Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223260 | AFK46804.1 | 91.525 | 59 | 5 | 0 | 1 | 59 | 86 | 144 | 1.42e-27 | 112 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223260 | sp|Q9SRV7|SY131_ARATH | 38.000 | 100 | 51 | 1 | 1 | 100 | 82 | 170 | 1.11e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223260 | I3T2R2 | 91.525 | 59 | 5 | 0 | 1 | 59 | 86 | 144 | 6.79e-28 | 112 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014710 | Msa0223260 | 0.813202 | 2.884609e-51 | -8.615850e-47 |
| Msa0017510 | Msa0223260 | 0.817190 | 3.750676e-52 | -8.615850e-47 |
| Msa0021510 | Msa0223260 | 0.812754 | 3.616040e-51 | -8.615850e-47 |
| Msa0028700 | Msa0223260 | 0.808371 | 3.201282e-50 | -8.615850e-47 |
| Msa0031360 | Msa0223260 | 0.810051 | 1.396706e-50 | -8.615850e-47 |
| Msa0044260 | Msa0223260 | 0.813040 | 3.129378e-51 | -8.615850e-47 |
| Msa0044330 | Msa0223260 | 0.805542 | 1.269609e-49 | -8.615850e-47 |
| Msa0046100 | Msa0223260 | 0.817271 | 3.596150e-52 | -8.615850e-47 |
| Msa0068680 | Msa0223260 | 0.806605 | 7.583608e-50 | -8.615850e-47 |
| Msa0073530 | Msa0223260 | 0.824679 | 7.083746e-54 | -8.615850e-47 |
| Msa0114060 | Msa0223260 | 0.811579 | 6.522818e-51 | -8.615850e-47 |
| Msa0115270 | Msa0223260 | 0.803816 | 2.910305e-49 | -8.615850e-47 |
| Msa0116770 | Msa0223260 | 0.825209 | 5.310353e-54 | -8.615850e-47 |
| Msa0140860 | Msa0223260 | 0.804388 | 2.213040e-49 | -8.615850e-47 |
| Msa0150270 | Msa0223260 | 0.840236 | 9.817735e-58 | -8.615850e-47 |
| Msa0157290 | Msa0223260 | 0.817726 | 2.840106e-52 | -8.615850e-47 |
| Msa0158480 | Msa0223260 | 0.806865 | 6.682262e-50 | -8.615850e-47 |
| Msa0165210 | Msa0223260 | 0.829141 | 6.078422e-55 | -8.615850e-47 |
| Msa0165220 | Msa0223260 | 0.821298 | 4.348298e-53 | -8.615850e-47 |
| Msa0173990 | Msa0223260 | 0.820305 | 7.358877e-53 | -8.615850e-47 |
| Msa0180500 | Msa0223260 | 0.808926 | 2.436224e-50 | -8.615850e-47 |
| Msa0197660 | Msa0223260 | 0.840677 | 7.527528e-58 | -8.615850e-47 |
| Msa0205510 | Msa0223260 | 0.800800 | 1.216149e-48 | -8.615850e-47 |
| Msa0212990 | Msa0223260 | 0.806982 | 6.314345e-50 | -8.615850e-47 |
| Msa0213520 | Msa0223260 | 0.806946 | 6.425458e-50 | -8.615850e-47 |
| Msa0215320 | Msa0223260 | -0.801543 | 8.568298e-49 | -8.615850e-47 |
| Msa0220580 | Msa0223260 | 0.823311 | 1.483080e-53 | -8.615850e-47 |
| Msa0220740 | Msa0223260 | 0.804244 | 2.370280e-49 | -8.615850e-47 |
| Msa0223260 | Msa0233300 | 0.811585 | 6.505034e-51 | -8.615850e-47 |
| Msa0223260 | Msa0239800 | 0.839887 | 1.211003e-57 | -8.615850e-47 |
| Msa0223260 | Msa0258760 | 0.825042 | 5.814679e-54 | -8.615850e-47 |
| Msa0223260 | Msa0262510 | 0.800060 | 1.720297e-48 | -8.615850e-47 |
| Msa0223260 | Msa0277820 | 0.824667 | 7.130438e-54 | -8.615850e-47 |
| Msa0223260 | Msa0278110 | 0.818071 | 2.372807e-52 | -8.615850e-47 |
| Msa0223260 | Msa0285450 | 0.803528 | 3.339434e-49 | -8.615850e-47 |
| Msa0223260 | Msa0288100 | 0.813112 | 3.017957e-51 | -8.615850e-47 |
| Msa0223260 | Msa0298460 | 0.813994 | 1.930942e-51 | -8.615850e-47 |
| Msa0223260 | Msa0317510 | 0.837797 | 4.205101e-57 | -8.615850e-47 |
| Msa0223260 | Msa0319170 | 0.814378 | 1.588401e-51 | -8.615850e-47 |
| Msa0223260 | Msa0323080 | 0.827318 | 1.671488e-54 | -8.615850e-47 |
| Msa0223260 | Msa0323610 | 0.805468 | 1.315662e-49 | -8.615850e-47 |
| Msa0223260 | Msa0326520 | 0.803877 | 2.826920e-49 | -8.615850e-47 |
| Msa0223260 | Msa0330340 | 0.805664 | 1.196691e-49 | -8.615850e-47 |
| Msa0223260 | Msa0340470 | 0.806071 | 9.827129e-50 | -8.615850e-47 |
| Msa0223260 | Msa0344830 | 0.804356 | 2.246890e-49 | -8.615850e-47 |
| Msa0223260 | Msa0344910 | 0.807290 | 5.434522e-50 | -8.615850e-47 |
| Msa0223260 | Msa0344980 | 0.809479 | 1.854345e-50 | -8.615850e-47 |
| Msa0223260 | Msa0345970 | 0.802184 | 6.327726e-49 | -8.615850e-47 |
| Msa0223260 | Msa0350990 | 0.828277 | 9.830105e-55 | -8.615850e-47 |
| Msa0223260 | Msa0351030 | 0.830289 | 3.193533e-55 | -8.615850e-47 |
| Msa0223260 | Msa0351100 | 0.807197 | 5.684885e-50 | -8.615850e-47 |
| Msa0223260 | Msa0355220 | 0.802507 | 5.428314e-49 | -8.615850e-47 |
| Msa0223260 | Msa0356560 | 0.822241 | 2.631211e-53 | -8.615850e-47 |
| Msa0223260 | Msa0359030 | 0.813196 | 2.893280e-51 | -8.615850e-47 |
| Msa0223260 | Msa0379640 | 0.804202 | 2.419175e-49 | -8.615850e-47 |
| Msa0223260 | Msa0398380 | 0.803735 | 3.025050e-49 | -8.615850e-47 |
| Msa0223260 | Msa0401790 | 0.802697 | 4.960756e-49 | -8.615850e-47 |
| Msa0223260 | Msa0402290 | 0.808542 | 2.942049e-50 | -8.615850e-47 |
| Msa0223260 | Msa0408110 | 0.815053 | 1.125808e-51 | -8.615850e-47 |
| Msa0223260 | Msa0414230 | 0.827413 | 1.586238e-54 | -8.615850e-47 |
| Msa0223260 | Msa0416650 | 0.805064 | 1.598756e-49 | -8.615850e-47 |
| Msa0223260 | Msa0424320 | 0.812482 | 4.146253e-51 | -8.615850e-47 |
| Msa0223260 | Msa0432300 | 0.801173 | 1.019963e-48 | -8.615850e-47 |
| Msa0223260 | Msa0453330 | 0.804659 | 1.942703e-49 | -8.615850e-47 |
| Msa0223260 | Msa0479340 | 0.827512 | 1.501580e-54 | -8.615850e-47 |
