Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173000 | XP_003609202.1 | 97.317 | 410 | 11 | 0 | 1 | 410 | 1 | 410 | 0.0 | 808 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173000 | sp|Q1EBV7|BASS2_ARATH | 76.739 | 417 | 82 | 5 | 1 | 410 | 1 | 409 | 0.0 | 603 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0091470 | Msa1173000 | 0.826627 | 2.445487e-54 | -8.615850e-47 |
| Msa0140290 | Msa1173000 | 0.813080 | 3.067089e-51 | -8.615850e-47 |
| Msa0166570 | Msa1173000 | 0.801166 | 1.023686e-48 | -8.615850e-47 |
| Msa0373220 | Msa1173000 | 0.820795 | 5.678386e-53 | -8.615850e-47 |
| Msa0380650 | Msa1173000 | 0.813923 | 2.001936e-51 | -8.615850e-47 |
| Msa0409300 | Msa1173000 | -0.811348 | 7.321436e-51 | -8.615850e-47 |
| Msa0430290 | Msa1173000 | 0.814366 | 1.598037e-51 | -8.615850e-47 |
| Msa0468020 | Msa1173000 | 0.817309 | 3.525878e-52 | -8.615850e-47 |
| Msa1035510 | Msa1173000 | 0.852696 | 3.896247e-61 | -8.615850e-47 |
| Msa1075420 | Msa1173000 | 0.835614 | 1.514338e-56 | -8.615850e-47 |
| Msa0267340 | Msa1173000 | 0.811064 | 8.436978e-51 | -8.615850e-47 |
| Msa1116550 | Msa1173000 | 0.821241 | 4.484160e-53 | -8.615850e-47 |
| Msa1163050 | Msa1173000 | 0.812096 | 5.034612e-51 | -8.615850e-47 |
| Msa1173000 | Msa1177240 | 0.800967 | 1.124215e-48 | -8.615850e-47 |
| Msa1173000 | Msa1177960 | 0.829272 | 5.648558e-55 | -8.615850e-47 |
| Msa1173000 | Msa1220680 | 0.810477 | 1.130773e-50 | -8.615850e-47 |
| Msa1173000 | Msa1237750 | 0.810701 | 1.011222e-50 | -8.615850e-47 |
| Msa1173000 | Msa1261390 | 0.961774 | 4.291771e-120 | -8.615850e-47 |
| Msa1173000 | Msa1261420 | 0.970808 | 3.490922e-132 | -8.615850e-47 |
| Msa1173000 | Msa1281270 | 0.801343 | 9.417862e-49 | -8.615850e-47 |
| Msa1173000 | Msa1318180 | 0.851608 | 7.942032e-61 | -8.615850e-47 |
| Msa1173000 | Msa1345030 | -0.806081 | 9.779055e-50 | -8.615850e-47 |
| Msa1173000 | Msa1380720 | 0.801065 | 1.073424e-48 | -8.615850e-47 |
| Msa1173000 | Msa1388610 | 0.812169 | 4.852407e-51 | -8.615850e-47 |
| Msa1173000 | Msa1427370 | 0.999503 | 3.157018e-317 | -8.615850e-47 |
| Msa1173000 | Msa1462600 | 0.815042 | 1.132115e-51 | -8.615850e-47 |
| Msa0882430 | Msa1173000 | -0.801396 | 9.183091e-49 | -8.615850e-47 |
| Msa0909720 | Msa1173000 | 0.839539 | 1.492055e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173000 | MtrunA17_Chr4g0062901 | 97.317 | 410 | 11 | 0 | 1 | 410 | 1 | 410 | 0.0 | 808 |
| Msa1173000 | MtrunA17_Chr2g0314491 | 44.384 | 365 | 189 | 7 | 46 | 406 | 44 | 398 | 4.30e-91 | 280 |
| Msa1173000 | MtrunA17_Chr2g0314561 | 41.053 | 380 | 218 | 5 | 29 | 406 | 12 | 387 | 2.12e-85 | 265 |
| Msa1173000 | MtrunA17_Chr7g0234581 | 41.333 | 300 | 171 | 3 | 100 | 395 | 94 | 392 | 1.45e-64 | 212 |
| Msa1173000 | MtrunA17_Chr5g0398471 | 34.551 | 356 | 214 | 6 | 62 | 398 | 68 | 423 | 1.86e-55 | 189 |
| Msa1173000 | MtrunA17_Chr5g0398481 | 31.412 | 347 | 220 | 7 | 65 | 393 | 68 | 414 | 1.79e-48 | 170 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1173000 | AT2G26900.1 | 76.739 | 417 | 82 | 5 | 1 | 410 | 1 | 409 | 0.0 | 603 |
| Msa1173000 | AT1G78560.1 | 47.305 | 334 | 169 | 5 | 75 | 404 | 71 | 401 | 2.22e-90 | 279 |
| Msa1173000 | AT3G25410.1 | 37.968 | 374 | 209 | 8 | 30 | 397 | 53 | 409 | 5.60e-65 | 214 |
| Msa1173000 | AT4G12030.2 | 36.478 | 318 | 188 | 6 | 94 | 397 | 87 | 404 | 6.15e-58 | 195 |
| Msa1173000 | AT4G22840.1 | 36.184 | 304 | 183 | 4 | 103 | 395 | 98 | 401 | 1.84e-57 | 194 |
| Msa1173000 | AT4G12030.4 | 36.741 | 313 | 184 | 6 | 99 | 397 | 1 | 313 | 4.11e-57 | 190 |
| Msa1173000 | AT4G12030.1 | 37.407 | 270 | 158 | 5 | 139 | 397 | 1 | 270 | 1.94e-49 | 169 |
| Msa1173000 | AT4G12030.5 | 37.407 | 270 | 158 | 5 | 139 | 397 | 1 | 270 | 1.94e-49 | 169 |
| Msa1173000 | AT4G12030.3 | 37.407 | 270 | 158 | 5 | 139 | 397 | 1 | 270 | 1.94e-49 | 169 |
Find 138 sgRNAs with CRISPR-Local
Find 388 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCATTTGCTATTGGTTAT+TGG | 0.150047 | 8_1:+3198461 | Msa1173000:CDS |
| TGCGGTTCTATTATAATTAT+TGG | 0.184198 | 8_1:+3199568 | Msa1173000:three_prime_UTR |
| TGATGACAAAGACGACTTTA+AGG | 0.192231 | 8_1:+3199259 | Msa1173000:CDS |
| GGGTTTCCTCATGCTGTCTA+TGG | 0.198961 | 8_1:+3196127 | Msa1173000:CDS |
| TCTTGCAACTGGTCTTATTT+TGG | 0.200101 | 8_1:+3196864 | Msa1173000:CDS |
| CGAGGTGGATAGGTATAATT+TGG | 0.253688 | 8_1:-3194202 | None:intergenic |
| ATGCCCATGTAGCAACAAAA+AGG | 0.289470 | 8_1:+3199486 | Msa1173000:three_prime_UTR |
| CATGCTGCTGCATTTGCTAT+TGG | 0.299073 | 8_1:+3198454 | Msa1173000:CDS |
| ACATACCGAAATGATTATTA+AGG | 0.327038 | 8_1:-3194234 | None:intergenic |
| TTCTACAGGTGTTCAACTAT+TGG | 0.338192 | 8_1:+3197609 | Msa1173000:intron |
| TTGTATGCGCAGGTCATCTT+GGG | 0.340243 | 8_1:+3195944 | Msa1173000:intron |
| CAATGGATTCGACCGTTCAT+TGG | 0.341941 | 8_1:-3199547 | None:intergenic |
| TGCATTTAGAAGTGAGTTGC+AGG | 0.346099 | 8_1:+3194384 | Msa1173000:CDS |
| TCTTTGTCATCAACGGGAAT+TGG | 0.350500 | 8_1:-3199248 | None:intergenic |
| ATGAGCGGAAAATAATTCAT+AGG | 0.353292 | 8_1:-3199319 | None:intergenic |
| AATAATATAATATAATTTCA+TGG | 0.358236 | 8_1:-3199720 | None:intergenic |
| AATATCCTTAATAATCATTT+CGG | 0.364566 | 8_1:+3194229 | Msa1173000:CDS |
| TAGTCCATCTAGCGTCAAAA+AGG | 0.368389 | 8_1:+3194446 | Msa1173000:CDS |
| GAAAATGAGAGTGACAAGTT+TGG | 0.368676 | 8_1:-3193997 | None:intergenic |
| GACCTATTTACTCTTGGCTT+GGG | 0.369788 | 8_1:+3196107 | Msa1173000:CDS |
| TTCTCAGACACTAAAACTTT+CGG | 0.372149 | 8_1:+3196837 | Msa1173000:intron |
| CTTGTATGCGCAGGTCATCT+TGG | 0.374061 | 8_1:+3195943 | Msa1173000:intron |
| ATCTTACCTCCCACAATTGT+AGG | 0.403675 | 8_1:-3198007 | None:intergenic |
| TAGATTGCTGGAAGAGAAAA+GGG | 0.407392 | 8_1:-3194128 | None:intergenic |
| GTAAGGAAAAGATATGGTTT+AGG | 0.411757 | 8_1:+3193902 | Msa1173000:five_prime_UTR |
| GATTATCTTTGAAGTGAACT+TGG | 0.415890 | 8_1:-3198190 | None:intergenic |
| AAGTCGTCTTTGTCATCAAC+GGG | 0.418041 | 8_1:-3199254 | None:intergenic |
| GAAAGTGTAAGGAAAAGATA+TGG | 0.418312 | 8_1:+3193896 | Msa1173000:five_prime_UTR |
| AACCCAAGCCAAGAGTAAAT+AGG | 0.419662 | 8_1:-3196109 | None:intergenic |
| TTAGCACCAGTAGCAACAAT+TGG | 0.423758 | 8_1:-3194415 | None:intergenic |
| GGTTTCCTCATGCTGTCTAT+GGG | 0.424749 | 8_1:+3196128 | Msa1173000:CDS |
| CTCGTGTTGTCCTGGAGGTC+AGG | 0.424832 | 8_1:+3196888 | Msa1173000:CDS |
| TGAAGAATTATTATTGAAGA+TGG | 0.425049 | 8_1:-3193967 | None:intergenic |
| CTCTTCCAGCAATCTATCCA+TGG | 0.431136 | 8_1:+3194135 | Msa1173000:exon |
| TGGATGTCAAGAATATCATT+TGG | 0.431918 | 8_1:+3198481 | Msa1173000:CDS |
