AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0258760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0258760 MtrunA17_Chr2g0321461 98.462 390 4 2 1 389 1 389 0.0 783
Msa0258760 MtrunA17_Chr6g0461641 49.751 402 112 14 38 389 35 396 7.92e-105 315
Msa0258760 MtrunA17_Chr5g0417521 52.941 204 87 1 38 241 8 202 4.08e-67 216
Msa0258760 MtrunA17_Chr4g0042451 53.623 207 82 4 38 241 10 205 3.63e-63 206
Msa0258760 MtrunA17_Chr5g0409731 50.802 187 81 4 38 224 18 193 1.39e-51 174
Msa0258760 MtrunA17_Chr8g0356501 52.632 171 63 3 35 205 27 179 3.34e-50 172
Msa0258760 MtrunA17_Chr2g0310011 57.051 156 47 5 35 189 25 161 4.06e-47 164
Msa0258760 MtrunA17_Chr7g0254981 44.670 197 86 5 44 237 49 225 1.10e-42 150
Msa0258760 MtrunA17_Chr2g0290991 40.079 252 123 9 27 261 19 259 8.68e-41 146
Msa0258760 MtrunA17_Chr2g0291021 46.023 176 72 3 27 200 31 185 1.90e-40 146
Msa0258760 MtrunA17_Chr7g0261911 45.251 179 72 4 21 194 233 390 2.35e-39 146
Msa0258760 MtrunA17_Chr1g0175091 43.850 187 73 5 27 204 236 399 7.86e-38 141
Msa0258760 MtrunA17_Chr1g0197171 39.048 210 115 4 12 221 11 207 1.87e-37 137
Msa0258760 MtrunA17_Chr1g0190301 43.293 164 72 2 31 194 161 303 1.24e-36 137
Msa0258760 MtrunA17_Chr7g0258551 43.871 155 65 3 44 198 211 343 1.23e-34 131
Msa0258760 MtrunA17_Chr7g0274471 43.590 156 66 3 45 200 218 351 5.09e-34 131
Msa0258760 MtrunA17_Chr7g0242521 44.000 150 59 5 45 191 13 140 1.88e-28 111
Msa0258760 MtrunA17_Chr1g0175071 38.372 172 84 6 33 204 165 314 3.18e-25 104
Msa0258760 MtrunA17_Chr1g0175081 52.381 63 30 0 41 103 18 80 1.03e-19 83.6
Msa0258760 MtrunA17_Chr7g0243081 62.500 56 21 0 46 101 72 127 2.18e-18 85.5
Msa0258760 MtrunA17_Chr2g0288601 64.000 50 18 0 46 95 72 121 5.97e-17 76.6
Msa0258760 MtrunA17_Chr2g0320231 52.778 72 32 1 30 101 84 153 1.05e-16 80.9
Msa0258760 MtrunA17_Chr8g0379121 58.929 56 23 0 46 101 112 167 2.49e-16 80.1
Msa0258760 MtrunA17_Chr3g0095611 50.794 63 28 1 45 107 19 78 3.56e-16 76.6
Msa0258760 MtrunA17_Chr1g0210911 62.264 53 20 0 46 98 23 75 4.22e-16 78.6
Msa0258760 MtrunA17_Chr1g0162931 60.377 53 21 0 46 98 19 71 6.21e-16 77.4
Msa0258760 MtrunA17_Chr6g0479431 53.125 64 30 0 46 109 203 266 1.23e-15 77.8
Msa0258760 MtrunA17_Chr4g0009901 52.174 69 31 2 32 99 154 221 1.37e-15 76.3
Msa0258760 MtrunA17_Chr5g0410741 58.929 56 23 0 46 101 220 275 5.08e-15 76.3
Msa0258760 MtrunA17_Chr3g0109981 52.308 65 31 0 46 110 275 339 7.40e-15 75.9
Msa0258760 MtrunA17_Chr4g0009981 59.259 54 21 1 45 98 116 168 1.20e-14 73.6
Msa0258760 MtrunA17_Chr1g0154261 44.318 88 42 2 46 126 127 214 1.86e-14 73.6
Msa0258760 MtrunA17_Chr8g0366281 57.143 56 24 0 46 101 174 229 4.26e-14 72.8
Msa0258760 MtrunA17_Chr2g0294911 55.932 59 25 1 41 99 207 264 4.26e-14 73.9
Msa0258760 MtrunA17_Chr2g0304841 54.237 59 26 1 41 99 209 266 9.52e-14 72.8
Msa0258760 MtrunA17_Chr2g0283951 58.000 50 21 0 46 95 90 139 1.27e-13 71.6
Msa0258760 MtrunA17_Chr4g0067981 55.932 59 25 1 41 99 211 268 1.33e-13 72.4
Msa0258760 MtrunA17_Chr7g0258531 33.333 147 76 3 44 189 212 337 2.06e-13 70.9
Msa0258760 MtrunA17_Chr1g0161431 52.542 59 27 1 41 99 196 253 2.71e-13 71.2
Msa0258760 MtrunA17_Chr4g0009851 55.556 54 23 1 45 98 169 221 3.35e-13 69.7
Msa0258760 MtrunA17_Chr4g0031961 43.333 90 49 2 42 130 128 216 5.79e-13 69.3
Msa0258760 MtrunA17_Chr7g0255711 58.182 55 22 1 45 99 91 144 8.16e-13 68.6
Msa0258760 MtrunA17_Chr1g0198601 56.364 55 24 0 45 99 211 265 1.21e-12 68.6
Msa0258760 MtrunA17_Chr4g0062921 55.172 58 26 0 42 99 232 289 1.24e-12 68.9
Msa0258760 MtrunA17_Chr7g0275401 57.407 54 22 1 45 98 192 244 2.94e-12 67.0
Msa0258760 MtrunA17_Chr1g0149841 56.364 55 23 1 45 99 191 244 4.44e-12 67.4
Msa0258760 MtrunA17_Chr4g0045361 53.448 58 27 0 42 99 271 328 5.00e-12 67.0
Msa0258760 MtrunA17_Chr4g0009991 54.902 51 22 1 45 95 67 116 5.58e-12 62.8
Msa0258760 MtrunA17_Chr4g0040481 53.704 54 24 1 45 98 158 210 1.02e-11 66.2
Msa0258760 MtrunA17_Chr5g0402631 44.737 76 42 0 45 120 214 289 1.22e-11 65.5
Msa0258760 MtrunA17_Chr8g0376881 46.667 75 33 2 45 113 209 282 1.26e-11 66.2
Msa0258760 MtrunA17_Chr4g0074401 53.333 60 27 1 41 100 199 257 1.51e-11 65.9
Msa0258760 MtrunA17_Chr2g0324891 53.846 52 23 1 47 98 163 213 1.66e-11 65.5