| Msa0223260 | Msa0484780 | 0.827187 | 1.796721e-54 | -8.615850e-47 |
| Msa0223260 | Msa0491250 | 0.803457 | 3.455024e-49 | -8.615850e-47 |
| Msa0223260 | Msa0495330 | 0.802834 | 4.648625e-49 | -8.615850e-47 |
| Msa0223260 | Msa0509900 | 0.826409 | 2.755686e-54 | -8.615850e-47 |
| Msa0223260 | Msa0512750 | 0.826028 | 3.397045e-54 | -8.615850e-47 |
| Msa0223260 | Msa0517110 | 0.812573 | 3.960895e-51 | -8.615850e-47 |
| Msa0223260 | Msa0523460 | 0.800504 | 1.397369e-48 | -8.615850e-47 |
| Msa0223260 | Msa0523940 | 0.827150 | 1.834302e-54 | -8.615850e-47 |
| Msa0223260 | Msa0529040 | 0.813103 | 3.032645e-51 | -8.615850e-47 |
| Msa0223260 | Msa0532350 | 0.821959 | 3.059664e-53 | -8.615850e-47 |
| Msa0223260 | Msa0543490 | 0.823962 | 1.044432e-53 | -8.615850e-47 |
| Msa0223260 | Msa0545210 | 0.807037 | 6.146555e-50 | -8.615850e-47 |
| Msa0223260 | Msa0545700 | 0.828614 | 8.153093e-55 | -8.615850e-47 |
| Msa0223260 | Msa0558690 | 0.802830 | 4.657997e-49 | -8.615850e-47 |
| Msa0223260 | Msa0562440 | 0.842668 | 2.246921e-58 | -8.615850e-47 |
| Msa0223260 | Msa0585230 | 0.828031 | 1.126874e-54 | -8.615850e-47 |
| Msa0223260 | Msa0593650 | 0.811501 | 6.782540e-51 | -8.615850e-47 |
| Msa0223260 | Msa0604510 | 0.807434 | 5.063878e-50 | -8.615850e-47 |
| Msa0223260 | Msa0616160 | 0.813637 | 2.314594e-51 | -8.615850e-47 |
| Msa0223260 | Msa0623080 | 0.833008 | 6.825734e-56 | -8.615850e-47 |
| Msa0223260 | Msa0626090 | 0.809448 | 1.882466e-50 | -8.615850e-47 |
| Msa0223260 | Msa0656530 | 0.811325 | 7.406409e-51 | -8.615850e-47 |
| Msa0223260 | Msa0657730 | 0.817421 | 3.326745e-52 | -8.615850e-47 |
| Msa0223260 | Msa0663240 | 0.825349 | 4.921786e-54 | -8.615850e-47 |
| Msa0223260 | Msa0664410 | 0.834548 | 2.811859e-56 | -8.615850e-47 |
| Msa0223260 | Msa0672690 | 0.814150 | 1.783736e-51 | -8.615850e-47 |
| Msa0223260 | Msa0682550 | 0.802865 | 4.581152e-49 | -8.615850e-47 |
| Msa0223260 | Msa0688480 | 0.839499 | 1.527452e-57 | -8.615850e-47 |
| Msa0223260 | Msa0693380 | 0.805877 | 1.079607e-49 | -8.615850e-47 |
| Msa0223260 | Msa0701010 | 0.825991 | 3.465112e-54 | -8.615850e-47 |
| Msa0223260 | Msa0702780 | 0.812593 | 3.920769e-51 | -8.615850e-47 |
| Msa0223260 | Msa0703780 | 0.801904 | 7.224933e-49 | -8.615850e-47 |
| Msa0223260 | Msa0731940 | 0.803423 | 3.511277e-49 | -8.615850e-47 |
| Msa0223260 | Msa0743720 | 0.818002 | 2.460325e-52 | -8.615850e-47 |
| Msa0223260 | Msa0753720 | 0.819629 | 1.050718e-52 | -8.615850e-47 |
| Msa0223260 | Msa0760130 | 0.836028 | 1.189376e-56 | -8.615850e-47 |
| Msa0223260 | Msa0762360 | 0.803663 | 3.131185e-49 | -8.615850e-47 |
| Msa0223260 | Msa0766630 | 0.834162 | 3.515236e-56 | -8.615850e-47 |
| Msa0223260 | Msa0768290 | 0.801483 | 8.813862e-49 | -8.615850e-47 |
| Msa0223260 | Msa0787470 | 0.802283 | 6.038711e-49 | -8.615850e-47 |
| Msa0223260 | Msa0797170 | 0.812818 | 3.501054e-51 | -8.615850e-47 |
| Msa0223260 | Msa0810220 | 0.810662 | 1.031236e-50 | -8.615850e-47 |
| Msa0223260 | Msa0820850 | 0.822766 | 1.987022e-53 | -8.615850e-47 |
| Msa0223260 | Msa0828940 | 0.859485 | 4.004449e-63 | -8.615850e-47 |
| Msa0223260 | Msa0842650 | 0.805882 | 1.076973e-49 | -8.615850e-47 |
| Msa0223260 | Msa0849030 | 0.804668 | 1.934324e-49 | -8.615850e-47 |
| Msa0223260 | Msa0860410 | 0.801650 | 8.147573e-49 | -8.615850e-47 |
| Msa0223260 | Msa0861130 | 0.826028 | 3.395639e-54 | -8.615850e-47 |
| Msa0223260 | Msa0877250 | 0.818193 | 2.226770e-52 | -8.615850e-47 |
| Msa0223260 | Msa0880140 | 0.814010 | 1.914925e-51 | -8.615850e-47 |
| Msa0223260 | Msa0885280 | 0.804654 | 1.947345e-49 | -8.615850e-47 |
| Msa0223260 | Msa0892080 | 0.803455 | 3.458479e-49 | -8.615850e-47 |
| Msa0223260 | Msa0897880 | 0.820945 | 5.245255e-53 | -8.615850e-47 |
| Msa0223260 | Msa0899450 | 0.804138 | 2.494942e-49 | -8.615850e-47 |
| Msa0223260 | Msa0907070 | 0.828246 | 1.000139e-54 | -8.615850e-47 |
| Msa0223260 | Msa0907260 | 0.808511 | 2.988499e-50 | -8.615850e-47 |
| Msa0223260 | Msa0907950 | 0.808951 | 2.406358e-50 | -8.615850e-47 |
| Msa0223260 | Msa0909120 | 0.806080 | 9.783817e-50 | -8.615850e-47 |
| Msa0223260 | Msa0918700 | 0.808337 | 3.254162e-50 | -8.615850e-47 |
| Msa0223260 | Msa0922410 | 0.805351 | 1.392382e-49 | -8.615850e-47 |
| Msa0223260 | Msa0924310 | 0.800185 | 1.622857e-48 | -8.615850e-47 |
| Msa0223260 | Msa0925290 | 0.810540 | 1.095886e-50 | -8.615850e-47 |
| Msa0223260 | Msa0927380 | 0.823216 | 1.560687e-53 | -8.615850e-47 |
| Msa0223260 | Msa0931520 | 0.814766 | 1.303446e-51 | -8.615850e-47 |
| Msa0223260 | Msa0935910 | 0.803064 | 4.165951e-49 | -8.615850e-47 |
| Msa0223260 | Msa0938220 | 0.803000 | 4.296039e-49 | -8.615850e-47 |
| Msa0223260 | Msa0942200 | 0.810519 | 1.106965e-50 | -8.615850e-47 |
| Msa0223260 | Msa0947660 | 0.802050 | 6.741837e-49 | -8.615850e-47 |
| Msa0223260 | Msa0953120 | 0.818847 | 1.582654e-52 | -8.615850e-47 |
| Msa0223260 | Msa0954130 | 0.810560 | 1.084991e-50 | -8.615850e-47 |
| Msa0223260 | Msa0954550 | 0.804887 | 1.740824e-49 | -8.615850e-47 |
