Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828940 | AFK46804.1 | 87.755 | 49 | 6 | 0 | 63 | 111 | 86 | 134 | 5.15e-21 | 94.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828940 | sp|Q8VZU2|SY132_ARATH | 53.061 | 49 | 23 | 0 | 63 | 111 | 81 | 129 | 4.99e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828940 | I3T2R2 | 87.755 | 49 | 6 | 0 | 63 | 111 | 86 | 134 | 2.46e-21 | 94.0 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012060 | Msa0828940 | 0.809382 | 1.944897e-50 | -8.615850e-47 |
| Msa0017510 | Msa0828940 | 0.831788 | 1.368882e-55 | -8.615850e-47 |
| Msa0021510 | Msa0828940 | 0.805274 | 1.444765e-49 | -8.615850e-47 |
| Msa0028700 | Msa0828940 | 0.800746 | 1.247431e-48 | -8.615850e-47 |
| Msa0032330 | Msa0828940 | 0.808627 | 2.822022e-50 | -8.615850e-47 |
| Msa0062860 | Msa0828940 | 0.811648 | 6.303730e-51 | -8.615850e-47 |
| Msa0075880 | Msa0828940 | 0.800468 | 1.420883e-48 | -8.615850e-47 |
| Msa0100000 | Msa0828940 | 0.805026 | 1.627959e-49 | -8.615850e-47 |
| Msa0114060 | Msa0828940 | 0.824872 | 6.379832e-54 | -8.615850e-47 |
| Msa0608160 | Msa0828940 | 0.800294 | 1.541901e-48 | -8.615850e-47 |
| Msa0626820 | Msa0828940 | 0.816871 | 4.422298e-52 | -8.615850e-47 |
| Msa0648080 | Msa0828940 | 0.803334 | 3.663044e-49 | -8.615850e-47 |
| Msa0656530 | Msa0828940 | 0.813309 | 2.731946e-51 | -8.615850e-47 |
| Msa0657610 | Msa0828940 | 0.806485 | 8.038823e-50 | -8.615850e-47 |
| Msa0657730 | Msa0828940 | 0.894986 | 1.471023e-75 | -8.615850e-47 |
| Msa0661190 | Msa0828940 | -0.804317 | 2.289372e-49 | -8.615850e-47 |
| Msa0662650 | Msa0828940 | 0.800315 | 1.527006e-48 | -8.615850e-47 |
| Msa0663240 | Msa0828940 | 0.841285 | 5.214086e-58 | -8.615850e-47 |
| Msa0664950 | Msa0828940 | 0.802874 | 4.560638e-49 | -8.615850e-47 |
| Msa0672690 | Msa0828940 | 0.814341 | 1.618384e-51 | -8.615850e-47 |
| Msa0676080 | Msa0828940 | 0.805250 | 1.461665e-49 | -8.615850e-47 |
| Msa0688480 | Msa0828940 | 0.836154 | 1.104919e-56 | -8.615850e-47 |
| Msa0696640 | Msa0828940 | 0.805004 | 1.645294e-49 | -8.615850e-47 |
| Msa0701010 | Msa0828940 | 0.826099 | 3.266304e-54 | -8.615850e-47 |
| Msa0702780 | Msa0828940 | 0.915621 | 4.737800e-85 | -8.615850e-47 |
| Msa0708860 | Msa0828940 | 0.800754 | 1.242664e-48 | -8.615850e-47 |
| Msa0731940 | Msa0828940 | 0.807452 | 5.019209e-50 | -8.615850e-47 |
| Msa0738500 | Msa0828940 | 0.815647 | 8.303271e-52 | -8.615850e-47 |
| Msa0743720 | Msa0828940 | 0.828466 | 8.852936e-55 | -8.615850e-47 |
| Msa0744170 | Msa0828940 | -0.801324 | 9.501559e-49 | -8.615850e-47 |
| Msa0760130 | Msa0828940 | 0.809829 | 1.559616e-50 | -8.615850e-47 |
| Msa0766630 | Msa0828940 | 0.803376 | 3.590250e-49 | -8.615850e-47 |
| Msa0768290 | Msa0828940 | 0.818648 | 1.756876e-52 | -8.615850e-47 |
| Msa0777230 | Msa0828940 | 0.802028 | 6.813768e-49 | -8.615850e-47 |
| Msa0777570 | Msa0828940 | -0.801909 | 7.208280e-49 | -8.615850e-47 |
| Msa0787470 | Msa0828940 | 0.801389 | 9.214921e-49 | -8.615850e-47 |
| Msa0797170 | Msa0828940 | 0.805043 | 1.614937e-49 | -8.615850e-47 |
| Msa0810220 | Msa0828940 | 0.806769 | 7.002714e-50 | -8.615850e-47 |
| Msa0828940 | Msa0842650 | 0.818381 | 2.019186e-52 | -8.615850e-47 |
| Msa0828940 | Msa0877250 | 0.815967 | 7.046535e-52 | -8.615850e-47 |
| Msa0828940 | Msa0880140 | 0.829089 | 6.254840e-55 | -8.615850e-47 |
| Msa0828940 | Msa0885280 | 0.825072 | 5.722703e-54 | -8.615850e-47 |
| Msa0828940 | Msa0893140 | 0.845814 | 3.211335e-59 | -8.615850e-47 |
| Msa0828940 | Msa0897880 | 0.803685 | 3.097496e-49 | -8.615850e-47 |
| Msa0828940 | Msa0898670 | 0.804158 | 2.470897e-49 | -8.615850e-47 |
| Msa0828940 | Msa0907070 | 0.819267 | 1.270254e-52 | -8.615850e-47 |
| Msa0828940 | Msa0907260 | 0.800418 | 1.455102e-48 | -8.615850e-47 |
| Msa0828940 | Msa0921780 | 0.807125 | 5.889069e-50 | -8.615850e-47 |
| Msa0828940 | Msa0925250 | 0.823465 | 1.365280e-53 | -8.615850e-47 |
| Msa0828940 | Msa0925290 | 0.800092 | 1.694513e-48 | -8.615850e-47 |
| Msa0828940 | Msa0931520 | 0.805397 | 1.361481e-49 | -8.615850e-47 |
| Msa0828940 | Msa0942080 | -0.801952 | 7.063686e-49 | -8.615850e-47 |
| Msa0828940 | Msa0942200 | 0.821545 | 3.814029e-53 | -8.615850e-47 |
| Msa0828940 | Msa0953120 | 0.866882 | 2.060148e-65 | -8.615850e-47 |
| Msa0828940 | Msa0954910 | 0.803710 | 3.061361e-49 | -8.615850e-47 |
| Msa0828940 | Msa0969520 | 0.807222 | 5.617972e-50 | -8.615850e-47 |
| Msa0828940 | Msa0976670 | 0.807859 | 4.114930e-50 | -8.615850e-47 |
| Msa0828940 | Msa0980090 | 0.827212 | 1.772304e-54 | -8.615850e-47 |
| Msa0828940 | Msa0991830 | 0.802857 | 4.597169e-49 | -8.615850e-47 |
| Msa0828940 | Msa0991930 | 0.820197 | 7.789625e-53 | -8.615850e-47 |
| Msa0828940 | Msa0998690 | 0.819723 | 9.998863e-53 | -8.615850e-47 |
| Msa0828940 | Msa1000900 | 0.804304 | 2.303199e-49 | -8.615850e-47 |
| Msa0828940 | Msa1014540 | 0.825660 | 4.153646e-54 | -8.615850e-47 |
| Msa0828940 | Msa1030970 | 0.809295 | 2.030863e-50 | -8.615850e-47 |
| Msa0828940 | Msa1039800 | 0.805598 | 1.235329e-49 | -8.615850e-47 |
| Msa0828940 | Msa1052830 | 0.803851 | 2.862184e-49 | -8.615850e-47 |
| Msa0828940 | Msa1075220 | -0.827451 | 1.553298e-54 | -8.615850e-47 |
| Msa0828940 | Msa1082500 | 0.820878 | 5.434437e-53 | -8.615850e-47 |
| Msa0828940 | Msa1082580 | 0.807825 | 4.182599e-50 | -8.615850e-47 |
| Msa0828940 | Msa1085740 | 0.834918 | 2.269980e-56 | -8.615850e-47 |
| Msa0828940 | Msa1116130 | -0.805412 | 1.351840e-49 | -8.615850e-47 |
| Msa0828940 | Msa1136090 | 0.801094 | 1.058868e-48 | -8.615850e-47 |
| Msa0828940 | Msa1137570 | 0.825676 | 4.115556e-54 | -8.615850e-47 |
| Msa0828940 | Msa1153410 | 0.831049 | 2.080029e-55 | -8.615850e-47 |
| Msa0828940 | Msa1156020 | 0.813524 | 2.450521e-51 | -8.615850e-47 |
| Msa0828940 | Msa1162550 | -0.834774 | 2.467346e-56 | -8.615850e-47 |
| Msa0828940 | Msa1174040 | 0.802195 | 6.294174e-49 | -8.615850e-47 |
| Msa0828940 | Msa1179460 | 0.802674 | 5.015808e-49 | -8.615850e-47 |