Msa0258760 MtrunA17_Chr5g0422621 36.364 110 61 2 13 122 171 271 2.15e-11 64.7
Msa0258760 MtrunA17_Chr4g0074411 53.333 60 27 1 41 100 197 255 4.39e-11 64.7
Msa0258760 MtrunA17_Chr3g0137101 49.153 59 29 1 41 99 194 251 4.54e-11 64.7
Msa0258760 MtrunA17_Chr3g0123131 49.153 59 29 1 41 99 195 252 5.37e-11 64.3
Msa0258760 MtrunA17_Chr6g0471041 37.634 93 50 3 15 100 135 226 7.81e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0258760 AT3G04030.3 54.745 411 144 12 2 389 3 394 3.01e-130 380
Msa0258760 AT3G04030.2 54.258 411 145 13 2 389 3 393 5.10e-127 371
Msa0258760 AT5G18240.1 53.571 420 143 15 2 389 3 402 1.52e-126 370
Msa0258760 AT5G18240.4 53.571 420 143 15 2 389 3 402 1.52e-126 370
Msa0258760 AT5G18240.5 53.095 420 143 16 2 389 3 400 3.45e-123 362
Msa0258760 AT3G04030.1 53.285 411 144 13 2 389 3 388 5.74e-123 361
Msa0258760 AT5G18240.2 52.143 420 143 16 2 389 3 396 1.90e-119 352
Msa0258760 AT5G18240.3 52.143 420 143 16 2 389 3 396 1.90e-119 352
Msa0258760 AT3G04030.5 49.107 336 130 11 77 389 1 318 4.04e-83 256
Msa0258760 AT3G04030.4 47.321 336 130 12 77 389 1 312 5.75e-76 238
Msa0258760 AT5G18240.6 46.377 345 128 15 77 389 1 320 1.14e-71 227
Msa0258760 AT1G69580.2 53.333 210 91 2 31 238 20 224 9.03e-65 210
Msa0258760 AT1G69580.1 53.110 209 92 2 31 238 20 223 3.46e-64 208
Msa0258760 AT4G13640.1 44.643 280 130 7 11 274 1 271 1.01e-61 201
Msa0258760 AT3G24120.1 49.528 212 86 2 19 224 15 211 4.99e-60 196
Msa0258760 AT4G13640.2 44.170 283 130 8 11 274 1 274 1.13e-59 196
Msa0258760 AT3G24120.2 48.837 215 86 3 19 224 15 214 6.41e-58 191
Msa0258760 AT1G79430.2 54.706 170 59 3 35 204 24 175 2.43e-52 178
Msa0258760 AT5G45580.2 44.949 198 86 3 30 219 8 190 3.16e-47 162
Msa0258760 AT3G12730.1 50.595 168 64 4 34 198 12 163 6.57e-46 158
Msa0258760 AT5G45580.1 45.503 189 80 3 39 219 1 174 1.75e-45 157
Msa0258760 AT2G01060.1 47.024 168 66 4 44 208 14 161 5.03e-41 146
Msa0258760 AT5G29000.1 44.805 154 67 2 44 197 187 322 1.16e-36 137
Msa0258760 AT5G29000.3 44.805 154 67 2 44 197 187 322 1.16e-36 137
Msa0258760 AT5G29000.2 44.805 154 67 2 44 197 230 365 2.40e-36 137
Msa0258760 AT3G04450.4 44.586 157 69 2 41 197 194 332 6.63e-36 135
Msa0258760 AT3G04450.2 44.586 157 69 2 41 197 194 332 6.63e-36 135
Msa0258760 AT3G04450.1 44.586 157 69 2 41 197 234 372 1.08e-35 136
Msa0258760 AT4G28610.1 38.462 208 105 5 44 251 224 408 1.13e-35 135
Msa0258760 AT5G06800.2 45.455 154 65 2 45 197 192 327 9.99e-35 132
Msa0258760 AT3G13040.3 44.654 159 67 3 45 201 241 380 9.79e-34 130
Msa0258760 AT3G13040.1 44.654 159 67 3 45 201 241 380 9.79e-34 130
Msa0258760 AT3G13040.2 44.654 159 67 3 45 201 241 380 9.79e-34 130
Msa0258760 AT5G06800.1 44.444 153 63 2 45 197 192 322 3.26e-33 128
Msa0258760 AT2G20400.1 40.854 164 69 3 47 210 233 368 1.23e-30 121
Msa0258760 AT2G20400.2 40.854 164 70 4 47 210 233 369 1.58e-30 121
Msa0258760 AT1G79430.1 48.438 128 48 3 77 204 1 110 2.75e-26 107
Msa0258760 AT2G01060.2 43.939 132 51 4 80 208 1 112 1.82e-23 98.2
Msa0258760 AT3G12730.2 44.800 125 50 4 77 198 1 109 1.22e-21 91.7
Msa0258760 AT5G29000.4 57.746 71 28 1 44 114 230 298 5.36e-21 92.8
Msa0258760 AT3G04450.3 60.656 61 24 0 41 101 234 294 5.66e-21 92.8
Msa0258760 AT5G06800.3 61.017 59 23 0 45 103 192 250 1.14e-19 88.6
Msa0258760 AT2G06020.1 48.193 83 39 2 27 105 65 147 3.02e-18 85.1
Msa0258760 AT2G38300.1 55.072 69 30 1 46 114 55 122 7.11e-18 84.3
Msa0258760 AT2G42660.1 58.065 62 25 1 46 107 51 111 1.61e-17 82.0
Msa0258760 AT1G14600.1 60.714 56 22 0 46 101 24 79 6.62e-17 80.1
Msa0258760 AT4G04605.1 60.377 53 21 0 46 98 15 67 1.31e-16 78.6
Msa0258760 AT2G40260.1 58.929 56 23 0 46 101 83 138 1.41e-16 81.3
Msa0258760 AT2G02060.2 62.264 53 20 0 46 98 30 82 2.54e-16 78.6
Msa0258760 AT2G02060.1 62.264 53 20 0 46 98 30 82 2.54e-16 78.6
Msa0258760 AT5G42630.2 55.072 69 30 1 33 101 94 161 1.30e-15 75.9
Msa0258760 AT5G16560.1 53.125 64 30 0 46 109 220 283 1.81e-15 77.8
Msa0258760 AT4G04580.1 54.717 53 24 0 46 98 15 67 2.14e-15 73.9
Msa0258760 AT1G32240.2 53.125 64 30 0 46 109 214 277 3.06e-15 77.0
Msa0258760 AT5G42630.1 55.072 69 30 1 33 101 94 161 3.40e-15 75.5
Msa0258760 AT1G32240.1 53.125 64 30 0 46 109 214 277 3.70e-15 77.0
Msa0258760 AT4G17695.1 51.562 64 31 0 46 109 165 228 1.08e-14 74.7