| GGAGTGCTCTAGCTGTGTAT+TGG | 0.435900 | 8_1:+3199216 | Msa1173000:CDS |
| GAACTTACAGCAGCATCAAC+AGG | 0.438663 | 8_1:-3197684 | None:intergenic |
| CTTTCGGCTCCTCTTGCAAC+TGG | 0.440648 | 8_1:+3196853 | Msa1173000:CDS |
| GGAAGCCATGGATAGATTGC+TGG | 0.446758 | 8_1:-3194140 | None:intergenic |
| TCAGCTTCAACAAACATATC+TGG | 0.448870 | 8_1:+3195759 | Msa1173000:CDS |
| CTTACACTTTCAAGCCAGCC+TGG | 0.449641 | 8_1:-3193884 | None:intergenic |
| ATCTATCGAGTGTGGGATGC+AGG | 0.454978 | 8_1:+3198525 | Msa1173000:CDS |
| CCAGTAGCAACAATTGGATT+AGG | 0.455683 | 8_1:-3194409 | None:intergenic |
| TTTATTTCAGGTAACTTGGT+TGG | 0.456017 | 8_1:+3196079 | Msa1173000:intron |
| GAAGACATTAATTTATGCAT+TGG | 0.457196 | 8_1:+3199348 | Msa1173000:three_prime_UTR |
| AAAATGAGAGTGACAAGTTT+GGG | 0.457897 | 8_1:-3193996 | None:intergenic |
| AAGACAGTTCTTACAGCAGC+TGG | 0.466585 | 8_1:-3195989 | None:intergenic |
| CCTAATCCAATTGTTGCTAC+TGG | 0.467233 | 8_1:+3194409 | Msa1173000:CDS |
| AACTCTGGGCATGGAAGCCA+TGG | 0.467872 | 8_1:-3194152 | None:intergenic |
| ACATTTGATGCCTGACCTCC+AGG | 0.471096 | 8_1:-3196898 | None:intergenic |
| GGTATAATTTGGCTTAAGAA+TGG | 0.471739 | 8_1:-3194191 | None:intergenic |
| GAGACAGACCTATTTACTCT+TGG | 0.473070 | 8_1:+3196101 | Msa1173000:CDS |
| GAGATGTTCCTGAAAGTGCT+GGG | 0.473507 | 8_1:+3195781 | Msa1173000:CDS |
| TGCTGTCAGTGTTGTCTGCA+TGG | 0.473678 | 8_1:+3199069 | Msa1173000:CDS |
| TGACTTTATTTCAGGTAACT+TGG | 0.475397 | 8_1:+3196075 | Msa1173000:intron |
| GGAGATGTTCCTGAAAGTGC+TGG | 0.475562 | 8_1:+3195780 | Msa1173000:CDS |
| AGCCTTAGACTTACCCAAAC+GGG | 0.475608 | 8_1:-3195852 | None:intergenic |
| GCATAGTAGTTTGCGAGTCC+AGG | 0.476667 | 8_1:+3193866 | Msa1173000:five_prime_UTR |
| AGACCTATTTACTCTTGGCT+TGG | 0.477469 | 8_1:+3196106 | Msa1173000:CDS |
| ATCACGGTCACACCTTTGAT+AGG | 0.479069 | 8_1:+3198210 | Msa1173000:CDS |
| GATATTTGCAGAGTCGTTTG+TGG | 0.480740 | 8_1:+3193924 | Msa1173000:five_prime_UTR |
| ATAGATTGCTGGAAGAGAAA+AGG | 0.482657 | 8_1:-3194129 | None:intergenic |
| CTGAATATCACTAGTTGAAG+TGG | 0.484303 | 8_1:-3199614 | None:intergenic |
| CAGGCTGGCTTGAAAGTGTA+AGG | 0.486345 | 8_1:+3193885 | Msa1173000:five_prime_UTR |
| ATGGTCTCTGAAAATAACTC+TGG | 0.487045 | 8_1:-3194167 | None:intergenic |
| AGAGAGAGCAACGTTTCCCT+TGG | 0.489152 | 8_1:-3196935 | None:intergenic |
| TGTTTGCAGAGCTCTGCACT+TGG | 0.497307 | 8_1:+3198995 | Msa1173000:intron |
| TTTATGAATATTCAAGAATG+TGG | 0.499668 | 8_1:-3194087 | None:intergenic |
| GTGCTCTAGCTGTGTATTGG+AGG | 0.507859 | 8_1:+3199219 | Msa1173000:CDS |
| ATTATCTTTGAAGTGAACTT+GGG | 0.524375 | 8_1:-3198189 | None:intergenic |
| CTCCTAACGAAGCTTCTAGC+TGG | 0.529020 | 8_1:+3197651 | Msa1173000:CDS |
| GAATGTGGAATGAATGAAAG+TGG | 0.531890 | 8_1:-3194072 | None:intergenic |
| GACCAGCTAGAAGCTTCGTT+AGG | 0.533754 | 8_1:-3197653 | None:intergenic |
| TCTTACCTCCCACAATTGTA+GGG | 0.534398 | 8_1:-3198006 | None:intergenic |
| TATTTGATCAAGCCCGTGCT+AGG | 0.535455 | 8_1:+3196311 | Msa1173000:CDS |
| CTGCCGTAATGCAGCTTGGT+GGG | 0.539439 | 8_1:+3199195 | Msa1173000:intron |
| CTTGAAAGGTGCTAATTGCC+AGG | 0.540089 | 8_1:-3197973 | None:intergenic |
| TGAGCGGAAAATAATTCATA+GGG | 0.542770 | 8_1:-3199318 | None:intergenic |
| GATATTCCTCCGAGGTGGAT+AGG | 0.546749 | 8_1:-3194212 | None:intergenic |
| TAAAATACTCTAACATTGCA+AGG | 0.547665 | 8_1:-3199406 | None:intergenic |
| AAGCGAAGTAGTGAATGAGT+AGG | 0.549484 | 8_1:-3194046 | None:intergenic |
| TGTTTGTCCCTTACAGTCCA+CGG | 0.554456 | 8_1:-3196194 | None:intergenic |
| TGTTGCAACATACATATCCA+AGG | 0.564619 | 8_1:+3196918 | Msa1173000:CDS |
| TTTGTTGCCACTCTTCACAC+TGG | 0.565770 | 8_1:-3199459 | None:intergenic |
| AAGCCTTAGACTTACCCAAA+CGG | 0.566589 | 8_1:-3195853 | None:intergenic |
| AAAGTCGTCTTTGTCATCAA+CGG | 0.567068 | 8_1:-3199255 | None:intergenic |
| ATTATTGAAGATGGTTGTCG+TGG | 0.567212 | 8_1:-3193958 | None:intergenic |
| GACGATGTCTGCGAAATCCG+TGG | 0.569012 | 8_1:+3196177 | Msa1173000:CDS |
| ACTGCCGTAATGCAGCTTGG+TGG | 0.570730 | 8_1:+3199194 | Msa1173000:intron |
| CGCACAATATCTATCGAGTG+TGG | 0.573334 | 8_1:+3198517 | Msa1173000:CDS |
| AGGGACTAAAACAACTTGAA+AGG | 0.575131 | 8_1:-3197987 | None:intergenic |
| ATTGGTCTTGTCTTGCATTG+TGG | 0.575302 | 8_1:+3199586 | Msa1173000:three_prime_UTR |
| GCAGCATGTAAAGCAAGGAC+TGG | 0.578322 | 8_1:-3198439 | None:intergenic |
| GTCAGAATAACTCCTATCAA+AGG | 0.579554 | 8_1:-3198222 | None:intergenic |
| TAATTATAATAGAACCGCAA+TGG | 0.584560 | 8_1:-3199564 | None:intergenic |
| GCTAGAAGCTTCGTTAGGAG+TGG | 0.586839 | 8_1:-3197648 | None:intergenic |
| CAGACAACACTGACAGCAGA+AGG | 0.589026 | 8_1:-3199064 | None:intergenic |
| TCTGAAAATAACTCTGGGCA+TGG | 0.589097 | 8_1:-3194161 | None:intergenic |
| TAGCTACTGAGCTCTTGCCA+TGG | 0.591937 | 8_1:+3199518 | Msa1173000:three_prime_UTR |
| GCATTTAGAAGTGAGTTGCA+GGG | 0.593011 | 8_1:+3194385 | Msa1173000:CDS |
| TGGTCTCTGAAAATAACTCT+GGG | 0.595321 | 8_1:-3194166 | None:intergenic |
| TGTATGCGCAGGTCATCTTG+GGG | 0.596551 | 8_1:+3195945 | Msa1173000:intron |
| AGATGTTCCTGAAAGTGCTG+GGG | 0.599940 | 8_1:+3195782 | Msa1173000:CDS |
| TTGGTCTCGTGTTGTCCTGG+AGG | 0.601309 | 8_1:+3196883 | Msa1173000:CDS |
| TACTGGGCTTGCACAAAGGA+GGG | 0.601541 | 8_1:-3198247 | None:intergenic |
| TTACTGGGCTTGCACAAAGG+AGG | 0.605677 | 8_1:-3198248 | None:intergenic |
| GATAGATATTGTGCGTGATG+TGG | 0.609427 | 8_1:-3198509 | None:intergenic |
| AAAATAAGACCAGTTGCAAG+AGG | 0.609602 | 8_1:-3196862 | None:intergenic |
| ATGCAGCAGCATGTAAAGCA+AGG | 0.610129 | 8_1:-3198444 | None:intergenic |
| AGGAACAGCTACAAGTGGGT+TGG | 0.613007 | 8_1:-3199044 | None:intergenic |
| GTATGCGCAGGTCATCTTGG+GGG | 0.613520 | 8_1:+3195946 | Msa1173000:intron |
| GATGTTCCTGAAAGTGCTGG+GGG | 0.615383 | 8_1:+3195783 | Msa1173000:CDS |
| TACTGAGCTCTTGCCATGGT+AGG | 0.620885 | 8_1:+3199522 | Msa1173000:three_prime_UTR |
| GCAGAAGGAACAGCTACAAG+TGG | 0.624409 | 8_1:-3199049 | None:intergenic |
| TCAAACCCATAGACAGCATG+AGG | 0.627326 | 8_1:-3196133 | None:intergenic |
| AATGTCTTCTAAACAATGAG+CGG | 0.628280 | 8_1:-3199334 | None:intergenic |
| GCACAATATCTATCGAGTGT+GGG | 0.631842 | 8_1:+3198518 | Msa1173000:CDS |
| GGCAAGAGCTCAGTAGCTAG+AGG | 0.632707 | 8_1:-3199514 | None:intergenic |
| GTTCACTTCAAAGATAATCA+CGG | 0.634653 | 8_1:+3198194 | Msa1173000:CDS |
| AACTTACTGGGCTTGCACAA+AGG | 0.635521 | 8_1:-3198251 | None:intergenic |
| TTAGTCCCTACAATTGTGGG+AGG | 0.636420 | 8_1:+3198001 | Msa1173000:CDS |
| CCGTTCATTGGATCCTACCA+TGG | 0.636795 | 8_1:-3199535 | None:intergenic |
