Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1153410 | AFK46804.1 | 55.372 | 121 | 40 | 4 | 47 | 167 | 38 | 144 | 5.57e-26 | 111 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1153410 | sp|Q9SRV7|SY131_ARATH | 51.724 | 58 | 28 | 0 | 109 | 166 | 82 | 139 | 6.65e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1153410 | I3T2R2 | 55.372 | 121 | 40 | 4 | 47 | 167 | 38 | 144 | 2.66e-26 | 111 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002230 | Msa1153410 | 0.817620 | 3.000873e-52 | -8.615850e-47 |
| Msa0075880 | Msa1153410 | 0.812029 | 5.205746e-51 | -8.615850e-47 |
| Msa0657730 | Msa1153410 | 0.845866 | 3.108294e-59 | -8.615850e-47 |
| Msa0688480 | Msa1153410 | 0.802027 | 6.815402e-49 | -8.615850e-47 |
| Msa0701010 | Msa1153410 | 0.808337 | 3.254536e-50 | -8.615850e-47 |
| Msa0702780 | Msa1153410 | 0.808913 | 2.451766e-50 | -8.615850e-47 |
| Msa0828940 | Msa1153410 | 0.831049 | 2.080029e-55 | -8.615850e-47 |
| Msa0197660 | Msa1153410 | 0.814673 | 1.366424e-51 | -8.615850e-47 |
| Msa0223260 | Msa1153410 | 0.861850 | 7.676342e-64 | -8.615850e-47 |
| Msa0479340 | Msa1153410 | 0.801407 | 9.137115e-49 | -8.615850e-47 |
| Msa1030970 | Msa1153410 | 0.802393 | 5.731612e-49 | -8.615850e-47 |
| Msa1075220 | Msa1153410 | -0.800795 | 1.218582e-48 | -8.615850e-47 |
| Msa0239800 | Msa1153410 | 0.805181 | 1.511262e-49 | -8.615850e-47 |
| Msa0258760 | Msa1153410 | 0.804918 | 1.714917e-49 | -8.615850e-47 |
| Msa0272830 | Msa1153410 | 0.821320 | 4.297941e-53 | -8.615850e-47 |
| Msa0317510 | Msa1153410 | 0.808631 | 2.816653e-50 | -8.615850e-47 |
| Msa0323080 | Msa1153410 | 0.810243 | 1.270208e-50 | -8.615850e-47 |
| Msa1153410 | Msa1156020 | 0.815293 | 9.958152e-52 | -8.615850e-47 |
| Msa1153410 | Msa1238930 | 0.808904 | 2.462421e-50 | -8.615850e-47 |
| Msa1153410 | Msa1284680 | 0.807774 | 4.288025e-50 | -8.615850e-47 |
| Msa1153410 | Msa1451620 | -0.806792 | 6.925959e-50 | -8.615850e-47 |
| Msa0523940 | Msa1153410 | 0.804774 | 1.838179e-49 | -8.615850e-47 |
| Msa0529040 | Msa1153410 | 0.801297 | 9.623003e-49 | -8.615850e-47 |
| Msa0532350 | Msa1153410 | 0.801223 | 9.964049e-49 | -8.615850e-47 |
| Msa0545700 | Msa1153410 | 0.816614 | 5.051433e-52 | -8.615850e-47 |
| Msa0893130 | Msa1153410 | 0.842897 | 1.953364e-58 | -8.615850e-47 |
| Msa0893140 | Msa1153410 | 0.815406 | 9.395344e-52 | -8.615850e-47 |
| Msa0924310 | Msa1153410 | 0.806965 | 6.364673e-50 | -8.615850e-47 |
| Msa0925250 | Msa1153410 | 0.805312 | 1.418761e-49 | -8.615850e-47 |
| Msa0925290 | Msa1153410 | 0.806090 | 9.739742e-50 | -8.615850e-47 |
| Msa0927380 | Msa1153410 | 0.803921 | 2.767549e-49 | -8.615850e-47 |
| Msa0953120 | Msa1153410 | 0.809353 | 1.973524e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1153410 | MtrunA17_Chr2g0322801 | 55.372 | 121 | 40 | 4 | 47 | 167 | 38 | 144 | 1.32e-28 | 111 |
| Msa1153410 | MtrunA17_Chr8g0338451 | 81.081 | 37 | 7 | 0 | 249 | 285 | 619 | 655 | 1.08e-12 | 68.2 |
| Msa1153410 | MtrunA17_Chr5g0441571 | 44.211 | 95 | 52 | 1 | 33 | 127 | 151 | 244 | 1.70e-12 | 67.4 |
| Msa1153410 | MtrunA17_Chr6g0471951 | 81.081 | 37 | 7 | 0 | 249 | 285 | 271 | 307 | 4.17e-12 | 66.2 |
| Msa1153410 | MtrunA17_Chr5g0441651 | 48.101 | 79 | 40 | 1 | 33 | 111 | 159 | 236 | 1.10e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1153410 | AT3G03800.2 | 51.724 | 58 | 28 | 0 | 109 | 166 | 82 | 139 | 6.51e-13 | 68.2 |
| Msa1153410 | AT3G03800.1 | 51.724 | 58 | 28 | 0 | 109 | 166 | 82 | 139 | 6.51e-13 | 68.2 |
| Msa1153410 | AT5G08080.5 | 52.000 | 50 | 24 | 0 | 108 | 157 | 80 | 129 | 2.46e-11 | 62.8 |
| Msa1153410 | AT5G08080.2 | 52.000 | 50 | 24 | 0 | 108 | 157 | 80 | 129 | 2.46e-11 | 62.8 |
| Msa1153410 | AT5G08080.1 | 52.000 | 50 | 24 | 0 | 108 | 157 | 80 | 129 | 4.05e-11 | 62.8 |
| Msa1153410 | AT5G08080.4 | 52.000 | 50 | 24 | 0 | 108 | 157 | 80 | 129 | 4.05e-11 | 62.8 |
| Msa1153410 | AT5G08080.3 | 52.000 | 50 | 24 | 0 | 108 | 157 | 91 | 140 | 4.70e-11 | 62.8 |
Find 68 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGTATTTGAAGGTGGTTTA+TGG | 0.199172 | 7_4:-40130268 | Msa1153410:intron |
| AGGTGGTTTATGGAGGTCTT+AGG | 0.224011 | 7_4:-40130258 | Msa1153410:CDS |
| CAGTTGAGTTGTTCTCATCT+TGG | 0.296449 | 7_4:+40129229 | None:intergenic |
| TTGCTGTTGGTTTAACTGTT+TGG | 0.304654 | 7_4:-40130460 | Msa1153410:CDS |
| GTCATTGACCCATGATTTGA+TGG | 0.313345 | 7_4:+40129146 | None:intergenic |
| CCATTGATGGACTTGAGATA+TGG | 0.314818 | 7_4:-40129173 | Msa1153410:CDS |
| GGGGATCTTGACAGAGTTCC+AGG | 0.316919 | 7_4:-40131596 | Msa1153410:CDS |
| CGTGGGTTATCAGTACTCTT+TGG | 0.318496 | 7_4:-40132959 | Msa1153410:intron |
| GATGGAGGAAGAAGGGAAAT+TGG | 0.330889 | 7_4:-40133678 | Msa1153410:CDS |