| Msa0828940 | Msa1184420 | 0.808316 | 3.288663e-50 | -8.615850e-47 |
| Msa0828940 | Msa1186060 | 0.819874 | 9.236317e-53 | -8.615850e-47 |
| Msa0828940 | Msa1199220 | 0.821810 | 3.312647e-53 | -8.615850e-47 |
| Msa0828940 | Msa1212940 | 0.800028 | 1.746245e-48 | -8.615850e-47 |
| Msa0828940 | Msa1226660 | 0.814210 | 1.729835e-51 | -8.615850e-47 |
| Msa0828940 | Msa1233890 | 0.807805 | 4.224663e-50 | -8.615850e-47 |
| Msa0828940 | Msa1238930 | 0.854735 | 1.010119e-61 | -8.615850e-47 |
| Msa0828940 | Msa1239530 | 0.816076 | 6.662892e-52 | -8.615850e-47 |
| Msa0828940 | Msa1244250 | 0.834047 | 3.756554e-56 | -8.615850e-47 |
| Msa0828940 | Msa1249490 | 0.819588 | 1.073266e-52 | -8.615850e-47 |
| Msa0828940 | Msa1253020 | 0.802348 | 5.856096e-49 | -8.615850e-47 |
| Msa0828940 | Msa1276890 | 0.800946 | 1.135116e-48 | -8.615850e-47 |
| Msa0828940 | Msa1283860 | 0.817228 | 3.676400e-52 | -8.615850e-47 |
| Msa0828940 | Msa1284680 | 0.830226 | 3.307916e-55 | -8.615850e-47 |
| Msa0828940 | Msa1312560 | 0.801906 | 7.217053e-49 | -8.615850e-47 |
| Msa0828940 | Msa1319800 | 0.808668 | 2.765647e-50 | -8.615850e-47 |
| Msa0828940 | Msa1348950 | 0.861585 | 9.250643e-64 | -8.615850e-47 |
| Msa0828940 | Msa1362880 | 0.807330 | 5.328488e-50 | -8.615850e-47 |
| Msa0828940 | Msa1367080 | 0.804649 | 1.951954e-49 | -8.615850e-47 |
| Msa0828940 | Msa1393040 | 0.800419 | 1.454054e-48 | -8.615850e-47 |
| Msa0828940 | Msa1403480 | 0.815373 | 9.556138e-52 | -8.615850e-47 |
| Msa0828940 | Msa1411020 | 0.836906 | 7.108457e-57 | -8.615850e-47 |
| Msa0828940 | Msa1420490 | 0.828645 | 8.012749e-55 | -8.615850e-47 |
| Msa0828940 | Msa1423390 | 0.828660 | 7.947355e-55 | -8.615850e-47 |
| Msa0828940 | Msa1423880 | 0.803973 | 2.699599e-49 | -8.615850e-47 |
| Msa0828940 | Msa1424290 | 0.832588 | 8.675856e-56 | -8.615850e-47 |
| Msa0828940 | Msa1426000 | 0.819683 | 1.020911e-52 | -8.615850e-47 |
| Msa0828940 | Msa1427230 | 0.811846 | 5.708568e-51 | -8.615850e-47 |
| Msa0828940 | Msa1434350 | 0.835093 | 2.051046e-56 | -8.615850e-47 |
| Msa0828940 | Msa1439320 | 0.840852 | 6.772365e-58 | -8.615850e-47 |
| Msa0828940 | Msa1440370 | 0.830617 | 2.655595e-55 | -8.615850e-47 |
| Msa0828940 | Msa1440810 | 0.832662 | 8.318572e-56 | -8.615850e-47 |
| Msa0828940 | Msa1443060 | 0.803189 | 3.926352e-49 | -8.615850e-47 |
| Msa0828940 | Msa1451620 | -0.829291 | 5.587157e-55 | -8.615850e-47 |
| Msa0828940 | Msa1455490 | 0.808730 | 2.682316e-50 | -8.615850e-47 |
| Msa0828940 | Msa1460830 | 0.813742 | 2.193822e-51 | -8.615850e-47 |
| Msa0828940 | Msa1464940 | 0.812666 | 3.779184e-51 | -8.615850e-47 |
| Msa0122590 | Msa0828940 | 0.802049 | 6.744800e-49 | -8.615850e-47 |
| Msa0150800 | Msa0828940 | 0.800401 | 1.466196e-48 | -8.615850e-47 |
| Msa0157290 | Msa0828940 | 0.832639 | 8.426765e-56 | -8.615850e-47 |
| Msa0165210 | Msa0828940 | 0.801663 | 8.098253e-49 | -8.615850e-47 |
| Msa0165220 | Msa0828940 | 0.800938 | 1.139296e-48 | -8.615850e-47 |
| Msa0173990 | Msa0828940 | 0.802284 | 6.034691e-49 | -8.615850e-47 |
| Msa0178960 | Msa0828940 | 0.839274 | 1.748091e-57 | -8.615850e-47 |
| Msa0178970 | Msa0828940 | 0.808536 | 2.951584e-50 | -8.615850e-47 |
| Msa0180500 | Msa0828940 | 0.819175 | 1.333186e-52 | -8.615850e-47 |
| Msa0188460 | Msa0828940 | 0.810266 | 1.255339e-50 | -8.615850e-47 |
| Msa0197660 | Msa0828940 | 0.813163 | 2.940774e-51 | -8.615850e-47 |
| Msa0205510 | Msa0828940 | 0.802028 | 6.812827e-49 | -8.615850e-47 |
| Msa0208090 | Msa0828940 | 0.805969 | 1.032708e-49 | -8.615850e-47 |
| Msa0215320 | Msa0828940 | -0.839784 | 1.287824e-57 | -8.615850e-47 |
| Msa0220580 | Msa0828940 | 0.813893 | 2.032594e-51 | -8.615850e-47 |
| Msa0223260 | Msa0828940 | 0.859485 | 4.004449e-63 | -8.615850e-47 |
| Msa0226890 | Msa0828940 | 0.805005 | 1.644835e-49 | -8.615850e-47 |
| Msa0233300 | Msa0828940 | 0.816585 | 5.127402e-52 | -8.615850e-47 |
| Msa0379640 | Msa0828940 | 0.812740 | 3.640758e-51 | -8.615850e-47 |
| Msa0380740 | Msa0828940 | 0.814452 | 1.529512e-51 | -8.615850e-47 |
| Msa0391430 | Msa0828940 | 0.804976 | 1.667509e-49 | -8.615850e-47 |
| Msa0395790 | Msa0828940 | 0.806282 | 8.872159e-50 | -8.615850e-47 |
| Msa0416300 | Msa0828940 | 0.807553 | 4.777588e-50 | -8.615850e-47 |
| Msa0416650 | Msa0828940 | 0.807179 | 5.736697e-50 | -8.615850e-47 |
| Msa0417500 | Msa0828940 | 0.804993 | 1.654308e-49 | -8.615850e-47 |
| Msa0424320 | Msa0828940 | 0.819043 | 1.428815e-52 | -8.615850e-47 |
| Msa0425790 | Msa0828940 | 0.804120 | 2.516428e-49 | -8.615850e-47 |
| Msa0431690 | Msa0828940 | 0.827865 | 1.235084e-54 | -8.615850e-47 |
| Msa0444750 | Msa0828940 | -0.806036 | 9.998519e-50 | -8.615850e-47 |
| Msa0453330 | Msa0828940 | 0.804033 | 2.623312e-49 | -8.615850e-47 |
| Msa0466390 | Msa0828940 | 0.820591 | 6.326482e-53 | -8.615850e-47 |
| Msa0479340 | Msa0828940 | 0.815698 | 8.089195e-52 | -8.615850e-47 |
| Msa0239800 | Msa0828940 | 0.809331 | 1.994742e-50 | -8.615850e-47 |
| Msa0243100 | Msa0828940 | 0.810984 | 8.782587e-51 | -8.615850e-47 |
| Msa0258760 | Msa0828940 | 0.816947 | 4.251793e-52 | -8.615850e-47 |
| Msa0278110 | Msa0828940 | 0.810013 | 1.423365e-50 | -8.615850e-47 |
| Msa0279790 | Msa0828940 | 0.805044 | 1.614475e-49 | -8.615850e-47 |
| Msa0288100 | Msa0828940 | 0.812501 | 4.106934e-51 | -8.615850e-47 |
| Msa0296710 | Msa0828940 | 0.816338 | 5.823137e-52 | -8.615850e-47 |
| Msa0317290 | Msa0828940 | 0.802914 | 4.474891e-49 | -8.615850e-47 |
| Msa0317510 | Msa0828940 | 0.811408 | 7.107204e-51 | -8.615850e-47 |
| Msa0319170 | Msa0828940 | 0.810122 | 1.348299e-50 | -8.615850e-47 |
| Msa0320740 | Msa0828940 | 0.807603 | 4.663605e-50 | -8.615850e-47 |
| Msa0323080 | Msa0828940 | 0.803821 | 2.903709e-49 | -8.615850e-47 |
| Msa0339620 | Msa0828940 | 0.801498 | 8.754123e-49 | -8.615850e-47 |
| Msa0340450 | Msa0828940 | 0.805458 | 1.321926e-49 | -8.615850e-47 |
| Msa0344830 | Msa0828940 | 0.812688 | 3.738417e-51 | -8.615850e-47 |
| Msa0344910 | Msa0828940 | 0.821261 | 4.435750e-53 | -8.615850e-47 |