| Msa0223260 | Msa0954910 | 0.803719 | 3.047983e-49 | -8.615850e-47 |
| Msa0223260 | Msa0956270 | 0.800605 | 1.332873e-48 | -8.615850e-47 |
| Msa0223260 | Msa0964900 | 0.821636 | 3.633255e-53 | -8.615850e-47 |
| Msa0223260 | Msa0969520 | 0.813492 | 2.491149e-51 | -8.615850e-47 |
| Msa0223260 | Msa0975220 | 0.825518 | 4.487589e-54 | -8.615850e-47 |
| Msa0223260 | Msa0980090 | 0.829611 | 4.671904e-55 | -8.615850e-47 |
| Msa0223260 | Msa0994730 | 0.806348 | 8.591473e-50 | -8.615850e-47 |
| Msa0223260 | Msa1000900 | 0.816450 | 5.495065e-52 | -8.615850e-47 |
| Msa0223260 | Msa1014540 | 0.829778 | 4.255032e-55 | -8.615850e-47 |
| Msa0223260 | Msa1027290 | 0.832956 | 7.030615e-56 | -8.615850e-47 |
| Msa0223260 | Msa1030970 | 0.852298 | 5.059455e-61 | -8.615850e-47 |
| Msa0223260 | Msa1035300 | 0.801411 | 9.121008e-49 | -8.615850e-47 |
| Msa0223260 | Msa1043920 | 0.804819 | 1.798590e-49 | -8.615850e-47 |
| Msa0223260 | Msa1045200 | 0.822141 | 2.776568e-53 | -8.615850e-47 |
| Msa0223260 | Msa1051350 | 0.801656 | 8.123040e-49 | -8.615850e-47 |
| Msa0223260 | Msa1052330 | 0.806041 | 9.974616e-50 | -8.615850e-47 |
| Msa0223260 | Msa1052830 | 0.816725 | 4.768661e-52 | -8.615850e-47 |
| Msa0223260 | Msa1070010 | 0.819780 | 9.704412e-53 | -8.615850e-47 |
| Msa0223260 | Msa1075220 | -0.824093 | 9.729204e-54 | -8.615850e-47 |
| Msa0223260 | Msa1075540 | 0.818640 | 1.763721e-52 | -8.615850e-47 |
| Msa0223260 | Msa1075650 | 0.803074 | 4.146737e-49 | -8.615850e-47 |
| Msa0223260 | Msa1082500 | 0.844727 | 6.321732e-59 | -8.615850e-47 |
| Msa0223260 | Msa1085740 | 0.811208 | 7.854183e-51 | -8.615850e-47 |
| Msa0223260 | Msa1090260 | 0.803012 | 4.270174e-49 | -8.615850e-47 |
| Msa0223260 | Msa1116130 | -0.804277 | 2.333711e-49 | -8.615850e-47 |
| Msa0223260 | Msa1134450 | 0.813308 | 2.734188e-51 | -8.615850e-47 |
| Msa0223260 | Msa1137570 | 0.825008 | 5.923458e-54 | -8.615850e-47 |
| Msa0223260 | Msa1139000 | -0.806358 | 8.552060e-50 | -8.615850e-47 |
| Msa0223260 | Msa1142020 | 0.817017 | 4.100532e-52 | -8.615850e-47 |
| Msa0223260 | Msa1153410 | 0.861850 | 7.676342e-64 | -8.615850e-47 |
| Msa0223260 | Msa1156020 | 0.821598 | 3.707902e-53 | -8.615850e-47 |
| Msa0223260 | Msa1162550 | -0.816153 | 6.403209e-52 | -8.615850e-47 |
| Msa0223260 | Msa1174040 | 0.828099 | 1.084912e-54 | -8.615850e-47 |
| Msa0223260 | Msa1174910 | 0.818494 | 1.904119e-52 | -8.615850e-47 |
| Msa0223260 | Msa1181550 | 0.805808 | 1.116387e-49 | -8.615850e-47 |
| Msa0223260 | Msa1184420 | 0.813166 | 2.937387e-51 | -8.615850e-47 |
| Msa0223260 | Msa1199220 | 0.810429 | 1.158089e-50 | -8.615850e-47 |
| Msa0223260 | Msa1229600 | 0.814686 | 1.357936e-51 | -8.615850e-47 |
| Msa0223260 | Msa1233500 | 0.804208 | 2.411799e-49 | -8.615850e-47 |
| Msa0223260 | Msa1233890 | 0.803641 | 3.164338e-49 | -8.615850e-47 |
| Msa0223260 | Msa1238470 | 0.804135 | 2.498386e-49 | -8.615850e-47 |
| Msa0223260 | Msa1238930 | 0.828412 | 9.119659e-55 | -8.615850e-47 |
| Msa0223260 | Msa1239530 | 0.811278 | 7.583963e-51 | -8.615850e-47 |
| Msa0223260 | Msa1242220 | 0.805075 | 1.590320e-49 | -8.615850e-47 |
| Msa0223260 | Msa1244250 | 0.830583 | 2.706965e-55 | -8.615850e-47 |
| Msa0223260 | Msa1246510 | 0.809329 | 1.996640e-50 | -8.615850e-47 |
| Msa0223260 | Msa1249490 | 0.835780 | 1.375007e-56 | -8.615850e-47 |
| Msa0223260 | Msa1273920 | 0.812271 | 4.611258e-51 | -8.615850e-47 |
| Msa0223260 | Msa1276890 | 0.820435 | 6.869284e-53 | -8.615850e-47 |
| Msa0223260 | Msa1277660 | 0.808301 | 3.312160e-50 | -8.615850e-47 |
| Msa0223260 | Msa1283860 | 0.812556 | 3.995179e-51 | -8.615850e-47 |
| Msa0223260 | Msa1284680 | 0.841886 | 3.619099e-58 | -8.615850e-47 |
| Msa0223260 | Msa1292770 | 0.806653 | 7.408472e-50 | -8.615850e-47 |
| Msa0223260 | Msa1296280 | 0.800605 | 1.332649e-48 | -8.615850e-47 |
| Msa0223260 | Msa1306760 | 0.820368 | 7.116048e-53 | -8.615850e-47 |
| Msa0223260 | Msa1308620 | 0.821459 | 3.992329e-53 | -8.615850e-47 |
| Msa0223260 | Msa1310210 | 0.806988 | 6.294135e-50 | -8.615850e-47 |
| Msa0223260 | Msa1314170 | 0.801585 | 8.399522e-49 | -8.615850e-47 |
| Msa0223260 | Msa1314340 | 0.807677 | 4.497641e-50 | -8.615850e-47 |
| Msa0223260 | Msa1319800 | 0.819992 | 8.679841e-53 | -8.615850e-47 |
| Msa0223260 | Msa1322890 | 0.826338 | 2.866215e-54 | -8.615850e-47 |
| Msa0223260 | Msa1331000 | 0.800139 | 1.658251e-48 | -8.615850e-47 |
| Msa0223260 | Msa1342840 | 0.801370 | 9.298062e-49 | -8.615850e-47 |
| Msa0223260 | Msa1346370 | 0.802534 | 5.360700e-49 | -8.615850e-47 |
| Msa0223260 | Msa1348950 | 0.818995 | 1.464994e-52 | -8.615850e-47 |
| Msa0223260 | Msa1353470 | 0.809151 | 2.180322e-50 | -8.615850e-47 |
| Msa0223260 | Msa1359040 | 0.806022 | 1.006466e-49 | -8.615850e-47 |
| Msa0223260 | Msa1362880 | 0.824767 | 6.752721e-54 | -8.615850e-47 |
| Msa0223260 | Msa1372760 | 0.813242 | 2.826645e-51 | -8.615850e-47 |
| Msa0223260 | Msa1393410 | 0.818126 | 2.305923e-52 | -8.615850e-47 |
| Msa0223260 | Msa1395660 | 0.802040 | 6.776160e-49 | -8.615850e-47 |
