGGCGAAAAC+AGG + chr1_4:58614934-58614953 Msa0173380:CDS 50.0%
GCTGATTGAAGGGAAGCTTG+TGG - chr1_4:58614964-58614983 None:intergenic 50.0%
!! AAGTCGCAACTTGTTGGAGC+TGG - chr1_4:58615111-58615130 None:intergenic 50.0%
GCTCCAACAAGTTGCGACTT+TGG + chr1_4:58615111-58615130 Msa0173380:CDS 50.0%
CCTCCAAAGTCGCAACTTGT+TGG - chr1_4:58615117-58615136 None:intergenic 50.0%
CCAACAAGTTGCGACTTTGG+AGG + chr1_4:58615114-58615133 Msa0173380:CDS 50.0%
! GGGTTTTACCCTACCCATTG+TGG - chr1_4:58615273-58615292 None:intergenic 50.0%
TGCCCAAACCCATAAATGCG+GGG - chr1_4:58615293-58615312 None:intergenic 50.0%
GTGCCCAAACCCATAAATGC+GGG - chr1_4:58615294-58615313 None:intergenic 50.0%
CGTGCCCAAACCCATAAATG+CGG - chr1_4:58615295-58615314 None:intergenic 50.0%
CGCATTTATGGGTTTGGGCA+CGG + chr1_4:58615293-58615312 Msa0173380:intron 50.0%
GCATTTATGGGTTTGGGCAC+GGG + chr1_4:58615294-58615313 Msa0173380:intron 50.0%
ATGGATATGGGTACGGGTAC+GGG + chr1_4:58615341-58615360 Msa0173380:intron 50.0%
!! TAAAGTGCGGGTAATGGGTG+CGG + chr1_4:58615672-58615691 Msa0173380:intron 50.0%
ATGGGCACTTAGGTACCCAT+AGG + chr1_4:58615697-58615716 Msa0173380:intron 50.0%
TGGGCACTTAGGTACCCATA+GGG + chr1_4:58615698-58615717 Msa0173380:intron 50.0%
TACCCATAGGGTATGGGGAA+GGG + chr1_4:58615710-58615729 Msa0173380:intron 50.0%
GACTAAAGTTGTTGCCCACG+AGG + chr1_4:58615733-58615752 Msa0173380:intron 50.0%
CACTGTAGTACCCTACCCAT+AGG + chr1_4:58615806-58615825 Msa0173380:intron 50.0%
CAATGGGTACCCTATGGGTA+GGG - chr1_4:58615819-58615838 None:intergenic 50.0%
GATGGCAATGGGTACCCTAT+GGG - chr1_4:58615824-58615843 None:intergenic 50.0%
GCATGAGTAGGGATGGCAAT+GGG - chr1_4:58615835-58615854 None:intergenic 50.0%
AGCATGAGTAGGGATGGCAA+TGG - chr1_4:58615836-58615855 None:intergenic 50.0%
GGAGCTGTTGACATTGTTGG+TGG - chr1_4:58616045-58616064 None:intergenic 50.0%
GGTGGAGCTGTTGACATTGT+TGG - chr1_4:58616048-58616067 None:intergenic 50.0%
GGAGCTGTTGGAATTGATGG+TGG - chr1_4:58616066-58616085 None:intergenic 50.0%
GGTGGAGCTGTTGGAATTGA+TGG - chr1_4:58616069-58616088 None:intergenic 50.0%
! GAAGATGTTGGTGGAGCTGT+TGG - chr1_4:58616078-58616097 None:intergenic 50.0%
ACAGCTCCACCAACATCTTC+AGG + chr1_4:58616078-58616097 Msa0173380:CDS 50.0%
!! GGCACTTTTGGGTAAGTGAG+AGG + chr1_4:58616099-58616118 Msa0173380:intron 50.0%
AACTCAAGCAACCCAGCTTC+AGG + chr1_4:58616239-58616258 Msa0173380:CDS 50.0%