| GGTGGTTTATGGAGGTCTTA+GGG | 0.350016 | 7_4:-40130257 | Msa1153410:CDS |
| ATTTAATGTGTCTGATACTC+TGG | 0.365294 | 7_4:+40129079 | None:intergenic |
| GTGGAGAGAAGAGTTATTAC+AGG | 0.369427 | 7_4:-40131455 | Msa1153410:intron |
| CAATGACTTAAAAGATGTTT+AGG | 0.377845 | 7_4:-40129130 | Msa1153410:exon |
| CAAGATGAGAACAACTCAAC+TGG | 0.392091 | 7_4:-40129228 | Msa1153410:CDS |
| CGTCTATGTTTCTTAATCTC+AGG | 0.392267 | 7_4:-40132575 | Msa1153410:CDS |
| GACTCTCCAAAGGCCATTGA+TGG | 0.397359 | 7_4:-40129186 | Msa1153410:CDS |
| TTTGGAGGTTGTCTGGCATA+AGG | 0.397800 | 7_4:-40130442 | Msa1153410:CDS |
| TTAACTGTTTGGAGGTTGTC+TGG | 0.404618 | 7_4:-40130449 | Msa1153410:CDS |
| AATGGAGGGAGAGGAGAAGA+AGG | 0.408209 | 7_4:-40133711 | Msa1153410:CDS |
| CATTGATGGACTTGAGATAT+GGG | 0.415248 | 7_4:-40129172 | Msa1153410:CDS |
| AGAAGGGAAATTGGAGAAGA+AGG | 0.422017 | 7_4:-40133669 | Msa1153410:CDS |
| TTGGAGGTTGTCTGGCATAA+GGG | 0.438769 | 7_4:-40130441 | Msa1153410:CDS |
| TCAAGTCCATCAATGGCCTT+TGG | 0.439526 | 7_4:+40129180 | None:intergenic |
| AATTTCCCTTCTTCCTCCAT+CGG | 0.440960 | 7_4:+40133680 | None:intergenic |
| GTCTGGCATAAGGGAGAGGG+GGG | 0.453338 | 7_4:-40130432 | Msa1153410:CDS |
| GGTTGTCTGGCATAAGGGAG+AGG | 0.460846 | 7_4:-40130436 | Msa1153410:CDS |
| CATTCTTGCTCCGTCAATAC+CGG | 0.466523 | 7_4:+40131734 | None:intergenic |
| TTATGAAGAGGATTTGAAGC+AGG | 0.468923 | 7_4:-40132741 | Msa1153410:intron |
| TTTAAGAAGCGCAAGTCTCT+TGG | 0.484148 | 7_4:-40132479 | Msa1153410:CDS |
| GAAAAGGATATTGATGAGGT+TGG | 0.486934 | 7_4:-40131947 | Msa1153410:intron |
| CTGTTGGTTTAACTGTTTGG+AGG | 0.489137 | 7_4:-40130457 | Msa1153410:CDS |
| TATTTGAAGGTGGTTTATGG+AGG | 0.490552 | 7_4:-40130265 | Msa1153410:intron |
| TATGGGTTTCCATCAAATCA+TGG | 0.491136 | 7_4:-40129155 | Msa1153410:CDS |
| AGATGAATATCGTGAGGTTG+TGG | 0.491519 | 7_4:-40131474 | Msa1153410:CDS |
| CCATATCTCAAGTCCATCAA+TGG | 0.492238 | 7_4:+40129173 | None:intergenic |
| AAGAAGCCGATGGAGGAAGA+AGG | 0.492336 | 7_4:-40133686 | Msa1153410:CDS |
| CAAAAGCCTGGCTGTGAGAA+GGG | 0.499127 | 7_4:-40131759 | Msa1153410:CDS |
| TGTCTGGCATAAGGGAGAGG+GGG | 0.500719 | 7_4:-40130433 | Msa1153410:CDS |
| CCGGTTCCCTTCTCACAGCC+AGG | 0.501105 | 7_4:+40131753 | None:intergenic |
| ATATTTCACATATTATACTC+TGG | 0.501147 | 7_4:+40129107 | None:intergenic |
| CCTGGCTGTGAGAAGGGAAC+CGG | 0.506291 | 7_4:-40131753 | Msa1153410:CDS |
| GAACGAGAGAATGGAGGGAG+AGG | 0.515280 | 7_4:-40133720 | Msa1153410:exon |
| TTTCTCTGCTGCTGTGACCG+TGG | 0.515852 | 7_4:-40130377 | Msa1153410:CDS |
| AAACAGAACGAGAGAATGGA+GGG | 0.517664 | 7_4:-40133725 | Msa1153410:exon |
| GAGAAGGGAACCGGTATTGA+CGG | 0.524006 | 7_4:-40131744 | Msa1153410:CDS |
| CTTTGGTTCATGCAGCTGCT+CGG | 0.524841 | 7_4:-40132942 | Msa1153410:intron |
| CTAAACAATAGACAAAAGCC+TGG | 0.535553 | 7_4:-40131771 | Msa1153410:CDS |
| TTGTCTGGCATAAGGGAGAG+GGG | 0.540555 | 7_4:-40130434 | Msa1153410:CDS |
| ACAAAAGCCTGGCTGTGAGA+AGG | 0.542434 | 7_4:-40131760 | Msa1153410:CDS |
| GTTGTCTGGCATAAGGGAGA+GGG | 0.544012 | 7_4:-40130435 | Msa1153410:CDS |
| CAACATTGAAGATTATGAAG+AGG | 0.549840 | 7_4:-40132753 | Msa1153410:CDS |
| ATGTTTCAAAACAACATACC+TGG | 0.557954 | 7_4:+40131578 | None:intergenic |
| GTCTCTTGGTGCCTTAGCGA+TGG | 0.562521 | 7_4:-40132465 | Msa1153410:intron |
| GAAGAAGGAAAAGAAGCCGA+TGG | 0.563967 | 7_4:-40133696 | Msa1153410:CDS |
| ATGGGTTTCCATCAAATCAT+GGG | 0.572571 | 7_4:-40129154 | Msa1153410:CDS |
| AGAAGCCGATGGAGGAAGAA+GGG | 0.579655 | 7_4:-40133685 | Msa1153410:CDS |
| AATTAAGTTCAGAGGAGTAG+AGG | 0.591705 | 7_4:-40132789 | Msa1153410:CDS |
| AAAACAGAACGAGAGAATGG+AGG | 0.592760 | 7_4:-40133726 | Msa1153410:exon |
| AGAGCTGCAATTAAGTTCAG+AGG | 0.598621 | 7_4:-40132797 | Msa1153410:CDS |
| TGGGACTCAACATCTCATGT+TGG | 0.604260 | 7_4:-40129208 | Msa1153410:CDS |
| TCTCATGTTGGACTCTCCAA+AGG | 0.622034 | 7_4:-40129196 | Msa1153410:CDS |
| AAGATGAGAACAACTCAACT+GGG | 0.640277 | 7_4:-40129227 | Msa1153410:CDS |
| CTTGATATATTGCAGATGCA+TGG | 0.640775 | 7_4:-40129259 | Msa1153410:intron |
| GAAGGAAAAGAAGCCGATGG+AGG | 0.645079 | 7_4:-40133693 | Msa1153410:CDS |
| ACAACAACACAACAGGTCCA+CGG | 0.654001 | 7_4:+40130360 | None:intergenic |
| GATGGAAAAGGATATTGATG+AGG | 0.655016 | 7_4:-40131951 | Msa1153410:intron |
| GGTTGGAAAGATTGCACATG+TGG | 0.657598 | 7_4:-40131930 | Msa1153410:CDS |
| AATACAAGATGAATATCGTG+AGG | 0.666598 | 7_4:-40131480 | Msa1153410:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATTAAGAAATTGAAATT+GGG | + | chr7_4:40129212-40129231 | None:intergenic | 15.0% |
| !! | AATTTCAATTTCTTAATGAA+GGG | - | chr7_4:40129212-40129231 | Msa1153410:CDS | 15.0% |
| !! | AAATTGAATGTAAAAATTGT+AGG | - | chr7_4:40129705-40129724 | Msa1153410:intron | 15.0% |