| Msa0223260 | Msa1395900 | 0.810665 | 1.029775e-50 | -8.615850e-47 |
| Msa0223260 | Msa1402730 | 0.832819 | 7.602081e-56 | -8.615850e-47 |
| Msa0223260 | Msa1403480 | 0.802489 | 5.474731e-49 | -8.615850e-47 |
| Msa0223260 | Msa1411020 | 0.829571 | 4.778374e-55 | -8.615850e-47 |
| Msa0223260 | Msa1415640 | 0.800248 | 1.575756e-48 | -8.615850e-47 |
| Msa0223260 | Msa1420490 | 0.806309 | 8.756575e-50 | -8.615850e-47 |
| Msa0223260 | Msa1423390 | 0.805144 | 1.538017e-49 | -8.615850e-47 |
| Msa0223260 | Msa1424290 | 0.826502 | 2.619826e-54 | -8.615850e-47 |
| Msa0223260 | Msa1424680 | 0.807121 | 5.899200e-50 | -8.615850e-47 |
| Msa0223260 | Msa1427230 | 0.817124 | 3.881003e-52 | -8.615850e-47 |
| Msa0223260 | Msa1430680 | 0.800285 | 1.548628e-48 | -8.615850e-47 |
| Msa0223260 | Msa1434350 | 0.827411 | 1.587903e-54 | -8.615850e-47 |
| Msa0223260 | Msa1435420 | 0.817374 | 3.409370e-52 | -8.615850e-47 |
| Msa0223260 | Msa1439320 | 0.834611 | 2.712031e-56 | -8.615850e-47 |
| Msa0223260 | Msa1440370 | 0.809039 | 2.304000e-50 | -8.615850e-47 |
| Msa0223260 | Msa1440810 | 0.810779 | 9.726967e-51 | -8.615850e-47 |
| Msa0223260 | Msa1450760 | 0.806725 | 7.156393e-50 | -8.615850e-47 |
| Msa0223260 | Msa1451620 | -0.805731 | 1.158477e-49 | -8.615850e-47 |
| Msa0223260 | Msa1460050 | 0.803821 | 2.902424e-49 | -8.615850e-47 |
| Msa0223260 | Msa1460830 | 0.806411 | 8.334510e-50 | -8.615850e-47 |
| Msa0223260 | Msa1466540 | 0.815841 | 7.519521e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223260 | MtrunA17_Chr2g0322801 | 91.525 | 59 | 5 | 0 | 1 | 59 | 86 | 144 | 3.27e-30 | 112 |
| Msa0223260 | MtrunA17_Chr8g0338451 | 69.388 | 49 | 14 | 1 | 123 | 170 | 607 | 655 | 7.60e-14 | 68.6 |
| Msa0223260 | MtrunA17_Chr6g0471951 | 69.388 | 49 | 14 | 1 | 123 | 170 | 259 | 307 | 3.12e-13 | 66.6 |
| Msa0223260 | MtrunA17_Chr6g0461261 | 35.000 | 100 | 54 | 1 | 1 | 100 | 81 | 169 | 2.74e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223260 | AT3G03800.2 | 38.000 | 100 | 51 | 1 | 1 | 100 | 82 | 170 | 1.18e-14 | 70.5 |
| Msa0223260 | AT3G03800.1 | 38.000 | 100 | 51 | 1 | 1 | 100 | 82 | 170 | 1.18e-14 | 70.5 |
| Msa0223260 | AT5G08080.5 | 57.143 | 49 | 21 | 0 | 1 | 49 | 81 | 129 | 6.45e-13 | 64.7 |
| Msa0223260 | AT5G08080.2 | 57.143 | 49 | 21 | 0 | 1 | 49 | 81 | 129 | 6.45e-13 | 64.7 |
| Msa0223260 | AT5G08080.1 | 57.143 | 49 | 21 | 0 | 1 | 49 | 81 | 129 | 9.85e-13 | 65.1 |
| Msa0223260 | AT5G08080.4 | 57.143 | 49 | 21 | 0 | 1 | 49 | 81 | 129 | 9.85e-13 | 65.1 |
| Msa0223260 | AT5G08080.3 | 57.143 | 49 | 21 | 0 | 1 | 49 | 92 | 140 | 1.02e-12 | 65.1 |
Find 47 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTTGAGTTGTTCTCATCT+TGG | 0.296449 | 2_1:-72799690 | None:intergenic |
| TTGCTGTTGGTTTAACTGTT+TGG | 0.304654 | 2_1:+72798457 | Msa0223260:CDS |
| GTCATTGACCCATGATTTGA+TGG | 0.313345 | 2_1:-72799773 | None:intergenic |
| CCATTGATGGACTTGAGATA+TGG | 0.314818 | 2_1:+72799746 | Msa0223260:CDS |
| GGGGATCTTGACAGAGTTCC+AGG | 0.316919 | 2_1:+72797321 | Msa0223260:CDS |
| ATTTAATGTGTCTGATACTC+TGG | 0.365294 | 2_1:-72799840 | None:intergenic |
| GTGGAGAGAAGAGTTATTAC+AGG | 0.369427 | 2_1:+72797462 | Msa0223260:CDS |
| CAATGACTTAAAAGATGTTT+AGG | 0.377845 | 2_1:+72799789 | Msa0223260:CDS |
| CAAGATGAGAACAACTCAAC+TGG | 0.392091 | 2_1:+72799691 | Msa0223260:CDS |
| GACTCTCCAAAGGCCATTGA+TGG | 0.397359 | 2_1:+72799733 | Msa0223260:CDS |
| TTTGGAGGTTGTCTGGCATA+AGG | 0.397800 | 2_1:+72798475 | Msa0223260:CDS |
| TTAACTGTTTGGAGGTTGTC+TGG | 0.404618 | 2_1:+72798468 | Msa0223260:CDS |
| CATTGATGGACTTGAGATAT+GGG | 0.415248 | 2_1:+72799747 | Msa0223260:CDS |
| TTGGAGGTTGTCTGGCATAA+GGG | 0.438769 | 2_1:+72798476 | Msa0223260:CDS |
| TCAAGTCCATCAATGGCCTT+TGG | 0.439526 | 2_1:-72799739 | None:intergenic |
| GTCTGGCATAAGGGAGAGGG+GGG | 0.453338 | 2_1:+72798485 | Msa0223260:CDS |
| GGTTGTCTGGCATAAGGGAG+AGG | 0.460846 | 2_1:+72798481 | Msa0223260:CDS |
| CATTCTTGCTCCGTCAATAC+CGG | 0.466523 | 2_1:-72797183 | None:intergenic |
| ACAATTGTCTTGGATGGAAA+AGG | 0.469987 | 2_1:+72796954 | None:intergenic |
| TACAGACACAACAACACAAC+AGG | 0.482331 | 2_1:-72798564 | None:intergenic |
| GAAAAGGATATTGATGAGGT+TGG | 0.486934 | 2_1:+72796970 | Msa0223260:CDS |
| CTGTTGGTTTAACTGTTTGG+AGG | 0.489137 | 2_1:+72798460 | Msa0223260:CDS |
| TATGGGTTTCCATCAAATCA+TGG | 0.491136 | 2_1:+72799764 | Msa0223260:CDS |
| AGATGAATATCGTGAGGTTG+TGG | 0.491519 | 2_1:+72797443 | Msa0223260:CDS |
| CCATATCTCAAGTCCATCAA+TGG | 0.492238 | 2_1:-72799746 | None:intergenic |
| CAAAAGCCTGGCTGTGAGAA+GGG | 0.499149 | 2_1:+72797158 | Msa0223260:CDS |
| TGTCTGGCATAAGGGAGAGG+GGG | 0.500719 | 2_1:+72798484 | Msa0223260:CDS |
| CCGGTTCCCTTCTCACAGCC+AGG | 0.501105 | 2_1:-72797164 | None:intergenic |
| ATATTTCACATATTATACTC+TGG | 0.501147 | 2_1:-72799812 | None:intergenic |
| CCTGGCTGTGAGAAGGGAAC+CGG | 0.506291 | 2_1:+72797164 | Msa0223260:CDS |
| TTTCTCTGCTGCTGTGACCG+TGG | 0.515852 | 2_1:+72798540 | Msa0223260:CDS |
| GAGAAGGGAACCGGTATTGA+CGG | 0.524006 | 2_1:+72797173 | Msa0223260:CDS |