Msa0258760 AT5G05090.1 58.182 55 22 1 45 99 81 134 3.40e-13 69.7
Msa0258760 AT5G59570.2 55.172 58 25 1 42 99 138 194 3.72e-13 70.1
Msa0258760 AT5G59570.1 55.172 58 25 1 42 99 138 194 3.72e-13 70.1
Msa0258760 AT2G40970.1 56.897 58 24 1 42 99 102 158 4.22e-13 68.9
Msa0258760 AT5G45580.3 34.074 135 66 3 93 219 16 135 5.22e-13 68.6
Msa0258760 AT3G10760.1 50.000 70 34 1 30 99 90 158 5.84e-13 69.7
Msa0258760 AT3G16857.3 54.545 55 24 1 45 99 167 220 6.58e-13 70.5
Msa0258760 AT3G16857.1 54.545 55 24 1 45 99 237 290 7.14e-13 70.5
Msa0258760 AT3G16857.2 54.545 55 24 1 45 99 237 290 7.73e-13 70.5
Msa0258760 AT3G46640.3 56.364 55 23 1 45 99 144 197 1.02e-12 68.9
Msa0258760 AT3G46640.2 56.364 55 23 1 45 99 144 197 1.07e-12 68.9
Msa0258760 AT3G46640.1 56.364 55 23 1 45 99 144 197 1.07e-12 68.9
Msa0258760 AT2G03500.1 56.364 55 24 0 45 99 233 287 1.53e-12 68.9
Msa0258760 AT2G01760.3 49.231 65 31 2 45 108 135 198 3.12e-12 67.4
Msa0258760 AT5G58080.1 51.471 68 32 1 32 99 181 247 5.02e-12 67.8
Msa0258760 AT2G01760.1 49.231 65 31 2 45 108 200 263 5.08e-12 67.4
Msa0258760 AT1G25550.1 56.364 55 24 0 45 99 209 263 5.19e-12 67.0
Msa0258760 AT2G01760.2 49.231 65 31 2 45 108 228 291 7.45e-12 67.0
Msa0258760 AT2G20570.1 55.769 52 22 1 47 98 155 205 2.52e-11 65.5
Msa0258760 AT2G20570.2 55.769 52 22 1 47 98 171 221 2.85e-11 65.1
Msa0258760 AT1G49560.1 39.583 96 55 1 45 137 192 287 3.31e-11 64.3
Msa0258760 AT5G44190.1 50.000 54 26 1 45 98 147 199 3.91e-11 64.7
Msa0258760 AT3G25790.1 38.202 89 55 0 50 138 201 289 4.18e-11 64.3
Msa0258760 AT5G44190.2 50.000 54 26 1 45 98 147 199 4.99e-11 63.9
Msa0258760 AT3G62670.1 48.438 64 29 1 41 100 207 270 6.34e-11 63.9

Find 68 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATTCAAAATGGAGGGTT+TGG 0.270343 2_2:-55376456 Msa0258760:CDS
GCATGAACTTAATTTGAATT+AGG 0.280533 2_2:+55375958 None:intergenic
ACACTTGGTAGACAGAATTT+AGG 0.292229 2_2:-55376663 Msa0258760:CDS
ATGCAAAACCTAGATTAAAA+TGG 0.295286 2_2:-55377725 Msa0258760:CDS
AAAACAATGAAGTACTAAAA+TGG 0.316678 2_2:-55376341 Msa0258760:CDS
GGAAATGGTTCTAGTGATTC+AGG 0.325156 2_2:-55377765 Msa0258760:CDS
GTTGAGAATCATTCAGATAT+TGG 0.332253 2_2:-55376219 Msa0258760:CDS
GAACAAGAAATCATTCAAAA+TGG 0.339387 2_2:-55376465 Msa0258760:CDS
TAAAATTGTATCAATATTAC+TGG 0.341250 2_2:+55375986 None:intergenic
AGCTATCTCCTTCATAATAA+TGG 0.346698 2_2:+55376009 None:intergenic
AAATAACAACCATGTGTTCA+TGG 0.356068 2_2:-55376415 Msa0258760:CDS
ATGACTCTTTAAATGATATA+AGG 0.363326 2_2:+55377481 None:intergenic
TAGAACCATTTCCTGTTTGA+AGG 0.369263 2_2:+55377775 None:intergenic
GTAAACAACTTGATTTGAAT+AGG 0.370306 2_2:-55376122 Msa0258760:CDS
ATGAAACTCATGGGAATTCC+AGG 0.370323 2_2:-55377509 Msa0258760:CDS
TCTACTTTCACCATTCATAT+AGG 0.371825 2_2:-55377875 Msa0258760:five_prime_UTR
ACAAAGGAACACTGCAAGAT+TGG 0.379529 2_2:-55376187 Msa0258760:CDS
AGACAGAATTTAGGAATAGT+AGG 0.380211 2_2:-55376654 Msa0258760:CDS
TCATTTAAAGAGTCATCTTC+AGG 0.380557 2_2:-55377474 Msa0258760:intron
ATGTTCCTTCAAACAGGAAA+TGG 0.408546 2_2:-55377780 Msa0258760:CDS
TTTATTCATGTGAGTTCCAT+TGG 0.431480 2_2:+55377179 None:intergenic
CTTTCTCAAGCACTGATTGA+AGG 0.431720 2_2:+55376694 None:intergenic
GTAATCAACCATTATTATGA+AGG 0.434551 2_2:-55376017 Msa0258760:three_prime_UTR
AATGCTTGTTGAGCTTGTCT+TGG 0.435876 2_2:+55377957 None:intergenic
TTGATTTGAATAGGTTCAGT+TGG 0.449179 2_2:-55376113 Msa0258760:CDS
ATAAACCTTGCATGAAGATC+AGG 0.452639 2_2:+55377699 None:intergenic
CTGTCCATCGAGCCGTCGTT+TGG 0.455742 2_2:+55376522 None:intergenic
CTTTCCTTTCCATGAACACA+TGG 0.455778 2_2:+55376406 None:intergenic
ATCGAGCCGTCGTTTGGTTG+AGG 0.465457 2_2:+55376528 None:intergenic
AGGCACATGTTCCTTCAAAC+AGG 0.475299 2_2:-55377786 Msa0258760:CDS
AATGAATTAGAAAGAAATCA+TGG 0.479388 2_2:-55376264 Msa0258760:CDS
TACAAAGACACTTGCAGCTA+AGG 0.482388 2_2:-55376737 Msa0258760:CDS
GGAAATTTGTCTATGAACAT+TGG 0.485289 2_2:-55376243 Msa0258760:CDS
ATAGAAGCAGTTAATCAGTT+AGG 0.490373 2_2:-55377678 Msa0258760:CDS
CACATGAATAAATTAACACT+TGG 0.490644 2_2:-55377168 Msa0258760:CDS
ATCGTCTGACCGATCACAAA+AGG 0.496813 2_2:-55376487 Msa0258760:CDS
CTATCGATATCATGCATGCT+TGG 0.520649 2_2:-55375936 Msa0258760:three_prime_UTR
GACAGAATTTAGGAATAGTA+GGG 0.543038 2_2:-55376653 Msa0258760:CDS