| ATTTAAACCAGTGTGAAGAG+TGG | 0.642196 | 8_1:+3199452 | Msa1173000:three_prime_UTR |
| GTTGCAACATACATATCCAA+GGG | 0.644060 | 8_1:+3196919 | Msa1173000:CDS |
| ATAATTCATAGGGCTTGCAG+TGG | 0.645991 | 8_1:-3199308 | None:intergenic |
| TTTGACGCTAGATGGACTAA+GGG | 0.646699 | 8_1:-3194442 | None:intergenic |
| AGATTGCTGGAAGAGAAAAG+GGG | 0.649196 | 8_1:-3194127 | None:intergenic |
| TTAAGGATATTCCTCCGAGG+TGG | 0.654156 | 8_1:-3194217 | None:intergenic |
| CCATGGTAGGATCCAATGAA+CGG | 0.657800 | 8_1:+3199535 | Msa1173000:three_prime_UTR |
| CAGAAGGAACAGCTACAAGT+GGG | 0.665602 | 8_1:-3199048 | None:intergenic |
| AATTTGGCTTAAGAATGGCA+TGG | 0.677374 | 8_1:-3194186 | None:intergenic |
| TGGGCTTGCACAAAGGAGGG+TGG | 0.682947 | 8_1:-3198244 | None:intergenic |
| CAAATTATACCTATCCACCT+CGG | 0.703278 | 8_1:+3194203 | Msa1173000:CDS |
| CAGCTGGCTTGTAAATACCG+AGG | 0.715500 | 8_1:-3195973 | None:intergenic |
| ATTATACCTATCCACCTCGG+AGG | 0.727862 | 8_1:+3194206 | Msa1173000:CDS |
| ATGAACGGTCGAATCCATTG+CGG | 0.730576 | 8_1:+3199550 | Msa1173000:three_prime_UTR |
| TGTCAGTGTTGTCTGCATGG+CGG | 0.751349 | 8_1:+3199072 | Msa1173000:CDS |
| TTATTAAGGATATTCCTCCG+AGG | 0.766658 | 8_1:-3194220 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAATTTTTGATATTTTTAC+TGG | + | chr8_1:3195651-3195670 | Msa1173000:intron | 10.0% |
| !! | AAATAAAATACAAAATACAT+AGG | - | chr8_1:3197007-3197026 | None:intergenic | 10.0% |
| !! | ATATATATAAAAGATACAAT+GGG | - | chr8_1:3197899-3197918 | None:intergenic | 10.0% |
| !! | TATATATATAAAAGATACAA+TGG | - | chr8_1:3197900-3197919 | None:intergenic | 10.0% |
| !! | AAATATTAGAAAAATGATTG+AGG | + | chr8_1:3193833-3193852 | Msa1173000:five_prime_UTR | 15.0% |
| !! | AATATCCTTAATAATCATTT+CGG | + | chr8_1:3194229-3194248 | Msa1173000:CDS | 15.0% |
| !!! | TTTTACATGTTTTGTATTAT+TGG | + | chr8_1:3194323-3194342 | Msa1173000:intron | 15.0% |
| !!! | TAGGAATTTTAATTTAAAGT+AGG | + | chr8_1:3194981-3195000 | Msa1173000:intron | 15.0% |
| !!! | TTTGTATTTTATTTTTTCTC+TGG | + | chr8_1:3197013-3197032 | Msa1173000:intron | 15.0% |
| !! | TAAATTAGAAACCAATTATA+TGG | + | chr8_1:3197184-3197203 | Msa1173000:intron | 15.0% |
| !!! | TTACTATTTTACCATATAAT+TGG | - | chr8_1:3197198-3197217 | None:intergenic | 15.0% |
| !!! | ATTAACTTTTTCAAATGATT+AGG | - | chr8_1:3197845-3197864 | None:intergenic | 15.0% |
| !!! | AATGTTTTTGCTTTATTATT+TGG | + | chr8_1:3198143-3198162 | Msa1173000:intron | 15.0% |
| !! | AAATTATTAATCTATTGATC+TGG | - | chr8_1:3198835-3198854 | None:intergenic | 15.0% |
| !! | TGAAGAATTATTATTGAAGA+TGG | - | chr8_1:3193970-3193989 | None:intergenic | 20.0% |
| !! | TTTATGAATATTCAAGAATG+TGG | - | chr8_1:3194090-3194109 | None:intergenic | 20.0% |
| !! | TTGACAAAAAATGAAATAAC+TGG | + | chr8_1:3194530-3194549 | Msa1173000:intron | 20.0% |
| !!! | GTAATTGAAGTTTTGATATA+TGG | + | chr8_1:3194721-3194740 | Msa1173000:intron | 20.0% |
| !!! | TTTTGTTTGTAATTGTTGAA+TGG | + | chr8_1:3194808-3194827 | Msa1173000:intron | 20.0% |
| !!! | TTTAATTTAAAGTAGGAACA+AGG | + | chr8_1:3194988-3195007 | Msa1173000:intron | 20.0% |
| !!! | TTAATTTAAAGTAGGAACAA+GGG | + | chr8_1:3194989-3195008 | Msa1173000:intron | 20.0% |
| !! | TTAGAAGTTACATTACTTAA+TGG | - | chr8_1:3195267-3195286 | None:intergenic | 20.0% |
| !! | ATTCTGATTTATTTCATTGA+TGG | + | chr8_1:3195413-3195432 | Msa1173000:intron | 20.0% |
| !! | TTCTGATTTATTTCATTGAT+GGG | + | chr8_1:3195414-3195433 | Msa1173000:intron | 20.0% |
| !! | AATGAAAATCAGAAAAACAA+AGG | + | chr8_1:3195550-3195569 | Msa1173000:intron | 20.0% |
| !!! | TTTCAATAATTTTCTCATAC+TGG | - | chr8_1:3195815-3195834 | None:intergenic | 20.0% |
| !!! | TATTGTTATGACTTTATTTC+AGG | + | chr8_1:3196067-3196086 | Msa1173000:intron | 20.0% |
| !! | AATAAATCATAATTAGTGGT+AGG | - | chr8_1:3196255-3196274 | None:intergenic | 20.0% |
| !! | ACACAATAAATCATAATTAG+TGG | - | chr8_1:3196259-3196278 | None:intergenic | 20.0% |
| !! | TGGTAATTCAAAATATAACA+GGG | - | chr8_1:3196426-3196445 | None:intergenic | 20.0% |
| !! | GGTAAAATAGTAAAACTTAT+AGG | + | chr8_1:3197205-3197224 | Msa1173000:intron | 20.0% |
| !! | AATAGTAAAACTTATAGGAT+TGG | + | chr8_1:3197210-3197229 | Msa1173000:intron | 20.0% |
| !! | ATATACATTACCACAAATTT+AGG | - | chr8_1:3197320-3197339 | None:intergenic | 20.0% |
| !! | CATTTGAAAAAGTTAATATC+TGG | + | chr8_1:3197848-3197867 | Msa1173000:intron | 20.0% |
| !!! | TATTAGGATGTATGTTTTTT+AGG | + | chr8_1:3198592-3198611 | Msa1173000:intron | 20.0% |
| !! | ATATTAATTGTAAGTGCTTT+AGG | + | chr8_1:3198942-3198961 | Msa1173000:intron | 20.0% |
| !!! | GTTAGAGTATTTTAGAATTT+AGG | + | chr8_1:3199415-3199434 | Msa1173000:three_prime_UTR | 20.0% |
| ! | ACATACCGAAATGATTATTA+AGG | - | chr8_1:3194237-3194256 | None:intergenic | 25.0% |
| ! | GTACAAACAATTCATATTGA+AGG | - | chr8_1:3194611-3194630 | None:intergenic | 25.0% |
| ! | ACCAAGAACTTTAATCTAAA+AGG | - | chr8_1:3194949-3194968 | None:intergenic | 25.0% |
| !!! | TCTTGGTTCTATTTTAAAGT+AGG | + | chr8_1:3194962-3194981 | Msa1173000:intron | 25.0% |
| ! | GTATACCTAAAATTCAGAAA+TGG | - | chr8_1:3195313-3195332 | None:intergenic | 25.0% |
| ! | ATTGATATAATCTATCTTGC+CGG | + | chr8_1:3195368-3195387 | Msa1173000:intron | 25.0% |
| !! | ATATAACTATGTGCTTTTCA+AGG | + | chr8_1:3195437-3195456 | Msa1173000:intron | 25.0% |
| ! | ATCAGAAAAACAAAGGAAAA+TGG | + | chr8_1:3195557-3195576 | Msa1173000:intron | 25.0% |
| ! | CTTATTGTTCTGTATAAGTT+AGG | + | chr8_1:3195620-3195639 | Msa1173000:intron | 25.0% |
| ! | TAAGAAATTGGAAAGATGTT+AGG | - | chr8_1:3195890-3195909 | None:intergenic | 25.0% |
| ! | CTACTGAACAATTAAGAAAT+TGG | - | chr8_1:3195902-3195921 | None:intergenic | 25.0% |
| !!! | ATGATTTATTGTGTTTTTGC+AGG | + | chr8_1:3196265-3196284 | Msa1173000:intron | 25.0% |
| ! | GTGGTAATTCAAAATATAAC+AGG | - | chr8_1:3196427-3196446 | None:intergenic | 25.0% |
| !! | TCTTTGATAACAATCTTATG+TGG | - | chr8_1:3196446-3196465 | None:intergenic | 25.0% |
| ! | TGATAACAATCATAAGTCAA+TGG | - | chr8_1:3196482-3196501 | None:intergenic | 25.0% |
| ! | ACATAGCTAGTTATTTATTG+AGG | + | chr8_1:3196561-3196580 | Msa1173000:intron | 25.0% |
| !!! | TTATTTATTGAGGCCATTTT+TGG | + | chr8_1:3196571-3196590 | Msa1173000:intron | 25.0% |
| !!! | TATTTATTGAGGCCATTTTT+GGG | + | chr8_1:3196572-3196591 | Msa1173000:intron | 25.0% |
| ! | ACAGAACAAATAAATAGAAG+TGG | - | chr8_1:3196666-3196685 | None:intergenic | 25.0% |
| ! | GAGACAAATATTTGAAAGAT+TGG | + | chr8_1:3196727-3196746 | Msa1173000:intron | 25.0% |
| ! | GAAGTTAATGTTAGCAAATT+TGG | - | chr8_1:3196814-3196833 | None:intergenic | 25.0% |