| TTGTCTGGCATAAGGGAGAG+GGG | 0.540555 | 2_1:+72798483 | Msa0223260:CDS |
| GTTGTCTGGCATAAGGGAGA+GGG | 0.544012 | 2_1:+72798482 | Msa0223260:CDS |
| CTAAACAATGGACAAAAGCC+TGG | 0.545354 | 2_1:+72797146 | Msa0223260:CDS |
| ATGTTTCAAAACAACATACC+TGG | 0.557954 | 2_1:-72797339 | None:intergenic |
| ATGGGTTTCCATCAAATCAT+GGG | 0.572571 | 2_1:+72799765 | Msa0223260:CDS |
| ACAAAAGCCTGGCTGTGAGA+AGG | 0.573160 | 2_1:+72797157 | Msa0223260:CDS |
| TGGGACTCAACATCTCATGT+TGG | 0.604260 | 2_1:+72799711 | Msa0223260:CDS |
| TCTCATGTTGGACTCTCCAA+AGG | 0.622034 | 2_1:+72799723 | Msa0223260:CDS |
| TTTATGCAGAATCTAAACAA+TGG | 0.634865 | 2_1:+72797134 | Msa0223260:intron |
| AAGATGAGAACAACTCAACT+GGG | 0.640277 | 2_1:+72799692 | Msa0223260:CDS |
| CTTGATATATTGCAGATGCA+TGG | 0.640775 | 2_1:+72799660 | Msa0223260:intron |
| ACAACAACACAACAGGTCCA+CGG | 0.654001 | 2_1:-72798557 | None:intergenic |
| GATGGAAAAGGATATTGATG+AGG | 0.655016 | 2_1:+72796966 | None:intergenic |
| GGTTGGAAAGATTGCACATG+TGG | 0.657598 | 2_1:+72796987 | Msa0223260:CDS |
| AATACAAGATGAATATCGTG+AGG | 0.666598 | 2_1:+72797437 | Msa0223260:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTTATATAGATTTCAAATA+TGG | + | chr2_1:72797085-72797104 | Msa0223260:intron | 15.0% |
| !!! | TTTACATTGATTGATTTTAT+TGG | + | chr2_1:72797841-72797860 | Msa0223260:intron | 15.0% |
| !!! | TTACATTGATTGATTTTATT+GGG | + | chr2_1:72797842-72797861 | Msa0223260:intron | 15.0% |
| !!! | TTACATTGATTGATTTTATT+GGG | + | chr2_1:72797842-72797861 | Msa0223260:intron | 15.0% |
| !!! | CATTTGCATTTTTTTTTAAA+GGG | - | chr2_1:72798918-72798937 | None:intergenic | 15.0% |
| !!! | CTTTAAAAAAAAATGCAAAT+GGG | + | chr2_1:72798917-72798936 | Msa0223260:intron | 15.0% |
| !! | TTTAAAAAAAAATGCAAATG+GGG | + | chr2_1:72798918-72798937 | Msa0223260:intron | 15.0% |
| !!! | GTTTTTTCTGATTATTTTAA+AGG | + | chr2_1:72799160-72799179 | Msa0223260:intron | 15.0% |
| !!! | ACTTTGTATATCATGAATTT+TGG | - | chr2_1:72797575-72797594 | None:intergenic | 20.0% |
| !!! | CTTACATTGATTGATTTTAT+TGG | + | chr2_1:72797890-72797909 | Msa0223260:intron | 20.0% |
| !! | AGAATTTAATACATAGAGAA+GGG | - | chr2_1:72798084-72798103 | None:intergenic | 20.0% |
| !! | TAGAATTTAATACATAGAGA+AGG | - | chr2_1:72798085-72798104 | None:intergenic | 20.0% |
| !! | CTTCTGTTTAATAATTTCAA+GGG | + | chr2_1:72798263-72798282 | Msa0223260:intron | 20.0% |
| !!! | TTCTTTTTCATTTTCTGTTA+TGG | + | chr2_1:72798620-72798639 | Msa0223260:intron | 20.0% |
| !!! | CCATTTGCATTTTTTTTTAA+AGG | - | chr2_1:72798919-72798938 | None:intergenic | 20.0% |
| !!! | CCTTTAAAAAAAAATGCAAA+TGG | + | chr2_1:72798916-72798935 | Msa0223260:intron | 20.0% |
| !!! | TCTGAATAATTGTTTTTGAT+CGG | + | chr2_1:72799119-72799138 | Msa0223260:intron | 20.0% |
| !! | AAACATAGATTTACATTCAA+AGG | - | chr2_1:72799284-72799303 | None:intergenic | 20.0% |
| !!! | TTCATGATTTGATTTAGTTA+TGG | + | chr2_1:72799429-72799448 | Msa0223260:intron | 20.0% |
| !! | AAAAATGTAATCAGCTATTT+AGG | + | chr2_1:72799500-72799519 | Msa0223260:intron | 20.0% |
| !! | ATATTTCACATATTATACTC+TGG | - | chr2_1:72799815-72799834 | None:intergenic | 20.0% |
| ! | ATGGATAGAAAATAGTTAAC+CGG | + | chr2_1:72797104-72797123 | Msa0223260:intron | 25.0% |
| ! | TTTATGCAGAATCTAAACAA+TGG | + | chr2_1:72797134-72797153 | Msa0223260:intron | 25.0% |
| ! | AACACAGTTAACTTTATCAA+GGG | - | chr2_1:72797503-72797522 | None:intergenic | 25.0% |
| ! | TAAAATTCATGATATGCACA+AGG | + | chr2_1:72797624-72797643 | Msa0223260:intron | 25.0% |
| ! | CATTTCAAAATACATGCAAA+TGG | - | chr2_1:72797672-72797691 | None:intergenic | 25.0% |
| !! | AAGGTTTGAACATGTAATTT+TGG | + | chr2_1:72797803-72797822 | Msa0223260:intron | 25.0% |
| ! | CAATGTAAGATACAACAAAA+GGG | - | chr2_1:72797879-72797898 | None:intergenic | 25.0% |
| ! | TCAATGTAAGATACAACAAA+AGG | - | chr2_1:72797880-72797899 | None:intergenic | 25.0% |
| ! | AGAAGTTCGATAAATGATAA+TGG | + | chr2_1:72797996-72798015 | Msa0223260:intron | 25.0% |
| ! | GCTTCTGTTTAATAATTTCA+AGG | + | chr2_1:72798262-72798281 | Msa0223260:intron | 25.0% |
| ! | TTTAATAATTTCAAGGGATG+TGG | + | chr2_1:72798269-72798288 | Msa0223260:intron | 25.0% |
| ! | GAAACAAAAGACTCAAAAAA+CGG | - | chr2_1:72799050-72799069 | None:intergenic | 25.0% |
| !!! | AAAGGTTTGATTTTCCTTTT+TGG | + | chr2_1:72799178-72799197 | Msa0223260:intron | 25.0% |
| ! | AGCAAAAAAACAAACCAAAA+AGG | - | chr2_1:72799195-72799214 | None:intergenic | 25.0% |
| !! | ATCATTCATGATTTTTGTAG+TGG | + | chr2_1:72799349-72799368 | Msa0223260:intron | 25.0% |
| ! | AGATAATTTGAATCATACCT+TGG | + | chr2_1:72799405-72799424 | Msa0223260:intron | 25.0% |
| ! | TAAATCAAATCATGAAACCA+AGG | - | chr2_1:72799425-72799444 | None:intergenic | 25.0% |
| ! | ATCTCTAATGTGTATCTATT+CGG | - | chr2_1:72799570-72799589 | None:intergenic | 25.0% |
| ! | CAATGACTTAAAAGATGTTT+AGG | + | chr2_1:72799789-72799808 | Msa0223260:CDS | 25.0% |
| TGGATAGAAAATAGTTAACC+GGG | + | chr2_1:72797105-72797124 | Msa0223260:intron | 30.0% | |
| ATTCTGCATAAAACATATCC+CGG | - | chr2_1:72797126-72797145 | None:intergenic | 30.0% | |