| Msa0344980 | Msa0828940 | 0.808650 | 2.790424e-50 | -8.615850e-47 |
| Msa0350990 | Msa0828940 | 0.825718 | 4.022713e-54 | -8.615850e-47 |
| Msa0351030 | Msa0828940 | 0.821873 | 3.202190e-53 | -8.615850e-47 |
| Msa0351100 | Msa0828940 | 0.808225 | 3.439249e-50 | -8.615850e-47 |
| Msa0359030 | Msa0828940 | 0.812094 | 5.039506e-51 | -8.615850e-47 |
| Msa0484780 | Msa0828940 | 0.800893 | 1.163947e-48 | -8.615850e-47 |
| Msa0495330 | Msa0828940 | 0.807781 | 4.274175e-50 | -8.615850e-47 |
| Msa0512750 | Msa0828940 | 0.815240 | 1.023311e-51 | -8.615850e-47 |
| Msa0523940 | Msa0828940 | 0.833307 | 5.751080e-56 | -8.615850e-47 |
| Msa0529040 | Msa0828940 | 0.802499 | 5.450061e-49 | -8.615850e-47 |
| Msa0532350 | Msa0828940 | 0.814849 | 1.249172e-51 | -8.615850e-47 |
| Msa0554740 | Msa0828940 | 0.823576 | 1.285983e-53 | -8.615850e-47 |
| Msa0555020 | Msa0828940 | 0.804948 | 1.690846e-49 | -8.615850e-47 |
| Msa0562440 | Msa0828940 | 0.833731 | 4.507457e-56 | -8.615850e-47 |
| Msa0585230 | Msa0828940 | 0.828609 | 8.175526e-55 | -8.615850e-47 |
| Msa0597330 | Msa0828940 | 0.819817 | 9.516983e-53 | -8.615850e-47 |
| Msa0599890 | Msa0828940 | 0.812359 | 4.411505e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828940 | MtrunA17_Chr2g0322801 | 87.755 | 49 | 6 | 0 | 63 | 111 | 86 | 134 | 4.62e-24 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828940 | AT5G08080.5 | 53.061 | 49 | 23 | 0 | 63 | 111 | 81 | 129 | 4.55e-13 | 63.9 |
| Msa0828940 | AT5G08080.2 | 53.061 | 49 | 23 | 0 | 63 | 111 | 81 | 129 | 4.55e-13 | 63.9 |
| Msa0828940 | AT5G08080.1 | 53.061 | 49 | 23 | 0 | 63 | 111 | 81 | 129 | 5.07e-13 | 64.7 |
| Msa0828940 | AT5G08080.4 | 53.061 | 49 | 23 | 0 | 63 | 111 | 81 | 129 | 5.07e-13 | 64.7 |
| Msa0828940 | AT5G08080.3 | 53.061 | 49 | 23 | 0 | 63 | 111 | 92 | 140 | 6.04e-13 | 64.3 |
| Msa0828940 | AT3G03800.2 | 53.061 | 49 | 23 | 0 | 63 | 111 | 82 | 130 | 1.36e-12 | 63.5 |
| Msa0828940 | AT3G03800.1 | 53.061 | 49 | 23 | 0 | 63 | 111 | 82 | 130 | 1.36e-12 | 63.5 |
Find 39 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTAATAGGTTTACACTTT+TGG | 0.189771 | 5_4:+1891748 | Msa0828940:intron |
| GATGGAGGAAGAAGGGAAAT+TGG | 0.330889 | 5_4:+1887049 | Msa0828940:CDS |
| GGGTTGAAACTGCTCAGTTC+AGG | 0.385105 | 5_4:+1891795 | Msa0828940:CDS |
| ATCTGTTAGCAGCCGCTGAT+TGG | 0.396087 | 5_4:-1892168 | None:intergenic |
| CTGTACAAAGTGCCAATGTT+TGG | 0.406462 | 5_4:+1892318 | Msa0828940:three_prime_UTR |
| AATGGAGGGAGAGGAGAAGA+AGG | 0.408209 | 5_4:+1887016 | Msa0828940:exon |
| AGAAGGGAAATTGGAGAAGA+AGG | 0.422017 | 5_4:+1887058 | Msa0828940:CDS |
| AATTTCCCTTCTTCCTCCAT+CGG | 0.440960 | 5_4:-1887047 | None:intergenic |
| CATTCTTGCTCCGTCAATAC+CGG | 0.466523 | 5_4:-1888919 | None:intergenic |
| TTATGAAGAGGATTTGAAGC+AGG | 0.468923 | 5_4:+1887913 | Msa0828940:CDS |
| GAAAAGGATATTGATGAGGT+TGG | 0.486934 | 5_4:+1888706 | Msa0828940:intron |
| AAGAAGCCGATGGAGGAAGA+AGG | 0.492336 | 5_4:+1887041 | Msa0828940:CDS |
| AGCAGTTTCAACCCCGGCCA+TGG | 0.495635 | 5_4:-1891786 | None:intergenic |
| CAAAAGCCTGGCTGTGAGAA+GGG | 0.499127 | 5_4:+1888894 | Msa0828940:CDS |
| CCGGTTCCCTTCTCACAGCC+AGG | 0.501105 | 5_4:-1888900 | None:intergenic |
| TTAGCAGCCGCTGATTGGTA+TGG | 0.505830 | 5_4:-1892163 | None:intergenic |
| CCTGGCTGTGAGAAGGGAAC+CGG | 0.506291 | 5_4:+1888900 | Msa0828940:CDS |
| TGCATAGCATAAAACTGCAT+TGG | 0.512421 | 5_4:+1892263 | Msa0828940:three_prime_UTR |
| GAGAAGGGAACCGGTATTGA+CGG | 0.524006 | 5_4:+1888909 | Msa0828940:CDS |
| CTTTGGTTCATGCAGCTGCT+CGG | 0.524841 | 5_4:+1887716 | Msa0828940:CDS |
| CTAAACAATAGACAAAAGCC+TGG | 0.535553 | 5_4:+1888882 | Msa0828940:CDS |
| AGCATAAAACTGCATTGGCT+CGG | 0.535889 | 5_4:+1892268 | Msa0828940:three_prime_UTR |
| ACAAAAGCCTGGCTGTGAGA+AGG | 0.542434 | 5_4:+1888893 | Msa0828940:CDS |
| CAACATTGAAGATTATGAAG+AGG | 0.549840 | 5_4:+1887901 | Msa0828940:CDS |
| GAAGAAGGAAAAGAAGCCGA+TGG | 0.563967 | 5_4:+1887031 | Msa0828940:CDS |
| TCAGCGGCTGCTAACAGATA+AGG | 0.565027 | 5_4:+1892172 | Msa0828940:three_prime_UTR |
| TAACGAGAGAATGGAGGGAG+AGG | 0.567757 | 5_4:+1887007 | Msa0828940:exon |
| AGAAGCCGATGGAGGAAGAA+GGG | 0.579655 | 5_4:+1887042 | Msa0828940:CDS |
| AAACATAACGAGAGAATGGA+GGG | 0.586270 | 5_4:+1887002 | Msa0828940:exon |
| AGAGCTGCAATTAAGTTCAG+AGG | 0.598621 | 5_4:+1887857 | Msa0828940:CDS |
| AATTAAGTTCAGAGGAGTCG+AGG | 0.627825 | 5_4:+1887865 | Msa0828940:CDS |
| ATAAGCAACAGTCCAAACAT+TGG | 0.634133 | 5_4:-1892330 | None:intergenic |
| AAAACATAACGAGAGAATGG+AGG | 0.634827 | 5_4:+1887001 | Msa0828940:exon |
| GAAGGAAAAGAAGCCGATGG+AGG | 0.645079 | 5_4:+1887034 | Msa0828940:CDS |
| GATGGAAAAGGATATTGATG+AGG | 0.655016 | 5_4:+1888702 | Msa0828940:intron |
| GGTTGGAAAGATTGCACATG+TGG | 0.657598 | 5_4:+1888723 | Msa0828940:CDS |
| CGGCTGCTAACAGATAAGGA+TGG | 0.682111 | 5_4:+1892176 | Msa0828940:three_prime_UTR |
| GAACTGAGCAGTTTCAACCC+CGG | 0.704213 | 5_4:-1891792 | None:intergenic |
| ATTGAAGCCATACCAATCAG+CGG | 0.704257 | 5_4:+1892156 | Msa0828940:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAGCATATAATAAATTTT+TGG | + | chr5_4:1887808-1887827 | Msa0828940:intron | 10.0% |
| !!! | TCCAATAAAAATTTTAATAT+CGG | - | chr5_4:1891867-1891886 | None:intergenic | 10.0% |
| !! | AATTATATATGAAAACATTA+TGG | + | chr5_4:1891918-1891937 | Msa0828940:intron | 10.0% |
| !! | TTCATTAAGAAATTGAAATT+GGG | - | chr5_4:1887161-1887180 | None:intergenic | 15.0% |
| !! | AATTTCAATTTCTTAATGAA+GGG | + | chr5_4:1887161-1887180 | Msa0828940:intron | 15.0% |
| !! | AAATTGAATGTAAAAATTGT+AGG | + | chr5_4:1887585-1887604 | Msa0828940:intron | 15.0% |
| !! | AATTGAATGTAAAAATTGTA+GGG | + | chr5_4:1887586-1887605 | Msa0828940:intron | 15.0% |
| !! | AAAAATATTCTCAACATTAA+AGG | - | chr5_4:1887678-1887697 | None:intergenic | 15.0% |
| !!! | TAATGTTGAGAATATTTTTT+CGG | + | chr5_4:1887679-1887698 | Msa0828940:intron | 15.0% |
| !!! | AAATTTCATTCATTCTTTTA+TGG | + | chr5_4:1887766-1887785 | Msa0828940:intron | 15.0% |