CAAGAAATCATTCAAAATGG+AGG 0.547960 2_2:-55376462 Msa0258760:CDS
AAATGATATAAGGTAAGCCC+TGG 0.549274 2_2:+55377491 None:intergenic
AAGAAATCATTCAAAATGGA+GGG 0.551325 2_2:-55376461 Msa0258760:CDS
TCAGAGATGAAGGAGTTACA+AGG 0.555449 2_2:-55376558 Msa0258760:CDS
CAACAAGCAACTGAATTAGC+AGG 0.559201 2_2:-55376381 Msa0258760:CDS
GGCGCTGCAAATGCAGATTG+AGG 0.562019 2_2:-55376994 Msa0258760:CDS
GATGATACATCCTATATGAA+TGG 0.567700 2_2:+55377865 None:intergenic
TCAACCAAACGACGGCTCGA+TGG 0.568429 2_2:-55376526 Msa0258760:CDS
AATTCATTATTATTTCCTAA+CGG 0.568566 2_2:+55376279 None:intergenic
TTGATAGTATCAAATATAAG+AGG 0.572495 2_2:+55377927 None:intergenic
ACAACCATGTGTTCATGGAA+AGG 0.581829 2_2:-55376410 Msa0258760:CDS
GAGAGACTTTCTGAAACCAA+TGG 0.583065 2_2:-55377195 Msa0258760:CDS
TTGTTGTTGTTATTAGTCTG+TGG 0.584414 2_2:+55377144 None:intergenic
AAAACAGTAATGAAACTCAT+GGG 0.594613 2_2:-55377518 Msa0258760:CDS
AGGAACATGTGCCTCTCAGA+TGG 0.596232 2_2:+55377795 None:intergenic
AAGACTCAATGAACAACTTG+AGG 0.597565 2_2:-55376964 Msa0258760:intron
AGATTAAGCAAGAATCTGCA+TGG 0.602970 2_2:-55377368 Msa0258760:CDS
GAGAAAGCTCAAGAAACACT+TGG 0.604326 2_2:-55376678 Msa0258760:CDS
CAGCTAAGGATAGAAGCTCA+AGG 0.609742 2_2:-55376723 Msa0258760:CDS
AGTCGTGGAGATAACAATGA+AGG 0.610907 2_2:-55376156 Msa0258760:CDS
GGACACCTGATCTTCATGCA+AGG 0.639163 2_2:-55377704 Msa0258760:CDS
GAAGCAGTTAATCAGTTAGG+CGG 0.649355 2_2:-55377675 Msa0258760:CDS
AGATTGGATCTAAACAGTCG+TGG 0.649789 2_2:-55376171 Msa0258760:CDS
TGAAACTCATGGGAATTCCA+GGG 0.657200 2_2:-55377508 Msa0258760:CDS
TGTTGAATTCAGACACTGTG+AGG 0.662262 2_2:+55376584 None:intergenic
TAGAGATTTACACATAAGCG+AGG 0.677842 2_2:-55377015 Msa0258760:CDS
AGTTAATCAGTTAGGCGGAG+CGG 0.682383 2_2:-55377670 Msa0258760:CDS
AGTACTAAAATGGTGTGTTG+AGG 0.684708 2_2:-55376331 Msa0258760:CDS
GAATGTCAATACCATCTGAG+AGG 0.692919 2_2:-55377806 Msa0258760:CDS
ATATTGGTGAGTTTCAACAA+AGG 0.741956 2_2:-55376203 Msa0258760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTCATTATTATTTCCTAA+CGG + chr2_2:55377610-55377629 None:intergenic 15.0%
!! TAAAATTGTATCAATATTAC+TGG + chr2_2:55377903-55377922 None:intergenic 15.0%
!! AATTCATTATTATTTCCTAA+CGG + chr2_2:55377610-55377629 None:intergenic 15.0%
!! TAAAATTGTATCAATATTAC+TGG + chr2_2:55377903-55377922 None:intergenic 15.0%
!!! TTGATAGTATCAAATATAAG+AGG + chr2_2:55375962-55375981 None:intergenic 20.0%
!! ATGACTCTTTAAATGATATA+AGG + chr2_2:55376408-55376427 None:intergenic 20.0%
!!! TTTTTTTACCATACTTTGTA+TGG - chr2_2:55376453-55376472 Msa0258760:CDS 20.0%
!!! TGAAGAGTGTAATTAAAAAA+GGG + chr2_2:55376783-55376802 None:intergenic 20.0%
!!! ATGAAGAGTGTAATTAAAAA+AGG + chr2_2:55376784-55376803 None:intergenic 20.0%
!!! TTAGTACTTCATTGTTTTTA+AGG + chr2_2:55377543-55377562 None:intergenic 20.0%
!!! AAAACAATGAAGTACTAAAA+TGG - chr2_2:55377545-55377564 Msa0258760:intron 20.0%
!! AATGAATTAGAAAGAAATCA+TGG - chr2_2:55377622-55377641 Msa0258760:intron 20.0%
!!! TTGATAGTATCAAATATAAG+AGG + chr2_2:55375962-55375981 None:intergenic 20.0%
!! ATGACTCTTTAAATGATATA+AGG + chr2_2:55376408-55376427 None:intergenic 20.0%
!!! TTTTTTTACCATACTTTGTA+TGG - chr2_2:55376453-55376472 Msa0258760:CDS 20.0%
!!! TGAAGAGTGTAATTAAAAAA+GGG + chr2_2:55376783-55376802 None:intergenic 20.0%
!!! ATGAAGAGTGTAATTAAAAA+AGG + chr2_2:55376784-55376803 None:intergenic 20.0%
!!! TTAGTACTTCATTGTTTTTA+AGG + chr2_2:55377543-55377562 None:intergenic 20.0%
!!! AAAACAATGAAGTACTAAAA+TGG - chr2_2:55377545-55377564 Msa0258760:intron 20.0%
!! AATGAATTAGAAAGAAATCA+TGG - chr2_2:55377622-55377641 Msa0258760:intron 20.0%
!!! CTTGTTTTGAAGTATTTTTG+TGG + chr2_2:55375985-55376004 None:intergenic 25.0%
! CACAAAAATACTTCAAAACA+AGG - chr2_2:55375983-55376002 Msa0258760:three_prime_UTR 25.0%
! ATGCAAAACCTAGATTAAAA+TGG - chr2_2:55376161-55376180 Msa0258760:CDS 25.0%
!! ATTACAAACTCATTCTCTTT+TGG - chr2_2:55376258-55376277 Msa0258760:CDS 25.0%
!! ATGAGTTTCATTACTGTTTT+TGG + chr2_2:55376368-55376387 None:intergenic 25.0%
! AAAAACAGTAATGAAACTCA+TGG - chr2_2:55376367-55376386 Msa0258760:CDS 25.0%
! AAAACAGTAATGAAACTCAT+GGG - chr2_2:55376368-55376387 Msa0258760:CDS 25.0%
! CACATGAATAAATTAACACT+TGG - chr2_2:55376718-55376737 Msa0258760:CDS 25.0%
! TGTGTAAATCTCTATCAAAA+GGG + chr2_2:55376865-55376884 None:intergenic 25.0%