CTGGCATTGTACCTGAAGCT+GGG - chr1_4:58616253-58616272 None:intergenic 50.0%
TCTGGCATTGTACCTGAAGC+TGG - chr1_4:58616254-58616273 None:intergenic 50.0%
GGGCTATCAGACCCAAAATC+TGG - chr1_4:58616272-58616291 None:intergenic 50.0%
CTGAGGCTTGCAGTGACAAA+TGG - chr1_4:58616371-58616390 None:intergenic 50.0%
GGTACTCTATACCCTGTGAC+AGG + chr1_4:58616752-58616771 Msa0173380:three_prime_UTR 50.0%
TGATCGCCATCAGTGCTTTC+TGG - chr1_4:58616887-58616906 Msa0173390:three_prime_UTR 50.0%
!! ACTGGTGCCGGTGTAATGGT+TGG - chr1_4:58614751-58614770 None:intergenic 55.0%
!! GAAGACTGGTGCCGGTGTAA+TGG - chr1_4:58614755-58614774 None:intergenic 55.0%
GCTGGATTGAAGACTGGTGC+CGG - chr1_4:58614763-58614782 None:intergenic 55.0%
GGTGCACCTGGAACTGTTGT+AGG - chr1_4:58614793-58614812 None:intergenic 55.0%
! GATGTTACTGGTGGTGCACC+TGG - chr1_4:58614805-58614824 None:intergenic 55.0%
GGCTGTTGAGGGTTTACCAC+TGG - chr1_4:58614874-58614893 None:intergenic 55.0%
CAACTCTGTCCCTGAGCAGA+AGG - chr1_4:58614919-58614938 None:intergenic 55.0%
CTTCTGCTCAGGGACAGAGT+TGG + chr1_4:58614917-58614936 Msa0173380:CDS 55.0%
!! TCAGGGACAGAGTTGGTGTG+TGG + chr1_4:58614924-58614943 Msa0173380:CDS 55.0%
TAGGGATGGCAATTGGACCC+AGG + chr1_4:58615222-58615241 Msa0173380:intron 55.0%
CAATTGGACCCAGGCCCTAT+GGG + chr1_4:58615231-58615250 Msa0173380:intron 55.0%
TATGGGTACGGGTACGGGTA+AGG + chr1_4:58615346-58615365 Msa0173380:intron 55.0%
ATGGGTACGGGTACGGGTAA+GGG + chr1_4:58615347-58615366 Msa0173380:intron 55.0%
!! CGGGTAATGGGTGCGGATAT+GGG + chr1_4:58615679-58615698 Msa0173380:intron 55.0%
GTACCCATAGGGTATGGGGA+AGG + chr1_4:58615709-58615728 Msa0173380:intron 55.0%
ACCCATAGGGTATGGGGAAG+GGG + chr1_4:58615711-58615730 Msa0173380:intron 55.0%
TCCCCTTCCCCATACCCTAT+GGG - chr1_4:58615715-58615734 None:intergenic 55.0%
AGTTGTTGCCCACGAGGGTA+CGG + chr1_4:58615739-58615758 Msa0173380:intron 55.0%
GCAATGGGTACCCTATGGGT+AGG - chr1_4:58615820-58615839 None:intergenic 55.0%
GGATGGCAATGGGTACCCTA+TGG - chr1_4:58615825-58615844 None:intergenic 55.0%
GCAATTGGACCCAGGCCCTA+TGG + chr1_4:58615230-58615249 Msa0173380:intron 60.0%
TATGGGTTTGGGCACGGGTC+CGG + chr1_4:58615299-58615318 Msa0173380:intron 60.0%
ATATGCGGGGTTGCGGGTCT+GGG - chr1_4:58615383-58615402 None:intergenic 60.0%
TATATGCGGGGTTGCGGGTC+TGG - chr1_4:58615384-58615403 None:intergenic 60.0%
!! GCGGGTAATGGGTGCGGATA+TGG + chr1_4:58615678-58615697 Msa0173380:intron 60.0%