| !! | AATAATTGATTGAAAACTAT+AGG | - | chr5_4:1887990-1888009 | None:intergenic | 15.0% |
| !! | ATTCAAGATACAAAAAAAAA+AGG | - | chr5_4:1888014-1888033 | None:intergenic | 15.0% |
| !! | TGTTATATAGATTTCAAATA+TGG | + | chr5_4:1888821-1888840 | Msa0828940:intron | 15.0% |
| !!! | TTTACATTGATTGATTTTAT+TGG | + | chr5_4:1889577-1889596 | Msa0828940:intron | 15.0% |
| !!! | TTACATTGATTGATTTTATT+GGG | + | chr5_4:1889578-1889597 | Msa0828940:intron | 15.0% |
| !!! | GTTTTTTCTGATTATTTTAA+AGG | + | chr5_4:1890843-1890862 | Msa0828940:intron | 15.0% |
| !!! | TATTGTTTTCAAAGATAATT+TGG | + | chr5_4:1891076-1891095 | Msa0828940:intron | 15.0% |
| !!! | AATTTTAATATCGGTTAAAA+TGG | - | chr5_4:1891858-1891877 | None:intergenic | 15.0% |
| !!! | ACCGATATTAAAATTTTTAT+TGG | + | chr5_4:1891863-1891882 | Msa0828940:intron | 15.0% |
| !! | TCATTAAGAAATTGAAATTG+GGG | - | chr5_4:1887160-1887179 | None:intergenic | 20.0% |
| !! | CTTCATTAAGAAATTGAAAT+TGG | - | chr5_4:1887162-1887181 | None:intergenic | 20.0% |
| !! | CAATTTCAATTTCTTAATGA+AGG | + | chr5_4:1887160-1887179 | Msa0828940:intron | 20.0% |
| !! | AATTAAGCTTTCTTTGAATA+AGG | - | chr5_4:1887214-1887233 | None:intergenic | 20.0% |
| !!! | TGTAATTGTTTTATGATGAA+TGG | + | chr5_4:1887624-1887643 | Msa0828940:intron | 20.0% |
| !!! | AATGTTGAGAATATTTTTTC+GGG | + | chr5_4:1887680-1887699 | Msa0828940:intron | 20.0% |
| !!! | AATTTTAACTTCAATGTGAA+TGG | + | chr5_4:1888399-1888418 | Msa0828940:intron | 20.0% |
| !! | ATGGATAAAAAATAGTTAAC+CGG | + | chr5_4:1888840-1888859 | Msa0828940:intron | 20.0% |
| !!! | ACTTTGTATATCATGAATTT+TGG | - | chr5_4:1889311-1889330 | None:intergenic | 20.0% |
| !! | AAGTTTACATTTCAAAATAC+AGG | - | chr5_4:1889415-1889434 | None:intergenic | 20.0% |
| !! | AGAATTTAATACATAGAGAA+GGG | - | chr5_4:1889768-1889787 | None:intergenic | 20.0% |
| !! | TAGAATTTAATACATAGAGA+AGG | - | chr5_4:1889769-1889788 | None:intergenic | 20.0% |
| !! | CTTCTGTTTAATAATTTCAA+GGG | + | chr5_4:1889947-1889966 | Msa0828940:intron | 20.0% |
| !!! | TTCTTTTTCATTTTCTGTTA+TGG | + | chr5_4:1890304-1890323 | Msa0828940:intron | 20.0% |
| !!! | CCATTTGCATTTTTTTTAAA+GGG | - | chr5_4:1890602-1890621 | None:intergenic | 20.0% |
| !!! | CCTTTAAAAAAAATGCAAAT+GGG | + | chr5_4:1890600-1890619 | Msa0828940:intron | 20.0% |
| !!! | CTTTAAAAAAAATGCAAATG+GGG | + | chr5_4:1890601-1890620 | Msa0828940:intron | 20.0% |
| !!! | TCTGAATAATTGTTTTTGAT+CGG | + | chr5_4:1890802-1890821 | Msa0828940:intron | 20.0% |
| !! | AAACATAGATTTACATTCAA+AGG | - | chr5_4:1890967-1890986 | None:intergenic | 20.0% |
| !!! | ATCATTCATGATTTTTATAG+TGG | + | chr5_4:1891032-1891051 | Msa0828940:intron | 20.0% |
| !!! | TTCATGATTTGATTTAGTTA+TGG | + | chr5_4:1891112-1891131 | Msa0828940:intron | 20.0% |
| !! | ATAATGAATTACTACCTAAA+TGG | - | chr5_4:1891201-1891220 | None:intergenic | 20.0% |
| !! | ATATTTCACATATTATACTC+TGG | - | chr5_4:1891499-1891518 | None:intergenic | 20.0% |
| !!! | AGTTTTGAGTTTAGTTTTAT+TGG | + | chr5_4:1891681-1891700 | Msa0828940:intron | 20.0% |
| !!! | ATTGATCCATTTTCTTTAAT+AGG | + | chr5_4:1891735-1891754 | Msa0828940:intron | 20.0% |
| !! | TGTAAACCTATTAAAGAAAA+TGG | - | chr5_4:1891744-1891763 | None:intergenic | 20.0% |
| !! | TAGTATAACAATCTGTTATT+TGG | + | chr5_4:1891941-1891960 | Msa0828940:intron | 20.0% |
| ! | GTTTGGATGAAATTGAAATT+GGG | - | chr5_4:1887122-1887141 | None:intergenic | 25.0% |
| ! | AGAAAGCTTAATTGAAAGTA+TGG | + | chr5_4:1887221-1887240 | Msa0828940:intron | 25.0% |
| !! | GAAAGCTTAATTGAAAGTAT+GGG | + | chr5_4:1887222-1887241 | Msa0828940:intron | 25.0% |
| !! | AAAGCTTAATTGAAAGTATG+GGG | + | chr5_4:1887223-1887242 | Msa0828940:intron | 25.0% |
| ! | AAAAAGCTATTTGACAATAC+TGG | - | chr5_4:1887411-1887430 | None:intergenic | 25.0% |
| ! | TATGATAATTTCATCCCATA+AGG | + | chr5_4:1887538-1887557 | Msa0828940:intron | 25.0% |
| ! | TTACATAGAACATACCTTAT+GGG | - | chr5_4:1887555-1887574 | None:intergenic | 25.0% |
| ! | TTTACATAGAACATACCTTA+TGG | - | chr5_4:1887556-1887575 | None:intergenic | 25.0% |
| !! | TCTGAAAATCAATTTGTTTC+AGG | + | chr5_4:1887647-1887666 | Msa0828940:intron | 25.0% |
| !!! | ATGTTGAGAATATTTTTTCG+GGG | + | chr5_4:1887681-1887700 | Msa0828940:intron | 25.0% |
| ! | TGTTGTGATTTAAATGAGTT+TGG | + | chr5_4:1888034-1888053 | Msa0828940:intron | 25.0% |
| !! | TAATGCTCATAAGATTTTAC+TGG | + | chr5_4:1888648-1888667 | Msa0828940:intron | 25.0% |
| ! | TGGATAAAAAATAGTTAACC+GGG | + | chr5_4:1888841-1888860 | Msa0828940:intron | 25.0% |
| !!! | GAAAAACAACTTCTAGTTTT+AGG | - | chr5_4:1889100-1889119 | None:intergenic | 25.0% |
| ! | AACACAGTTAACTTTATCAA+GGG | - | chr5_4:1889239-1889258 | None:intergenic | 25.0% |
| ! | TAAAATTCATGATATGCACA+AGG | + | chr5_4:1889360-1889379 | Msa0828940:intron | 25.0% |
| !! | TGAAATGTAAACTTTGAGAA+AGG | + | chr5_4:1889421-1889440 | Msa0828940:intron | 25.0% |
| !! | AAGGTTTGAACATGTAATTT+TGG | + | chr5_4:1889539-1889558 | Msa0828940:intron | 25.0% |
| ! | AGTAGAAGTTCGATAAATAA+TGG | + | chr5_4:1889680-1889699 | Msa0828940:intron | 25.0% |
| ! | GCTTCTGTTTAATAATTTCA+AGG | + | chr5_4:1889946-1889965 | Msa0828940:intron | 25.0% |
| ! | TTTAATAATTTCAAGGGATG+TGG | + | chr5_4:1889953-1889972 | Msa0828940:intron | 25.0% |
| !! | CCCTTTAAAAAAAATGCAAA+TGG | + | chr5_4:1890599-1890618 | Msa0828940:intron | 25.0% |
| !!! | CCCATTTGCATTTTTTTTAA+AGG | - | chr5_4:1890603-1890622 | None:intergenic | 25.0% |
| ! | GAAACAAAAGACTCAAAAAA+CGG | - | chr5_4:1890733-1890752 | None:intergenic | 25.0% |
| !!! | AAAGGTTTGATTTTCCTTTT+TGG | + | chr5_4:1890861-1890880 | Msa0828940:intron | 25.0% |
| ! | AGCAAAAAAACAAACCAAAA+AGG | - | chr5_4:1890878-1890897 | None:intergenic | 25.0% |
| !!! | ATGATTTTTATAGTGGACAA+AGG | + | chr5_4:1891039-1891058 | Msa0828940:intron | 25.0% |
| ! | TAAATCAAATCATGAAACCA+AGG | - | chr5_4:1891108-1891127 | None:intergenic | 25.0% |
| ! | AAAAATGTAATCAGCCATTT+AGG | + | chr5_4:1891184-1891203 | Msa0828940:intron | 25.0% |