| !! | AATTGAATGTAAAAATTGTA+GGG | - | chr7_4:40129706-40129725 | Msa1153410:intron | 15.0% |
| !!! | TTCATTCATTCTTTTATTTA+TGG | - | chr7_4:40129890-40129909 | Msa1153410:intron | 15.0% |
| !! | AATAATTGATTGAAAACTAT+AGG | + | chr7_4:40130114-40130133 | None:intergenic | 15.0% |
| !! | TTCAAGATACAAAAAAAAAA+AGG | + | chr7_4:40130138-40130157 | None:intergenic | 15.0% |
| !! | TGTTATATAGATTTCAAATA+TGG | - | chr7_4:40130946-40130965 | Msa1153410:intron | 15.0% |
| !!! | TTTACATTGATTGATTTTAT+TGG | - | chr7_4:40131702-40131721 | Msa1153410:intron | 15.0% |
| !!! | TTACATTGATTGATTTTATT+GGG | - | chr7_4:40131703-40131722 | Msa1153410:intron | 15.0% |
| !!! | TTACATTGATTGATTTTATT+GGG | - | chr7_4:40131703-40131722 | Msa1153410:intron | 15.0% |
| !! | AAAATTTAATACATAGAGAA+GGG | + | chr7_4:40131945-40131964 | None:intergenic | 15.0% |
| !! | TAAAATTTAATACATAGAGA+AGG | + | chr7_4:40131946-40131965 | None:intergenic | 15.0% |
| !!! | GTTTTTTCTGATTATTTTAA+AGG | - | chr7_4:40133019-40133038 | Msa1153410:intron | 15.0% |
| !! | TCATTAAGAAATTGAAATTG+GGG | + | chr7_4:40129211-40129230 | None:intergenic | 20.0% |
| !! | CTTCATTAAGAAATTGAAAT+TGG | + | chr7_4:40129213-40129232 | None:intergenic | 20.0% |
| !! | CAATTTCAATTTCTTAATGA+AGG | - | chr7_4:40129211-40129230 | Msa1153410:CDS | 20.0% |
| !! | AATTAAGCTTTCTTTGAATA+AGG | + | chr7_4:40129265-40129284 | None:intergenic | 20.0% |
| !! | TATGATAATTTCATCTCATA+AGG | - | chr7_4:40129658-40129677 | Msa1153410:intron | 20.0% |
| !!! | TGTAATTGTTTTATGATGAA+TGG | - | chr7_4:40129744-40129763 | Msa1153410:intron | 20.0% |
| !!! | AATTTTAACTTCAATGTGAA+TGG | - | chr7_4:40130523-40130542 | Msa1153410:intron | 20.0% |
| !! | ATGGATAAAAAATAGTTAAC+CGG | - | chr7_4:40130965-40130984 | Msa1153410:intron | 20.0% |
| !!! | ACTTTGTATATCATGAATTT+TGG | + | chr7_4:40131436-40131455 | None:intergenic | 20.0% |
| !! | AAGTTTACATTTCAAAATAC+AGG | + | chr7_4:40131540-40131559 | None:intergenic | 20.0% |
| !!! | CTTACATTGATTGATTTTAT+TGG | - | chr7_4:40131751-40131770 | Msa1153410:CDS | 20.0% |
| !! | CTTCTGTTTAATAATTTCAA+GGG | - | chr7_4:40132124-40132143 | Msa1153410:intron | 20.0% |
| !!! | TTCTTTTTCATTTTCTGTTA+TGG | - | chr7_4:40132481-40132500 | Msa1153410:CDS | 20.0% |
| !!! | CCATTTGCATTTTTTTTAAA+GGG | + | chr7_4:40132778-40132797 | None:intergenic | 20.0% |
| !!! | CCTTTAAAAAAAATGCAAAT+GGG | - | chr7_4:40132776-40132795 | Msa1153410:CDS | 20.0% |
| !!! | CTTTAAAAAAAATGCAAATG+GGG | - | chr7_4:40132777-40132796 | Msa1153410:CDS | 20.0% |
| !!! | TCTGAATAATTGTTTTTGAT+CGG | - | chr7_4:40132978-40132997 | Msa1153410:intron | 20.0% |
| !! | AAACATAGATTTACATTCAA+AGG | + | chr7_4:40133143-40133162 | None:intergenic | 20.0% |
| !!! | TTCATGATTTGATTTAGTTA+TGG | - | chr7_4:40133288-40133307 | Msa1153410:intron | 20.0% |
| !! | AAAAATGTAATCAGCTATTT+AGG | - | chr7_4:40133359-40133378 | Msa1153410:intron | 20.0% |
| !! | ATATTTCACATATTATACTC+TGG | + | chr7_4:40133674-40133693 | None:intergenic | 20.0% |
| ! | GTTTGGATGAAATTGAAATT+GGG | + | chr7_4:40129173-40129192 | None:intergenic | 25.0% |
| ! | AGAAAGCTTAATTGAAAGTA+TGG | - | chr7_4:40129272-40129291 | Msa1153410:intron | 25.0% |
| !! | GAAAGCTTAATTGAAAGTAT+GGG | - | chr7_4:40129273-40129292 | Msa1153410:intron | 25.0% |
| !! | AAAGCTTAATTGAAAGTATG+GGG | - | chr7_4:40129274-40129293 | Msa1153410:intron | 25.0% |
| ! | TGTAAATCATTTCTGTTTGA+TGG | - | chr7_4:40129358-40129377 | Msa1153410:intron | 25.0% |
| ! | TCTGTTTAAGAAGATACATA+GGG | - | chr7_4:40129407-40129426 | Msa1153410:intron | 25.0% |
| ! | AAAAAGCTATTTGACAATAC+TGG | + | chr7_4:40129529-40129548 | None:intergenic | 25.0% |
| !! | TCTGAAAATCAATTTGTTTC+AGG | - | chr7_4:40129767-40129786 | Msa1153410:intron | 25.0% |
| !!! | ATGTTGAGAATATTTTTTCG+TGG | - | chr7_4:40129801-40129820 | Msa1153410:intron | 25.0% |
| !!! | TGTTGAGAATATTTTTTCGT+GGG | - | chr7_4:40129802-40129821 | Msa1153410:intron | 25.0% |
| ! | TGTTGTGATTTAAATGAGTT+TGG | - | chr7_4:40130159-40130178 | Msa1153410:intron | 25.0% |
| !! | TAATGCTCATAAGATTTTAC+TGG | - | chr7_4:40130773-40130792 | Msa1153410:intron | 25.0% |
| ! | TGGATAAAAAATAGTTAACC+GGG | - | chr7_4:40130966-40130985 | Msa1153410:intron | 25.0% |
| ! | AACACAGTTAACTTTATCAA+GGG | + | chr7_4:40131364-40131383 | None:intergenic | 25.0% |
| ! | TAAAATTCATGATATGCACA+AGG | - | chr7_4:40131485-40131504 | Msa1153410:CDS | 25.0% |
| !! | TGAAATGTAAACTTTGAGAA+AGG | - | chr7_4:40131546-40131565 | Msa1153410:intron | 25.0% |
| !! | AAGGTTTGAACATGTAATTT+TGG | - | chr7_4:40131664-40131683 | Msa1153410:intron | 25.0% |
| ! | CAATGTAAGATACAACAAAA+GGG | + | chr7_4:40131740-40131759 | None:intergenic | 25.0% |
| ! | TCAATGTAAGATACAACAAA+AGG | + | chr7_4:40131741-40131760 | None:intergenic | 25.0% |