GGGTGCGGATATGGGCACTT+AGG + chr1_4:58615687-58615706 Msa0173380:intron 60.0%
GTCCCCTTCCCCATACCCTA+TGG - chr1_4:58615716-58615735 None:intergenic 60.0%
! GTTGTTGCCCACGAGGGTAC+GGG + chr1_4:58615740-58615759 Msa0173380:intron 60.0%
! TTTCAGAGCTCGAGGGTGCG+AGG - chr1_4:58616318-58616337 None:intergenic 60.0%
TGCGGGTACCCATAGGGCCT+GGG - chr1_4:58615242-58615261 None:intergenic 65.0%
TTGCGGGTACCCATAGGGCC+TGG - chr1_4:58615243-58615262 None:intergenic 65.0%
ATGGGTTTGGGCACGGGTCC+GGG + chr1_4:58615300-58615319 Msa0173380:intron 65.0%
! TGCCCACGAGGGTACGGGCA+CGG + chr1_4:58615745-58615764 Msa0173380:intron 70.0%
ACCCGTGCCCGTACCCTCGT+GGG - chr1_4:58615750-58615769 None:intergenic 70.0%
TACCCGTGCCCGTACCCTCG+TGG - chr1_4:58615751-58615770 None:intergenic 70.0%
! CGAGGGTACGGGCACGGGTA+CGG + chr1_4:58615751-58615770 Msa0173380:intron 70.0%
! GAGGGTACGGGCACGGGTAC+GGG + chr1_4:58615752-58615771 Msa0173380:intron 70.0%
! GCCCACGAGGGTACGGGCAC+GGG + chr1_4:58615746-58615765 Msa0173380:intron 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 58613442 58616976 58613442 ID=Msa0173380;Name=Msa0173380
chr1_4 mRNA 58613442 58616976 58613442 ID=Msa0173380-mRNA-1;Parent=Msa0173380;Name=Msa0173380-mRNA-1;_AED=0.05;_eAED=0.05;_QI=150|0.66|0.75|1|0.33|0.25|4|573|581
chr1_4 exon 58613442 58613652 58613442 ID=Msa0173380-mRNA-1:exon:18204;Parent=Msa0173380-mRNA-1
chr1_4 exon 58613741 58615165 58613741 ID=Msa0173380-mRNA-1:exon:18205;Parent=Msa0173380-mRNA-1
chr1_4 exon 58616040 58616109 58616040 ID=Msa0173380-mRNA-1:exon:18206;Parent=Msa0173380-mRNA-1
chr1_4 exon 58616214 58616976 58616214 ID=Msa0173380-mRNA-1:exon:18207;Parent=Msa0173380-mRNA-1
chr1_4 five_prime_UTR 58613442 58613591 58613442 ID=Msa0173380-mRNA-1:five_prime_utr;Parent=Msa0173380-mRNA-1
chr1_4 CDS 58613592 58613652 58613592 ID=Msa0173380-mRNA-1:cds;Parent=Msa0173380-mRNA-1
chr1_4 CDS 58613741 58615165 58613741 ID=Msa0173380-mRNA-1:cds;Parent=Msa0173380-mRNA-1
chr1_4 CDS 58616040 58616109 58616040 ID=Msa0173380-mRNA-1:cds;Parent=Msa0173380-mRNA-1
chr1_4 CDS 58616214 58616403 58616214 ID=Msa0173380-mRNA-1:cds;Parent=Msa0173380-mRNA-1
chr1_4 three_prime_UTR 58616404 58616976 58616404 ID=Msa0173380-mRNA-1:three_prime_utr;Parent=Msa0173380-mRNA-1
Gene Sequence

>Msa0173380