| AGTTCCTTGACTAAAAAGTT+CGG | + | chr2_1:72797300-72797319 | Msa0223260:intron | 30.0% | |
| ATGTTTCAAAACAACATACC+TGG | - | chr2_1:72797342-72797361 | None:intergenic | 30.0% | |
| TGAGAAGATAGACATAAACT+TGG | - | chr2_1:72797386-72797405 | None:intergenic | 30.0% | |
| AATACAAGATGAATATCGTG+AGG | + | chr2_1:72797437-72797456 | Msa0223260:CDS | 30.0% | |
| ACACAGTTAACTTTATCAAG+GGG | - | chr2_1:72797502-72797521 | None:intergenic | 30.0% | |
| CAACACAGTTAACTTTATCA+AGG | - | chr2_1:72797504-72797523 | None:intergenic | 30.0% | |
| TGAAATGTAAACTTCGAGAA+AGG | + | chr2_1:72797685-72797704 | Msa0223260:intron | 30.0% | |
| ATCTACTTTGATATGACTCA+TGG | + | chr2_1:72797757-72797776 | Msa0223260:intron | 30.0% | |
| ATTACATGTTCAAACCTTTG+TGG | - | chr2_1:72797801-72797820 | None:intergenic | 30.0% | |
| TGCACTTAGTAACAACAAAA+GGG | - | chr2_1:72797928-72797947 | None:intergenic | 30.0% | |
| !! | CAAAGTATATTGATGATGAG+TGG | + | chr2_1:72798021-72798040 | Msa0223260:intron | 30.0% |
| TTCTAAACACCCAAACAAAT+AGG | + | chr2_1:72798056-72798075 | Msa0223260:intron | 30.0% | |
| GTTTCAGTTACTTGCATAAT+AGG | + | chr2_1:72798172-72798191 | Msa0223260:intron | 30.0% | |
| !! | TTTGTGATTAGTTTGAGCTA+TGG | + | chr2_1:72798705-72798724 | Msa0223260:intron | 30.0% |
| !!! | TTTAGCTTTTGCTTCTGTTA+TGG | + | chr2_1:72798803-72798822 | Msa0223260:intron | 30.0% |
| !! | TTAGCTTTTGCTTCTGTTAT+GGG | + | chr2_1:72798804-72798823 | Msa0223260:intron | 30.0% |
| ACCATTGATAAGCTAGAAAA+CGG | - | chr2_1:72798971-72798990 | None:intergenic | 30.0% | |
| !!! | TTTTTGATCGGTGTTGATAT+TGG | + | chr2_1:72799131-72799150 | Msa0223260:intron | 30.0% |
| !!! | GTTTGTTTTTTTGCTGATTC+TGG | + | chr2_1:72799200-72799219 | Msa0223260:intron | 30.0% |
| !!! | ATGATTTTTGTAGTGGACAA+AGG | + | chr2_1:72799356-72799375 | Msa0223260:intron | 30.0% |
| !! | GAATAACCAACCACTTTTAT+TGG | - | chr2_1:72799470-72799489 | None:intergenic | 30.0% |
| ! | ATTAGAGATTCATGTCGATT+GGG | + | chr2_1:72799581-72799600 | Msa0223260:intron | 30.0% |
| ATTTAATGTGTCTGATACTC+TGG | - | chr2_1:72799843-72799862 | None:intergenic | 30.0% | |
| GAAAAGGATATTGATGAGGT+TGG | + | chr2_1:72796970-72796989 | Msa0223260:CDS | 35.0% | |
| GTTCCTTGACTAAAAAGTTC+GGG | + | chr2_1:72797301-72797320 | Msa0223260:intron | 35.0% | |
| TTCCTTGACTAAAAAGTTCG+GGG | + | chr2_1:72797302-72797321 | Msa0223260:CDS | 35.0% | |
| AAGTTAACTGTGTTGCACTA+CGG | + | chr2_1:72797509-72797528 | Msa0223260:intron | 35.0% | |
| ! | GTGGTACTTTAGAAATTTGC+TGG | + | chr2_1:72797531-72797550 | Msa0223260:intron | 35.0% |
| ! | AAGGAAAGTTGAGATCCTTT+TGG | + | chr2_1:72797710-72797729 | Msa0223260:intron | 35.0% |
| ! | CATGGAATGAGATAGCTTTT+TGG | + | chr2_1:72797775-72797794 | Msa0223260:intron | 35.0% |
| CTGCACTTAGTAACAACAAA+AGG | - | chr2_1:72797929-72797948 | None:intergenic | 35.0% | |
| !!! | CTTTTGTTGTTACTAAGTGC+AGG | + | chr2_1:72797927-72797946 | Msa0223260:intron | 35.0% |
| AGAAGGGATCCTATTTGTTT+GGG | - | chr2_1:72798068-72798087 | None:intergenic | 35.0% | |
| ! | ATGATATCAACGTTTTGTCG+TGG | + | chr2_1:72798359-72798378 | Msa0223260:intron | 35.0% |
| ! | GTCTGTTTTACTAATGGTGT+TGG | + | chr2_1:72798416-72798435 | Msa0223260:intron | 35.0% |
| !! | TTGCTGTTGGTTTAACTGTT+TGG | + | chr2_1:72798457-72798476 | Msa0223260:CDS | 35.0% |
| ! | TCATTTTCTGTTATGGACTC+TGG | + | chr2_1:72798627-72798646 | Msa0223260:intron | 35.0% |
| ! | CATTTTCTGTTATGGACTCT+GGG | + | chr2_1:72798628-72798647 | Msa0223260:intron | 35.0% |
| !! | TTAGGGTTTTTCGGTTGTTT+GGG | + | chr2_1:72798678-72798697 | Msa0223260:intron | 35.0% |
| ! | TGAGCTATGGTTGTGTATTT+TGG | + | chr2_1:72798718-72798737 | Msa0223260:intron | 35.0% |
| ! | TTTTGCTTCTGTTATGGGTT+GGG | + | chr2_1:72798809-72798828 | Msa0223260:intron | 35.0% |
| ! | GGACGAAAGAAAAGTACAAT+AGG | - | chr2_1:72798855-72798874 | None:intergenic | 35.0% |
| !!! | TCCGTTTTCTAGCTTATCAA+TGG | + | chr2_1:72798967-72798986 | Msa0223260:intron | 35.0% |
| !!! | TTTCTCTGTTTCTGCGATTT+TGG | + | chr2_1:72799066-72799085 | Msa0223260:intron | 35.0% |
| TTGGCGATAGATTTCATGTT+AGG | + | chr2_1:72799085-72799104 | Msa0223260:intron | 35.0% | |
| TGGCGATAGATTTCATGTTA+GGG | + | chr2_1:72799086-72799105 | Msa0223260:intron | 35.0% | |
| ACATTCAAAGGACTCAAGTT+AGG | - | chr2_1:72799272-72799291 | None:intergenic | 35.0% | |
| TGTAACACTGCCAATAAAAG+TGG | + | chr2_1:72799457-72799476 | Msa0223260:intron | 35.0% | |
| CATTAGAGATTCATGTCGAT+TGG | + | chr2_1:72799580-72799599 | Msa0223260:intron | 35.0% | |
| CTTGATATATTGCAGATGCA+TGG | + | chr2_1:72799660-72799679 | Msa0223260:intron | 35.0% | |
| AAGATGAGAACAACTCAACT+GGG | + | chr2_1:72799692-72799711 | Msa0223260:CDS | 35.0% | |
| !! | CATTGATGGACTTGAGATAT+GGG | + | chr2_1:72799747-72799766 | Msa0223260:CDS | 35.0% |
| TATGGGTTTCCATCAAATCA+TGG | + | chr2_1:72799764-72799783 | Msa0223260:CDS | 35.0% | |
| ATGGGTTTCCATCAAATCAT+GGG | + | chr2_1:72799765-72799784 | Msa0223260:CDS | 35.0% | |
| TGCGCAAAAACAAACAAACA+TGG | - | chr2_1:72799883-72799902 | None:intergenic | 35.0% | |