| !!! | ATTTTTTCTCTGGCTTATTT+TGG | + | chr8_1:3197023-3197042 | Msa1173000:intron | 25.0% |
| ! | CAATCAAAATCAACTTGTAT+GGG | - | chr8_1:3197145-3197164 | None:intergenic | 25.0% |
| ! | TCAATCAAAATCAACTTGTA+TGG | - | chr8_1:3197146-3197165 | None:intergenic | 25.0% |
| !!! | CAAGTTGATTTTGATTGAAT+TGG | + | chr8_1:3197148-3197167 | Msa1173000:intron | 25.0% |
| !!! | TTTATTAACAGCTTGCTAAT+AGG | - | chr8_1:3197783-3197802 | None:intergenic | 25.0% |
| ! | GAAAAAGTTAATATCTGGAT+AGG | + | chr8_1:3197853-3197872 | Msa1173000:intron | 25.0% |
| ! | TTATATGTGTTAGAGTTTGT+TGG | + | chr8_1:3198044-3198063 | Msa1173000:intron | 25.0% |
| !!! | ATTATCTTTGAAGTGAACTT+GGG | - | chr8_1:3198192-3198211 | None:intergenic | 25.0% |
| !!! | TATAACTTGTTCAACTTACT+GGG | - | chr8_1:3198266-3198285 | None:intergenic | 25.0% |
| ! | ATTATACCAAAGTAAACTGT+TGG | - | chr8_1:3198315-3198334 | None:intergenic | 25.0% |
| ! | AGCTATTTGTAGAATTAAGA+GGG | - | chr8_1:3198557-3198576 | None:intergenic | 25.0% |
| ! | TGTTGTTGAGTACAAATATT+AGG | + | chr8_1:3198576-3198595 | Msa1173000:intron | 25.0% |
| !!! | TGTATGTTTTTTAGGCTTTT+AGG | + | chr8_1:3198600-3198619 | Msa1173000:intron | 25.0% |
| !! | ATGCTGATTATATATACCTA+TGG | + | chr8_1:3198627-3198646 | Msa1173000:intron | 25.0% |
| ! | ATTATATATACCTATGGAGT+TGG | + | chr8_1:3198633-3198652 | Msa1173000:intron | 25.0% |
| ! | ATGACATTGAACTAAATTTC+TGG | + | chr8_1:3198858-3198877 | Msa1173000:intron | 25.0% |
| ! | TGACATTGAACTAAATTTCT+GGG | + | chr8_1:3198859-3198878 | Msa1173000:intron | 25.0% |
| !!! | GACATTTTTTTTCCTTTTCT+CGG | + | chr8_1:3199103-3199122 | Msa1173000:intron | 25.0% |
| ! | GAAGACATTAATTTATGCAT+TGG | + | chr8_1:3199348-3199367 | Msa1173000:three_prime_UTR | 25.0% |
| ! | TAAAATACTCTAACATTGCA+AGG | - | chr8_1:3199409-3199428 | None:intergenic | 25.0% |
| ! | TAATTATAATAGAACCGCAA+TGG | - | chr8_1:3199567-3199586 | None:intergenic | 25.0% |
| ! | TGCGGTTCTATTATAATTAT+TGG | + | chr8_1:3199568-3199587 | Msa1173000:three_prime_UTR | 25.0% |
| ! | GAAAGTGTAAGGAAAAGATA+TGG | + | chr8_1:3193896-3193915 | Msa1173000:five_prime_UTR | 30.0% |
| GTAAGGAAAAGATATGGTTT+AGG | + | chr8_1:3193902-3193921 | Msa1173000:five_prime_UTR | 30.0% | |
| AAAATGAGAGTGACAAGTTT+GGG | - | chr8_1:3193999-3194018 | None:intergenic | 30.0% | |
| !!! | AAGGGGTTTTAGTTTGAAAA+GGG | - | chr8_1:3194113-3194132 | None:intergenic | 30.0% |
| !!! | AAAGGGGTTTTAGTTTGAAA+AGG | - | chr8_1:3194114-3194133 | None:intergenic | 30.0% |
| ! | GGTATAATTTGGCTTAAGAA+TGG | - | chr8_1:3194194-3194213 | None:intergenic | 30.0% |
| !! | GAAGTTTTGATATATGGAGA+AGG | + | chr8_1:3194727-3194746 | Msa1173000:intron | 30.0% |
| GTTACGAGTTAGCTAATTTA+GGG | + | chr8_1:3194781-3194800 | Msa1173000:intron | 30.0% | |
| !! | CCTTTTGTCATTTGAAAAGA+CGG | + | chr8_1:3194837-3194856 | Msa1173000:intron | 30.0% |
| !! | CTTTTGTCATTTGAAAAGAC+GGG | + | chr8_1:3194838-3194857 | Msa1173000:intron | 30.0% |
| TGTTAAAGATCCTGTATGAA+GGG | + | chr8_1:3194865-3194884 | Msa1173000:intron | 30.0% | |
| ! | GCCTTTTAGATTAAAGTTCT+TGG | + | chr8_1:3194945-3194964 | Msa1173000:intron | 30.0% |
| TTAAGTGCAAATACTGTCAA+CGG | + | chr8_1:3195121-3195140 | Msa1173000:intron | 30.0% | |
| TTTGTTTAAATTCCGCTATG+TGG | - | chr8_1:3195158-3195177 | None:intergenic | 30.0% | |
| AAAATTAGCATTAACAGTCG+TGG | - | chr8_1:3195198-3195217 | None:intergenic | 30.0% | |
| ! | ATCCTCCATTTCTGAATTTT+AGG | + | chr8_1:3195305-3195324 | Msa1173000:intron | 30.0% |
| TACCTAAAATTCAGAAATGG+AGG | - | chr8_1:3195310-3195329 | None:intergenic | 30.0% | |
| AGCAATCTATGGTAAAATTC+CGG | - | chr8_1:3195390-3195409 | None:intergenic | 30.0% | |
| ! | GAATTTTACCATAGATTGCT+AGG | + | chr8_1:3195390-3195409 | Msa1173000:intron | 30.0% |
| TTATTCCAGGAAGAAAAGAA+TGG | - | chr8_1:3195479-3195498 | None:intergenic | 30.0% | |
| ! | GCATTTAAGTTCTTTATTCC+AGG | - | chr8_1:3195492-3195511 | None:intergenic | 30.0% |
| AGACAATGTCATATAGTAGT+TGG | - | chr8_1:3195594-3195613 | None:intergenic | 30.0% | |
| ACTTGTTTATTGCTATGTCT+AGG | + | chr8_1:3195718-3195737 | Msa1173000:intron | 30.0% | |
| ! | TGACTTTATTTCAGGTAACT+TGG | + | chr8_1:3196075-3196094 | Msa1173000:intron | 30.0% |
| ! | TTTATTTCAGGTAACTTGGT+TGG | + | chr8_1:3196079-3196098 | Msa1173000:intron | 30.0% |
| AAATCATAATTAGTGGTAGG+AGG | - | chr8_1:3196252-3196271 | None:intergenic | 30.0% | |
| !! | ATTTATTGTGTTTTTGCAGG+TGG | + | chr8_1:3196268-3196287 | Msa1173000:intron | 30.0% |
| !! | TTTATTGTGTTTTTGCAGGT+GGG | + | chr8_1:3196269-3196288 | Msa1173000:intron | 30.0% |
| TAGCAAATTTGGCATGATAT+AGG | - | chr8_1:3196803-3196822 | None:intergenic | 30.0% | |
| TTCTCAGACACTAAAACTTT+CGG | + | chr8_1:3196837-3196856 | Msa1173000:intron | 30.0% | |
| !! | TTAACTTGCATTTCCTTGTT+TGG | + | chr8_1:3196978-3196997 | Msa1173000:intron | 30.0% |
| AATACATAGGAAACCAAACA+AGG | - | chr8_1:3196994-3197013 | None:intergenic | 30.0% | |
| TTGATTGAATTGGATCAGAT+CGG | + | chr8_1:3197158-3197177 | Msa1173000:intron | 30.0% | |
| AGGTGTTTGCAAATTGAATA+GGG | - | chr8_1:3197264-3197283 | None:intergenic | 30.0% | |
| TAGGTGTTTGCAAATTGAAT+AGG | - | chr8_1:3197265-3197284 | None:intergenic | 30.0% | |
| CAATTTGCAAACACCTAAAA+AGG | + | chr8_1:3197268-3197287 | Msa1173000:intron | 30.0% | |
| AGCTAAAATAACTTCATCCA+GGG | - | chr8_1:3197493-3197512 | None:intergenic | 30.0% | |
| AAGCTAAAATAACTTCATCC+AGG | - | chr8_1:3197494-3197513 | None:intergenic | 30.0% | |
| !! | AGAAGTTGTTTTCAGAAATC+AGG | + | chr8_1:3197565-3197584 | Msa1173000:intron | 30.0% |
| ! | CATGTTATTTACCATTCTAC+AGG | + | chr8_1:3197595-3197614 | Msa1173000:intron | 30.0% |
| !!! | TGCCTATTTTTATGCATGAA+AGG | + | chr8_1:3197712-3197731 | Msa1173000:intron | 30.0% |
| !!! | GCCTATTTTTATGCATGAAA+GGG | + | chr8_1:3197713-3197732 | Msa1173000:intron | 30.0% |
| TCCCTTTCATGCATAAAAAT+AGG | - | chr8_1:3197717-3197736 | None:intergenic | 30.0% | |
| ATATCTGGATAGGATACTTT+CGG | + | chr8_1:3197863-3197882 | Msa1173000:intron | 30.0% | |
| AGGTATGGTTCTTAATGATT+AGG | + | chr8_1:3198109-3198128 | Msa1173000:intron | 30.0% | |
| !! | GCTTTATTATTTGGCAGTTT+TGG | + | chr8_1:3198152-3198171 | Msa1173000:intron | 30.0% |
| !! | GATTATCTTTGAAGTGAACT+TGG | - | chr8_1:3198193-3198212 | None:intergenic | 30.0% |
| GTTCACTTCAAAGATAATCA+CGG | + | chr8_1:3198194-3198213 | Msa1173000:CDS | 30.0% | |
| !! | CTATAACTTGTTCAACTTAC+TGG | - | chr8_1:3198267-3198286 | None:intergenic | 30.0% |
| ! | AAGTAAACTGTTGGCTAAAA+GGG | - | chr8_1:3198306-3198325 | None:intergenic | 30.0% |