| ! | AGAAGTTCGATAAATGATAA+TGG | - | chr7_4:40131857-40131876 | Msa1153410:intron | 25.0% |
| ! | GCTTCTGTTTAATAATTTCA+AGG | - | chr7_4:40132123-40132142 | Msa1153410:intron | 25.0% |
| ! | TTTAATAATTTCAAGGGATG+TGG | - | chr7_4:40132130-40132149 | Msa1153410:intron | 25.0% |
| !! | CCCTTTAAAAAAAATGCAAA+TGG | - | chr7_4:40132775-40132794 | Msa1153410:CDS | 25.0% |
| !!! | CCCATTTGCATTTTTTTTAA+AGG | + | chr7_4:40132779-40132798 | None:intergenic | 25.0% |
| ! | GAAACAAAAGACTCAAAAAA+CGG | + | chr7_4:40132909-40132928 | None:intergenic | 25.0% |
| !!! | AAAGGTTTGATTTTCCTTTT+TGG | - | chr7_4:40133037-40133056 | Msa1153410:intron | 25.0% |
| ! | AGCAAAAAAACAAACCAAAA+AGG | + | chr7_4:40133054-40133073 | None:intergenic | 25.0% |
| !! | ATCATTCATGATTTTTGTAG+TGG | - | chr7_4:40133208-40133227 | Msa1153410:intron | 25.0% |
| ! | AGATAATTTGAATCATACCT+TGG | - | chr7_4:40133264-40133283 | Msa1153410:intron | 25.0% |
| ! | TAAATCAAATCATGAAACCA+AGG | + | chr7_4:40133284-40133303 | None:intergenic | 25.0% |
| ! | ATCTCTAATGTGTATCTATT+CGG | + | chr7_4:40133429-40133448 | None:intergenic | 25.0% |
| ! | CAATGACTTAAAAGATGTTT+AGG | - | chr7_4:40133648-40133667 | Msa1153410:intron | 25.0% |
| GGTTTGGATGAAATTGAAAT+TGG | + | chr7_4:40129174-40129193 | None:intergenic | 30.0% | |
| ! | AAGCTTAATTGAAAGTATGG+GGG | - | chr7_4:40129275-40129294 | Msa1153410:intron | 30.0% |
| GTCTGTTTAAGAAGATACAT+AGG | - | chr7_4:40129406-40129425 | Msa1153410:intron | 30.0% | |
| AGATCAGATACAAAGGAAAA+TGG | + | chr7_4:40129494-40129513 | None:intergenic | 30.0% | |
| ! | ATTTTCCTTTGTATCTGATC+TGG | - | chr7_4:40129493-40129512 | Msa1153410:intron | 30.0% |
| ! | TTTTACCAGATCAGATACAA+AGG | + | chr7_4:40129501-40129520 | None:intergenic | 30.0% |
| CAACATTGAAGATTATGAAG+AGG | - | chr7_4:40130025-40130044 | Msa1153410:intron | 30.0% | |
| TGTGATTTAAATGAGTTTGG+AGG | - | chr7_4:40130162-40130181 | Msa1153410:intron | 30.0% | |
| AGTTTGGAGGAATTAATTTC+AGG | - | chr7_4:40130175-40130194 | Msa1153410:intron | 30.0% | |
| !!! | CAACTCTTTCAAGTTTTTCA+TGG | - | chr7_4:40130229-40130248 | Msa1153410:intron | 30.0% |
| ! | AAGTTTTTCATGGCATACAA+AGG | - | chr7_4:40130239-40130258 | Msa1153410:intron | 30.0% |
| !!! | GGCATACAAAGGATTTTTTA+TGG | - | chr7_4:40130250-40130269 | Msa1153410:CDS | 30.0% |
| AAAAAAACTTACCATCGCTA+AGG | + | chr7_4:40130327-40130346 | None:intergenic | 30.0% | |
| !! | TAGTTCTGATTATTGTGATC+TGG | - | chr7_4:40130403-40130422 | Msa1153410:CDS | 30.0% |
| ! | TCATAAGATTTTACTGGTAC+TGG | - | chr7_4:40130779-40130798 | Msa1153410:intron | 30.0% |
| CTGAATCATAACAATTGTCT+TGG | - | chr7_4:40130805-40130824 | Msa1153410:intron | 30.0% | |
| ATCATAACAATTGTCTTGGA+TGG | - | chr7_4:40130809-40130828 | Msa1153410:intron | 30.0% | |
| ATTCTGCATAAAACATATCC+CGG | + | chr7_4:40130987-40131006 | None:intergenic | 30.0% | |
| AGTTCCTTGACTAAAAAGTT+CGG | - | chr7_4:40131161-40131180 | Msa1153410:intron | 30.0% | |
| ATGTTTCAAAACAACATACC+TGG | + | chr7_4:40131203-40131222 | None:intergenic | 30.0% | |
| TGAGAAGATAGACATAAACT+TGG | + | chr7_4:40131247-40131266 | None:intergenic | 30.0% | |
| AATACAAGATGAATATCGTG+AGG | - | chr7_4:40131298-40131317 | Msa1153410:intron | 30.0% | |
| ACACAGTTAACTTTATCAAG+GGG | + | chr7_4:40131363-40131382 | None:intergenic | 30.0% | |
| CAACACAGTTAACTTTATCA+AGG | + | chr7_4:40131365-40131384 | None:intergenic | 30.0% | |
| ! | GTAGTACTTTAGAAATTTGC+TGG | - | chr7_4:40131392-40131411 | Msa1153410:intron | 30.0% |
| CATTTCAAAATACAGGCAAA+TGG | + | chr7_4:40131533-40131552 | None:intergenic | 30.0% | |
| ATCTACTTTGATATGACTCA+TGG | - | chr7_4:40131618-40131637 | Msa1153410:CDS | 30.0% | |
| ATTACATGTTCAAACCTTTG+TGG | + | chr7_4:40131662-40131681 | None:intergenic | 30.0% | |
| TGCACTTAGTAACAACAAAA+GGG | + | chr7_4:40131789-40131808 | None:intergenic | 30.0% | |
| !! | CAAAGTATATTGATGATGAG+TGG | - | chr7_4:40131882-40131901 | Msa1153410:intron | 30.0% |
| TTCTAAACACCCAAACAAAT+AGG | - | chr7_4:40131917-40131936 | Msa1153410:CDS | 30.0% | |
| GTTTCAGTTACTTGCATAAT+AGG | - | chr7_4:40132033-40132052 | Msa1153410:intron | 30.0% | |
| !! | TTTGTGATTAGTTTGAGCTA+TGG | - | chr7_4:40132565-40132584 | Msa1153410:CDS | 30.0% |
| !!! | TTTAGCTTTTGCTTCTGTTA+TGG | - | chr7_4:40132663-40132682 | Msa1153410:intron | 30.0% |
| !! | TTAGCTTTTGCTTCTGTTAT+GGG | - | chr7_4:40132664-40132683 | Msa1153410:intron | 30.0% |
| ACCATTGATAAGCTAGAAAA+CGG | + | chr7_4:40132830-40132849 | None:intergenic | 30.0% | |
| !!! | TTTTTGATCGGTGTTGATAT+TGG | - | chr7_4:40132990-40133009 | Msa1153410:intron | 30.0% |
| !!! | GTTTGTTTTTTTGCTGATTC+TGG | - | chr7_4:40133059-40133078 | Msa1153410:intron | 30.0% |