! ATGTGTAAATCTCTATCAAA+AGG + chr2_2:55376866-55376885 None:intergenic 25.0%
! GAACAAGAAATCATTCAAAA+TGG - chr2_2:55377421-55377440 Msa0258760:intron 25.0%
! AAGAAATCATTCAAAATGGA+GGG - chr2_2:55377425-55377444 Msa0258760:intron 25.0%
!! GTAAACAACTTGATTTGAAT+AGG - chr2_2:55377764-55377783 Msa0258760:CDS 25.0%
! GTAATCAACCATTATTATGA+AGG - chr2_2:55377869-55377888 Msa0258760:exon 25.0%
!! GCATGAACTTAATTTGAATT+AGG + chr2_2:55377931-55377950 None:intergenic 25.0%
!!! CTTGTTTTGAAGTATTTTTG+TGG + chr2_2:55375985-55376004 None:intergenic 25.0%
! CACAAAAATACTTCAAAACA+AGG - chr2_2:55375983-55376002 Msa0258760:three_prime_UTR 25.0%
! ATGCAAAACCTAGATTAAAA+TGG - chr2_2:55376161-55376180 Msa0258760:CDS 25.0%
!! ATTACAAACTCATTCTCTTT+TGG - chr2_2:55376258-55376277 Msa0258760:CDS 25.0%
!! ATGAGTTTCATTACTGTTTT+TGG + chr2_2:55376368-55376387 None:intergenic 25.0%
! AAAAACAGTAATGAAACTCA+TGG - chr2_2:55376367-55376386 Msa0258760:CDS 25.0%
! AAAACAGTAATGAAACTCAT+GGG - chr2_2:55376368-55376387 Msa0258760:CDS 25.0%
! CACATGAATAAATTAACACT+TGG - chr2_2:55376718-55376737 Msa0258760:CDS 25.0%
! TGTGTAAATCTCTATCAAAA+GGG + chr2_2:55376865-55376884 None:intergenic 25.0%
! ATGTGTAAATCTCTATCAAA+AGG + chr2_2:55376866-55376885 None:intergenic 25.0%
! GAACAAGAAATCATTCAAAA+TGG - chr2_2:55377421-55377440 Msa0258760:intron 25.0%
! AAGAAATCATTCAAAATGGA+GGG - chr2_2:55377425-55377444 Msa0258760:intron 25.0%
!! GTAAACAACTTGATTTGAAT+AGG - chr2_2:55377764-55377783 Msa0258760:CDS 25.0%
! GTAATCAACCATTATTATGA+AGG - chr2_2:55377869-55377888 Msa0258760:exon 25.0%
!! GCATGAACTTAATTTGAATT+AGG + chr2_2:55377931-55377950 None:intergenic 25.0%
TCTACTTTCACCATTCATAT+AGG - chr2_2:55376011-55376030 Msa0258760:three_prime_UTR 30.0%
GATGATACATCCTATATGAA+TGG + chr2_2:55376024-55376043 None:intergenic 30.0%
ATGTATCATCATCATCATCA+AGG - chr2_2:55376034-55376053 Msa0258760:three_prime_UTR 30.0%
ATAGAAGCAGTTAATCAGTT+AGG - chr2_2:55376208-55376227 Msa0258760:CDS 30.0%
!! AAACTCATTCTCTTTTGGTT+TGG - chr2_2:55376263-55376282 Msa0258760:CDS 30.0%
TCATTTAAAGAGTCATCTTC+AGG - chr2_2:55376412-55376431 Msa0258760:CDS 30.0%
TAATTGCACCATACAAAGTA+TGG + chr2_2:55376464-55376483 None:intergenic 30.0%
TTTATTCATGTGAGTTCCAT+TGG + chr2_2:55376710-55376729 None:intergenic 30.0%
! TTGTTGTTGTTATTAGTCTG+TGG + chr2_2:55376745-55376764 None:intergenic 30.0%
GTATAAAATCTTAGAGTGGT+AGG + chr2_2:55376830-55376849 None:intergenic 30.0%
GTCAGTATAAAATCTTAGAG+TGG + chr2_2:55376834-55376853 None:intergenic 30.0%
AGAAACAAAATTAACGCGTT+TGG + chr2_2:55377091-55377110 None:intergenic 30.0%
AAACCAATATTCAAAACCTG+TGG - chr2_2:55377122-55377141 Msa0258760:intron 30.0%
AGACAGAATTTAGGAATAGT+AGG - chr2_2:55377232-55377251 Msa0258760:intron 30.0%
GACAGAATTTAGGAATAGTA+GGG - chr2_2:55377233-55377252 Msa0258760:intron 30.0%
! TTCAACATTTTCAGAGATGA+AGG - chr2_2:55377318-55377337 Msa0258760:intron 30.0%
! TTTCTTGTTCCTTTTGTGAT+CGG + chr2_2:55377411-55377430 None:intergenic 30.0%
CAAGAAATCATTCAAAATGG+AGG - chr2_2:55377424-55377443 Msa0258760:intron 30.0%
AAATAACAACCATGTGTTCA+TGG - chr2_2:55377471-55377490 Msa0258760:intron 30.0%
GGAAATTTGTCTATGAACAT+TGG - chr2_2:55377643-55377662 Msa0258760:intron 30.0%
GTTGAGAATCATTCAGATAT+TGG - chr2_2:55377667-55377686 Msa0258760:CDS 30.0%
ATATTGGTGAGTTTCAACAA+AGG - chr2_2:55377683-55377702 Msa0258760:CDS 30.0%
! TTGATTTGAATAGGTTCAGT+TGG - chr2_2:55377773-55377792 Msa0258760:CDS 30.0%
!! GAGAGTCAATTTTAGCAAAA+TGG - chr2_2:55377807-55377826 Msa0258760:CDS 30.0%
AGCTATCTCCTTCATAATAA+TGG + chr2_2:55377880-55377899 None:intergenic 30.0%
TCTACTTTCACCATTCATAT+AGG - chr2_2:55376011-55376030 Msa0258760:three_prime_UTR 30.0%
GATGATACATCCTATATGAA+TGG + chr2_2:55376024-55376043 None:intergenic 30.0%
ATGTATCATCATCATCATCA+AGG - chr2_2:55376034-55376053 Msa0258760:three_prime_UTR 30.0%
ATAGAAGCAGTTAATCAGTT+AGG - chr2_2:55376208-55376227 Msa0258760:CDS 30.0%
!! AAACTCATTCTCTTTTGGTT+TGG - chr2_2:55376263-55376282 Msa0258760:CDS 30.0%
TCATTTAAAGAGTCATCTTC+AGG - chr2_2:55376412-55376431 Msa0258760:CDS 30.0%
TAATTGCACCATACAAAGTA+TGG + chr2_2:55376464-55376483 None:intergenic 30.0%
TTTATTCATGTGAGTTCCAT+TGG + chr2_2:55376710-55376729 None:intergenic 30.0%
