Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1275430 | XP_003627097.1 | 98.785 | 576 | 7 | 0 | 1 | 576 | 1 | 576 | 0.0 | 1147 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1275430 | sp|Q93ZM7|CH60C_ARATH | 80.435 | 552 | 106 | 2 | 20 | 571 | 18 | 567 | 0.0 | 911 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1275430 | G7LHF7 | 98.785 | 576 | 7 | 0 | 1 | 576 | 1 | 576 | 0.0 | 1147 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0032580 | Msa1275430 | 0.802912 | 4.479715e-49 | -8.615850e-47 |
Msa0043660 | Msa1275430 | 0.811660 | 6.265423e-51 | -8.615850e-47 |
Msa0074320 | Msa1275430 | 0.820721 | 5.904240e-53 | -8.615850e-47 |
Msa0079820 | Msa1275430 | 0.817435 | 3.301868e-52 | -8.615850e-47 |
Msa0689260 | Msa1275430 | 0.800281 | 1.551052e-48 | -8.615850e-47 |
Msa0719420 | Msa1275430 | 0.800206 | 1.606495e-48 | -8.615850e-47 |
Msa0789680 | Msa1275430 | 0.804630 | 1.970355e-49 | -8.615850e-47 |
Msa0127390 | Msa1275430 | 0.801048 | 1.081945e-48 | -8.615850e-47 |
Msa0137550 | Msa1275430 | 0.817877 | 2.625895e-52 | -8.615850e-47 |
Msa0172970 | Msa1275430 | 0.800677 | 1.288290e-48 | -8.615850e-47 |
Msa0187690 | Msa1275430 | 0.822161 | 2.746653e-53 | -8.615850e-47 |
Msa0220720 | Msa1275430 | 0.802556 | 5.304137e-49 | -8.615850e-47 |
Msa1275430 | Msa1358250 | 0.801974 | 6.987971e-49 | -8.615850e-47 |
Msa1275430 | Msa1363330 | 0.800093 | 1.694097e-48 | -8.615850e-47 |
Msa1275430 | Msa1386600 | 0.800184 | 1.623649e-48 | -8.615850e-47 |
Msa1275430 | Msa1394290 | 0.808849 | 2.530343e-50 | -8.615850e-47 |
Msa0402650 | Msa1275430 | 0.823844 | 1.113080e-53 | -8.615850e-47 |
Msa0449210 | Msa1275430 | 0.800050 | 1.728406e-48 | -8.615850e-47 |
Msa0989540 | Msa1275430 | 0.829616 | 4.659058e-55 | -8.615850e-47 |
Msa1104140 | Msa1275430 | 0.820830 | 5.573907e-53 | -8.615850e-47 |
Msa1106700 | Msa1275430 | 0.802604 | 5.185640e-49 | -8.615850e-47 |
Msa1193070 | Msa1275430 | 0.800441 | 1.439356e-48 | -8.615850e-47 |
Msa0497490 | Msa1275430 | 0.800852 | 1.186341e-48 | -8.615850e-47 |
Msa0576940 | Msa1275430 | 0.804095 | 2.545912e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1275430 | MtrunA17_Chr8g0342341 | 98.785 | 576 | 7 | 0 | 1 | 576 | 1 | 576 | 0.0 | 1147 |
Msa1275430 | MtrunA17_Chr1g0196761 | 70.312 | 576 | 169 | 2 | 1 | 576 | 1 | 574 | 0.0 | 812 |
Msa1275430 | MtrunA17_Chr1g0196751 | 69.982 | 563 | 167 | 2 | 1 | 563 | 1 | 561 | 0.0 | 788 |
Msa1275430 | MtrunA17_Chr1g0152141 | 43.186 | 565 | 302 | 7 | 16 | 575 | 35 | 585 | 2.29e-150 | 445 |
Msa1275430 | MtrunA17_Chr1g0152151 | 43.985 | 532 | 286 | 4 | 48 | 575 | 62 | 585 | 2.00e-149 | 442 |
Msa1275430 | MtrunA17_Chr4g0028601 | 42.938 | 531 | 295 | 4 | 36 | 564 | 50 | 574 | 2.78e-141 | 421 |
Msa1275430 | MtrunA17_Chr4g0043731 | 38.619 | 536 | 322 | 4 | 36 | 569 | 42 | 572 | 9.03e-123 | 374 |
Msa1275430 | MtrunA17_Chr5g0421251 | 39.802 | 505 | 292 | 6 | 4 | 502 | 9 | 507 | 4.26e-121 | 367 |
Msa1275430 | MtrunA17_Chr7g0272821 | 23.889 | 540 | 332 | 17 | 41 | 547 | 16 | 509 | 8.40e-13 | 70.9 |
Msa1275430 | MtrunA17_Chr7g0241881 | 23.704 | 540 | 333 | 17 | 41 | 547 | 16 | 509 | 1.72e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1275430 | AT3G13860.1 | 80.435 | 552 | 106 | 2 | 20 | 571 | 18 | 567 | 0.0 | 911 |