| ! | ATCTCTAATGTGTATCTATT+CGG | - | chr5_4:1891254-1891273 | None:intergenic | 25.0% |
| ! | CAATGACTTAAAAGATGTTT+AGG | + | chr5_4:1891473-1891492 | Msa0828940:intron | 25.0% |
| !! | CTTTAATAGGTTTACACTTT+TGG | + | chr5_4:1891748-1891767 | Msa0828940:intron | 25.0% |
| !! | TGTTATTTGGCATTGTAATA+TGG | + | chr5_4:1891954-1891973 | Msa0828940:intron | 25.0% |
| ! | AGACAATAATACTTCCTTTA+AGG | + | chr5_4:1891979-1891998 | Msa0828940:intron | 25.0% |
| ! | GACAATAATACTTCCTTTAA+GGG | + | chr5_4:1891980-1891999 | Msa0828940:intron | 25.0% |
| AGAAAAACATAACGAGAGAA+TGG | + | chr5_4:1886998-1887017 | Msa0828940:exon | 30.0% | |
| GGTTTGGATGAAATTGAAAT+TGG | - | chr5_4:1887123-1887142 | None:intergenic | 30.0% | |
| ! | AAGCTTAATTGAAAGTATGG+GGG | + | chr5_4:1887224-1887243 | Msa0828940:intron | 30.0% |
| TCATTTCTGTTTGATCTGAA+TGG | + | chr5_4:1887314-1887333 | Msa0828940:intron | 30.0% | |
| AGATCAGATACAAAGGAAAA+TGG | - | chr5_4:1887376-1887395 | None:intergenic | 30.0% | |
| ! | ATTTTCCTTTGTATCTGATC+TGG | + | chr5_4:1887375-1887394 | Msa0828940:intron | 30.0% |
| ! | TTTTACCAGATCAGATACAA+AGG | - | chr5_4:1887383-1887402 | None:intergenic | 30.0% |
| TATTCTCAACATTAAAGGAC+AGG | - | chr5_4:1887673-1887692 | None:intergenic | 30.0% | |
| !!! | TGTTGAGAATATTTTTTCGG+GGG | + | chr5_4:1887682-1887701 | Msa0828940:intron | 30.0% |
| CAACATTGAAGATTATGAAG+AGG | + | chr5_4:1887901-1887920 | Msa0828940:CDS | 30.0% | |
| TGTGATTTAAATGAGTTTGG+AGG | + | chr5_4:1888037-1888056 | Msa0828940:intron | 30.0% | |
| AGTTTGGAGGAATTAATTTC+AGG | + | chr5_4:1888050-1888069 | Msa0828940:intron | 30.0% | |
| !!! | CAACTCTTTCAAGTTTTTCA+TGG | + | chr5_4:1888104-1888123 | Msa0828940:intron | 30.0% |
| ! | AAGTTTTTCATGGCATACAA+AGG | + | chr5_4:1888114-1888133 | Msa0828940:intron | 30.0% |
| !!! | GGCATACAAAGGATTTTTTA+TGG | + | chr5_4:1888125-1888144 | Msa0828940:intron | 30.0% |
| !! | TAGTTCTGATTATTGTGATC+TGG | + | chr5_4:1888279-1888298 | Msa0828940:intron | 30.0% |
| ! | TCATAAGATTTTACTGGTAC+TGG | + | chr5_4:1888654-1888673 | Msa0828940:intron | 30.0% |
| CTGAATCATAACAATTGTCT+TGG | + | chr5_4:1888680-1888699 | Msa0828940:intron | 30.0% | |
| ATCATAACAATTGTCTTGGA+TGG | + | chr5_4:1888684-1888703 | Msa0828940:intron | 30.0% | |
| ATTCTGCATAAAACATATCC+CGG | - | chr5_4:1888862-1888881 | None:intergenic | 30.0% | |
| AGTTCCTTGACTAAAAAGTT+CGG | + | chr5_4:1889036-1889055 | Msa0828940:intron | 30.0% | |
| TGAGAAGATAGACATAAACT+TGG | - | chr5_4:1889122-1889141 | None:intergenic | 30.0% | |
| AATACAAGATGAATATCGTG+AGG | + | chr5_4:1889173-1889192 | Msa0828940:intron | 30.0% | |
| ACACAGTTAACTTTATCAAG+GGG | - | chr5_4:1889238-1889257 | None:intergenic | 30.0% | |
| CAACACAGTTAACTTTATCA+AGG | - | chr5_4:1889240-1889259 | None:intergenic | 30.0% | |
| ! | GTAGTACTTTAGAAATTTGC+TGG | + | chr5_4:1889267-1889286 | Msa0828940:intron | 30.0% |
| CATTTCAAAATACAGGCAAA+TGG | - | chr5_4:1889408-1889427 | None:intergenic | 30.0% | |
| ! | AATGAAAGTTGAGATCCTTT+TGG | + | chr5_4:1889446-1889465 | Msa0828940:intron | 30.0% |
| ATCTACTTTGATATGACTCA+TGG | + | chr5_4:1889493-1889512 | Msa0828940:intron | 30.0% | |
| ATTACATGTTCAAACCTTTG+TGG | - | chr5_4:1889537-1889556 | None:intergenic | 30.0% | |
| TGCACTTAGTAACAACAAAA+GGG | - | chr5_4:1889615-1889634 | None:intergenic | 30.0% | |
| !! | CAAAGTATATTGATGATGAG+TGG | + | chr5_4:1889705-1889724 | Msa0828940:intron | 30.0% |
| TTCTAAACACCCAAACAAAT+AGG | + | chr5_4:1889740-1889759 | Msa0828940:intron | 30.0% | |
| GTTTCAGTTACTTGCATAAT+AGG | + | chr5_4:1889856-1889875 | Msa0828940:intron | 30.0% | |
| !! | TTTGTGATTAGTTTGAGCTA+TGG | + | chr5_4:1890389-1890408 | Msa0828940:intron | 30.0% |
| !!! | TTTAGCTTTTGCTTCTGTTA+TGG | + | chr5_4:1890487-1890506 | Msa0828940:intron | 30.0% |
| !! | TTAGCTTTTGCTTCTGTTAT+GGG | + | chr5_4:1890488-1890507 | Msa0828940:intron | 30.0% |
| ACCATTGATAAGCTAGAAAA+CGG | - | chr5_4:1890654-1890673 | None:intergenic | 30.0% | |
| !!! | TTTTTGATCGGTGTTGATAT+TGG | + | chr5_4:1890814-1890833 | Msa0828940:intron | 30.0% |
| !!! | GTTTGTTTTTTTGCTGATTC+TGG | + | chr5_4:1890883-1890902 | Msa0828940:intron | 30.0% |
| AGATAATTTGGATCATACCT+TGG | + | chr5_4:1891088-1891107 | Msa0828940:intron | 30.0% | |
| !! | GAATAACCAACCACTTTTAT+TGG | - | chr5_4:1891153-1891172 | None:intergenic | 30.0% |
| ! | ATTAGAGATTCATGTCGATT+GGG | + | chr5_4:1891265-1891284 | Msa0828940:intron | 30.0% |
| ATTTAATGTGTCTGATACTC+TGG | - | chr5_4:1891527-1891546 | None:intergenic | 30.0% | |
| !!! | GTTTGTTTTTGCGCAATTTT+TGG | + | chr5_4:1891572-1891591 | Msa0828940:intron | 30.0% |
| ! | TTTGGTTTATGATGTTGACT+TGG | + | chr5_4:1891590-1891609 | Msa0828940:intron | 30.0% |
| !! | TTGGTTTATGATGTTGACTT+GGG | + | chr5_4:1891591-1891610 | Msa0828940:intron | 30.0% |
| ATAGTACATGACAACAACAT+AGG | - | chr5_4:1891651-1891670 | None:intergenic | 30.0% | |
| AACTGTCTATTGTTGCTATA+AGG | - | chr5_4:1892053-1892072 | None:intergenic | 30.0% | |
| AAAACATAACGAGAGAATGG+AGG | + | chr5_4:1887001-1887020 | Msa0828940:exon | 35.0% | |
| AAACATAACGAGAGAATGGA+GGG | + | chr5_4:1887002-1887021 | Msa0828940:exon | 35.0% | |
| ! | GAAGGCAAGCTTCAATTTTA+AGG | + | chr5_4:1887076-1887095 | Msa0828940:CDS | 35.0% |
| TGAAATTGGGCTGATAGAAA+GGG | - | chr5_4:1887109-1887128 | None:intergenic | 35.0% | |
| TTGAAATTGGGCTGATAGAA+AGG | - | chr5_4:1887110-1887129 | None:intergenic | 35.0% | |
| ATTGAAATTGGGGCTGAAAA+GGG | - | chr5_4:1887150-1887169 | None:intergenic | 35.0% | |
| AATTGAAATTGGGGCTGAAA+AGG | - | chr5_4:1887151-1887170 | None:intergenic | 35.0% | |
| ! | TTAATTGAAAGTATGGGGGT+TGG | + | chr5_4:1887228-1887247 | Msa0828940:intron | 35.0% |
| ! | TAATTGAAAGTATGGGGGTT+GGG | + | chr5_4:1887229-1887248 | Msa0828940:intron | 35.0% |
| GAGGAAGAAACAAGAAGAAT+TGG | + | chr5_4:1887262-1887281 | Msa0828940:intron | 35.0% | |
| ! | TTATGAAGAGGATTTGAAGC+AGG | + | chr5_4:1887913-1887932 | Msa0828940:CDS | 35.0% |
| ! | ATTTGAAGCAGGTGAGTTAT+GGG | + | chr5_4:1887924-1887943 | Msa0828940:intron | 35.0% |