! TTGTTGTTGTTATTAGTCTG+TGG + chr2_2:55376745-55376764 None:intergenic 30.0%
GTATAAAATCTTAGAGTGGT+AGG + chr2_2:55376830-55376849 None:intergenic 30.0%
GTCAGTATAAAATCTTAGAG+TGG + chr2_2:55376834-55376853 None:intergenic 30.0%
AGAAACAAAATTAACGCGTT+TGG + chr2_2:55377091-55377110 None:intergenic 30.0%
AAACCAATATTCAAAACCTG+TGG - chr2_2:55377122-55377141 Msa0258760:intron 30.0%
AGACAGAATTTAGGAATAGT+AGG - chr2_2:55377232-55377251 Msa0258760:intron 30.0%
GACAGAATTTAGGAATAGTA+GGG - chr2_2:55377233-55377252 Msa0258760:intron 30.0%
! TTCAACATTTTCAGAGATGA+AGG - chr2_2:55377318-55377337 Msa0258760:intron 30.0%
! TTTCTTGTTCCTTTTGTGAT+CGG + chr2_2:55377411-55377430 None:intergenic 30.0%
CAAGAAATCATTCAAAATGG+AGG - chr2_2:55377424-55377443 Msa0258760:intron 30.0%
AAATAACAACCATGTGTTCA+TGG - chr2_2:55377471-55377490 Msa0258760:intron 30.0%
GGAAATTTGTCTATGAACAT+TGG - chr2_2:55377643-55377662 Msa0258760:intron 30.0%
GTTGAGAATCATTCAGATAT+TGG - chr2_2:55377667-55377686 Msa0258760:CDS 30.0%
ATATTGGTGAGTTTCAACAA+AGG - chr2_2:55377683-55377702 Msa0258760:CDS 30.0%
! TTGATTTGAATAGGTTCAGT+TGG - chr2_2:55377773-55377792 Msa0258760:CDS 30.0%
!! GAGAGTCAATTTTAGCAAAA+TGG - chr2_2:55377807-55377826 Msa0258760:CDS 30.0%
AGCTATCTCCTTCATAATAA+TGG + chr2_2:55377880-55377899 None:intergenic 30.0%
ATGTTCCTTCAAACAGGAAA+TGG - chr2_2:55376106-55376125 Msa0258760:exon 35.0%
TAGAACCATTTCCTGTTTGA+AGG + chr2_2:55376114-55376133 None:intergenic 35.0%
!! TCAGGTGTCCATTTTAATCT+AGG + chr2_2:55376172-55376191 None:intergenic 35.0%
ATAAACCTTGCATGAAGATC+AGG + chr2_2:55376190-55376209 None:intergenic 35.0%
TTGCTTCTGCAATAGAAAGA+TGG + chr2_2:55376343-55376362 None:intergenic 35.0%
AAATGATATAAGGTAAGCCC+TGG + chr2_2:55376398-55376417 None:intergenic 35.0%
TCTTGCTTAATCTGTACTTC+TGG + chr2_2:55376511-55376530 None:intergenic 35.0%
AGATTAAGCAAGAATCTGCA+TGG - chr2_2:55376518-55376537 Msa0258760:CDS 35.0%
TAGAGATTTACACATAAGCG+AGG - chr2_2:55376871-55376890 Msa0258760:intron 35.0%
AAGACTCAATGAACAACTTG+AGG - chr2_2:55376922-55376941 Msa0258760:intron 35.0%
ACACTTGGTAGACAGAATTT+AGG - chr2_2:55377223-55377242 Msa0258760:CDS 35.0%
ATCATTCAAAATGGAGGGTT+TGG - chr2_2:55377430-55377449 Msa0258760:intron 35.0%
AGTACTAAAATGGTGTGTTG+AGG - chr2_2:55377555-55377574 Msa0258760:intron 35.0%
! AGTAATTTTCTCACTCCGTT+AGG - chr2_2:55377592-55377611 Msa0258760:intron 35.0%
ATGTTCCTTCAAACAGGAAA+TGG - chr2_2:55376106-55376125 Msa0258760:exon 35.0%
TAGAACCATTTCCTGTTTGA+AGG + chr2_2:55376114-55376133 None:intergenic 35.0%
!! TCAGGTGTCCATTTTAATCT+AGG + chr2_2:55376172-55376191 None:intergenic 35.0%
ATAAACCTTGCATGAAGATC+AGG + chr2_2:55376190-55376209 None:intergenic 35.0%
TTGCTTCTGCAATAGAAAGA+TGG + chr2_2:55376343-55376362 None:intergenic 35.0%
AAATGATATAAGGTAAGCCC+TGG + chr2_2:55376398-55376417 None:intergenic 35.0%
TCTTGCTTAATCTGTACTTC+TGG + chr2_2:55376511-55376530 None:intergenic 35.0%
AGATTAAGCAAGAATCTGCA+TGG - chr2_2:55376518-55376537 Msa0258760:CDS 35.0%
TAGAGATTTACACATAAGCG+AGG - chr2_2:55376871-55376890 Msa0258760:intron 35.0%
AAGACTCAATGAACAACTTG+AGG - chr2_2:55376922-55376941 Msa0258760:intron 35.0%
ACACTTGGTAGACAGAATTT+AGG - chr2_2:55377223-55377242 Msa0258760:CDS 35.0%
ATCATTCAAAATGGAGGGTT+TGG - chr2_2:55377430-55377449 Msa0258760:intron 35.0%
AGTACTAAAATGGTGTGTTG+AGG - chr2_2:55377555-55377574 Msa0258760:intron 35.0%
! AGTAATTTTCTCACTCCGTT+AGG - chr2_2:55377592-55377611 Msa0258760:intron 35.0%
! AATGCTTGTTGAGCTTGTCT+TGG + chr2_2:55375932-55375951 None:intergenic 40.0%
GAATGTCAATACCATCTGAG+AGG - chr2_2:55376080-55376099 Msa0258760:three_prime_UTR 40.0%
!! GGAAATGGTTCTAGTGATTC+AGG - chr2_2:55376121-55376140 Msa0258760:CDS 40.0%
GAAGCAGTTAATCAGTTAGG+CGG - chr2_2:55376211-55376230 Msa0258760:CDS 40.0%
TCTATGTTACTCGAGATTCG+AGG + chr2_2:55376291-55376310 None:intergenic 40.0%
ATGAAACTCATGGGAATTCC+AGG - chr2_2:55376377-55376396 Msa0258760:CDS 40.0%
TGAAACTCATGGGAATTCCA+GGG - chr2_2:55376378-55376397 Msa0258760:CDS 40.0%
! CTGTACTTCTGGTGATGAAA+AGG + chr2_2:55376500-55376519 None:intergenic 40.0%
!! GAGAGACTTTCTGAAACCAA+TGG - chr2_2:55376691-55376710 Msa0258760:CDS 40.0%
! GAACAACTTGAGGTGAGTTT+TGG - chr2_2:55376932-55376951 Msa0258760:intron 40.0%
!!! CTGCCACAGGTTTTGAATAT+TGG + chr2_2:55377128-55377147 None:intergenic 40.0%