Msa1275430 | AT3G23990.1 | 70.693 | 563 | 163 | 1 | 1 | 563 | 1 | 561 | 0.0 | 795 |
Msa1275430 | AT2G33210.1 | 69.245 | 556 | 170 | 1 | 1 | 556 | 1 | 555 | 0.0 | 764 |
Msa1275430 | AT2G33210.2 | 68.705 | 556 | 168 | 2 | 1 | 556 | 1 | 550 | 0.0 | 749 |
Msa1275430 | AT3G13470.1 | 44.423 | 529 | 282 | 5 | 51 | 575 | 70 | 590 | 1.53e-146 | 436 |
Msa1275430 | AT1G55490.5 | 43.126 | 531 | 291 | 4 | 51 | 576 | 74 | 598 | 2.56e-146 | 435 |
Msa1275430 | AT1G55490.1 | 43.126 | 531 | 291 | 4 | 51 | 576 | 74 | 598 | 2.56e-146 | 435 |
Msa1275430 | AT1G55490.3 | 43.126 | 531 | 291 | 4 | 51 | 576 | 74 | 598 | 2.56e-146 | 435 |
Msa1275430 | AT1G55490.4 | 43.126 | 531 | 291 | 4 | 51 | 576 | 74 | 598 | 2.56e-146 | 435 |
Msa1275430 | AT1G55490.2 | 43.126 | 531 | 291 | 4 | 51 | 576 | 74 | 598 | 2.56e-146 | 435 |
Msa1275430 | AT5G56500.2 | 42.096 | 563 | 320 | 6 | 18 | 576 | 35 | 595 | 3.64e-146 | 435 |
Msa1275430 | AT5G56500.1 | 42.096 | 563 | 320 | 6 | 18 | 576 | 35 | 595 | 3.64e-146 | 435 |
Msa1275430 | AT2G28000.1 | 42.007 | 538 | 305 | 4 | 24 | 556 | 34 | 569 | 2.03e-139 | 417 |
Msa1275430 | AT1G26230.1 | 40.111 | 541 | 319 | 5 | 28 | 564 | 33 | 572 | 7.46e-135 | 406 |
Msa1275430 | AT1G26230.4 | 40.698 | 516 | 303 | 3 | 51 | 564 | 6 | 520 | 2.32e-134 | 403 |
Msa1275430 | AT1G26230.3 | 40.820 | 512 | 300 | 3 | 55 | 564 | 2 | 512 | 3.70e-134 | 402 |
Msa1275430 | AT1G26230.2 | 39.958 | 478 | 282 | 5 | 28 | 501 | 33 | 509 | 6.42e-118 | 360 |
Msa1275430 | AT5G18820.1 | 36.617 | 538 | 334 | 4 | 36 | 569 | 36 | 570 | 7.05e-113 | 348 |
Msa1275430 | AT1G26230.5 | 39.416 | 411 | 246 | 3 | 28 | 436 | 33 | 442 | 7.51e-104 | 322 |
Msa1275430 | AT5G18820.2 | 35.699 | 465 | 293 | 3 | 109 | 569 | 2 | 464 | 5.39e-93 | 293 |
Msa1275430 | AT5G18820.3 | 34.921 | 378 | 245 | 1 | 36 | 413 | 36 | 412 | 2.32e-74 | 244 |
Msa1275430 | AT5G20890.1 | 23.660 | 541 | 332 | 21 | 41 | 547 | 16 | 509 | 9.74e-11 | 65.1 |
Find 167 sgRNAs with CRISPR-Local
Find 604 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCTTTGAATTTGATACTTT+TGG | 0.164986 | 8_3:-9365226 | None:intergenic |
GCTATAAAAGCTCCTGGTTT+TGG | 0.212262 | 8_3:+9369900 | Msa1275430:CDS |
GATGATCTTGCAATTCTTAC+TGG | 0.214227 | 8_3:+9369945 | Msa1275430:CDS |
TTCTTGTGTTACAGAAATTA+TGG | 0.223410 | 8_3:-9372266 | None:intergenic |
TGCACCTGGGTTATTTCTTC+TGG | 0.223943 | 8_3:-9366907 | None:intergenic |
AAAATTCTTATTCTATTGTT+TGG | 0.226689 | 8_3:+9372384 | Msa1275430:three_prime_UTR |
TTTGCAGTGCCAAGCATTTC+AGG | 0.236702 | 8_3:-9370104 | None:intergenic |
CAAATTCTTGTTTCATGGTT+TGG | 0.238304 | 8_3:+9372428 | Msa1275430:three_prime_UTR |
TAAAACTTGTCCCATTCTTT+AGG | 0.262033 | 8_3:+9372225 | Msa1275430:three_prime_UTR |
GCTGTTCTAACAACTTTAAC+AGG | 0.285162 | 8_3:-9371803 | None:intergenic |
ATCCATATCTGGCACCCTTT+GGG | 0.321185 | 8_3:-9372004 | None:intergenic |
AATTGAAGAAGAAGCAAATA+GGG | 0.322317 | 8_3:-9363961 | None:intergenic |
GCAAATGGGGAGCGTGATAT+TGG | 0.324943 | 8_3:+9367202 | Msa1275430:CDS |
GAAAGCAAATTCTTGTTTCA+TGG | 0.325528 | 8_3:+9372423 | Msa1275430:three_prime_UTR |
GAATTGAAGAAGAAGCAAAT+AGG | 0.335540 | 8_3:-9363962 | None:intergenic |
TTCTGATCAGTAATAAAATA+AGG | 0.341376 | 8_3:-9367434 | None:intergenic |