| CTAAACAATGGACAAAAGCC+TGG | + | chr2_1:72797146-72797165 | Msa0223260:CDS | 40.0% | |
| GTCAAGGAACTGCAATTTCA+AGG | - | chr2_1:72797291-72797310 | None:intergenic | 40.0% | |
| !! | ATCCCCGAACTTTTTAGTCA+AGG | - | chr2_1:72797307-72797326 | None:intergenic | 40.0% |
| AGATGAATATCGTGAGGTTG+TGG | + | chr2_1:72797443-72797462 | Msa0223260:CDS | 40.0% | |
| GTGGAGAGAAGAGTTATTAC+AGG | + | chr2_1:72797462-72797481 | Msa0223260:CDS | 40.0% | |
| GTAAACTTCGAGAAAGGAGA+AGG | + | chr2_1:72797691-72797710 | Msa0223260:intron | 40.0% | |
| GCAGAATAAGTGTGACCAAA+AGG | - | chr2_1:72797728-72797747 | None:intergenic | 40.0% | |
| !! | AGATAGCTTTTTGGCCACAA+AGG | + | chr2_1:72797784-72797803 | Msa0223260:intron | 40.0% |
| !! | ATTGATGATGAGTGGTGAAG+AGG | + | chr2_1:72798029-72798048 | Msa0223260:intron | 40.0% |
| GAGAAGGGATCCTATTTGTT+TGG | - | chr2_1:72798069-72798088 | None:intergenic | 40.0% | |
| ! | TCTTTTCCAAGCTGAGATCA+AGG | + | chr2_1:72798228-72798247 | Msa0223260:intron | 40.0% |
| ! | CTTTTCCAAGCTGAGATCAA+GGG | + | chr2_1:72798229-72798248 | Msa0223260:intron | 40.0% |
| TTATTCCCTTGATCTCAGCT+TGG | - | chr2_1:72798237-72798256 | None:intergenic | 40.0% | |
| AGTGTTTAATAGCCACAACC+CGG | + | chr2_1:72798318-72798337 | Msa0223260:intron | 40.0% | |
| TCCACAATTTAGTCGAGATC+CGG | - | chr2_1:72798340-72798359 | None:intergenic | 40.0% | |
| CATTAGTAAAACAGACGCAG+AGG | - | chr2_1:72798412-72798431 | None:intergenic | 40.0% | |
| ! | CTCTGCGTCTGTTTTACTAA+TGG | + | chr2_1:72798410-72798429 | Msa0223260:intron | 40.0% |
| ACAGCAAAAGACATTCCCTA+GGG | - | chr2_1:72798444-72798463 | None:intergenic | 40.0% | |
| AACAGCAAAAGACATTCCCT+AGG | - | chr2_1:72798445-72798464 | None:intergenic | 40.0% | |
| !! | TAGGGAATGTCTTTTGCTGT+TGG | + | chr2_1:72798444-72798463 | Msa0223260:intron | 40.0% |
| !! | CTGTTGGTTTAACTGTTTGG+AGG | + | chr2_1:72798460-72798479 | Msa0223260:CDS | 40.0% |
| TTAACTGTTTGGAGGTTGTC+TGG | + | chr2_1:72798468-72798487 | Msa0223260:CDS | 40.0% | |
| GAAAAACAGCTGCTGCTAAT+TGG | - | chr2_1:72798524-72798543 | None:intergenic | 40.0% | |
| TACAGACACAACAACACAAC+AGG | - | chr2_1:72798567-72798586 | None:intergenic | 40.0% | |
| GTGTATTTGAGGGTGGTTTA+TGG | + | chr2_1:72798650-72798669 | Msa0223260:intron | 40.0% | |
| TATTTGAGGGTGGTTTATGG+AGG | + | chr2_1:72798653-72798672 | Msa0223260:intron | 40.0% | |
| ! | ATGGAGGTCTTAGGGTTTTT+CGG | + | chr2_1:72798669-72798688 | Msa0223260:intron | 40.0% |
| !! | CTTAGGGTTTTTCGGTTGTT+TGG | + | chr2_1:72798677-72798696 | Msa0223260:intron | 40.0% |
| !! | TGCACATAACTTGCTTCTGT+CGG | + | chr2_1:72798762-72798781 | Msa0223260:intron | 40.0% |
| !! | AACTTGCTTCTGTCGGATTT+TGG | + | chr2_1:72798769-72798788 | Msa0223260:intron | 40.0% |
| ! | ACTTGCTTCTGTCGGATTTT+GGG | + | chr2_1:72798770-72798789 | Msa0223260:intron | 40.0% |
| ! | CTTTTGCTTCTGTTATGGGT+TGG | + | chr2_1:72798808-72798827 | Msa0223260:intron | 40.0% |
| GGCGATAGATTTCATGTTAG+GGG | + | chr2_1:72799087-72799106 | Msa0223260:intron | 40.0% | |
| ! | GCTGATTCTGGTCTGTTATT+TGG | + | chr2_1:72799212-72799231 | Msa0223260:intron | 40.0% |
| TCAAAGGACTCAAGTTAGGT+TGG | - | chr2_1:72799268-72799287 | None:intergenic | 40.0% | |
| ACACTGCCAATAAAAGTGGT+TGG | + | chr2_1:72799461-72799480 | Msa0223260:intron | 40.0% | |
| ! | CAGTTGAGTTGTTCTCATCT+TGG | - | chr2_1:72799693-72799712 | None:intergenic | 40.0% |
| CAAGATGAGAACAACTCAAC+TGG | + | chr2_1:72799691-72799710 | Msa0223260:CDS | 40.0% | |
| CCATATCTCAAGTCCATCAA+TGG | - | chr2_1:72799749-72799768 | None:intergenic | 40.0% | |
| !! | CCATTGATGGACTTGAGATA+TGG | + | chr2_1:72799746-72799765 | Msa0223260:CDS | 40.0% |
| GTCATTGACCCATGATTTGA+TGG | - | chr2_1:72799776-72799795 | None:intergenic | 40.0% | |
| GGTTGGAAAGATTGCACATG+TGG | + | chr2_1:72796987-72797006 | Msa0223260:CDS | 45.0% | |
| CATTCTTGCTCCGTCAATAC+CGG | - | chr2_1:72797186-72797205 | None:intergenic | 45.0% | |
| TTAACTGTGTTGCACTACGG+TGG | + | chr2_1:72797512-72797531 | Msa0223260:intron | 45.0% | |
| !! | TGTGGATGTTGTGACTTGCT+AGG | + | chr2_1:72798287-72798306 | Msa0223260:intron | 45.0% |
| CCACAATTTAGTCGAGATCC+GGG | - | chr2_1:72798339-72798358 | None:intergenic | 45.0% | |
| TTTGGAGGTTGTCTGGCATA+AGG | + | chr2_1:72798475-72798494 | Msa0223260:CDS | 45.0% | |
| TTGGAGGTTGTCTGGCATAA+GGG | + | chr2_1:72798476-72798495 | Msa0223260:CDS | 45.0% | |
| ACAACAACACAACAGGTCCA+CGG | - | chr2_1:72798560-72798579 | None:intergenic | 45.0% | |
| TTGTGTCTGTATAGCTGCTG+AGG | + | chr2_1:72798576-72798595 | Msa0223260:intron | 45.0% | |
| TGTGTCTGTATAGCTGCTGA+GGG | + | chr2_1:72798577-72798596 | Msa0223260:intron | 45.0% | |
| ATGGACTCTGGGTGTATTTG+AGG | + | chr2_1:72798639-72798658 | Msa0223260:intron | 45.0% | |
| TGGACTCTGGGTGTATTTGA+GGG | + | chr2_1:72798640-72798659 | Msa0223260:intron | 45.0% | |
| GGTGGTTTATGGAGGTCTTA+GGG | + | chr2_1:72798661-72798680 | Msa0223260:intron | 45.0% | |
| ! | CTTGCTTCTGTCGGATTTTG+GGG | + | chr2_1:72798771-72798790 | Msa0223260:intron | 45.0% |