CAATATTCAAAACCTGTGGC+AGG - chr2_2:55377126-55377145 Msa0258760:intron 40.0%
TACAAAGACACTTGCAGCTA+AGG - chr2_2:55377149-55377168 Msa0258760:CDS 40.0%
!! CTTTCTCAAGCACTGATTGA+AGG + chr2_2:55377195-55377214 None:intergenic 40.0%
GAGAAAGCTCAAGAAACACT+TGG - chr2_2:55377208-55377227 Msa0258760:CDS 40.0%
TGTTGAATTCAGACACTGTG+AGG + chr2_2:55377305-55377324 None:intergenic 40.0%
TCAGAGATGAAGGAGTTACA+AGG - chr2_2:55377328-55377347 Msa0258760:intron 40.0%
! TTTTGTCCTCAACCAAACGA+CGG - chr2_2:55377352-55377371 Msa0258760:CDS 40.0%
ACAACCATGTGTTCATGGAA+AGG - chr2_2:55377476-55377495 Msa0258760:CDS 40.0%
CTTTCCTTTCCATGAACACA+TGG + chr2_2:55377483-55377502 None:intergenic 40.0%
CAACAAGCAACTGAATTAGC+AGG - chr2_2:55377505-55377524 Msa0258760:CDS 40.0%
ACAAAGGAACACTGCAAGAT+TGG - chr2_2:55377699-55377718 Msa0258760:CDS 40.0%
AGATTGGATCTAAACAGTCG+TGG - chr2_2:55377715-55377734 Msa0258760:CDS 40.0%
AGTCGTGGAGATAACAATGA+AGG - chr2_2:55377730-55377749 Msa0258760:CDS 40.0%
CTATCGATATCATGCATGCT+TGG - chr2_2:55377950-55377969 Msa0258760:five_prime_UTR 40.0%
! AATGCTTGTTGAGCTTGTCT+TGG + chr2_2:55375932-55375951 None:intergenic 40.0%
GAATGTCAATACCATCTGAG+AGG - chr2_2:55376080-55376099 Msa0258760:three_prime_UTR 40.0%
!! GGAAATGGTTCTAGTGATTC+AGG - chr2_2:55376121-55376140 Msa0258760:CDS 40.0%
GAAGCAGTTAATCAGTTAGG+CGG - chr2_2:55376211-55376230 Msa0258760:CDS 40.0%
TCTATGTTACTCGAGATTCG+AGG + chr2_2:55376291-55376310 None:intergenic 40.0%
ATGAAACTCATGGGAATTCC+AGG - chr2_2:55376377-55376396 Msa0258760:CDS 40.0%
TGAAACTCATGGGAATTCCA+GGG - chr2_2:55376378-55376397 Msa0258760:CDS 40.0%
! CTGTACTTCTGGTGATGAAA+AGG + chr2_2:55376500-55376519 None:intergenic 40.0%
!! GAGAGACTTTCTGAAACCAA+TGG - chr2_2:55376691-55376710 Msa0258760:CDS 40.0%
! GAACAACTTGAGGTGAGTTT+TGG - chr2_2:55376932-55376951 Msa0258760:intron 40.0%
!!! CTGCCACAGGTTTTGAATAT+TGG + chr2_2:55377128-55377147 None:intergenic 40.0%
CAATATTCAAAACCTGTGGC+AGG - chr2_2:55377126-55377145 Msa0258760:intron 40.0%
TACAAAGACACTTGCAGCTA+AGG - chr2_2:55377149-55377168 Msa0258760:CDS 40.0%
!! CTTTCTCAAGCACTGATTGA+AGG + chr2_2:55377195-55377214 None:intergenic 40.0%
GAGAAAGCTCAAGAAACACT+TGG - chr2_2:55377208-55377227 Msa0258760:CDS 40.0%
TGTTGAATTCAGACACTGTG+AGG + chr2_2:55377305-55377324 None:intergenic 40.0%
TCAGAGATGAAGGAGTTACA+AGG - chr2_2:55377328-55377347 Msa0258760:intron 40.0%
! TTTTGTCCTCAACCAAACGA+CGG - chr2_2:55377352-55377371 Msa0258760:CDS 40.0%
ACAACCATGTGTTCATGGAA+AGG - chr2_2:55377476-55377495 Msa0258760:CDS 40.0%
CTTTCCTTTCCATGAACACA+TGG + chr2_2:55377483-55377502 None:intergenic 40.0%
CAACAAGCAACTGAATTAGC+AGG - chr2_2:55377505-55377524 Msa0258760:CDS 40.0%
ACAAAGGAACACTGCAAGAT+TGG - chr2_2:55377699-55377718 Msa0258760:CDS 40.0%
AGATTGGATCTAAACAGTCG+TGG - chr2_2:55377715-55377734 Msa0258760:CDS 40.0%
AGTCGTGGAGATAACAATGA+AGG - chr2_2:55377730-55377749 Msa0258760:CDS 40.0%
CTATCGATATCATGCATGCT+TGG - chr2_2:55377950-55377969 Msa0258760:five_prime_UTR 40.0%
AGGCACATGTTCCTTCAAAC+AGG - chr2_2:55376100-55376119 Msa0258760:exon 45.0%
AGTTAATCAGTTAGGCGGAG+CGG - chr2_2:55376216-55376235 Msa0258760:CDS 45.0%
TATCAGATCCTCTACAGCGA+CGG - chr2_2:55376993-55377012 Msa0258760:CDS 45.0%
CAGCTAAGGATAGAAGCTCA+AGG - chr2_2:55377163-55377182 Msa0258760:CDS 45.0%
ATCGTCTGACCGATCACAAA+AGG - chr2_2:55377399-55377418 Msa0258760:intron 45.0%
AGGCACATGTTCCTTCAAAC+AGG - chr2_2:55376100-55376119 Msa0258760:exon 45.0%
AGTTAATCAGTTAGGCGGAG+CGG - chr2_2:55376216-55376235 Msa0258760:CDS 45.0%
TATCAGATCCTCTACAGCGA+CGG - chr2_2:55376993-55377012 Msa0258760:CDS 45.0%
CAGCTAAGGATAGAAGCTCA+AGG - chr2_2:55377163-55377182 Msa0258760:CDS 45.0%
ATCGTCTGACCGATCACAAA+AGG - chr2_2:55377399-55377418 Msa0258760:intron 45.0%
AGGAACATGTGCCTCTCAGA+TGG + chr2_2:55376094-55376113 None:intergenic 50.0%
GGACACCTGATCTTCATGCA+AGG - chr2_2:55376182-55376201 Msa0258760:CDS 50.0%
CGCGTTTGGATTCTCTGCAA+CGG + chr2_2:55377077-55377096 None:intergenic 50.0%
AGTGTCTTTGTACCTGCCAC+AGG + chr2_2:55377141-55377160 None:intergenic 50.0%
AGGAACATGTGCCTCTCAGA+TGG + chr2_2:55376094-55376113 None:intergenic 50.0%
GGACACCTGATCTTCATGCA+AGG - chr2_2:55376182-55376201 Msa0258760:CDS 50.0%
CGCGTTTGGATTCTCTGCAA+CGG + chr2_2:55377077-55377096 None:intergenic 50.0%