| ! | AAAGTAAACTGTTGGCTAAA+AGG | - | chr8_1:3198307-3198326 | None:intergenic | 30.0% |
| ! | TTTTAGCCAACAGTTTACTT+TGG | + | chr8_1:3198306-3198325 | Msa1173000:intron | 30.0% |
| !!! | CATGTATTGACTTTTCAGAT+CGG | + | chr8_1:3198370-3198389 | Msa1173000:intron | 30.0% |
| !!! | ATGTATTGACTTTTCAGATC+GGG | + | chr8_1:3198371-3198390 | Msa1173000:intron | 30.0% |
| TGGATGTCAAGAATATCATT+TGG | + | chr8_1:3198481-3198500 | Msa1173000:CDS | 30.0% | |
| CTATTTGTAGAATTAAGAGG+GGG | - | chr8_1:3198555-3198574 | None:intergenic | 30.0% | |
| GCTATTTGTAGAATTAAGAG+GGG | - | chr8_1:3198556-3198575 | None:intergenic | 30.0% | |
| CAGCTATTTGTAGAATTAAG+AGG | - | chr8_1:3198558-3198577 | None:intergenic | 30.0% | |
| ! | CAGAACGAACATAATTTTTC+AGG | - | chr8_1:3198718-3198737 | None:intergenic | 30.0% |
| GATGTCAATCTTCTGTAATT+TGG | - | chr8_1:3198790-3198809 | None:intergenic | 30.0% | |
| GACATTGAACTAAATTTCTG+GGG | + | chr8_1:3198860-3198879 | Msa1173000:intron | 30.0% | |
| TGAGCGGAAAATAATTCATA+GGG | - | chr8_1:3199321-3199340 | None:intergenic | 30.0% | |
| ATGAGCGGAAAATAATTCAT+AGG | - | chr8_1:3199322-3199341 | None:intergenic | 30.0% | |
| AATGTCTTCTAAACAATGAG+CGG | - | chr8_1:3199337-3199356 | None:intergenic | 30.0% | |
| ATTATTGAAGATGGTTGTCG+TGG | - | chr8_1:3193961-3193980 | None:intergenic | 35.0% | |
| GAAAATGAGAGTGACAAGTT+TGG | - | chr8_1:3194000-3194019 | None:intergenic | 35.0% | |
| GAATGTGGAATGAATGAAAG+TGG | - | chr8_1:3194075-3194094 | None:intergenic | 35.0% | |
| TAGATTGCTGGAAGAGAAAA+GGG | - | chr8_1:3194131-3194150 | None:intergenic | 35.0% | |
| ATAGATTGCTGGAAGAGAAA+AGG | - | chr8_1:3194132-3194151 | None:intergenic | 35.0% | |
| ! | TGGTCTCTGAAAATAACTCT+GGG | - | chr8_1:3194169-3194188 | None:intergenic | 35.0% |
| ! | ATGGTCTCTGAAAATAACTC+TGG | - | chr8_1:3194170-3194189 | None:intergenic | 35.0% |
| ! | AATTTGGCTTAAGAATGGCA+TGG | - | chr8_1:3194189-3194208 | None:intergenic | 35.0% |
| CAAATTATACCTATCCACCT+CGG | + | chr8_1:3194203-3194222 | Msa1173000:CDS | 35.0% | |
| TTATTAAGGATATTCCTCCG+AGG | - | chr8_1:3194223-3194242 | None:intergenic | 35.0% | |
| TGTTGTAGTAACGTTTGATC+TGG | + | chr8_1:3194254-3194273 | Msa1173000:intron | 35.0% | |
| ! | ATTACCTTTTTGACGCTAGA+TGG | - | chr8_1:3194453-3194472 | None:intergenic | 35.0% |
| ATAACTGGATGTAACCAAGA+TGG | + | chr8_1:3194545-3194564 | Msa1173000:intron | 35.0% | |
| ! | TTCATATTGAAGGTGTGTCT+GGG | - | chr8_1:3194601-3194620 | None:intergenic | 35.0% |
| ! | ATTCATATTGAAGGTGTGTC+TGG | - | chr8_1:3194602-3194621 | None:intergenic | 35.0% |
| TGCATAGCTTATACAAGCAA+TGG | + | chr8_1:3194631-3194650 | Msa1173000:intron | 35.0% | |
| GCATAGCTTATACAAGCAAT+GGG | + | chr8_1:3194632-3194651 | Msa1173000:intron | 35.0% | |
| CTTACTGAGAATTATGGAGA+GGG | + | chr8_1:3194668-3194687 | Msa1173000:intron | 35.0% | |
| GGTTACGAGTTAGCTAATTT+AGG | + | chr8_1:3194780-3194799 | Msa1173000:intron | 35.0% | |
| ! | CCGTCTTTTCAAATGACAAA+AGG | - | chr8_1:3194840-3194859 | None:intergenic | 35.0% |
| CTGTTAAAGATCCTGTATGA+AGG | + | chr8_1:3194864-3194883 | Msa1173000:intron | 35.0% | |
| AAGCAATTACAGATAACCTC+AGG | + | chr8_1:3195223-3195242 | Msa1173000:intron | 35.0% | |
| ! | CTAGTCCATAATCTTTGAGA+CGG | - | chr8_1:3195348-3195367 | None:intergenic | 35.0% |
| ATCAGAATCCTAGCAATCTA+TGG | - | chr8_1:3195401-3195420 | None:intergenic | 35.0% | |
| ! | TTCATCCATTCTTTTCTTCC+TGG | + | chr8_1:3195471-3195490 | Msa1173000:intron | 35.0% |
| TCTGTATAAGTTAGGTACTC+TGG | + | chr8_1:3195628-3195647 | Msa1173000:intron | 35.0% | |
| TCAGCTTCAACAAACATATC+TGG | + | chr8_1:3195759-3195778 | Msa1173000:CDS | 35.0% | |
| !!! | TAATTTTCTCATACTGGCTC+AGG | - | chr8_1:3195809-3195828 | None:intergenic | 35.0% |
| ATTGTTCAGTAGTTGAAAGC+TGG | + | chr8_1:3195910-3195929 | Msa1173000:intron | 35.0% | |
| ATCATATAGTGCTTTGTACC+TGG | + | chr8_1:3196526-3196545 | Msa1173000:intron | 35.0% | |
| AACACTGCATATCCCAAAAA+TGG | - | chr8_1:3196587-3196606 | None:intergenic | 35.0% | |
| ATATGCAGTGTTTCTTTGTG+TGG | + | chr8_1:3196595-3196614 | Msa1173000:intron | 35.0% | |
| TATGCAGTGTTTCTTTGTGT+GGG | + | chr8_1:3196596-3196615 | Msa1173000:intron | 35.0% | |
| AAAATAAGACCAGTTGCAAG+AGG | - | chr8_1:3196865-3196884 | None:intergenic | 35.0% | |
| !!! | TCTTGCAACTGGTCTTATTT+TGG | + | chr8_1:3196864-3196883 | Msa1173000:CDS | 35.0% |
| TGTTGCAACATACATATCCA+AGG | + | chr8_1:3196918-3196937 | Msa1173000:CDS | 35.0% | |
| GTTGCAACATACATATCCAA+GGG | + | chr8_1:3196919-3196938 | Msa1173000:CDS | 35.0% | |
| !!! | GGCTTATTTTGGTTGCTATT+TGG | + | chr8_1:3197034-3197053 | Msa1173000:intron | 35.0% |
| !! | ATGCTTGCTGTCTTTAAAAG+AGG | + | chr8_1:3197093-3197112 | Msa1173000:intron | 35.0% |
| AAATCAACTTGTATGGGATC+AGG | - | chr8_1:3197139-3197158 | None:intergenic | 35.0% | |
| ATTTAGGTGTGTTTGGATTG+CGG | - | chr8_1:3197304-3197323 | None:intergenic | 35.0% | |
| TCCAAACACACCTAAATTTG+TGG | + | chr8_1:3197307-3197326 | Msa1173000:intron | 35.0% | |
| ACCACAAATTTAGGTGTGTT+TGG | - | chr8_1:3197311-3197330 | None:intergenic | 35.0% | |
| !!! | AATCAGAGAAGTACTTTTGC+AGG | - | chr8_1:3197364-3197383 | None:intergenic | 35.0% |
| CGTGTTTGAAGAGGATATTT+AGG | - | chr8_1:3197399-3197418 | None:intergenic | 35.0% | |
| AATTACTCTTGTGTGTGTCA+TGG | + | chr8_1:3197447-3197466 | Msa1173000:intron | 35.0% | |
| ATAGTTGAACACCTGTAGAA+TGG | - | chr8_1:3197609-3197628 | None:intergenic | 35.0% | |
| TTCTACAGGTGTTCAACTAT+TGG | + | chr8_1:3197609-3197628 | Msa1173000:intron | 35.0% | |
| !! | ATTAACAGCTTGCTAATAGG+AGG | - | chr8_1:3197780-3197799 | None:intergenic | 35.0% |
| ! | TGTTGCTCTTTCTCTTTTTC+AGG | + | chr8_1:3197949-3197968 | Msa1173000:intron | 35.0% |
| !! | GTTGCTCTTTCTCTTTTTCA+GGG | + | chr8_1:3197950-3197969 | Msa1173000:intron | 35.0% |
| AGGGACTAAAACAACTTGAA+AGG | - | chr8_1:3197990-3198009 | None:intergenic | 35.0% | |
| !!! | TGTTTTAGTCCCTACAATTG+TGG | + | chr8_1:3197997-3198016 | Msa1173000:CDS | 35.0% |
| !! | GTTTTAGTCCCTACAATTGT+GGG | + | chr8_1:3197998-3198017 | Msa1173000:CDS | 35.0% |
| !! | ATGTGTTAGAGTTTGTTGGA+CGG | + | chr8_1:3198048-3198067 | Msa1173000:intron | 35.0% |
| TATACTAATGTGTCTCCACT+TGG | + | chr8_1:3198082-3198101 | Msa1173000:intron | 35.0% | |
| GTCAGAATAACTCCTATCAA+AGG | - | chr8_1:3198225-3198244 | None:intergenic | 35.0% | |
| !! | CTGCATTTGCTATTGGTTAT+TGG | + | chr8_1:3198461-3198480 | Msa1173000:CDS | 35.0% |
| CAAACAACAAGAAAAGCTAG+AGG | - | chr8_1:3198760-3198779 | None:intergenic | 35.0% | |
| GTCAATCTTCTGTAATTTGG+CGG | - | chr8_1:3198787-3198806 | None:intergenic | 35.0% | |