CCAACAATTTGCTGTGAACT+AGG | 0.341402 | 8_3:-9371540 | None:intergenic |
AATAGGAACCTATGTTGATA+TGG | 0.341448 | 8_3:+9371760 | Msa1275430:intron |
GGTGCCAGATATGGATGATT+TGG | 0.346566 | 8_3:+9372011 | Msa1275430:CDS |
AAATTCTTATTCTATTGTTT+GGG | 0.359844 | 8_3:+9372385 | Msa1275430:three_prime_UTR |
CATCCATATCTGGCACCCTT+TGG | 0.368091 | 8_3:-9372005 | None:intergenic |
CAAGCACCATGCTGGGCTTA+AGG | 0.369151 | 8_3:+9368250 | Msa1275430:CDS |
TCCCCAAAGGGTGCCAGATA+TGG | 0.373756 | 8_3:+9372002 | Msa1275430:CDS |
AAGTTGGGGAAAGGAAAGAT+AGG | 0.377892 | 8_3:+9370736 | Msa1275430:CDS |
AAGATATCAACTTTGGAGTT+GGG | 0.378560 | 8_3:+9364325 | Msa1275430:CDS |
TTGTCATGGATGAGGATAAA+GGG | 0.383754 | 8_3:-9368016 | None:intergenic |
AACGGTAAATTGTGAAGGTT+AGG | 0.384473 | 8_3:-9364008 | None:intergenic |
TTTGAAATTTACAATTATAT+GGG | 0.393542 | 8_3:+9363838 | Msa1275430:five_prime_UTR |
TAGTCCAAATCATCCATATC+TGG | 0.396497 | 8_3:-9372015 | None:intergenic |
GTGGAGGAGGGTATTGTTCC+AGG | 0.402426 | 8_3:+9370792 | Msa1275430:CDS |
ACAGCTCCAATACTTTCAAC+AGG | 0.404751 | 8_3:-9368060 | None:intergenic |
GTTGGTACTATATCTGCAAA+TGG | 0.407082 | 8_3:+9367187 | Msa1275430:CDS |
ATATGGGCCAACCATCAAAA+AGG | 0.407673 | 8_3:+9363854 | Msa1275430:five_prime_UTR |
ATATAATTGTAAATTTCAAA+AGG | 0.410479 | 8_3:-9363835 | None:intergenic |
CTTTCATCGTTTGTTGAAGC+AGG | 0.419167 | 8_3:-9372042 | None:intergenic |
TTCAAGTTATCATAATCAAT+AGG | 0.426602 | 8_3:+9372195 | Msa1275430:three_prime_UTR |
CCTAGTTCACAGCAAATTGT+TGG | 0.426957 | 8_3:+9371540 | Msa1275430:CDS |
CTTGTCATGGATGAGGATAA+AGG | 0.431846 | 8_3:-9368017 | None:intergenic |
GCTCGTGCTGCTATGCTTCA+AGG | 0.432226 | 8_3:+9364348 | Msa1275430:CDS |
AATGAGTTGGAAGTAGTAGA+AGG | 0.432686 | 8_3:+9367383 | Msa1275430:CDS |
AAAGATATCAACTTTGGAGT+TGG | 0.437750 | 8_3:+9364324 | Msa1275430:CDS |
GTGACTAAAGATATCAACTT+TGG | 0.438297 | 8_3:+9364318 | Msa1275430:CDS |
TTGGTACTATATCTGCAAAT+GGG | 0.441996 | 8_3:+9367188 | Msa1275430:CDS |
ACTCAGGCAATACTCATAGA+AGG | 0.449520 | 8_3:+9366772 | Msa1275430:CDS |
TAAAGTTGTTAGAACAGCTT+TGG | 0.451306 | 8_3:+9371808 | Msa1275430:CDS |
ATGGAGAAAGTTGGGAAGGA+AGG | 0.451870 | 8_3:+9367244 | Msa1275430:CDS |
AGCCTACGATTCAATGTCAT+AGG | 0.456235 | 8_3:+9372156 | Msa1275430:three_prime_UTR |
GGGTTCCCTGTTGAAAGTAT+TGG | 0.460700 | 8_3:+9368054 | Msa1275430:CDS |
GATGAATGACACCTAAAGAA+TGG | 0.465287 | 8_3:-9372236 | None:intergenic |
AAGCTGCTAAAGTTTAAACT+TGG | 0.470129 | 8_3:+9372098 | Msa1275430:three_prime_UTR |
TATACAATAGCTTCAAATGC+TGG | 0.470880 | 8_3:+9371505 | Msa1275430:CDS |
CTCCTCCACAGCTGCTCTAG+TGG | 0.472284 | 8_3:-9370778 | None:intergenic |
GGTTCTAGTGAGGCAGAAGT+TGG | 0.475593 | 8_3:+9370720 | Msa1275430:CDS |
CACTAGAGCAGCTGTGGAGG+AGG | 0.478283 | 8_3:+9370779 | Msa1275430:CDS |
TTTAGAGAGAGTTAGAGAAA+GGG | 0.479007 | 8_3:-9363937 | None:intergenic |
TGAGATAAAATAGAATGGAT+TGG | 0.480834 | 8_3:-9372499 | None:intergenic |
CTTATATGCTAGCAAAGTCT+TGG | 0.482023 | 8_3:+9371297 | Msa1275430:CDS |
CAAGGGCAATGGAGAAAGTT+GGG | 0.484207 | 8_3:+9367236 | Msa1275430:CDS |
GCAAGGGCAATGGAGAAAGT+TGG | 0.486466 | 8_3:+9367235 | Msa1275430:CDS |
GTTCTAGTGAGGCAGAAGTT+GGG | 0.487173 | 8_3:+9370721 | Msa1275430:CDS |