ATGGCCAAGGAAGCTTCTTTCTGCCTCTTGTTTCTCTCTTCTCTCTTAATTTCATGTTCTGGTTCTTTGGTGGGTTTTTCCTATCATGAGAGAGGAGACACTTGGACATCATTACTCCAGCAGAGCAAAGTTTCTTCATCTCAGATTCGAGCTTTCGTCACAGATCATAGGATTTTGAGCACTCTTACAAACTCAAATGTGTTAGTTGATCTCTACTTAAACAAAAGCCAGGTTGAAAAATTCGTTACTTCAAACCCTTCAGCAGTTTCCGAGTTAAAAGCTCAACTAGTGAGCTTTCTTCCACATTTAAACATCAAAAACATCATTGCTAGCTGTGGAAGTGAGTGCTTAGTACAAAATGAGATACCTTTGATTATGCATGCTCTTAAATCAATTCATTCAATTCTCAGTGATCTTCACATAAGCAAGGAAGTAAAAATCTCGGTCGCATTTCCACTTCAAGTCTTGAGGAAGTTGAATGCATCACAAGAACACGAAATTTGTAGATTACTTTCATTTATAAAGGAAACGAAATCGTTTGTAATGATAGAAGATAGCATTGATGGAGAATTAAGTGTGAATGATCATTTTGTTCAAACAATTATCAACCGCGCTAATCTTGCTGCTTCTGTTCTTCCTTGCAAAGATGTTCCTGTGGTTCTTACAATCAAGAGTTCAGTTATACCAAGTTCAATAGAAGTAACTCGATTTAGTAAAAGAGTATCCAAATATTTAGAAGCAAAAAGAATAGCTGCATTATATGTAGAACTGCATACAGCAGAAGATTCTTCAATGAAAGAACTCAAAAGGGAAGAGGAAGGTATGTTTCCTTTGTCTAGAAGAGAGATCTTAAGCAAATTCCACAGAAGAAATATTCTAGATAACACAAACAGTCCAACAAACACAGTTTACCCTACAAATCCAACACCAGTTATTACACCCTCAGATACTCCAACCATTATAGCAGTTCCTTCCACAAATCCTGTCACAATTTCCCCTACAAATCCAGCTGCAATGCCAGTAACAGTTCCTTCAACTACACCTGCTGTTCCTTTACCTCCAACAACTCCAACCATTACACCGGCACCAGTCTTCAATCCAGCTACAACTCCTACAACAGTTCCAGGTGCACCACCAGTAACATCTTATCCACCTCCAGTAACATCTTATCCACCTCCATTAGGAAATGTTCCAGTGGTAAACCCTCAACAGCCACCTCCTTCAAACACAAATGCTCCTTCTGCTCAGGGACAGAGTTGGTGTGTGGCGAAAACAGGTGCTCCACAAGCTTCCCTTCAATCAGCATTGGATTATGCTTGTGGAAATGGTGCTGATTGTTCTCAAATACAACAGGGTGCAAGTTGTTACAGTCCTGTTACTTTGCAGAACCATGCTTCTTTTGCCTTCAACAGTTACTATCAAAAGAAGCCAGCTCCAACAAGTTGCGACTTTGGAGGCGCTGCTATGTTAGTTAGCTCAAATCCAACTCCACCAACAATGTCAACAGCTCCACCATCAATTCCAACAGCTCCACCAACATCTTCAGGCACTTTTGGCTATGGTACCCCACCTTCAGTGTTAAACTCAAGCAACCCAGCTTCAGGTACAATGCCAGATTTTGGGTCTGATAGCCCTCCTATTGTAAACACAACATCGGCCTCGCACCCTCGAGCTCTGAAACCTTTTACTGGCTGTATAGTCTTGATGATTCCATTTGTCACTGCAAGCCTCAGCATGCACCTATAG
Protein sequence

>Msa0173380

MAKEASFCLLFLSSLLISCSGSLVGFSYHERGDTWTSLLQQSKVSSSQIRAFVTDHRILSTLTNSNVLVDLYLNKSQVEKFVTSNPSAVSELKAQLVSFLPHLNIKNIIASCGSECLVQNEIPLIMHALKSIHSILSDLHISKEVKISVAFPLQVLRKLNASQEHEICRLLSFIKETKSFVMIEDSIDGELSVNDHFVQTIINRANLAASVLPCKDVPVVLTIKSSVIPSSIEVTRFSKRVSKYLEAKRIAALYVELHTAEDSSMKELKREEEGMFPLSRREILSKFHRRNILDNTNSPTNTVYPTNPTPVITPSDTPTIIAVPSTNPVTISPTNPAAMPVTVPSTTPAVPLPPTTPTITPAPVFNPATTPTTVPGAPPVTSYPPPVTSYPPPLGNVPVVNPQQPPPSNTNAPSAQGQSWCVAKTGAPQASLQSALDYACGNGADCSQIQQGASCYSPVTLQNHASFAFNSYYQKKPAPTSCDFGGAAMLVSSNPTPPTMSTAPPSIPTAPPTSSGTFGYGTPPSVLNSSNPASGTMPDFGSDSPPIVNTTSASHPRALKPFTGCIVLMIPFVTASLSMHL*