| ! | TTGAACTAAATTTCTGGGGA+AGG | + | chr8_1:3198864-3198883 | Msa1173000:intron | 35.0% |
| ! | TGAACTAAATTTCTGGGGAA+GGG | + | chr8_1:3198865-3198884 | Msa1173000:intron | 35.0% |
| AAAGTCGTCTTTGTCATCAA+CGG | - | chr8_1:3199258-3199277 | None:intergenic | 35.0% | |
| TGATGACAAAGACGACTTTA+AGG | + | chr8_1:3199259-3199278 | Msa1173000:CDS | 35.0% | |
| ATTTAAACCAGTGTGAAGAG+TGG | + | chr8_1:3199452-3199471 | Msa1173000:three_prime_UTR | 35.0% | |
| CTGAATATCACTAGTTGAAG+TGG | - | chr8_1:3199617-3199636 | None:intergenic | 35.0% | |
| GATATTTGCAGAGTCGTTTG+TGG | + | chr8_1:3193924-3193943 | Msa1173000:five_prime_UTR | 40.0% | |
| AAGCGAAGTAGTGAATGAGT+AGG | - | chr8_1:3194049-3194068 | None:intergenic | 40.0% | |
| AGATTGCTGGAAGAGAAAAG+GGG | - | chr8_1:3194130-3194149 | None:intergenic | 40.0% | |
| TCTGAAAATAACTCTGGGCA+TGG | - | chr8_1:3194164-3194183 | None:intergenic | 40.0% | |
| CGAGGTGGATAGGTATAATT+TGG | - | chr8_1:3194205-3194224 | None:intergenic | 40.0% | |
| TGCATTTAGAAGTGAGTTGC+AGG | + | chr8_1:3194384-3194403 | Msa1173000:CDS | 40.0% | |
| GCATTTAGAAGTGAGTTGCA+GGG | + | chr8_1:3194385-3194404 | Msa1173000:CDS | 40.0% | |
| CCAGTAGCAACAATTGGATT+AGG | - | chr8_1:3194412-3194431 | None:intergenic | 40.0% | |
| CCTAATCCAATTGTTGCTAC+TGG | + | chr8_1:3194409-3194428 | Msa1173000:CDS | 40.0% | |
| TTAGCACCAGTAGCAACAAT+TGG | - | chr8_1:3194418-3194437 | None:intergenic | 40.0% | |
| !! | TTTGACGCTAGATGGACTAA+GGG | - | chr8_1:3194445-3194464 | None:intergenic | 40.0% |
| !!! | TTTTGACGCTAGATGGACTA+AGG | - | chr8_1:3194446-3194465 | None:intergenic | 40.0% |
| TAGTCCATCTAGCGTCAAAA+AGG | + | chr8_1:3194446-3194465 | Msa1173000:CDS | 40.0% | |
| GCATGCCTTACTGAGAATTA+TGG | + | chr8_1:3194662-3194681 | Msa1173000:intron | 40.0% | |
| CCTCTCCATAATTCTCAGTA+AGG | - | chr8_1:3194670-3194689 | None:intergenic | 40.0% | |
| CCTTACTGAGAATTATGGAG+AGG | + | chr8_1:3194667-3194686 | Msa1173000:intron | 40.0% | |
| TTATGGAGAGGGATGTGTAA+TGG | + | chr8_1:3194679-3194698 | Msa1173000:intron | 40.0% | |
| CGTAACCTGCATAATGCATA+CGG | - | chr8_1:3194767-3194786 | None:intergenic | 40.0% | |
| ACGAGTTAGCTAATTTAGGG+CGG | + | chr8_1:3194784-3194803 | Msa1173000:intron | 40.0% | |
| TGTTATGGGAAGAGTGGAAA+AGG | - | chr8_1:3195032-3195051 | None:intergenic | 40.0% | |
| TGCTATAGTCCAGGTATAGT+CGG | - | chr8_1:3195055-3195074 | None:intergenic | 40.0% | |
| ATACCTGGACTATAGCATAG+CGG | + | chr8_1:3195058-3195077 | Msa1173000:intron | 40.0% | |
| !! | TCCATAATCTTTGAGACGGA+GGG | - | chr8_1:3195344-3195363 | None:intergenic | 40.0% |
| ! | TAACCACTCTTTTTCCCGTT+TGG | + | chr8_1:3195838-3195857 | Msa1173000:CDS | 40.0% |
| ! | AACCACTCTTTTTCCCGTTT+GGG | + | chr8_1:3195839-3195858 | Msa1173000:CDS | 40.0% |
| AAGCCTTAGACTTACCCAAA+CGG | - | chr8_1:3195856-3195875 | None:intergenic | 40.0% | |
| !! | TGACTTTAACTTGTATGCGC+AGG | + | chr8_1:3195934-3195953 | Msa1173000:intron | 40.0% |
| TCTTTCTGCAGCTAGTTACA+TGG | + | chr8_1:3196008-3196027 | Msa1173000:intron | 40.0% | |
| GAGACAGACCTATTTACTCT+TGG | + | chr8_1:3196101-3196120 | Msa1173000:CDS | 40.0% | |
| AGACCTATTTACTCTTGGCT+TGG | + | chr8_1:3196106-3196125 | Msa1173000:CDS | 40.0% | |
| GACCTATTTACTCTTGGCTT+GGG | + | chr8_1:3196107-3196126 | Msa1173000:CDS | 40.0% | |
| AACCCAAGCCAAGAGTAAAT+AGG | - | chr8_1:3196112-3196131 | None:intergenic | 40.0% | |
| TGCAATGAAAAAGCCTAGCA+CGG | - | chr8_1:3196327-3196346 | None:intergenic | 40.0% | |
| !!! | GCTAGGCTTTTTCATTGCAA+TGG | + | chr8_1:3196328-3196347 | Msa1173000:CDS | 40.0% |
| CTATGTTAAGTCCTACAACC+AGG | - | chr8_1:3196547-3196566 | None:intergenic | 40.0% | |
| ! | GTTTCTTTGTGTGGGTTACT+TGG | + | chr8_1:3196604-3196623 | Msa1173000:intron | 40.0% |
| AGAAGTGGCAGACATCAATA+TGG | - | chr8_1:3196651-3196670 | None:intergenic | 40.0% | |
| ACTTGTATGGGATCAGGTTT+CGG | - | chr8_1:3197133-3197152 | None:intergenic | 40.0% | |
| ! | CGGTACAAGAAAGCCTTTTT+AGG | - | chr8_1:3197284-3197303 | None:intergenic | 40.0% |
| AACTTCATCCAGGGATAACA+CGG | - | chr8_1:3197484-3197503 | None:intergenic | 40.0% | |
| TCTTACCTCCCACAATTGTA+GGG | - | chr8_1:3198009-3198028 | None:intergenic | 40.0% | |
| ATCTTACCTCCCACAATTGT+AGG | - | chr8_1:3198010-3198029 | None:intergenic | 40.0% | |
| !! | TGTGTTAGAGTTTGTTGGAC+GGG | + | chr8_1:3198049-3198068 | Msa1173000:intron | 40.0% |
| ! | TAAACTGTTGGCTAAAAGGG+TGG | - | chr8_1:3198303-3198322 | None:intergenic | 40.0% |
| TGCAAAGCAAGAATGACAAG+TGG | - | chr8_1:3198340-3198359 | None:intergenic | 40.0% | |
| CTTGTCATTCTTGCTTTGCA+TGG | + | chr8_1:3198340-3198359 | Msa1173000:intron | 40.0% | |
| !! | GCGGAAGTGTTAAAAACTCA+AGG | + | chr8_1:3198400-3198419 | Msa1173000:CDS | 40.0% |
| GATAGATATTGTGCGTGATG+TGG | - | chr8_1:3198512-3198531 | None:intergenic | 40.0% | |
| GCACAATATCTATCGAGTGT+GGG | + | chr8_1:3198518-3198537 | Msa1173000:CDS | 40.0% | |
| CAACAAGAAAAGCTAGAGGT+GGG | - | chr8_1:3198756-3198775 | None:intergenic | 40.0% | |
| ACAACAAGAAAAGCTAGAGG+TGG | - | chr8_1:3198757-3198776 | None:intergenic | 40.0% | |
| ATCTTCTGTAATTTGGCGGT+AGG | - | chr8_1:3198783-3198802 | None:intergenic | 40.0% | |
| ! | GAACTAAATTTCTGGGGAAG+GGG | + | chr8_1:3198866-3198885 | Msa1173000:intron | 40.0% |
| ! | TTTCCTTTTCTCGGTCTCTT+TGG | + | chr8_1:3199112-3199131 | Msa1173000:intron | 40.0% |
| AAACCAAAGAGACCGAGAAA+AGG | - | chr8_1:3199118-3199137 | None:intergenic | 40.0% | |
| TCTTTGTCATCAACGGGAAT+TGG | - | chr8_1:3199251-3199270 | None:intergenic | 40.0% | |
| AAGTCGTCTTTGTCATCAAC+GGG | - | chr8_1:3199257-3199276 | None:intergenic | 40.0% | |
| ATAATTCATAGGGCTTGCAG+TGG | - | chr8_1:3199311-3199330 | None:intergenic | 40.0% | |
| ATGCCCATGTAGCAACAAAA+AGG | + | chr8_1:3199486-3199505 | Msa1173000:three_prime_UTR | 40.0% | |
| TGCCCATGTAGCAACAAAAA+GGG | + | chr8_1:3199487-3199506 | Msa1173000:three_prime_UTR | 40.0% | |
| ! | GTCCCTTTTTGTTGCTACAT+GGG | - | chr8_1:3199492-3199511 | None:intergenic | 40.0% |
| ! | TGTCCCTTTTTGTTGCTACA+TGG | - | chr8_1:3199493-3199512 | None:intergenic | 40.0% |
| !! | ATTGGTCTTGTCTTGCATTG+TGG | + | chr8_1:3199586-3199605 | Msa1173000:three_prime_UTR | 40.0% |
| CTCTTCCAGCAATCTATCCA+TGG | + | chr8_1:3194135-3194154 | Msa1173000:exon | 45.0% | |
| ATTATACCTATCCACCTCGG+AGG | + | chr8_1:3194206-3194225 | Msa1173000:CDS | 45.0% | |
| TTAAGGATATTCCTCCGAGG+TGG | - | chr8_1:3194220-3194239 | None:intergenic | 45.0% | |
| TATACAAGCAATGGGCCTAG+TGG | + | chr8_1:3194640-3194659 | Msa1173000:intron | 45.0% | |
| ACCTGCATAATGCATACGGA+AGG | - | chr8_1:3194763-3194782 | None:intergenic | 45.0% | |