| !!! | ATGATTTTTGTAGTGGACAA+AGG | - | chr7_4:40133215-40133234 | Msa1153410:intron | 30.0% |
| !! | GAATAACCAACCACTTTTAT+TGG | + | chr7_4:40133329-40133348 | None:intergenic | 30.0% |
| ! | ATTAGAGATTCATGTCGATT+CGG | - | chr7_4:40133440-40133459 | Msa1153410:intron | 30.0% |
| ATTTAATGTGTCTGATACTC+TGG | + | chr7_4:40133702-40133721 | None:intergenic | 30.0% | |
| AGAAAAACAGAACGAGAGAA+TGG | - | chr7_4:40129049-40129068 | Msa1153410:three_prime_UTR | 35.0% | |
| ! | GAAGGCAAGCTTCAATTTTA+AGG | - | chr7_4:40129127-40129146 | Msa1153410:exon | 35.0% |
| TGAAATTGGGCTGATAGAAA+GGG | + | chr7_4:40129160-40129179 | None:intergenic | 35.0% | |
| TTGAAATTGGGCTGATAGAA+AGG | + | chr7_4:40129161-40129180 | None:intergenic | 35.0% | |
| ATTGAAATTGGGGCTGAAAA+GGG | + | chr7_4:40129201-40129220 | None:intergenic | 35.0% | |
| AATTGAAATTGGGGCTGAAA+AGG | + | chr7_4:40129202-40129221 | None:intergenic | 35.0% | |
| ! | TTAATTGAAAGTATGGGGGT+TGG | - | chr7_4:40129279-40129298 | Msa1153410:intron | 35.0% |
| ! | TAATTGAAAGTATGGGGGTT+GGG | - | chr7_4:40129280-40129299 | Msa1153410:intron | 35.0% |
| GAGGAAGAAACAAGAAGAAT+TGG | - | chr7_4:40129313-40129332 | Msa1153410:intron | 35.0% | |
| GAAGAAACAAGAAGAATTGG+AGG | - | chr7_4:40129316-40129335 | Msa1153410:intron | 35.0% | |
| TAAGAAGATACATAGGGACA+TGG | - | chr7_4:40129413-40129432 | Msa1153410:intron | 35.0% | |
| ATGGTTGAATGTGATCTGAA+TGG | - | chr7_4:40129432-40129451 | Msa1153410:intron | 35.0% | |
| AATTAAGTTCAGAGGAGTAG+AGG | - | chr7_4:40129989-40130008 | Msa1153410:intron | 35.0% | |
| ! | TTATGAAGAGGATTTGAAGC+AGG | - | chr7_4:40130037-40130056 | Msa1153410:intron | 35.0% |
| ! | ATTTGAAGCAGGTGAGTTAT+GGG | - | chr7_4:40130048-40130067 | Msa1153410:intron | 35.0% |
| CGTCTATGTTTCTTAATCTC+AGG | - | chr7_4:40130203-40130222 | Msa1153410:intron | 35.0% | |
| ! | CAAGTTTCAGTATTTTCGCA+TGG | - | chr7_4:40130606-40130625 | Msa1153410:intron | 35.0% |
| CGCATGGAGTATAAGAAAAT+TGG | - | chr7_4:40130622-40130641 | Msa1153410:intron | 35.0% | |
| ! | ATAGCAATAGCAATTTTCGC+AGG | - | chr7_4:40130649-40130668 | Msa1153410:intron | 35.0% |
| !! | ACAAAAGCATTTGCCATGAA+AGG | - | chr7_4:40130698-40130717 | Msa1153410:intron | 35.0% |
| CCTTGTAACAATACCTTTCA+TGG | + | chr7_4:40130714-40130733 | None:intergenic | 35.0% | |
| !! | CCATGAAAGGTATTGTTACA+AGG | - | chr7_4:40130711-40130730 | Msa1153410:intron | 35.0% |
| ! | GGCAATGTCTGTAATTCTTT+TGG | - | chr7_4:40130732-40130751 | Msa1153410:intron | 35.0% |
| ACAATTGTCTTGGATGGAAA+AGG | - | chr7_4:40130815-40130834 | Msa1153410:intron | 35.0% | |
| GATGGAAAAGGATATTGATG+AGG | - | chr7_4:40130827-40130846 | Msa1153410:intron | 35.0% | |
| GAAAAGGATATTGATGAGGT+TGG | - | chr7_4:40130831-40130850 | Msa1153410:intron | 35.0% | |
| CTAAACAATAGACAAAAGCC+TGG | - | chr7_4:40131007-40131026 | Msa1153410:intron | 35.0% | |
| GTTCCTTGACTAAAAAGTTC+GGG | - | chr7_4:40131162-40131181 | Msa1153410:intron | 35.0% | |
| TTCCTTGACTAAAAAGTTCG+GGG | - | chr7_4:40131163-40131182 | Msa1153410:intron | 35.0% | |
| AAGTTAACTGTGTTGCACTA+CGG | - | chr7_4:40131370-40131389 | Msa1153410:intron | 35.0% | |
| ! | GTAAACTTTGAGAAAGGAGA+AGG | - | chr7_4:40131552-40131571 | Msa1153410:intron | 35.0% |
| ! | AAGGAAAGTTGAGATCCTTT+TGG | - | chr7_4:40131571-40131590 | Msa1153410:intron | 35.0% |
| ! | CATGGAATGAGATAGCTTTT+TGG | - | chr7_4:40131636-40131655 | Msa1153410:intron | 35.0% |
| CTGCACTTAGTAACAACAAA+AGG | + | chr7_4:40131790-40131809 | None:intergenic | 35.0% | |
| !!! | CTTTTGTTGTTACTAAGTGC+AGG | - | chr7_4:40131788-40131807 | Msa1153410:intron | 35.0% |
| AGAAGGGATCCTATTTGTTT+GGG | + | chr7_4:40131929-40131948 | None:intergenic | 35.0% | |
| ! | ATGATATCAACGTTTTGTCG+TGG | - | chr7_4:40132220-40132239 | Msa1153410:intron | 35.0% |
| ! | GTCTGTTTTACTAATGGTGT+TGG | - | chr7_4:40132277-40132296 | Msa1153410:intron | 35.0% |
| !! | TTGCTGTTGGTTTAACTGTT+TGG | - | chr7_4:40132318-40132337 | Msa1153410:intron | 35.0% |
| ! | TCATTTTCTGTTATGGACTC+TGG | - | chr7_4:40132488-40132507 | Msa1153410:CDS | 35.0% |
| GTGTATTTGAAGGTGGTTTA+TGG | - | chr7_4:40132510-40132529 | Msa1153410:CDS | 35.0% | |
| TATTTGAAGGTGGTTTATGG+AGG | - | chr7_4:40132513-40132532 | Msa1153410:CDS | 35.0% | |
| !! | TTAGGGTTTTTCGGTTGTTT+GGG | - | chr7_4:40132538-40132557 | Msa1153410:CDS | 35.0% |
| ! | TGAGCTATGGTTGTGTATTT+TGG | - | chr7_4:40132578-40132597 | Msa1153410:CDS | 35.0% |
| ! | TTTTGCTTCTGTTATGGGTT+GGG | - | chr7_4:40132669-40132688 | Msa1153410:intron | 35.0% |
| ! | GGACGAAAGAAAAGTACAAT+AGG | + | chr7_4:40132715-40132734 | None:intergenic | 35.0% |
| !!! | TCCGTTTTCTAGCTTATCAA+TGG | - | chr7_4:40132826-40132845 | Msa1153410:intron | 35.0% |
| !!! | TTTCTCTGTTTCTGCGATTT+TGG | - | chr7_4:40132925-40132944 | Msa1153410:intron | 35.0% |