AGTGTCTTTGTACCTGCCAC+AGG + chr2_2:55377141-55377160 None:intergenic 50.0%
GGCGCTGCAAATGCAGATTG+AGG - chr2_2:55376892-55376911 Msa0258760:intron 55.0%
TCTCTGCAACGGCTGCAGAA+CGG + chr2_2:55377066-55377085 None:intergenic 55.0%
ATCGAGCCGTCGTTTGGTTG+AGG + chr2_2:55377361-55377380 None:intergenic 55.0%
TCAACCAAACGACGGCTCGA+TGG - chr2_2:55377360-55377379 Msa0258760:CDS 55.0%
GGCGCTGCAAATGCAGATTG+AGG - chr2_2:55376892-55376911 Msa0258760:intron 55.0%
TCTCTGCAACGGCTGCAGAA+CGG + chr2_2:55377066-55377085 None:intergenic 55.0%
ATCGAGCCGTCGTTTGGTTG+AGG + chr2_2:55377361-55377380 None:intergenic 55.0%
TCAACCAAACGACGGCTCGA+TGG - chr2_2:55377360-55377379 Msa0258760:CDS 55.0%
CAGCTCTACCGTCGCTGTAG+AGG + chr2_2:55377004-55377023 None:intergenic 60.0%
CTGTCCATCGAGCCGTCGTT+TGG + chr2_2:55377367-55377386 None:intergenic 60.0%
CAGCTCTACCGTCGCTGTAG+AGG + chr2_2:55377004-55377023 None:intergenic 60.0%
CTGTCCATCGAGCCGTCGTT+TGG + chr2_2:55377367-55377386 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 55375929 55377979 55375929 ID=Msa0258760;Name=Msa0258760
chr2_2 mRNA 55375929 55377979 55375929 ID=Msa0258760-mRNA-1;Parent=Msa0258760;Name=Msa0258760-mRNA-1;_AED=0.10;_eAED=0.10;_QI=105|1|1|1|1|1|6|178|389
chr2_2 exon 55375929 55376760 55375929 ID=Msa0258760-mRNA-1:exon:16726;Parent=Msa0258760-mRNA-1
chr2_2 exon 55376965 55377034 55376965 ID=Msa0258760-mRNA-1:exon:16725;Parent=Msa0258760-mRNA-1
chr2_2 exon 55377144 55377243 55377144 ID=Msa0258760-mRNA-1:exon:16724;Parent=Msa0258760-mRNA-1
chr2_2 exon 55377336 55377396 55377336 ID=Msa0258760-mRNA-1:exon:16723;Parent=Msa0258760-mRNA-1
chr2_2 exon 55377475 55377551 55377475 ID=Msa0258760-mRNA-1:exon:16722;Parent=Msa0258760-mRNA-1
chr2_2 exon 55377667 55377979 55377667 ID=Msa0258760-mRNA-1:exon:16721;Parent=Msa0258760-mRNA-1
chr2_2 five_prime_UTR 55377875 55377979 55377875 ID=Msa0258760-mRNA-1:five_prime_utr;Parent=Msa0258760-mRNA-1
chr2_2 CDS 55377667 55377874 55377667 ID=Msa0258760-mRNA-1:cds;Parent=Msa0258760-mRNA-1
chr2_2 CDS 55377475 55377551 55377475 ID=Msa0258760-mRNA-1:cds;Parent=Msa0258760-mRNA-1
chr2_2 CDS 55377336 55377396 55377336 ID=Msa0258760-mRNA-1:cds;Parent=Msa0258760-mRNA-1
chr2_2 CDS 55377144 55377243 55377144 ID=Msa0258760-mRNA-1:cds;Parent=Msa0258760-mRNA-1
chr2_2 CDS 55376965 55377034 55376965 ID=Msa0258760-mRNA-1:cds;Parent=Msa0258760-mRNA-1
chr2_2 CDS 55376107 55376760 55376107 ID=Msa0258760-mRNA-1:cds;Parent=Msa0258760-mRNA-1
chr2_2 three_prime_UTR 55375929 55376106 55375929 ID=Msa0258760-mRNA-1:three_prime_utr;Parent=Msa0258760-mRNA-1
Gene Sequence

>Msa0258760

ATGTATCATCATCATCATCAAGGAAAAAATATTCACTCTTCTTCAAGAATGTCAATACCATCTGAGAGGCACATGTTCCTTCAAACAGGAAATGGTTCTAGTGATTCAGGACTTGTGCTCTCAACTGATGCAAAACCTAGATTAAAATGGACACCTGATCTTCATGCAAGGTTTATAGAAGCAGTTAATCAGTTAGGCGGAGCGGACAAAGCAACTCCAAAAACAGTAATGAAACTCATGGGAATTCCAGGGCTTACCTTATATCATTTAAAGAGTCATCTTCAGAAGTACAGATTAAGCAAGAATCTGCATGGACAAAGCAGCAGTAATGTGACACACAAAATAAACACTCATGCAGCTTCAGTGAGTGATGAGAGACTTTCTGAAACCAATGGAACTCACATGAATAAATTAACACTTGGACCACAGACTAATAACAACAACAAAGATTTACACATAAGCGAGGCGCTGCAAATGCAGATTGAGGTTCAGAGAAGACTCAATGAACAACTTGAGGTACAAAGACACTTGCAGCTAAGGATAGAAGCTCAAGGAAAATACCTTCAATCAGTGCTTGAGAAAGCTCAAGAAACACTTGGTAGACAGAATTTAGGAATAGTAGGGCTTGAAGCAGCAAAAGTTCAACTATCAGAGCTTGTGTCAAAAGTATCCTCACAGTGTCTGAATTCAACATTTTCAGAGATGAAGGAGTTACAAGGATTTTGTCCTCAACCAAACGACGGCTCGATGGACAGTAGTTGCTTAACATCGTCTGACCGATCACAAAAGGAACAAGAAATCATTCAAAATGGAGGGTTTGGATTAAGACACTTCAACAAAAATAACAACCATGTGTTCATGGAAAGGAAAGAACAACAAGCAACTGAATTAGCAGGTTCTGTTCAAAACCTTAAAAACAATGAAGTACTAAAATGGTGTGTTGAGGAAGTGAAAAAGAACAGTAATTTTCTCACTCCGTTAGGAAATAATAATGAATTAGAAAGAAATCATGGAAATTTGTCTATGAACATTGGAGTTGAGAATCATTCAGATATTGGTGAGTTTCAACAAAGGAACACTGCAAGATTGGATCTAAACAGTCGTGGAGATAACAATGAAGGTGCAACAACTTGTAAACAACTTGATTTGAATAGGTTCAGTTGGAACTGA
Protein sequence

>Msa0258760

MYHHHHQGKNIHSSSRMSIPSERHMFLQTGNGSSDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSSSNVTHKINTHAASVSDERLSETNGTHMNKLTLGPQTNNNNKDLHISEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQSVLEKAQETLGRQNLGIVGLEAAKVQLSELVSKVSSQCLNSTFSEMKELQGFCPQPNDGSMDSSCLTSSDRSQKEQEIIQNGGFGLRHFNKNNNHVFMERKEQQATELAGSVQNLKNNEVLKWCVEEVKKNSNFLTPLGNNNELERNHGNLSMNIGVENHSDIGEFQQRNTARLDLNSRGDNNEGATTCKQLDLNRFSWN*