| CGTCTATGTTTCTTAATCTC+AGG | + | chr5_4:1888078-1888097 | Msa0828940:intron | 35.0% | |
| AAAAAACCTTACCATCGCTA+AGG | - | chr5_4:1888203-1888222 | None:intergenic | 35.0% | |
| ! | CAAGTTTCAGTATTTTCGCA+TGG | + | chr5_4:1888481-1888500 | Msa0828940:intron | 35.0% |
| CGCATGGAGTATAAGAAAAT+TGG | + | chr5_4:1888497-1888516 | Msa0828940:intron | 35.0% | |
| ! | ATAGCAATAGCAATTTTCGC+AGG | + | chr5_4:1888524-1888543 | Msa0828940:intron | 35.0% |
| !! | ACAAAAGCATTTGCCATGAA+AGG | + | chr5_4:1888573-1888592 | Msa0828940:intron | 35.0% |
| CCTTGTAACAATACCTTTCA+TGG | - | chr5_4:1888589-1888608 | None:intergenic | 35.0% | |
| !! | CCATGAAAGGTATTGTTACA+AGG | + | chr5_4:1888586-1888605 | Msa0828940:intron | 35.0% |
| ! | GGCAATGTCTGTAATTCTTT+TGG | + | chr5_4:1888607-1888626 | Msa0828940:intron | 35.0% |
| ACAATTGTCTTGGATGGAAA+AGG | + | chr5_4:1888690-1888709 | Msa0828940:intron | 35.0% | |
| GATGGAAAAGGATATTGATG+AGG | + | chr5_4:1888702-1888721 | Msa0828940:intron | 35.0% | |
| GAAAAGGATATTGATGAGGT+TGG | + | chr5_4:1888706-1888725 | Msa0828940:intron | 35.0% | |
| CTAAACAATAGACAAAAGCC+TGG | + | chr5_4:1888882-1888901 | Msa0828940:CDS | 35.0% | |
| GTTCCTTGACTAAAAAGTTC+GGG | + | chr5_4:1889037-1889056 | Msa0828940:intron | 35.0% | |
| TTCCTTGACTAAAAAGTTCG+GGG | + | chr5_4:1889038-1889057 | Msa0828940:intron | 35.0% | |
| AAGTTAACTGTGTTGCACTA+CGG | + | chr5_4:1889245-1889264 | Msa0828940:intron | 35.0% | |
| ! | CATGGAATGAGATAGCTTTT+TGG | + | chr5_4:1889511-1889530 | Msa0828940:intron | 35.0% |
| CTGCACTTAGTAACAACAAA+AGG | - | chr5_4:1889616-1889635 | None:intergenic | 35.0% | |
| !!! | CTTTTGTTGTTACTAAGTGC+AGG | + | chr5_4:1889614-1889633 | Msa0828940:intron | 35.0% |
| AGAAGGGATCCTATTTGTTT+GGG | - | chr5_4:1889752-1889771 | None:intergenic | 35.0% | |
| ! | ATGATATCAACGTTTTGTCG+TGG | + | chr5_4:1890043-1890062 | Msa0828940:intron | 35.0% |
| ! | GTCTGTTTTACTAATGGTGT+TGG | + | chr5_4:1890100-1890119 | Msa0828940:intron | 35.0% |
| ACAGCAAAAAACATTCCCTA+GGG | - | chr5_4:1890128-1890147 | None:intergenic | 35.0% | |
| AACAGCAAAAAACATTCCCT+AGG | - | chr5_4:1890129-1890148 | None:intergenic | 35.0% | |
| !!! | TAGGGAATGTTTTTTGCTGT+TGG | + | chr5_4:1890128-1890147 | Msa0828940:intron | 35.0% |
| !! | CTGTTGGTTTAACTGTTTAG+AGG | + | chr5_4:1890144-1890163 | Msa0828940:intron | 35.0% |
| TTAACTGTTTAGAGGTTGTC+TGG | + | chr5_4:1890152-1890171 | Msa0828940:intron | 35.0% | |
| ! | TCATTTTCTGTTATGGACTC+TGG | + | chr5_4:1890311-1890330 | Msa0828940:intron | 35.0% |
| ! | CATTTTCTGTTATGGACTCT+GGG | + | chr5_4:1890312-1890331 | Msa0828940:intron | 35.0% |
| ! | TTTTGCTTCTGTTATGGGTT+GGG | + | chr5_4:1890493-1890512 | Msa0828940:intron | 35.0% |
| ! | GGACGAAAGAAAAGTACAAT+AGG | - | chr5_4:1890539-1890558 | None:intergenic | 35.0% |
| !!! | TCCGTTTTCTAGCTTATCAA+TGG | + | chr5_4:1890650-1890669 | Msa0828940:intron | 35.0% |
| !!! | TTTCTCTGTTTCTGCGATTT+TGG | + | chr5_4:1890749-1890768 | Msa0828940:intron | 35.0% |
| TTGGCGATAGATTTCATGTT+AGG | + | chr5_4:1890768-1890787 | Msa0828940:intron | 35.0% | |
| TGGCGATAGATTTCATGTTA+GGG | + | chr5_4:1890769-1890788 | Msa0828940:intron | 35.0% | |
| ACATTCAAAGGACTCAAGTT+AGG | - | chr5_4:1890955-1890974 | None:intergenic | 35.0% | |
| TGTAACACTGCCAATAAAAG+TGG | + | chr5_4:1891140-1891159 | Msa0828940:intron | 35.0% | |
| CATTAGAGATTCATGTCGAT+TGG | + | chr5_4:1891264-1891283 | Msa0828940:intron | 35.0% | |
| CTTGATATATTGCAGATGCA+TGG | + | chr5_4:1891344-1891363 | Msa0828940:intron | 35.0% | |
| AAGATGAGAACAACTCAACT+GGG | + | chr5_4:1891376-1891395 | Msa0828940:intron | 35.0% | |
| !! | CATTGATGGACTTGAGATAT+GGG | + | chr5_4:1891431-1891450 | Msa0828940:intron | 35.0% |
| TATGGGTTTCCATCAAATCA+TGG | + | chr5_4:1891448-1891467 | Msa0828940:intron | 35.0% | |
| ATGGGTTTCCATCAAATCAT+GGG | + | chr5_4:1891449-1891468 | Msa0828940:intron | 35.0% | |
| TGCGCAAAAACAAACAAACA+TGG | - | chr5_4:1891567-1891586 | None:intergenic | 35.0% | |
| ! | ATACTTCCTTTAAGGGAGAA+AGG | + | chr5_4:1891987-1892006 | Msa0828940:intron | 35.0% |
| GTATTGTTCTACCAGAGATA+TGG | + | chr5_4:1892085-1892104 | Msa0828940:intron | 35.0% | |
| AATGTCTTGCTTTACACTTC+AGG | + | chr5_4:1892128-1892147 | Msa0828940:intron | 35.0% | |
| !! | TGCAGTTTTATGCTATGCAA+AGG | - | chr5_4:1892262-1892281 | None:intergenic | 35.0% |
| TGCATAGCATAAAACTGCAT+TGG | + | chr5_4:1892263-1892282 | Msa0828940:three_prime_UTR | 35.0% | |
| ATAAGCAACAGTCCAAACAT+TGG | - | chr5_4:1892333-1892352 | None:intergenic | 35.0% | |
| AATTTCCCTTCTTCCTCCAT+CGG | - | chr5_4:1887050-1887069 | None:intergenic | 40.0% | |
| AGAAGGGAAATTGGAGAAGA+AGG | + | chr5_4:1887058-1887077 | Msa0828940:CDS | 40.0% | |
| ! | TTGATCTGAATGGTGCTGAA+TGG | + | chr5_4:1887324-1887343 | Msa0828940:intron | 40.0% |
| AGAGCTGCAATTAAGTTCAG+AGG | + | chr5_4:1887857-1887876 | Msa0828940:CDS | 40.0% | |
| AATTAAGTTCAGAGGAGTCG+AGG | + | chr5_4:1887865-1887884 | Msa0828940:CDS | 40.0% | |
| ! | GATTTGAAGCAGGTGAGTTA+TGG | + | chr5_4:1887923-1887942 | Msa0828940:intron | 40.0% |
| ! | TTTGAAGCAGGTGAGTTATG+GGG | + | chr5_4:1887925-1887944 | Msa0828940:intron | 40.0% |
| ! | TTAAGAAGCGCAAGTCTCTT+TGG | + | chr5_4:1888175-1888194 | Msa0828940:intron | 40.0% |
| ! | ATTTTCGCAGGAAGCTAATG+AGG | + | chr5_4:1888536-1888555 | Msa0828940:intron | 40.0% |
| GTCAAGGAACTGCAATTTCA+AGG | - | chr5_4:1889027-1889046 | None:intergenic | 40.0% | |
| !! | ATCCCCGAACTTTTTAGTCA+AGG | - | chr5_4:1889043-1889062 | None:intergenic | 40.0% |
| GTGTTTCAGAACAACATACC+TGG | - | chr5_4:1889078-1889097 | None:intergenic | 40.0% | |
| AGATGAATATCGTGAGGTTG+TGG | + | chr5_4:1889179-1889198 | Msa0828940:intron | 40.0% | |
| GTGGAGAGAAGAGTTATTAC+AGG | + | chr5_4:1889198-1889217 | Msa0828940:intron | 40.0% | |
| GCAGAATAAGTGTGACCAAA+AGG | - | chr5_4:1889464-1889483 | None:intergenic | 40.0% | |
| !! | AGATAGCTTTTTGGCCACAA+AGG | + | chr5_4:1889520-1889539 | Msa0828940:intron | 40.0% |
| !! | ATTGATGATGAGTGGTGAAG+AGG | + | chr5_4:1889713-1889732 | Msa0828940:intron | 40.0% |