| TTGGCGATAGATTTCATGTT+AGG | - | chr7_4:40132944-40132963 | Msa1153410:CDS | 35.0% | |
| TGGCGATAGATTTCATGTTA+GGG | - | chr7_4:40132945-40132964 | Msa1153410:CDS | 35.0% | |
| ACATTCAAAGGACTCAAGTT+AGG | + | chr7_4:40133131-40133150 | None:intergenic | 35.0% | |
| TGTAACACTGCCAATAAAAG+TGG | - | chr7_4:40133316-40133335 | Msa1153410:intron | 35.0% | |
| CTTGATATATTGCAGATGCA+TGG | - | chr7_4:40133519-40133538 | Msa1153410:intron | 35.0% | |
| AAGATGAGAACAACTCAACT+GGG | - | chr7_4:40133551-40133570 | Msa1153410:intron | 35.0% | |
| !! | CATTGATGGACTTGAGATAT+GGG | - | chr7_4:40133606-40133625 | Msa1153410:intron | 35.0% |
| TATGGGTTTCCATCAAATCA+TGG | - | chr7_4:40133623-40133642 | Msa1153410:intron | 35.0% | |
| ATGGGTTTCCATCAAATCAT+GGG | - | chr7_4:40133624-40133643 | Msa1153410:intron | 35.0% | |
| TGCGCAAAAACAAACAAACA+TGG | + | chr7_4:40133742-40133761 | None:intergenic | 35.0% | |
| AAAACAGAACGAGAGAATGG+AGG | - | chr7_4:40129052-40129071 | Msa1153410:three_prime_UTR | 40.0% | |
| AAACAGAACGAGAGAATGGA+GGG | - | chr7_4:40129053-40129072 | Msa1153410:three_prime_UTR | 40.0% | |
| AATTTCCCTTCTTCCTCCAT+CGG | + | chr7_4:40129101-40129120 | None:intergenic | 40.0% | |
| AGAAGGGAAATTGGAGAAGA+AGG | - | chr7_4:40129109-40129128 | Msa1153410:three_prime_UTR | 40.0% | |
| AGAGCTGCAATTAAGTTCAG+AGG | - | chr7_4:40129981-40130000 | Msa1153410:intron | 40.0% | |
| ! | GATTTGAAGCAGGTGAGTTA+TGG | - | chr7_4:40130047-40130066 | Msa1153410:intron | 40.0% |
| ! | TTTGAAGCAGGTGAGTTATG+GGG | - | chr7_4:40130049-40130068 | Msa1153410:intron | 40.0% |
| ! | TTTAAGAAGCGCAAGTCTCT+TGG | - | chr7_4:40130299-40130318 | Msa1153410:intron | 40.0% |
| ! | ATTTTCGCAGGAAGCTAATG+AGG | - | chr7_4:40130661-40130680 | Msa1153410:intron | 40.0% |
| GTCAAGGAACTGCAATTTCA+AGG | + | chr7_4:40131152-40131171 | None:intergenic | 40.0% | |
| !! | ATCCCCGAACTTTTTAGTCA+AGG | + | chr7_4:40131168-40131187 | None:intergenic | 40.0% |
| AGATGAATATCGTGAGGTTG+TGG | - | chr7_4:40131304-40131323 | Msa1153410:intron | 40.0% | |
| GTGGAGAGAAGAGTTATTAC+AGG | - | chr7_4:40131323-40131342 | Msa1153410:intron | 40.0% | |
| GCAGAATAAGTGTGACCAAA+AGG | + | chr7_4:40131589-40131608 | None:intergenic | 40.0% | |
| !! | AGATAGCTTTTTGGCCACAA+AGG | - | chr7_4:40131645-40131664 | Msa1153410:intron | 40.0% |
| !! | ATTGATGATGAGTGGTGAAC+AGG | - | chr7_4:40131890-40131909 | Msa1153410:intron | 40.0% |
| GAGAAGGGATCCTATTTGTT+TGG | + | chr7_4:40131930-40131949 | None:intergenic | 40.0% | |
| ! | TCTTTTCCAAGCTGAGATCA+AGG | - | chr7_4:40132089-40132108 | Msa1153410:intron | 40.0% |
| ! | CTTTTCCAAGCTGAGATCAA+GGG | - | chr7_4:40132090-40132109 | Msa1153410:intron | 40.0% |
| TTATTCCCTTGATCTCAGCT+TGG | + | chr7_4:40132098-40132117 | None:intergenic | 40.0% | |
| AGTGTTTAATAGCCACAACC+CGG | - | chr7_4:40132179-40132198 | Msa1153410:intron | 40.0% | |
| TCCACAATTTAGTCGAGATC+CGG | + | chr7_4:40132201-40132220 | None:intergenic | 40.0% | |
| CATTAGTAAAACAGACGCAG+AGG | + | chr7_4:40132273-40132292 | None:intergenic | 40.0% | |
| ! | CTCTGCGTCTGTTTTACTAA+TGG | - | chr7_4:40132271-40132290 | Msa1153410:intron | 40.0% |
| ACAGCAAAAGACATTCCCTA+GGG | + | chr7_4:40132305-40132324 | None:intergenic | 40.0% | |
| AACAGCAAAAGACATTCCCT+AGG | + | chr7_4:40132306-40132325 | None:intergenic | 40.0% | |
| !! | TAGGGAATGTCTTTTGCTGT+TGG | - | chr7_4:40132305-40132324 | Msa1153410:intron | 40.0% |
| !! | CTGTTGGTTTAACTGTTTGG+AGG | - | chr7_4:40132321-40132340 | Msa1153410:intron | 40.0% |
| TTAACTGTTTGGAGGTTGTC+TGG | - | chr7_4:40132329-40132348 | Msa1153410:intron | 40.0% | |
| GAAAAACAGCTGCTGCTAAT+TGG | + | chr7_4:40132385-40132404 | None:intergenic | 40.0% | |
| TACAGACACAACAACACAAC+AGG | + | chr7_4:40132428-40132447 | None:intergenic | 40.0% | |
| ATGGACTCTGGTGTATTTGA+AGG | - | chr7_4:40132500-40132519 | Msa1153410:CDS | 40.0% | |
| ! | ATGGAGGTCTTAGGGTTTTT+CGG | - | chr7_4:40132529-40132548 | Msa1153410:CDS | 40.0% |
| !! | CTTAGGGTTTTTCGGTTGTT+TGG | - | chr7_4:40132537-40132556 | Msa1153410:CDS | 40.0% |
| !! | TGCACATAACTTGCTTCTGT+CGG | - | chr7_4:40132622-40132641 | Msa1153410:intron | 40.0% |
| !! | AACTTGCTTCTGTCGGATTT+TGG | - | chr7_4:40132629-40132648 | Msa1153410:intron | 40.0% |
| ! | ACTTGCTTCTGTCGGATTTT+GGG | - | chr7_4:40132630-40132649 | Msa1153410:intron | 40.0% |
| ! | CTTTTGCTTCTGTTATGGGT+TGG | - | chr7_4:40132668-40132687 | Msa1153410:intron | 40.0% |
| GGCGATAGATTTCATGTTAG+GGG | - | chr7_4:40132946-40132965 | Msa1153410:CDS | 40.0% | |
| ! | GCTGATTCTGGTCTGTTATT+TGG | - | chr7_4:40133071-40133090 | Msa1153410:intron | 40.0% |
| TCAAAGGACTCAAGTTAGGT+TGG | + | chr7_4:40133127-40133146 | None:intergenic | 40.0% | |