ATGAATGACACCTAAAGAAT+GGG | 0.489044 | 8_3:-9372235 | None:intergenic |
TACTCAACAAGCACCATGCT+GGG | 0.491635 | 8_3:+9368243 | Msa1275430:CDS |
TATTGAAGAGAGATGTGTCC+AGG | 0.496846 | 8_3:+9370264 | Msa1275430:CDS |
TGAAATGAGATAAAATAGAA+TGG | 0.499517 | 8_3:-9372504 | None:intergenic |
AGCTGCTAAAGTTTAAACTT+GGG | 0.504128 | 8_3:+9372099 | Msa1275430:three_prime_UTR |
TAGAACAATAGTGTCATCAA+TGG | 0.505676 | 8_3:-9370218 | None:intergenic |
GTTTGTGCTATAAAAGCTCC+TGG | 0.509754 | 8_3:+9369894 | Msa1275430:CDS |
ATAATGGGGCATTGTTAAGA+AGG | 0.512237 | 8_3:+9364289 | Msa1275430:CDS |
TGCTGCTGGTGTTAATGTCA+TGG | 0.513591 | 8_3:+9366807 | Msa1275430:CDS |
AGAAAAGCCACAGGAACCCT+AGG | 0.514095 | 8_3:+9365178 | Msa1275430:CDS |
GCATACCTCTCGACAAAGTC+CGG | 0.514225 | 8_3:+9370081 | Msa1275430:CDS |
TATAATTGTAAATTTCAAAA+GGG | 0.516624 | 8_3:-9363834 | None:intergenic |
TCTCATCAAGCAGGTGGCTA+AGG | 0.519392 | 8_3:+9365272 | Msa1275430:CDS |
GAACGGCTGTCAAAACTCTC+TGG | 0.523828 | 8_3:+9370579 | Msa1275430:CDS |
ATACTCAACAAGCACCATGC+TGG | 0.525593 | 8_3:+9368242 | Msa1275430:CDS |
TGCGACATTCGATAAAGAAA+AGG | 0.527231 | 8_3:+9370551 | Msa1275430:CDS |
CACCATCCTTTGTGACCCTA+GGG | 0.529717 | 8_3:-9365194 | None:intergenic |
CCACATCTTCCGCAACAACT+AGG | 0.531567 | 8_3:-9368196 | None:intergenic |
ACACCATCCTTTGTGACCCT+AGG | 0.532143 | 8_3:-9365195 | None:intergenic |
CAGCTTTGGTAGATGCTGCC+AGG | 0.535337 | 8_3:+9371822 | Msa1275430:CDS |
AAAGTCCGGCCTGAAATGCT+TGG | 0.538799 | 8_3:+9370095 | Msa1275430:CDS |
TCCATATCTGGCACCCTTTG+GGG | 0.540298 | 8_3:-9372003 | None:intergenic |
AGATATCAACTTTGGAGTTG+GGG | 0.541204 | 8_3:+9364326 | Msa1275430:CDS |
TTGTGACCCTAGGGTTCCTG+TGG | 0.542107 | 8_3:-9365185 | None:intergenic |
AGGTGTTTCTGAGGTTGCTG+AGG | 0.542168 | 8_3:+9364368 | Msa1275430:CDS |
AACCCTAGGGTCACAAAGGA+TGG | 0.542541 | 8_3:+9365192 | Msa1275430:CDS |
AGTTGGGGAAAGGAAAGATA+GGG | 0.546516 | 8_3:+9370737 | Msa1275430:CDS |
CTATTGTTCTACATGGTGGT+GGG | 0.547062 | 8_3:+9370230 | Msa1275430:CDS |
TTTGAAGCTATTGTATATGT+TGG | 0.547605 | 8_3:-9371499 | None:intergenic |
TATGTTGATATGGTGAAGGC+TGG | 0.547684 | 8_3:+9371770 | Msa1275430:CDS |
GAGTATTGCCTGAGTCAAAA+CGG | 0.549575 | 8_3:-9366764 | None:intergenic |
CAACAATTTGCTGTGAACTA+GGG | 0.551192 | 8_3:-9371539 | None:intergenic |
ATATCTGGCACCCTTTGGGG+AGG | 0.553447 | 8_3:-9372000 | None:intergenic |
ATTCTCCACAATAGATGCCT+CGG | 0.555291 | 8_3:-9371959 | None:intergenic |
GATTATTCAGAATGCACTCA+AGG | 0.557505 | 8_3:+9371363 | Msa1275430:CDS |
AATGGACTAGAGCAGCGTAA+TGG | 0.557991 | 8_3:+9372353 | Msa1275430:three_prime_UTR |
GAACACTATGGATAATGAGT+TGG | 0.558978 | 8_3:+9367370 | Msa1275430:CDS |
CAAGAATAAACCTCCCCAAA+GGG | 0.559230 | 8_3:+9371990 | Msa1275430:CDS |
CTTCTATTGTCCCCAAAACC+AGG | 0.560588 | 8_3:-9369912 | None:intergenic |
TGGTGCTGATCTCATCAAGC+AGG | 0.560637 | 8_3:+9365263 | Msa1275430:CDS |
ACGGTAAATTGTGAAGGTTA+GGG | 0.560969 | 8_3:-9364007 | None:intergenic |
GTGTTAATGTCATGGATTTG+CGG | 0.562778 | 8_3:+9366815 | Msa1275430:CDS |
TCCCTATGACATTGAATCGT+AGG | 0.565565 | 8_3:-9372158 | None:intergenic |
TTCTAGTGAGGCAGAAGTTG+GGG | 0.566055 | 8_3:+9370722 | Msa1275430:CDS |
AATGTCATGGATTTGCGGAA+TGG | 0.568771 | 8_3:+9366820 | Msa1275430:CDS |