| GAGAAGGGATCCTATTTGTT+TGG | - | chr5_4:1889753-1889772 | None:intergenic | 40.0% | |
| ! | TCTTTTCCAAGCTGAGATCA+AGG | + | chr5_4:1889912-1889931 | Msa0828940:intron | 40.0% |
| ! | CTTTTCCAAGCTGAGATCAA+GGG | + | chr5_4:1889913-1889932 | Msa0828940:intron | 40.0% |
| TTATTCCCTTGATCTCAGCT+TGG | - | chr5_4:1889921-1889940 | None:intergenic | 40.0% | |
| AGTGTTTAATAGCCACAACC+CGG | + | chr5_4:1890002-1890021 | Msa0828940:intron | 40.0% | |
| TCCACAATTTAGTCGAGATC+CGG | - | chr5_4:1890024-1890043 | None:intergenic | 40.0% | |
| CATTAGTAAAACAGACGCAG+AGG | - | chr5_4:1890096-1890115 | None:intergenic | 40.0% | |
| ! | CTCTGCGTCTGTTTTACTAA+TGG | + | chr5_4:1890094-1890113 | Msa0828940:intron | 40.0% |
| GAAAAACAGCTGCTGCTAAT+TGG | - | chr5_4:1890208-1890227 | None:intergenic | 40.0% | |
| GTGTATTTGAGGGTGGTTTA+TGG | + | chr5_4:1890334-1890353 | Msa0828940:intron | 40.0% | |
| TATTTGAGGGTGGTTTATGG+AGG | + | chr5_4:1890337-1890356 | Msa0828940:intron | 40.0% | |
| TTAGGGTCTTTCGGTTGTTT+GGG | + | chr5_4:1890362-1890381 | Msa0828940:intron | 40.0% | |
| !! | TGCACATAACTTGCTTCTGT+CGG | + | chr5_4:1890446-1890465 | Msa0828940:intron | 40.0% |
| !! | AACTTGCTTCTGTCGGATTT+TGG | + | chr5_4:1890453-1890472 | Msa0828940:intron | 40.0% |
| ! | ACTTGCTTCTGTCGGATTTT+GGG | + | chr5_4:1890454-1890473 | Msa0828940:intron | 40.0% |
| ! | CTTTTGCTTCTGTTATGGGT+TGG | + | chr5_4:1890492-1890511 | Msa0828940:intron | 40.0% |
| GGCGATAGATTTCATGTTAG+GGG | + | chr5_4:1890770-1890789 | Msa0828940:intron | 40.0% | |
| ! | GCTGATTCTGGTCTGTTATT+TGG | + | chr5_4:1890895-1890914 | Msa0828940:intron | 40.0% |
| TCAAAGGACTCAAGTTAGGT+TGG | - | chr5_4:1890951-1890970 | None:intergenic | 40.0% | |
| ACACTGCCAATAAAAGTGGT+TGG | + | chr5_4:1891144-1891163 | Msa0828940:intron | 40.0% | |
| ! | CAGTTGAGTTGTTCTCATCT+TGG | - | chr5_4:1891377-1891396 | None:intergenic | 40.0% |
| CAAGATGAGAACAACTCAAC+TGG | + | chr5_4:1891375-1891394 | Msa0828940:intron | 40.0% | |
| CCATATCTCAAGTCCATCAA+TGG | - | chr5_4:1891433-1891452 | None:intergenic | 40.0% | |
| !! | CCATTGATGGACTTGAGATA+TGG | + | chr5_4:1891430-1891449 | Msa0828940:intron | 40.0% |
| GTCATTGACCCATGATTTGA+TGG | - | chr5_4:1891460-1891479 | None:intergenic | 40.0% | |
| !! | TTATGATGTTGACTTGGGAC+AGG | + | chr5_4:1891596-1891615 | Msa0828940:intron | 40.0% |
| ! | GGTTCTCTTTTATCTTGCCA+TGG | + | chr5_4:1891769-1891788 | Msa0828940:CDS | 40.0% |
| TCAGTTCCTTTCTCCCTTAA+AGG | - | chr5_4:1891996-1892015 | None:intergenic | 40.0% | |
| TTCTACCAGAGATATGGTCA+TGG | + | chr5_4:1892091-1892110 | Msa0828940:intron | 40.0% | |
| TATGACCATGACCATATCTC+TGG | - | chr5_4:1892099-1892118 | None:intergenic | 40.0% | |
| ATTGAAGCCATACCAATCAG+CGG | + | chr5_4:1892156-1892175 | Msa0828940:three_prime_UTR | 40.0% | |
| !! | AGCATAAAACTGCATTGGCT+CGG | + | chr5_4:1892268-1892287 | Msa0828940:three_prime_UTR | 40.0% |
| ! | CTGTACAAAGTGCCAATGTT+TGG | + | chr5_4:1892318-1892337 | Msa0828940:three_prime_UTR | 40.0% |
| GAAGAAGGAAAAGAAGCCGA+TGG | + | chr5_4:1887031-1887050 | Msa0828940:CDS | 45.0% | |
| GATGGAGGAAGAAGGGAAAT+TGG | + | chr5_4:1887049-1887068 | Msa0828940:CDS | 45.0% | |
| ATTGGGGCTGAAAAGGGTTA+GGG | - | chr5_4:1887144-1887163 | None:intergenic | 45.0% | |
| AATTGGGGCTGAAAAGGGTT+AGG | - | chr5_4:1887145-1887164 | None:intergenic | 45.0% | |
| GGTTGGAAAGATTGCACATG+TGG | + | chr5_4:1888723-1888742 | Msa0828940:CDS | 45.0% | |
| CATTCTTGCTCCGTCAATAC+CGG | - | chr5_4:1888922-1888941 | None:intergenic | 45.0% | |
| !! | TGTGGATGTTGTGACTTGCT+AGG | + | chr5_4:1889971-1889990 | Msa0828940:intron | 45.0% |
| CCACAATTTAGTCGAGATCC+GGG | - | chr5_4:1890023-1890042 | None:intergenic | 45.0% | |
| TTTAGAGGTTGTCTGGCGTA+AGG | + | chr5_4:1890159-1890178 | Msa0828940:intron | 45.0% | |
| TTAGAGGTTGTCTGGCGTAA+GGG | + | chr5_4:1890160-1890179 | Msa0828940:intron | 45.0% | |
| ACAACAACACAACAGGTCCA+CGG | - | chr5_4:1890244-1890263 | None:intergenic | 45.0% | |
| TACGGACACAACAACACAAC+AGG | - | chr5_4:1890251-1890270 | None:intergenic | 45.0% | |
| ATGGACTCTGGGTGTATTTG+AGG | + | chr5_4:1890323-1890342 | Msa0828940:intron | 45.0% | |
| TGGACTCTGGGTGTATTTGA+GGG | + | chr5_4:1890324-1890343 | Msa0828940:intron | 45.0% | |
| GGTGGTTTATGGAGGTCTTA+GGG | + | chr5_4:1890345-1890364 | Msa0828940:intron | 45.0% | |
| ATGGAGGTCTTAGGGTCTTT+CGG | + | chr5_4:1890353-1890372 | Msa0828940:intron | 45.0% | |
| CTTAGGGTCTTTCGGTTGTT+TGG | + | chr5_4:1890361-1890380 | Msa0828940:intron | 45.0% | |
| ! | CTTGCTTCTGTCGGATTTTG+GGG | + | chr5_4:1890455-1890474 | Msa0828940:intron | 45.0% |
| ! | TTGCTTCTGTCGGATTTTGG+GGG | + | chr5_4:1890456-1890475 | Msa0828940:intron | 45.0% |
| TTGGGTGTACCGTCTATATG+CGG | + | chr5_4:1890511-1890530 | Msa0828940:intron | 45.0% | |
| ! | CAATAGGTGCCGCATATAGA+CGG | - | chr5_4:1890523-1890542 | None:intergenic | 45.0% |
| TGGGACTCAACATCTCATGT+TGG | + | chr5_4:1891395-1891414 | Msa0828940:intron | 45.0% | |
| TCTCATGTTGGACTCTCCAA+AGG | + | chr5_4:1891407-1891426 | Msa0828940:intron | 45.0% | |
| TCAAGTCCATCAATGGCCTT+TGG | - | chr5_4:1891426-1891445 | None:intergenic | 45.0% | |
| ! | CTCTTTTATCTTGCCATGGC+CGG | + | chr5_4:1891773-1891792 | Msa0828940:CDS | 45.0% |
| ! | TCTTTTATCTTGCCATGGCC+GGG | + | chr5_4:1891774-1891793 | Msa0828940:CDS | 45.0% |
| TAACGAGAGAATGGAGGGAG+AGG | + | chr5_4:1887007-1887026 | Msa0828940:exon | 50.0% | |
| AATGGAGGGAGAGGAGAAGA+AGG | + | chr5_4:1887016-1887035 | Msa0828940:exon | 50.0% | |
| GAAGGAAAAGAAGCCGATGG+AGG | + | chr5_4:1887034-1887053 | Msa0828940:CDS | 50.0% | |
| AAGAAGCCGATGGAGGAAGA+AGG | + | chr5_4:1887041-1887060 | Msa0828940:CDS | 50.0% | |
| AGAAGCCGATGGAGGAAGAA+GGG | + | chr5_4:1887042-1887061 | Msa0828940:CDS | 50.0% | |
| GGCTGAAAAGGGTTAGGGTT+TGG | - | chr5_4:1887139-1887158 | None:intergenic | 50.0% | |
| ATGGGGGTTGGGTTTGCAAT+TGG | + | chr5_4:1887240-1887259 | Msa0828940:intron | 50.0% | |
| CGGGGGTTATCAGTACTCTT+TGG | + | chr5_4:1887699-1887718 | Msa0828940:intron | 50.0% | |