| ACACTGCCAATAAAAGTGGT+TGG | - | chr7_4:40133320-40133339 | Msa1153410:intron | 40.0% | |
| ! | CAGTTGAGTTGTTCTCATCT+TGG | + | chr7_4:40133552-40133571 | None:intergenic | 40.0% |
| CAAGATGAGAACAACTCAAC+TGG | - | chr7_4:40133550-40133569 | Msa1153410:intron | 40.0% | |
| CCATATCTCAAGTCCATCAA+TGG | + | chr7_4:40133608-40133627 | None:intergenic | 40.0% | |
| !! | CCATTGATGGACTTGAGATA+TGG | - | chr7_4:40133605-40133624 | Msa1153410:intron | 40.0% |
| GTCATTGACCCATGATTTGA+TGG | + | chr7_4:40133635-40133654 | None:intergenic | 40.0% | |
| GAAGAAGGAAAAGAAGCCGA+TGG | - | chr7_4:40129082-40129101 | Msa1153410:three_prime_UTR | 45.0% | |
| GATGGAGGAAGAAGGGAAAT+TGG | - | chr7_4:40129100-40129119 | Msa1153410:three_prime_UTR | 45.0% | |
| ATTGGGGCTGAAAAGGGTTA+GGG | + | chr7_4:40129195-40129214 | None:intergenic | 45.0% | |
| AATTGGGGCTGAAAAGGGTT+AGG | + | chr7_4:40129196-40129215 | None:intergenic | 45.0% | |
| ! | GTGATCTGAATGGTGCTGAA+TGG | - | chr7_4:40129442-40129461 | Msa1153410:intron | 45.0% |
| ! | CGTGGGTTATCAGTACTCTT+TGG | - | chr7_4:40129819-40129838 | Msa1153410:intron | 45.0% |
| GGTTGGAAAGATTGCACATG+TGG | - | chr7_4:40130848-40130867 | Msa1153410:intron | 45.0% | |
| CATTCTTGCTCCGTCAATAC+CGG | + | chr7_4:40131047-40131066 | None:intergenic | 45.0% | |
| !! | TGTGGATGTTGTGACTTGCT+AGG | - | chr7_4:40132148-40132167 | Msa1153410:intron | 45.0% |
| CCACAATTTAGTCGAGATCC+GGG | + | chr7_4:40132200-40132219 | None:intergenic | 45.0% | |
| TTTGGAGGTTGTCTGGCATA+AGG | - | chr7_4:40132336-40132355 | Msa1153410:intron | 45.0% | |
| TTGGAGGTTGTCTGGCATAA+GGG | - | chr7_4:40132337-40132356 | Msa1153410:intron | 45.0% | |
| ACAACAACACAACAGGTCCA+CGG | + | chr7_4:40132421-40132440 | None:intergenic | 45.0% | |
| TTGTGTCTGTATAGCTGCTG+AGG | - | chr7_4:40132437-40132456 | Msa1153410:intron | 45.0% | |
| TGTGTCTGTATAGCTGCTGA+GGG | - | chr7_4:40132438-40132457 | Msa1153410:intron | 45.0% | |
| GACTCTGGTGTATTTGAAGG+TGG | - | chr7_4:40132503-40132522 | Msa1153410:CDS | 45.0% | |
| AGGTGGTTTATGGAGGTCTT+AGG | - | chr7_4:40132520-40132539 | Msa1153410:CDS | 45.0% | |
| GGTGGTTTATGGAGGTCTTA+GGG | - | chr7_4:40132521-40132540 | Msa1153410:CDS | 45.0% | |
| ! | CTTGCTTCTGTCGGATTTTG+GGG | - | chr7_4:40132631-40132650 | Msa1153410:intron | 45.0% |
| ! | TTGCTTCTGTCGGATTTTGG+GGG | - | chr7_4:40132632-40132651 | Msa1153410:intron | 45.0% |
| TTGGGTGTACCGTCTATATG+CGG | - | chr7_4:40132687-40132706 | Msa1153410:intron | 45.0% | |
| ! | CAATAGGTGCCGCATATAGA+CGG | + | chr7_4:40132699-40132718 | None:intergenic | 45.0% |
| !! | AAGGACTCAAGTTAGGTTGG+TGG | + | chr7_4:40133124-40133143 | None:intergenic | 45.0% |
| TGGGACTCAACATCTCATGT+TGG | - | chr7_4:40133570-40133589 | Msa1153410:intron | 45.0% | |
| TCTCATGTTGGACTCTCCAA+AGG | - | chr7_4:40133582-40133601 | Msa1153410:intron | 45.0% | |
| TCAAGTCCATCAATGGCCTT+TGG | + | chr7_4:40133601-40133620 | None:intergenic | 45.0% | |
| !!! | TTTAGTATATAATAAATTTT+TGG | - | chr7_4:40129932-40129951 | Msa1153410:intron | 5.0% |
| AATGGAGGGAGAGGAGAAGA+AGG | - | chr7_4:40129067-40129086 | Msa1153410:three_prime_UTR | 50.0% | |
| GAAGGAAAAGAAGCCGATGG+AGG | - | chr7_4:40129085-40129104 | Msa1153410:three_prime_UTR | 50.0% | |
| AAGAAGCCGATGGAGGAAGA+AGG | - | chr7_4:40129092-40129111 | Msa1153410:three_prime_UTR | 50.0% | |
| AGAAGCCGATGGAGGAAGAA+GGG | - | chr7_4:40129093-40129112 | Msa1153410:three_prime_UTR | 50.0% | |
| GGCTGAAAAGGGTTAGGGTT+TGG | + | chr7_4:40129190-40129209 | None:intergenic | 50.0% | |
| ATGGGGGTTGGGTTTGCAAT+TGG | - | chr7_4:40129291-40129310 | Msa1153410:intron | 50.0% | |
| ! | CTTTGGTTCATGCAGCTGCT+CGG | - | chr7_4:40129836-40129855 | Msa1153410:intron | 50.0% |
| ACAAAAGCCTGGCTGTGAGA+AGG | - | chr7_4:40131018-40131037 | Msa1153410:intron | 50.0% | |
| CAAAAGCCTGGCTGTGAGAA+GGG | - | chr7_4:40131019-40131038 | Msa1153410:intron | 50.0% | |
| ! | GAGAAGGGAACCGGTATTGA+CGG | - | chr7_4:40131034-40131053 | Msa1153410:intron | 50.0% |
| TTTAGTCGAGATCCGGGTTG+TGG | + | chr7_4:40132194-40132213 | None:intergenic | 50.0% | |
| CCCGGATCTCGACTAAATTG+TGG | - | chr7_4:40132197-40132216 | Msa1153410:intron | 50.0% | |
| ! | TCAACGTTTTGTCGTGGCGA+TGG | - | chr7_4:40132226-40132245 | Msa1153410:intron | 50.0% |
| TTTGTCGTGGCGATGGTCTT+TGG | - | chr7_4:40132233-40132252 | Msa1153410:intron | 50.0% | |
| !! | ACTAATGGTGTTGGTGCCCT+AGG | - | chr7_4:40132286-40132305 | Msa1153410:intron | 50.0% |
| !! | CTAATGGTGTTGGTGCCCTA+GGG | - | chr7_4:40132287-40132306 | Msa1153410:intron | 50.0% |
| GTTGTCTGGCATAAGGGAGA+GGG | - | chr7_4:40132343-40132362 | Msa1153410:intron | 50.0% | |
| TTGTCTGGCATAAGGGAGAG+GGG | - | chr7_4:40132344-40132363 | Msa1153410:intron | 50.0% | |