AAGGCTACCAACAGTACTGC+AGG | 0.569230 | 8_3:+9365291 | Msa1275430:CDS |
TATGCTTCAAGGTGTTTCTG+AGG | 0.569578 | 8_3:+9364359 | Msa1275430:CDS |
GACAACCGAGGCATCTATTG+TGG | 0.569813 | 8_3:+9371954 | Msa1275430:CDS |
CCTAGTTGTTGCGGAAGATG+TGG | 0.574519 | 8_3:+9368196 | Msa1275430:CDS |
TGCAATTCTTACTGGAGGAG+AGG | 0.576630 | 8_3:+9369953 | Msa1275430:CDS |
CAGTGCCAAGCATTTCAGGC+CGG | 0.577629 | 8_3:-9370100 | None:intergenic |
AGACAATACCTTGGGTCCCA+TGG | 0.579999 | 8_3:-9364403 | None:intergenic |
ACCGTCTCCTGCAGTACTGT+TGG | 0.580461 | 8_3:-9365298 | None:intergenic |
CTGCTAAAGTTTAAACTTGG+GGG | 0.580607 | 8_3:+9372101 | Msa1275430:three_prime_UTR |
TGACAAGAAAATTTCAGACA+TGG | 0.583948 | 8_3:+9368033 | Msa1275430:CDS |
AGCCTTCACCATATCAACAT+AGG | 0.586703 | 8_3:-9371768 | None:intergenic |
ACTATTGTTCTACATGGTGG+TGG | 0.587063 | 8_3:+9370229 | Msa1275430:CDS |
GACAAGAAAATTTCAGACAT+GGG | 0.587795 | 8_3:+9368034 | Msa1275430:CDS |
TGCCACTAGAGCAGCTGTGG+AGG | 0.588294 | 8_3:+9370776 | Msa1275430:CDS |
GCTGCTAAAGTTTAAACTTG+GGG | 0.588647 | 8_3:+9372100 | Msa1275430:three_prime_UTR |
CAAAGTTACCATGGGACCCA+AGG | 0.590322 | 8_3:+9364395 | Msa1275430:CDS |
GCCTACGATTCAATGTCATA+GGG | 0.594245 | 8_3:+9372157 | Msa1275430:three_prime_UTR |
GGATGCAAATCAGTTGCTGC+TGG | 0.595943 | 8_3:+9366793 | Msa1275430:CDS |
TGCTAAAGTTTAAACTTGGG+GGG | 0.599616 | 8_3:+9372102 | Msa1275430:three_prime_UTR |
ACCAACAGTACTGCAGGAGA+CGG | 0.602314 | 8_3:+9365297 | Msa1275430:CDS |
TATTGTTCTACATGGTGGTG+GGG | 0.603291 | 8_3:+9370231 | Msa1275430:CDS |
GGCAATGGAGAAAGTTGGGA+AGG | 0.606230 | 8_3:+9367240 | Msa1275430:CDS |
ACAGCAACGGTAAATTGTGA+AGG | 0.606447 | 8_3:-9364013 | None:intergenic |
AGATGTGGACAGTGATGCAT+TGG | 0.607738 | 8_3:+9368211 | Msa1275430:CDS |
AGAATTGATAGCAAGGGCAA+TGG | 0.608252 | 8_3:+9367225 | Msa1275430:CDS |
GAATGCCACTAGAGCAGCTG+TGG | 0.609502 | 8_3:+9370773 | Msa1275430:CDS |
TGTCATGGATGAGGATAAAG+GGG | 0.609505 | 8_3:-9368015 | None:intergenic |
ACAAGAATAAACCTCCCCAA+AGG | 0.612403 | 8_3:+9371989 | Msa1275430:CDS |
TCTAAACATCTACAGGTTGG+TGG | 0.612686 | 8_3:+9370699 | Msa1275430:intron |
TTACAGAAATTATGGTACAA+AGG | 0.613804 | 8_3:-9372258 | None:intergenic |
ACTAGAGCAGCTGTGGAGGA+GGG | 0.618745 | 8_3:+9370780 | Msa1275430:CDS |
AAGACCACTCCTAGTTGTTG+CGG | 0.619692 | 8_3:+9368187 | Msa1275430:CDS |
TATTGGAGAATTGATAGCAA+GGG | 0.622634 | 8_3:+9367219 | Msa1275430:CDS |
TGAGGCTGTCAAAGTTACCA+TGG | 0.624076 | 8_3:+9364386 | Msa1275430:CDS |
TGGTACTATATCTGCAAATG+GGG | 0.624150 | 8_3:+9367189 | Msa1275430:CDS |
AGTATTGGAGCTGTCAGTAA+CGG | 0.624634 | 8_3:+9368069 | Msa1275430:CDS |
AATAGTGTCATCAATGGAGA+CGG | 0.627637 | 8_3:-9370212 | None:intergenic |
GAGGCTGTCAAAGTTACCAT+GGG | 0.627770 | 8_3:+9364387 | Msa1275430:CDS |
GTGAGGCAGAAGTTGGGGAA+AGG | 0.628847 | 8_3:+9370727 | Msa1275430:CDS |
TGATAATTGAGAAAAGCCAC+AGG | 0.639955 | 8_3:+9365169 | Msa1275430:CDS |
ATAAAGAAAAGGCACAGGAA+CGG | 0.640741 | 8_3:+9370562 | Msa1275430:CDS |
TGCTGATCTCATCAAGCAGG+TGG | 0.640976 | 8_3:+9365266 | Msa1275430:CDS |
GAAAAGCCACAGGAACCCTA+GGG | 0.641365 | 8_3:+9365179 | Msa1275430:CDS |
ATATTGGAGAATTGATAGCA+AGG | 0.642106 | 8_3:+9367218 | Msa1275430:CDS |
CAGGAACCCTAGGGTCACAA+AGG | 0.642284 | 8_3:+9365188 | Msa1275430:CDS |