| ! | AACAGACTAGCCCTTCATAC+AGG | - | chr8_1:3194878-3194897 | None:intergenic | 45.0% |
| !! | CCAGGTATAGTCGGTGTTAT+GGG | - | chr8_1:3195046-3195065 | None:intergenic | 45.0% |
| !! | TCCAGGTATAGTCGGTGTTA+TGG | - | chr8_1:3195047-3195066 | None:intergenic | 45.0% |
| ATTCCGCTATGCTATAGTCC+AGG | - | chr8_1:3195064-3195083 | None:intergenic | 45.0% | |
| GCTATAGCATTGCCACATAG+CGG | + | chr8_1:3195143-3195162 | Msa1173000:intron | 45.0% | |
| GCATTAACAGTCGTGGATAG+TGG | - | chr8_1:3195191-3195210 | None:intergenic | 45.0% | |
| GAAAAAGCAATCTGAGCCTG+AGG | - | chr8_1:3195242-3195261 | None:intergenic | 45.0% | |
| !! | GTCCATAATCTTTGAGACGG+AGG | - | chr8_1:3195345-3195364 | None:intergenic | 45.0% |
| !! | GAGATGTTCCTGAAAGTGCT+GGG | + | chr8_1:3195781-3195800 | Msa1173000:CDS | 45.0% |
| !! | AGATGTTCCTGAAAGTGCTG+GGG | + | chr8_1:3195782-3195801 | Msa1173000:CDS | 45.0% |
| TACCCAAACGGGAAAAAGAG+TGG | - | chr8_1:3195844-3195863 | None:intergenic | 45.0% | |
| TTCCCGTTTGGGTAAGTCTA+AGG | + | chr8_1:3195850-3195869 | Msa1173000:intron | 45.0% | |
| AGCCTTAGACTTACCCAAAC+GGG | - | chr8_1:3195855-3195874 | None:intergenic | 45.0% | |
| TTGTATGCGCAGGTCATCTT+GGG | + | chr8_1:3195944-3195963 | Msa1173000:intron | 45.0% | |
| AAGACAGTTCTTACAGCAGC+TGG | - | chr8_1:3195992-3196011 | None:intergenic | 45.0% | |
| GGTTTCCTCATGCTGTCTAT+GGG | + | chr8_1:3196128-3196147 | Msa1173000:CDS | 45.0% | |
| TCAAACCCATAGACAGCATG+AGG | - | chr8_1:3196136-3196155 | None:intergenic | 45.0% | |
| TGTTTGTCCCTTACAGTCCA+CGG | - | chr8_1:3196197-3196216 | None:intergenic | 45.0% | |
| TATTTGATCAAGCCCGTGCT+AGG | + | chr8_1:3196311-3196330 | Msa1173000:CDS | 45.0% | |
| GCAATGAAAAAGCCTAGCAC+GGG | - | chr8_1:3196326-3196345 | None:intergenic | 45.0% | |
| AGTGCTTTGTACCTGGTTGT+AGG | + | chr8_1:3196533-3196552 | Msa1173000:intron | 45.0% | |
| !! | ATTTTGGTCTCGTGTTGTCC+TGG | + | chr8_1:3196880-3196899 | Msa1173000:CDS | 45.0% |
| TCAGCTTTGCGTGTTTGAAG+AGG | - | chr8_1:3197408-3197427 | None:intergenic | 45.0% | |
| GAACTTACAGCAGCATCAAC+AGG | - | chr8_1:3197687-3197706 | None:intergenic | 45.0% | |
| GTTGATGCTGCTGTAAGTTC+TGG | + | chr8_1:3197687-3197706 | Msa1173000:intron | 45.0% | |
| !!! | TCTTTCTCTTTTTCAGGGCC+TGG | + | chr8_1:3197955-3197974 | Msa1173000:intron | 45.0% |
| !! | CTTGAAAGGTGCTAATTGCC+AGG | - | chr8_1:3197976-3197995 | None:intergenic | 45.0% |
| TTAGTCCCTACAATTGTGGG+AGG | + | chr8_1:3198001-3198020 | Msa1173000:CDS | 45.0% | |
| !! | ATGTGTCTCCACTTGGTGTA+AGG | + | chr8_1:3198089-3198108 | Msa1173000:intron | 45.0% |
| !! | TCTCCACTTGGTGTAAGGTA+TGG | + | chr8_1:3198094-3198113 | Msa1173000:intron | 45.0% |
| GAACCATACCTTACACCAAG+TGG | - | chr8_1:3198100-3198119 | None:intergenic | 45.0% | |
| ATCACGGTCACACCTTTGAT+AGG | + | chr8_1:3198210-3198229 | Msa1173000:CDS | 45.0% | |
| AACTTACTGGGCTTGCACAA+AGG | - | chr8_1:3198254-3198273 | None:intergenic | 45.0% | |
| ATGCAGCAGCATGTAAAGCA+AGG | - | chr8_1:3198447-3198466 | None:intergenic | 45.0% | |
| !! | CATGCTGCTGCATTTGCTAT+TGG | + | chr8_1:3198454-3198473 | Msa1173000:CDS | 45.0% |
| CGCACAATATCTATCGAGTG+TGG | + | chr8_1:3198517-3198536 | Msa1173000:CDS | 45.0% | |
| TGCTAAGATGCCAACTCCAT+AGG | - | chr8_1:3198646-3198665 | None:intergenic | 45.0% | |
| CAGAAGGAACAGCTACAAGT+GGG | - | chr8_1:3199051-3199070 | None:intergenic | 45.0% | |
| ATTACTGCCGTAATGCAGCT+TGG | + | chr8_1:3199191-3199210 | Msa1173000:intron | 45.0% | |
| TTTGTTGCCACTCTTCACAC+TGG | - | chr8_1:3199462-3199481 | None:intergenic | 45.0% | |
| CCATGGTAGGATCCAATGAA+CGG | + | chr8_1:3199535-3199554 | Msa1173000:three_prime_UTR | 45.0% | |
| ! | CAATGGATTCGACCGTTCAT+TGG | - | chr8_1:3199550-3199569 | None:intergenic | 45.0% |
| ATGAACGGTCGAATCCATTG+CGG | + | chr8_1:3199550-3199569 | Msa1173000:three_prime_UTR | 45.0% | |
| !!! | TTTCTTTAATTTTTTTTTTT+TGG | + | chr8_1:3196353-3196372 | Msa1173000:intron | 5.0% |
| !! | AATAATATAATATAATTTCA+TGG | - | chr8_1:3199723-3199742 | None:intergenic | 5.0% |
| ! | GCATAGTAGTTTGCGAGTCC+AGG | + | chr8_1:3193866-3193885 | Msa1173000:five_prime_UTR | 50.0% |
| CTTACACTTTCAAGCCAGCC+TGG | - | chr8_1:3193887-3193906 | None:intergenic | 50.0% | |
| !! | CAGGCTGGCTTGAAAGTGTA+AGG | + | chr8_1:3193885-3193904 | Msa1173000:five_prime_UTR | 50.0% |
| GGAAGCCATGGATAGATTGC+TGG | - | chr8_1:3194143-3194162 | None:intergenic | 50.0% | |
| GATATTCCTCCGAGGTGGAT+AGG | - | chr8_1:3194215-3194234 | None:intergenic | 50.0% | |
| TCTCAGTAAGGCATGCCACT+AGG | - | chr8_1:3194658-3194677 | None:intergenic | 50.0% | |
| GCCTTCCGTATGCATTATGC+AGG | + | chr8_1:3194759-3194778 | Msa1173000:intron | 50.0% | |
| ! | GGAACAAGGGAAGAGTGCAT+TGG | + | chr8_1:3195002-3195021 | Msa1173000:intron | 50.0% |
| !! | AGTCGGTGTTATGGGAAGAG+TGG | - | chr8_1:3195038-3195057 | None:intergenic | 50.0% |
| ! | CCCATAACACCGACTATACC+TGG | + | chr8_1:3195043-3195062 | Msa1173000:intron | 50.0% |
| GCCCTCCGTCTCAAAGATTA+TGG | + | chr8_1:3195340-3195359 | Msa1173000:intron | 50.0% | |
| ! | GGAGATGTTCCTGAAAGTGC+TGG | + | chr8_1:3195780-3195799 | Msa1173000:CDS | 50.0% |
| !! | GATGTTCCTGAAAGTGCTGG+GGG | + | chr8_1:3195783-3195802 | Msa1173000:CDS | 50.0% |
| CTTGTATGCGCAGGTCATCT+TGG | + | chr8_1:3195943-3195962 | Msa1173000:intron | 50.0% | |
| TGTATGCGCAGGTCATCTTG+GGG | + | chr8_1:3195945-3195964 | Msa1173000:intron | 50.0% | |
| !! | CAGCTGGCTTGTAAATACCG+AGG | - | chr8_1:3195976-3195995 | None:intergenic | 50.0% |
| GGGTTTCCTCATGCTGTCTA+TGG | + | chr8_1:3196127-3196146 | Msa1173000:CDS | 50.0% | |
| ! | TGCGAAATCCGTGGACTGTA+AGG | + | chr8_1:3196186-3196205 | Msa1173000:intron | 50.0% |
| ! | GCGAAATCCGTGGACTGTAA+GGG | + | chr8_1:3196187-3196206 | Msa1173000:intron | 50.0% |
| !! | TGTGTTTTTGCAGGTGGGTG+TGG | + | chr8_1:3196274-3196293 | Msa1173000:intron | 50.0% |
| !! | GTGTTTTTGCAGGTGGGTGT+GGG | + | chr8_1:3196275-3196294 | Msa1173000:intron | 50.0% |
| !! | TGTTTTTGCAGGTGGGTGTG+GGG | + | chr8_1:3196276-3196295 | Msa1173000:intron | 50.0% |
| ! | CTAGTTGATGCACTGTGCTG+TGG | + | chr8_1:3196767-3196786 | Msa1173000:intron | 50.0% |
| ACATTTGATGCCTGACCTCC+AGG | - | chr8_1:3196901-3196920 | None:intergenic | 50.0% | |
| AGAGAGAGCAACGTTTCCCT+TGG | - | chr8_1:3196938-3196957 | None:intergenic | 50.0% | |
| GCTAGAAGCTTCGTTAGGAG+TGG | - | chr8_1:3197651-3197670 | None:intergenic | 50.0% | |
| CTCCTAACGAAGCTTCTAGC+TGG | + | chr8_1:3197651-3197670 | Msa1173000:CDS | 50.0% | |
| GACCAGCTAGAAGCTTCGTT+AGG | - | chr8_1:3197656-3197675 | None:intergenic | 50.0% | |