| ! | CTTTGGTTCATGCAGCTGCT+CGG | + | chr5_4:1887716-1887735 | Msa0828940:CDS | 50.0% |
| !! | TCTCTTTGGTGCCTTAGCGA+TGG | + | chr5_4:1888189-1888208 | Msa0828940:intron | 50.0% |
| ! | TTGGTGCCTTAGCGATGGTA+AGG | + | chr5_4:1888194-1888213 | Msa0828940:intron | 50.0% |
| ACAAAAGCCTGGCTGTGAGA+AGG | + | chr5_4:1888893-1888912 | Msa0828940:CDS | 50.0% | |
| CAAAAGCCTGGCTGTGAGAA+GGG | + | chr5_4:1888894-1888913 | Msa0828940:CDS | 50.0% | |
| ! | GAGAAGGGAACCGGTATTGA+CGG | + | chr5_4:1888909-1888928 | Msa0828940:CDS | 50.0% |
| TTTAGTCGAGATCCGGGTTG+TGG | - | chr5_4:1890017-1890036 | None:intergenic | 50.0% | |
| CCCGGATCTCGACTAAATTG+TGG | + | chr5_4:1890020-1890039 | Msa0828940:intron | 50.0% | |
| ! | TCAACGTTTTGTCGTGGCGA+TGG | + | chr5_4:1890049-1890068 | Msa0828940:intron | 50.0% |
| TTTGTCGTGGCGATGGTCTT+TGG | + | chr5_4:1890056-1890075 | Msa0828940:intron | 50.0% | |
| !! | ACTAATGGTGTTGGTGCCCT+AGG | + | chr5_4:1890109-1890128 | Msa0828940:intron | 50.0% |
| !! | CTAATGGTGTTGGTGCCCTA+GGG | + | chr5_4:1890110-1890129 | Msa0828940:intron | 50.0% |
| TTGTGTCCGTATAGCTGCTG+AGG | + | chr5_4:1890260-1890279 | Msa0828940:intron | 50.0% | |
| TGTGTCCGTATAGCTGCTGA+GGG | + | chr5_4:1890261-1890280 | Msa0828940:intron | 50.0% | |
| ACTCTGGGTGTATTTGAGGG+TGG | + | chr5_4:1890327-1890346 | Msa0828940:intron | 50.0% | |
| GGGTGGTTTATGGAGGTCTT+AGG | + | chr5_4:1890344-1890363 | Msa0828940:intron | 50.0% | |
| !! | TCTGTCGGATTTTGGGGGTT+TGG | + | chr5_4:1890461-1890480 | Msa0828940:intron | 50.0% |
| GACTCTCCAAAGGCCATTGA+TGG | + | chr5_4:1891417-1891436 | Msa0828940:intron | 50.0% | |
| ! | CTTTTATCTTGCCATGGCCG+GGG | + | chr5_4:1891775-1891794 | Msa0828940:CDS | 50.0% |
| GAACTGAGCAGTTTCAACCC+CGG | - | chr5_4:1891795-1891814 | None:intergenic | 50.0% | |
| GGGTTGAAACTGCTCAGTTC+AGG | + | chr5_4:1891795-1891814 | Msa0828940:CDS | 50.0% | |
| ! | TTAGCAGCCGCTGATTGGTA+TGG | - | chr5_4:1892166-1892185 | None:intergenic | 50.0% |
| ATCTGTTAGCAGCCGCTGAT+TGG | - | chr5_4:1892171-1892190 | None:intergenic | 50.0% | |
| TCAGCGGCTGCTAACAGATA+AGG | + | chr5_4:1892172-1892191 | Msa0828940:three_prime_UTR | 50.0% | |
| CGGCTGCTAACAGATAAGGA+TGG | + | chr5_4:1892176-1892195 | Msa0828940:three_prime_UTR | 50.0% | |
| GGGGTTGGGTTTGCAATTGG+AGG | + | chr5_4:1887243-1887262 | Msa0828940:intron | 55.0% | |
| GGGGATCTTGACAGAGTTCC+AGG | + | chr5_4:1889057-1889076 | Msa0828940:intron | 55.0% | |
| GTTGTCTGGCGTAAGGGAGA+GGG | + | chr5_4:1890166-1890185 | Msa0828940:intron | 55.0% | |
| TTGTCTGGCGTAAGGGAGAG+GGG | + | chr5_4:1890167-1890186 | Msa0828940:intron | 55.0% | |
| TTTCTCTGCTGCTGTGACCG+TGG | + | chr5_4:1890224-1890243 | Msa0828940:intron | 55.0% | |
| GTGTCCGTATAGCTGCTGAG+GGG | + | chr5_4:1890262-1890281 | Msa0828940:intron | 55.0% | |
| !! | GTCGGATTTTGGGGGTTTGG+AGG | + | chr5_4:1890464-1890483 | Msa0828940:intron | 55.0% |
| TCCATTCCTTGCGTCTTGCG+AGG | + | chr5_4:1890556-1890575 | Msa0828940:intron | 55.0% | |
| CCATTCCTTGCGTCTTGCGA+GGG | + | chr5_4:1890557-1890576 | Msa0828940:intron | 55.0% | |
| !! | GTTGACTTGGGACAGGACAG+TGG | + | chr5_4:1891603-1891622 | Msa0828940:intron | 55.0% |
| CCTGGCTGTGAGAAGGGAAC+CGG | + | chr5_4:1888900-1888919 | Msa0828940:CDS | 60.0% | |
| GGTTGTCTGGCGTAAGGGAG+AGG | + | chr5_4:1890165-1890184 | Msa0828940:intron | 60.0% | |
| TGTCTGGCGTAAGGGAGAGG+GGG | + | chr5_4:1890168-1890187 | Msa0828940:intron | 60.0% | |
| GCTGCCCCTCAGCAGCTATA+CGG | - | chr5_4:1890269-1890288 | None:intergenic | 60.0% | |
| CCCTCGCAAGACGCAAGGAA+TGG | - | chr5_4:1890560-1890579 | None:intergenic | 60.0% | |
| AGCAGTTTCAACCCCGGCCA+TGG | - | chr5_4:1891789-1891808 | None:intergenic | 60.0% | |
| CCGGTTCCCTTCTCACAGCC+AGG | - | chr5_4:1888903-1888922 | None:intergenic | 65.0% | |
| GTCTGGCGTAAGGGAGAGGG+GGG | + | chr5_4:1890169-1890188 | Msa0828940:intron | 65.0% | |
| !! | AGGGAGAGGGGGGCTGCTTT+TGG | + | chr5_4:1890179-1890198 | Msa0828940:intron | 65.0% |
| CGACACCCTCGCAAGACGCA+AGG | - | chr5_4:1890565-1890584 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 1886988 | 1892357 | 1886988 | ID=Msa0828940;Name=Msa0828940 |
| chr5_4 | mRNA | 1886988 | 1892357 | 1886988 | ID=Msa0828940-mRNA-1;Parent=Msa0828940;Name=Msa0828940-mRNA-1;_AED=0.41;_eAED=0.41;_QI=29|0.5|0.71|1|0.66|0.85|7|204|132 |
| chr5_4 | exon | 1886988 | 1887097 | 1886988 | ID=Msa0828940-mRNA-1:exon:526;Parent=Msa0828940-mRNA-1 |
| chr5_4 | exon | 1887712 | 1887737 | 1887712 | ID=Msa0828940-mRNA-1:exon:527;Parent=Msa0828940-mRNA-1 |
| chr5_4 | exon | 1887847 | 1887934 | 1887847 | ID=Msa0828940-mRNA-1:exon:528;Parent=Msa0828940-mRNA-1 |
| chr5_4 | exon | 1888712 | 1888777 | 1888712 | ID=Msa0828940-mRNA-1:exon:529;Parent=Msa0828940-mRNA-1 |
| chr5_4 | exon | 1888879 | 1888952 | 1888879 | ID=Msa0828940-mRNA-1:exon:530;Parent=Msa0828940-mRNA-1 |
| chr5_4 | exon | 1891757 | 1891816 | 1891757 | ID=Msa0828940-mRNA-1:exon:531;Parent=Msa0828940-mRNA-1 |
| chr5_4 | exon | 1892150 | 1892357 | 1892150 | ID=Msa0828940-mRNA-1:exon:532;Parent=Msa0828940-mRNA-1 |
| chr5_4 | five_prime_UTR | 1886988 | 1887016 | 1886988 | ID=Msa0828940-mRNA-1:five_prime_utr;Parent=Msa0828940-mRNA-1 |
| chr5_4 | CDS | 1887017 | 1887097 | 1887017 | ID=Msa0828940-mRNA-1:cds;Parent=Msa0828940-mRNA-1 |
| chr5_4 | CDS | 1887712 | 1887737 | 1887712 | ID=Msa0828940-mRNA-1:cds;Parent=Msa0828940-mRNA-1 |
| chr5_4 | CDS | 1887847 | 1887934 | 1887847 | ID=Msa0828940-mRNA-1:cds;Parent=Msa0828940-mRNA-1 |
| chr5_4 | CDS | 1888712 | 1888777 | 1888712 | ID=Msa0828940-mRNA-1:cds;Parent=Msa0828940-mRNA-1 |
| chr5_4 | CDS | 1888879 | 1888952 | 1888879 | ID=Msa0828940-mRNA-1:cds;Parent=Msa0828940-mRNA-1 |
| chr5_4 | CDS | 1891757 | 1891816 | 1891757 | ID=Msa0828940-mRNA-1:cds;Parent=Msa0828940-mRNA-1 |
| chr5_4 | CDS | 1892150 | 1892153 | 1892150 | ID=Msa0828940-mRNA-1:cds;Parent=Msa0828940-mRNA-1 |
| chr5_4 | three_prime_UTR | 1892154 | 1892357 | 1892154 | ID=Msa0828940-mRNA-1:three_prime_utr;Parent=Msa0828940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