GAAGGAATGAAGTTGTCTAG+AGG | 0.642343 | 8_3:+9367401 | Msa1275430:CDS |
ACAGGTTGGTGGTTCTAGTG+AGG | 0.642771 | 8_3:+9370710 | Msa1275430:intron |
AACCTATGTTGATATGGTGA+AGG | 0.647220 | 8_3:+9371766 | Msa1275430:CDS |
ATTCGATAAAGAAAAGGCAC+AGG | 0.647539 | 8_3:+9370557 | Msa1275430:CDS |
GATCTTGCAATTCTTACTGG+AGG | 0.647968 | 8_3:+9369948 | Msa1275430:CDS |
CTGTTACCTTAAGCCCAGCA+TGG | 0.648433 | 8_3:-9368256 | None:intergenic |
GTTGCTACTGACGACAACCG+AGG | 0.650081 | 8_3:+9371942 | Msa1275430:CDS |
TTTGGTGCAGGTGTATAATG+GGG | 0.650701 | 8_3:+9364275 | Msa1275430:intron |
CGGCTGTCAAAACTCTCTGG+CGG | 0.654648 | 8_3:+9370582 | Msa1275430:CDS |
GATGACACTATTGTTCTACA+TGG | 0.655586 | 8_3:+9370223 | Msa1275430:CDS |
ATACATTGTAGTTACAGCAA+CGG | 0.656201 | 8_3:-9364026 | None:intergenic |
TCAGGCCGGACTTTGTCGAG+AGG | 0.660346 | 8_3:-9370086 | None:intergenic |
CAGCTCCAATACTTTCAACA+GGG | 0.661874 | 8_3:-9368059 | None:intergenic |
TCTTCCGCAACAACTAGGAG+TGG | 0.668081 | 8_3:-9368191 | None:intergenic |
CAGGTCATCACAGAAGAGCG+TGG | 0.689107 | 8_3:+9370059 | Msa1275430:intron |
TACACCAGAAGAAATAACCC+AGG | 0.716918 | 8_3:+9366903 | Msa1275430:CDS |
GACACTATTGTTCTACATGG+TGG | 0.730308 | 8_3:+9370226 | Msa1275430:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAAAAAAAAA+GGG | - | chr8_3:9368442-9368461 | None:intergenic | 0.0% |
!! | AAAAAAAAAAAAAAAAAAAA+AGG | - | chr8_3:9368442-9368461 | None:intergenic | 0.0% |
!! | ATAAAAAAATATATATATAA+AGG | + | chr8_3:9368891-9368910 | Msa1275430:intron | 0.0% |
!! | TAAAAAAATATATATATAAA+GGG | + | chr8_3:9368892-9368911 | Msa1275430:intron | 0.0% |
!! | TATAATTGTAAATTTCAAAA+GGG | - | chr8_3:9363837-9363856 | None:intergenic | 10.0% |
!! | ATATAATTGTAAATTTCAAA+AGG | - | chr8_3:9363838-9363857 | None:intergenic | 10.0% |
!!! | TTTTGAAATTTACAATTATA+TGG | + | chr8_3:9363837-9363856 | Msa1275430:five_prime_UTR | 10.0% |
!!! | TTTGAAATTTACAATTATAT+GGG | + | chr8_3:9363838-9363857 | Msa1275430:five_prime_UTR | 10.0% |
!! | TTTAAGAATAAAAATAAGAT+TGG | - | chr8_3:9364124-9364143 | None:intergenic | 10.0% |
!!! | ACAAAAAAAAATGTATTTTT+TGG | + | chr8_3:9366523-9366542 | Msa1275430:intron | 10.0% |
!!! | TTGTTTACATTTTTTTTTTT+GGG | + | chr8_3:9367934-9367953 | Msa1275430:intron | 10.0% |
!! | CTTGAAAAAATAAAAAATTA+AGG | - | chr8_3:9368612-9368631 | None:intergenic | 10.0% |
!!! | AAATTTTATATTAGTGTTAA+AGG | + | chr8_3:9368753-9368772 | Msa1275430:intron | 10.0% |
!! | AAAACTGATTAATAAAATAT+AGG | - | chr8_3:9369989-9370008 | None:intergenic | 10.0% |
!!! | AACATTTTTCAAAAAATAAA+GGG | - | chr8_3:9370333-9370352 | None:intergenic | 10.0% |
!!! | AAACATTTTTCAAAAAATAA+AGG | - | chr8_3:9370334-9370353 | None:intergenic | 10.0% |
!!! | AATAAAAATAAGATTGGTTA+TGG | - | chr8_3:9364118-9364137 | None:intergenic | 15.0% |
!!! | AGTTTGAATTTTTATTGAAT+TGG | + | chr8_3:9364172-9364191 | Msa1275430:intron | 15.0% |
!!! | GAAATAAAAATGATGAATTT+TGG | + | chr8_3:9364257-9364276 | Msa1275430:intron | 15.0% |
!! | TAATAATATATTTCAATCTC+AGG | + | chr8_3:9365446-9365465 | Msa1275430:intron | 15.0% |
!! | AATAATATATTTCAATCTCA+GGG | + | chr8_3:9365447-9365466 | Msa1275430:intron | 15.0% |
!!! | AAAAAAAATGTATTTTTTGG+CGG | + | chr8_3:9366526-9366545 | Msa1275430:intron | 15.0% |