| ! | TTGCTTCTGTCGGATTTTGG+GGG | + | chr2_1:72798772-72798791 | Msa0223260:intron | 45.0% |
| TTGGGTGTACCGTCTATATG+CGG | + | chr2_1:72798827-72798846 | Msa0223260:intron | 45.0% | |
| ! | CAATAGGTGCCGCATATAGA+CGG | - | chr2_1:72798839-72798858 | None:intergenic | 45.0% |
| !! | AAGGACTCAAGTTAGGTTGG+TGG | - | chr2_1:72799265-72799284 | None:intergenic | 45.0% |
| TGGGACTCAACATCTCATGT+TGG | + | chr2_1:72799711-72799730 | Msa0223260:CDS | 45.0% | |
| TCTCATGTTGGACTCTCCAA+AGG | + | chr2_1:72799723-72799742 | Msa0223260:CDS | 45.0% | |
| TCAAGTCCATCAATGGCCTT+TGG | - | chr2_1:72799742-72799761 | None:intergenic | 45.0% | |
| ACAAAAGCCTGGCTGTGAGA+AGG | + | chr2_1:72797157-72797176 | Msa0223260:CDS | 50.0% | |
| CAAAAGCCTGGCTGTGAGAA+GGG | + | chr2_1:72797158-72797177 | Msa0223260:CDS | 50.0% | |
| ! | GAGAAGGGAACCGGTATTGA+CGG | + | chr2_1:72797173-72797192 | Msa0223260:CDS | 50.0% |
| TTTAGTCGAGATCCGGGTTG+TGG | - | chr2_1:72798333-72798352 | None:intergenic | 50.0% | |
| CCCGGATCTCGACTAAATTG+TGG | + | chr2_1:72798336-72798355 | Msa0223260:intron | 50.0% | |
| ! | TCAACGTTTTGTCGTGGCGA+TGG | + | chr2_1:72798365-72798384 | Msa0223260:intron | 50.0% |
| TTTGTCGTGGCGATGGTCTT+TGG | + | chr2_1:72798372-72798391 | Msa0223260:intron | 50.0% | |
| !! | ACTAATGGTGTTGGTGCCCT+AGG | + | chr2_1:72798425-72798444 | Msa0223260:intron | 50.0% |
| !! | CTAATGGTGTTGGTGCCCTA+GGG | + | chr2_1:72798426-72798445 | Msa0223260:intron | 50.0% |
| GTTGTCTGGCATAAGGGAGA+GGG | + | chr2_1:72798482-72798501 | Msa0223260:CDS | 50.0% | |
| TTGTCTGGCATAAGGGAGAG+GGG | + | chr2_1:72798483-72798502 | Msa0223260:CDS | 50.0% | |
| GTGTCTGTATAGCTGCTGAG+GGG | + | chr2_1:72798578-72798597 | Msa0223260:intron | 50.0% | |
| ACTCTGGGTGTATTTGAGGG+TGG | + | chr2_1:72798643-72798662 | Msa0223260:intron | 50.0% | |
| GGGTGGTTTATGGAGGTCTT+AGG | + | chr2_1:72798660-72798679 | Msa0223260:intron | 50.0% | |
| !! | TCTGTCGGATTTTGGGGGTT+TGG | + | chr2_1:72798777-72798796 | Msa0223260:intron | 50.0% |
| GACTCTCCAAAGGCCATTGA+TGG | + | chr2_1:72799733-72799752 | Msa0223260:CDS | 50.0% | |
| GGGGATCTTGACAGAGTTCC+AGG | + | chr2_1:72797321-72797340 | Msa0223260:CDS | 55.0% | |
| GGTTGTCTGGCATAAGGGAG+AGG | + | chr2_1:72798481-72798500 | Msa0223260:CDS | 55.0% | |
| TGTCTGGCATAAGGGAGAGG+GGG | + | chr2_1:72798484-72798503 | Msa0223260:CDS | 55.0% | |
| TTTCTCTGCTGCTGTGACCG+TGG | + | chr2_1:72798540-72798559 | Msa0223260:CDS | 55.0% | |
| !! | GTCGGATTTTGGGGGTTTGG+AGG | + | chr2_1:72798780-72798799 | Msa0223260:intron | 55.0% |
| TCCATTCCTTGCGTCTTGCG+AGG | + | chr2_1:72798872-72798891 | Msa0223260:intron | 55.0% | |
| CCATTCCTTGCGTCTTGCGA+GGG | + | chr2_1:72798873-72798892 | Msa0223260:intron | 55.0% | |
| CCTGGCTGTGAGAAGGGAAC+CGG | + | chr2_1:72797164-72797183 | Msa0223260:CDS | 60.0% | |
| GTCTGGCATAAGGGAGAGGG+GGG | + | chr2_1:72798485-72798504 | Msa0223260:CDS | 60.0% | |
| CCCTCGCAAGACGCAAGGAA+TGG | - | chr2_1:72798876-72798895 | None:intergenic | 60.0% | |
| TTCCTTGCGTCTTGCGAGGG+TGG | + | chr2_1:72798876-72798895 | Msa0223260:intron | 60.0% | |
| CCGGTTCCCTTCTCACAGCC+AGG | - | chr2_1:72797167-72797186 | None:intergenic | 65.0% | |
| !! | AGGGAGAGGGGGGCTGCTTT+TGG | + | chr2_1:72798495-72798514 | Msa0223260:CDS | 65.0% |
| CGCCACCCTCGCAAGACGCA+AGG | - | chr2_1:72798881-72798900 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 72796967 | 72799902 | 72796967 | ID=Msa0223260;Name=Msa0223260 |
| chr2_1 | mRNA | 72796967 | 72799902 | 72796967 | ID=Msa0223260-mRNA-1;Parent=Msa0223260;Name=Msa0223260-mRNA-1;_AED=0.39;_eAED=0.53;_QI=0|0.4|0.5|1|1|1|6|92|173 |
| chr2_1 | exon | 72796967 | 72797041 | 72796967 | ID=Msa0223260-mRNA-1:exon:21146;Parent=Msa0223260-mRNA-1 |
| chr2_1 | exon | 72797143 | 72797216 | 72797143 | ID=Msa0223260-mRNA-1:exon:21147;Parent=Msa0223260-mRNA-1 |
| chr2_1 | exon | 72797302 | 72797346 | 72797302 | ID=Msa0223260-mRNA-1:exon:21148;Parent=Msa0223260-mRNA-1 |
| chr2_1 | exon | 72797429 | 72797483 | 72797429 | ID=Msa0223260-mRNA-1:exon:21149;Parent=Msa0223260-mRNA-1 |
| chr2_1 | exon | 72798447 | 72798583 | 72798447 | ID=Msa0223260-mRNA-1:exon:21150;Parent=Msa0223260-mRNA-1 |
| chr2_1 | exon | 72799675 | 72799902 | 72799675 | ID=Msa0223260-mRNA-1:exon:21151;Parent=Msa0223260-mRNA-1 |
| chr2_1 | CDS | 72796967 | 72797041 | 72796967 | ID=Msa0223260-mRNA-1:cds;Parent=Msa0223260-mRNA-1 |
| chr2_1 | CDS | 72797143 | 72797216 | 72797143 | ID=Msa0223260-mRNA-1:cds;Parent=Msa0223260-mRNA-1 |
| chr2_1 | CDS | 72797302 | 72797346 | 72797302 | ID=Msa0223260-mRNA-1:cds;Parent=Msa0223260-mRNA-1 |
| chr2_1 | CDS | 72797429 | 72797483 | 72797429 | ID=Msa0223260-mRNA-1:cds;Parent=Msa0223260-mRNA-1 |
| chr2_1 | CDS | 72798447 | 72798583 | 72798447 | ID=Msa0223260-mRNA-1:cds;Parent=Msa0223260-mRNA-1 |
| chr2_1 | CDS | 72799675 | 72799810 | 72799675 | ID=Msa0223260-mRNA-1:cds;Parent=Msa0223260-mRNA-1 |
| chr2_1 | three_prime_UTR | 72799811 | 72799902 | 72799811 | ID=Msa0223260-mRNA-1:three_prime_utr;Parent=Msa0223260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