| GTGTCTGTATAGCTGCTGAG+GGG | - | chr7_4:40132439-40132458 | Msa1153410:intron | 50.0% | |
| !! | TCTGTCGGATTTTGGGGGTT+TGG | - | chr7_4:40132637-40132656 | Msa1153410:intron | 50.0% |
| GACTCTCCAAAGGCCATTGA+TGG | - | chr7_4:40133592-40133611 | Msa1153410:intron | 50.0% | |
| GAACGAGAGAATGGAGGGAG+AGG | - | chr7_4:40129058-40129077 | Msa1153410:three_prime_UTR | 55.0% | |
| GGGGTTGGGTTTGCAATTGG+AGG | - | chr7_4:40129294-40129313 | Msa1153410:intron | 55.0% | |
| !! | GTCTCTTGGTGCCTTAGCGA+TGG | - | chr7_4:40130313-40130332 | Msa1153410:intron | 55.0% |
| GGGGATCTTGACAGAGTTCC+AGG | - | chr7_4:40131182-40131201 | Msa1153410:intron | 55.0% | |
| GGTTGTCTGGCATAAGGGAG+AGG | - | chr7_4:40132342-40132361 | Msa1153410:intron | 55.0% | |
| TGTCTGGCATAAGGGAGAGG+GGG | - | chr7_4:40132345-40132364 | Msa1153410:intron | 55.0% | |
| TTTCTCTGCTGCTGTGACCG+TGG | - | chr7_4:40132401-40132420 | Msa1153410:intron | 55.0% | |
| !! | GTCGGATTTTGGGGGTTTGG+AGG | - | chr7_4:40132640-40132659 | Msa1153410:intron | 55.0% |
| TCCATTCCTTGCGTCTTGCG+AGG | - | chr7_4:40132732-40132751 | Msa1153410:intron | 55.0% | |
| CCATTCCTTGCGTCTTGCGA+GGG | - | chr7_4:40132733-40132752 | Msa1153410:intron | 55.0% | |
| CCTGGCTGTGAGAAGGGAAC+CGG | - | chr7_4:40131025-40131044 | Msa1153410:intron | 60.0% | |
| GTCTGGCATAAGGGAGAGGG+GGG | - | chr7_4:40132346-40132365 | Msa1153410:intron | 60.0% | |
| CCCTCGCAAGACGCAAGGAA+TGG | + | chr7_4:40132736-40132755 | None:intergenic | 60.0% | |
| TTCCTTGCGTCTTGCGAGGG+TGG | - | chr7_4:40132736-40132755 | Msa1153410:intron | 60.0% | |
| CCGGTTCCCTTCTCACAGCC+AGG | + | chr7_4:40131028-40131047 | None:intergenic | 65.0% | |
| !! | AGGGAGAGGGGGGCTGCTTT+TGG | - | chr7_4:40132356-40132375 | Msa1153410:intron | 65.0% |
| CGCCACCCTCGCAAGACGCA+AGG | + | chr7_4:40132741-40132760 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 40129039 | 40133761 | 40129039 | ID=Msa1153410;Name=Msa1153410 |
| chr7_4 | mRNA | 40129039 | 40133761 | 40129039 | ID=Msa1153410-mRNA-1;Parent=Msa1153410;Name=Msa1153410-mRNA-1;_AED=0.38;_eAED=0.55;_QI=29|0.3|0.54|1|1|1|11|92|288 |
| chr7_4 | exon | 40129039 | 40129266 | 40129039 | ID=Msa1153410-mRNA-1:exon:9693;Parent=Msa1153410-mRNA-1 |
| chr7_4 | exon | 40130241 | 40130278 | 40130241 | ID=Msa1153410-mRNA-1:exon:9692;Parent=Msa1153410-mRNA-1 |
| chr7_4 | exon | 40130373 | 40130492 | 40130373 | ID=Msa1153410-mRNA-1:exon:9691;Parent=Msa1153410-mRNA-1 |
| chr7_4 | exon | 40131456 | 40131510 | 40131456 | ID=Msa1153410-mRNA-1:exon:9690;Parent=Msa1153410-mRNA-1 |
| chr7_4 | exon | 40131593 | 40131637 | 40131593 | ID=Msa1153410-mRNA-1:exon:9689;Parent=Msa1153410-mRNA-1 |
| chr7_4 | exon | 40131723 | 40131796 | 40131723 | ID=Msa1153410-mRNA-1:exon:9688;Parent=Msa1153410-mRNA-1 |
| chr7_4 | exon | 40131898 | 40131963 | 40131898 | ID=Msa1153410-mRNA-1:exon:9687;Parent=Msa1153410-mRNA-1 |
| chr7_4 | exon | 40132466 | 40132603 | 40132466 | ID=Msa1153410-mRNA-1:exon:9686;Parent=Msa1153410-mRNA-1 |
| chr7_4 | exon | 40132742 | 40132829 | 40132742 | ID=Msa1153410-mRNA-1:exon:9685;Parent=Msa1153410-mRNA-1 |
| chr7_4 | exon | 40132943 | 40132968 | 40132943 | ID=Msa1153410-mRNA-1:exon:9684;Parent=Msa1153410-mRNA-1 |
| chr7_4 | exon | 40133652 | 40133761 | 40133652 | ID=Msa1153410-mRNA-1:exon:9683;Parent=Msa1153410-mRNA-1 |
| chr7_4 | five_prime_UTR | 40133733 | 40133761 | 40133733 | ID=Msa1153410-mRNA-1:five_prime_utr;Parent=Msa1153410-mRNA-1 |
| chr7_4 | CDS | 40133652 | 40133732 | 40133652 | ID=Msa1153410-mRNA-1:cds;Parent=Msa1153410-mRNA-1 |
| chr7_4 | CDS | 40132943 | 40132968 | 40132943 | ID=Msa1153410-mRNA-1:cds;Parent=Msa1153410-mRNA-1 |
| chr7_4 | CDS | 40132742 | 40132829 | 40132742 | ID=Msa1153410-mRNA-1:cds;Parent=Msa1153410-mRNA-1 |
| chr7_4 | CDS | 40132466 | 40132603 | 40132466 | ID=Msa1153410-mRNA-1:cds;Parent=Msa1153410-mRNA-1 |
| chr7_4 | CDS | 40131898 | 40131963 | 40131898 | ID=Msa1153410-mRNA-1:cds;Parent=Msa1153410-mRNA-1 |
| chr7_4 | CDS | 40131723 | 40131796 | 40131723 | ID=Msa1153410-mRNA-1:cds;Parent=Msa1153410-mRNA-1 |
| chr7_4 | CDS | 40131593 | 40131637 | 40131593 | ID=Msa1153410-mRNA-1:cds;Parent=Msa1153410-mRNA-1 |
| chr7_4 | CDS | 40131456 | 40131510 | 40131456 | ID=Msa1153410-mRNA-1:cds;Parent=Msa1153410-mRNA-1 |
| chr7_4 | CDS | 40130373 | 40130492 | 40130373 | ID=Msa1153410-mRNA-1:cds;Parent=Msa1153410-mRNA-1 |
| chr7_4 | CDS | 40130241 | 40130278 | 40130241 | ID=Msa1153410-mRNA-1:cds;Parent=Msa1153410-mRNA-1 |
| chr7_4 | CDS | 40129131 | 40129266 | 40129131 | ID=Msa1153410-mRNA-1:cds;Parent=Msa1153410-mRNA-1 |
| chr7_4 | three_prime_UTR | 40129039 | 40129130 | 40129039 | ID=Msa1153410-mRNA-1:three_prime_utr;Parent=Msa1153410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