!!! | ATATGTCTAAAATTGATTAT+AGG | - | chr8_3:9367018-9367037 | None:intergenic | 15.0% |
!!! | ATAATCAATTTTAGACATAT+AGG | + | chr8_3:9367018-9367037 | Msa1275430:intron | 15.0% |
!!! | ATTGATTTTATATGACTAAT+AGG | + | chr8_3:9367165-9367184 | Msa1275430:intron | 15.0% |
!!! | TTTTTTAGAGGAATAAATAA+AGG | - | chr8_3:9367635-9367654 | None:intergenic | 15.0% |
!! | TGACATCATATATAAATAAA+AGG | + | chr8_3:9367900-9367919 | Msa1275430:intron | 15.0% |
!!! | CTTGTTTACATTTTTTTTTT+TGG | + | chr8_3:9367933-9367952 | Msa1275430:intron | 15.0% |
!!! | TAGAATAGTCATATTTTAAA+TGG | - | chr8_3:9368130-9368149 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAAAAGGGTTT+GGG | - | chr8_3:9368436-9368455 | None:intergenic | 15.0% |
!! | AAAAAAAAAAAAAAAGGGTT+TGG | - | chr8_3:9368437-9368456 | None:intergenic | 15.0% |
!! | ATTTAAACGAATGTTAAATT+CGG | - | chr8_3:9368949-9368968 | None:intergenic | 15.0% |
!! | AATGAAATCTTGAATATAAT+TGG | - | chr8_3:9369502-9369521 | None:intergenic | 15.0% |
!! | ATATGATATACATAATTAAG+TGG | + | chr8_3:9369612-9369631 | Msa1275430:intron | 15.0% |
!! | AAAAAATAAAGAAAAATACC+TGG | - | chr8_3:9370285-9370304 | None:intergenic | 15.0% |
!! | ATATAGAAATAAAAACCATT+TGG | - | chr8_3:9370368-9370387 | None:intergenic | 15.0% |
!! | TTGCAGAAAAAAAAAAAAAA+GGG | - | chr8_3:9371140-9371159 | None:intergenic | 15.0% |
!! | ATTGCAGAAAAAAAAAAAAA+AGG | - | chr8_3:9371141-9371160 | None:intergenic | 15.0% |
!! | TTATACTTGTATTAAAAAGA+AGG | + | chr8_3:9371708-9371727 | Msa1275430:intron | 15.0% |
!! | AAAATTCTTATTCTATTGTT+TGG | + | chr8_3:9372384-9372403 | Msa1275430:three_prime_UTR | 15.0% |
!! | AAATTCTTATTCTATTGTTT+GGG | + | chr8_3:9372385-9372404 | Msa1275430:three_prime_UTR | 15.0% |
!!! | TTTTTATTGAATTGGAATTG+TGG | + | chr8_3:9364180-9364199 | Msa1275430:intron | 20.0% |
!!! | TTTTATTGAATTGGAATTGT+GGG | + | chr8_3:9364181-9364200 | Msa1275430:intron | 20.0% |
!! | CTGATAATAATTTGAGAAAA+TGG | + | chr8_3:9364631-9364650 | Msa1275430:intron | 20.0% |
!!! | TTTGGATTAGAAATGTTAAT+TGG | + | chr8_3:9365069-9365088 | Msa1275430:intron | 20.0% |
!!! | TATTTTCTTTTGTTTCGAAT+TGG | + | chr8_3:9365127-9365146 | Msa1275430:intron | 20.0% |
!! | AATTCTCAATAAACACTTAT+AGG | - | chr8_3:9365363-9365382 | None:intergenic | 20.0% |
!! | TATAAGTGTTTATTGAGAAT+TGG | + | chr8_3:9365362-9365381 | Msa1275430:intron | 20.0% |
!!! | ATATAGTTAATGAGTTTTGA+TGG | - | chr8_3:9365490-9365509 | None:intergenic | 20.0% |
!! | AAATAAAAACTAGATACTTG+CGG | - | chr8_3:9365877-9365896 | None:intergenic | 20.0% |
!!! | TCATTTTTTAAGAACATTAG+AGG | + | chr8_3:9365905-9365924 | Msa1275430:intron | 20.0% |
!!! | AATTCTTAGATGGATTAAAA+TGG | - | chr8_3:9365935-9365954 | None:intergenic | 20.0% |
!! | TATGGTATTTAATTCTTAGA+TGG | - | chr8_3:9365945-9365964 | None:intergenic | 20.0% |
!!! | AAAAAAATGTATTTTTTGGC+GGG | + | chr8_3:9366527-9366546 | Msa1275430:intron | 20.0% |
!!! | CACTGTTAATAAATGAATTT+TGG | + | chr8_3:9366950-9366969 | Msa1275430:intron | 20.0% |
!!! | ATTTTATATGACTAATAGGT+TGG | + | chr8_3:9367169-9367188 | Msa1275430:intron | 20.0% |
!!! | TCTAAGATTTTAATGTTTTC+AGG | + | chr8_3:9367343-9367362 | Msa1275430:intron | 20.0% |
!! | TTCTGATCAGTAATAAAATA+AGG | - | chr8_3:9367437-9367456 | None:intergenic | 20.0% |