| TACTGGGCTTGCACAAAGGA+GGG | - | chr8_1:3198250-3198269 | None:intergenic | 50.0% | |
| TTACTGGGCTTGCACAAAGG+AGG | - | chr8_1:3198251-3198270 | None:intergenic | 50.0% | |
| ! | TTTTCAGATCGGGCAAGTCG+CGG | + | chr8_1:3198381-3198400 | Msa1173000:intron | 50.0% |
| GCAGCATGTAAAGCAAGGAC+TGG | - | chr8_1:3198442-3198461 | None:intergenic | 50.0% | |
| ATCTATCGAGTGTGGGATGC+AGG | + | chr8_1:3198525-3198544 | Msa1173000:CDS | 50.0% | |
| ! | GAGGTGGGTTCTCTTGGTAT+GGG | - | chr8_1:3198741-3198760 | None:intergenic | 50.0% |
| ! | AGAGGTGGGTTCTCTTGGTA+TGG | - | chr8_1:3198742-3198761 | None:intergenic | 50.0% |
| ! | AAGCTAGAGGTGGGTTCTCT+TGG | - | chr8_1:3198747-3198766 | None:intergenic | 50.0% |
| TGTTTGCAGAGCTCTGCACT+TGG | + | chr8_1:3198995-3199014 | Msa1173000:intron | 50.0% | |
| AGGAACAGCTACAAGTGGGT+TGG | - | chr8_1:3199047-3199066 | None:intergenic | 50.0% | |
| GCAGAAGGAACAGCTACAAG+TGG | - | chr8_1:3199052-3199071 | None:intergenic | 50.0% | |
| CAGACAACACTGACAGCAGA+AGG | - | chr8_1:3199067-3199086 | None:intergenic | 50.0% | |
| TGCTGTCAGTGTTGTCTGCA+TGG | + | chr8_1:3199069-3199088 | Msa1173000:CDS | 50.0% | |
| TGTCAGTGTTGTCTGCATGG+CGG | + | chr8_1:3199072-3199091 | Msa1173000:CDS | 50.0% | |
| TGTCTGCATGGCGGTAAGAT+AGG | + | chr8_1:3199081-3199100 | Msa1173000:intron | 50.0% | |
| ACTCCCACCAAGCTGCATTA+CGG | - | chr8_1:3199201-3199220 | None:intergenic | 50.0% | |
| ! | GGAGTGCTCTAGCTGTGTAT+TGG | + | chr8_1:3199216-3199235 | Msa1173000:CDS | 50.0% |
| GTGCTCTAGCTGTGTATTGG+AGG | + | chr8_1:3199219-3199238 | Msa1173000:CDS | 50.0% | |
| TAGCTACTGAGCTCTTGCCA+TGG | + | chr8_1:3199518-3199537 | Msa1173000:three_prime_UTR | 50.0% | |
| TACTGAGCTCTTGCCATGGT+AGG | + | chr8_1:3199522-3199541 | Msa1173000:three_prime_UTR | 50.0% | |
| CCGTTCATTGGATCCTACCA+TGG | - | chr8_1:3199538-3199557 | None:intergenic | 50.0% | |
| ! | AGTAGTTTGCGAGTCCAGGC+TGG | + | chr8_1:3193870-3193889 | Msa1173000:five_prime_UTR | 55.0% |
| AACTCTGGGCATGGAAGCCA+TGG | - | chr8_1:3194155-3194174 | None:intergenic | 55.0% | |
| GAAACTGACGCACGCCATCT+TGG | - | chr8_1:3194562-3194581 | None:intergenic | 55.0% | |
| GTATGCGCAGGTCATCTTGG+GGG | + | chr8_1:3195946-3195965 | Msa1173000:intron | 55.0% | |
| GACGATGTCTGCGAAATCCG+TGG | + | chr8_1:3196177-3196196 | Msa1173000:CDS | 55.0% | |
| CTTTCGGCTCCTCTTGCAAC+TGG | + | chr8_1:3196853-3196872 | Msa1173000:CDS | 55.0% | |
| TTGGTCTCGTGTTGTCCTGG+AGG | + | chr8_1:3196883-3196902 | Msa1173000:CDS | 55.0% | |
| ACTGCCGTAATGCAGCTTGG+TGG | + | chr8_1:3199194-3199213 | Msa1173000:intron | 55.0% | |
| CTGCCGTAATGCAGCTTGGT+GGG | + | chr8_1:3199195-3199214 | Msa1173000:intron | 55.0% | |
| GGCAAGAGCTCAGTAGCTAG+AGG | - | chr8_1:3199517-3199536 | None:intergenic | 55.0% | |
| GGCGTGCGTCAGTTTCGTGT+TGG | + | chr8_1:3194566-3194585 | Msa1173000:intron | 60.0% | |
| GTCATCTTGGGGGCTCTCCT+CGG | + | chr8_1:3195956-3195975 | Msa1173000:CDS | 60.0% | |
| CTCGTGTTGTCCTGGAGGTC+AGG | + | chr8_1:3196888-3196907 | Msa1173000:CDS | 60.0% | |
| CAGCTGTGCCGTGTTATCCC+TGG | + | chr8_1:3197473-3197492 | Msa1173000:intron | 60.0% | |
| TGGGCTTGCACAAAGGAGGG+TGG | - | chr8_1:3198247-3198266 | None:intergenic | 60.0% | |
| CTCAGGCCCCCAGCACTTTC+AGG | - | chr8_1:3195792-3195811 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 3193824 | 3199749 | 3193824 | ID=Msa1173000;Name=Msa1173000 |
| chr8_1 | mRNA | 3193824 | 3199749 | 3193824 | ID=Msa1173000-mRNA-1;Parent=Msa1173000;Name=Msa1173000-mRNA-1;_AED=0.06;_eAED=0.06;_QI=330|1|1|1|1|1|13|463|410 |
| chr8_1 | exon | 3193824 | 3194250 | 3193824 | ID=Msa1173000-mRNA-1:exon:1132;Parent=Msa1173000-mRNA-1 |
| chr8_1 | exon | 3194359 | 3194467 | 3194359 | ID=Msa1173000-mRNA-1:exon:1133;Parent=Msa1173000-mRNA-1 |
| chr8_1 | exon | 3195740 | 3195860 | 3195740 | ID=Msa1173000-mRNA-1:exon:1134;Parent=Msa1173000-mRNA-1 |
| chr8_1 | exon | 3195956 | 3195997 | 3195956 | ID=Msa1173000-mRNA-1:exon:1135;Parent=Msa1173000-mRNA-1 |
| chr8_1 | exon | 3196089 | 3196202 | 3196089 | ID=Msa1173000-mRNA-1:exon:1136;Parent=Msa1173000-mRNA-1 |
| chr8_1 | exon | 3196287 | 3196349 | 3196287 | ID=Msa1173000-mRNA-1:exon:1137;Parent=Msa1173000-mRNA-1 |
| chr8_1 | exon | 3196844 | 3196971 | 3196844 | ID=Msa1173000-mRNA-1:exon:1138;Parent=Msa1173000-mRNA-1 |
| chr8_1 | exon | 3197617 | 3197698 | 3197617 | ID=Msa1173000-mRNA-1:exon:1139;Parent=Msa1173000-mRNA-1 |
| chr8_1 | exon | 3197971 | 3198022 | 3197971 | ID=Msa1173000-mRNA-1:exon:1140;Parent=Msa1173000-mRNA-1 |
| chr8_1 | exon | 3198169 | 3198266 | 3198169 | ID=Msa1173000-mRNA-1:exon:1141;Parent=Msa1173000-mRNA-1 |
| chr8_1 | exon | 3198388 | 3198546 | 3198388 | ID=Msa1173000-mRNA-1:exon:1142;Parent=Msa1173000-mRNA-1 |
| chr8_1 | exon | 3199004 | 3199093 | 3199004 | ID=Msa1173000-mRNA-1:exon:1143;Parent=Msa1173000-mRNA-1 |
| chr8_1 | exon | 3199209 | 3199749 | 3199209 | ID=Msa1173000-mRNA-1:exon:1144;Parent=Msa1173000-mRNA-1 |
| chr8_1 | five_prime_UTR | 3193824 | 3194153 | 3193824 | ID=Msa1173000-mRNA-1:five_prime_utr;Parent=Msa1173000-mRNA-1 |
| chr8_1 | CDS | 3194154 | 3194250 | 3194154 | ID=Msa1173000-mRNA-1:cds;Parent=Msa1173000-mRNA-1 |
| chr8_1 | CDS | 3194359 | 3194467 | 3194359 | ID=Msa1173000-mRNA-1:cds;Parent=Msa1173000-mRNA-1 |
| chr8_1 | CDS | 3195740 | 3195860 | 3195740 | ID=Msa1173000-mRNA-1:cds;Parent=Msa1173000-mRNA-1 |
| chr8_1 | CDS | 3195956 | 3195997 | 3195956 | ID=Msa1173000-mRNA-1:cds;Parent=Msa1173000-mRNA-1 |
| chr8_1 | CDS | 3196089 | 3196202 | 3196089 | ID=Msa1173000-mRNA-1:cds;Parent=Msa1173000-mRNA-1 |
| chr8_1 | CDS | 3196287 | 3196349 | 3196287 | ID=Msa1173000-mRNA-1:cds;Parent=Msa1173000-mRNA-1 |
| chr8_1 | CDS | 3196844 | 3196971 | 3196844 | ID=Msa1173000-mRNA-1:cds;Parent=Msa1173000-mRNA-1 |
| chr8_1 | CDS | 3197617 | 3197698 | 3197617 | ID=Msa1173000-mRNA-1:cds;Parent=Msa1173000-mRNA-1 |
| chr8_1 | CDS | 3197971 | 3198022 | 3197971 | ID=Msa1173000-mRNA-1:cds;Parent=Msa1173000-mRNA-1 |
| chr8_1 | CDS | 3198169 | 3198266 | 3198169 | ID=Msa1173000-mRNA-1:cds;Parent=Msa1173000-mRNA-1 |
| chr8_1 | CDS | 3198388 | 3198546 | 3198388 | ID=Msa1173000-mRNA-1:cds;Parent=Msa1173000-mRNA-1 |
| chr8_1 | CDS | 3199004 | 3199093 | 3199004 | ID=Msa1173000-mRNA-1:cds;Parent=Msa1173000-mRNA-1 |
| chr8_1 | CDS | 3199209 | 3199286 | 3199209 | ID=Msa1173000-mRNA-1:cds;Parent=Msa1173000-mRNA-1 |
| chr8_1 | three_prime_UTR | 3199287 | 3199749 | 3199287 | ID=Msa1173000-mRNA-1:three_prime_utr;Parent=Msa1173000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