!!! | TAAAGGAAACTTTTTTTTAG+AGG | - | chr8_3:9367647-9367666 | None:intergenic | 20.0% |
!! | TTATAAGAAGAAAAACAACA+GGG | - | chr8_3:9367709-9367728 | None:intergenic | 20.0% |
!! | ATTATAAGAAGAAAAACAAC+AGG | - | chr8_3:9367710-9367729 | None:intergenic | 20.0% |
!! | CATATGACTAATTTATTCTA+CGG | - | chr8_3:9367850-9367869 | None:intergenic | 20.0% |
!! | GGATATATATAACTTAAGAT+AGG | - | chr8_3:9368477-9368496 | None:intergenic | 20.0% |
!! | ATAAACAACTTTACTACATA+AGG | + | chr8_3:9369029-9369048 | Msa1275430:intron | 20.0% |
!! | TCTTGAATATAATTGGAATA+TGG | - | chr8_3:9369495-9369514 | None:intergenic | 20.0% |
!! | TGCTGATATAGTATATAATT+AGG | + | chr8_3:9369523-9369542 | Msa1275430:intron | 20.0% |
!!! | TTTCAAGATTCTTGTATTTT+AGG | + | chr8_3:9369872-9369891 | Msa1275430:intron | 20.0% |
!!! | GATTTTTTGTAACACATTAA+AGG | - | chr8_3:9370170-9370189 | None:intergenic | 20.0% |
!!! | GATTTTGATGAAAATATTAC+TGG | + | chr8_3:9370405-9370424 | Msa1275430:intron | 20.0% |
!!! | AAATATCATTTTGTAGTTGA+GGG | + | chr8_3:9370509-9370528 | Msa1275430:intron | 20.0% |
!!! | ATCATAAAGTAGTTGTTTTA+AGG | - | chr8_3:9370637-9370656 | None:intergenic | 20.0% |
!!! | TTTTTATTCATTACCTTACA+TGG | + | chr8_3:9370668-9370687 | Msa1275430:intron | 20.0% |
!!! | GGTATGTAATTGTTTTATTA+AGG | + | chr8_3:9371259-9371278 | Msa1275430:intron | 20.0% |
!!! | ATGTAATTGTTTTATTAAGG+TGG | + | chr8_3:9371262-9371281 | Msa1275430:intron | 20.0% |
!!! | AGAAATAAAGAAAATTTTCC+AGG | - | chr8_3:9371452-9371471 | None:intergenic | 20.0% |
!! | TAATGTATATTACTTGTCAT+AGG | + | chr8_3:9371474-9371493 | Msa1275430:intron | 20.0% |
!!! | GAACAAGATGATTTTAATTT+GGG | + | chr8_3:9371562-9371581 | Msa1275430:CDS | 20.0% |
!! | ATATTTATTCTCAAATGTCA+AGG | - | chr8_3:9371680-9371699 | None:intergenic | 20.0% |
!!! | TTCAAGTTATCATAATCAAT+AGG | + | chr8_3:9372195-9372214 | Msa1275430:three_prime_UTR | 20.0% |
!! | TGAAATGAGATAAAATAGAA+TGG | - | chr8_3:9372507-9372526 | None:intergenic | 20.0% |
!! | TTCTAGAGAACAAAAATCAA+AGG | + | chr8_3:9363881-9363900 | Msa1275430:five_prime_UTR | 25.0% |
! | TCTAGAGAACAAAAATCAAA+GGG | + | chr8_3:9363882-9363901 | Msa1275430:five_prime_UTR | 25.0% |
! | AATTGAAGAAGAAGCAAATA+GGG | - | chr8_3:9363964-9363983 | None:intergenic | 25.0% |
! | TTTATTGAATTGGAATTGTG+GGG | + | chr8_3:9364182-9364201 | Msa1275430:intron | 25.0% |
!!! | AATTTCGTTTTTGCTTTGAT+GGG | + | chr8_3:9364223-9364242 | Msa1275430:intron | 25.0% |
! | CTGATAATAATTGGAGAAAA+TGG | + | chr8_3:9364526-9364545 | Msa1275430:intron | 25.0% |
!! | GTCTTTGAATTTGATACTTT+TGG | - | chr8_3:9365229-9365248 | None:intergenic | 25.0% |
! | AAACTCATTAACTATATCCA+AGG | + | chr8_3:9365493-9365512 | Msa1275430:intron | 25.0% |
! | TAAAAATCCCGGTTTAAATA+TGG | + | chr8_3:9365788-9365807 | Msa1275430:intron | 25.0% |
! | AAAAATCCCGGTTTAAATAT+GGG | + | chr8_3:9365789-9365808 | Msa1275430:intron | 25.0% |
! | AATAAAAACTAGATACTTGC+GGG | - | chr8_3:9365876-9365895 | None:intergenic | 25.0% |
!! | TTCTGTTAGATTTGTCTTTT+TGG | - | chr8_3:9366000-9366019 | None:intergenic | 25.0% |
! | AACAGAATACTTACAACTTT+AGG | - | chr8_3:9366194-9366213 | None:intergenic | 25.0% |
!!! | GTCTTTTTTTATCTCTGTTT+AGG | - | chr8_3:9366398-9366417 | None:intergenic | 25.0% |
!!! | CATTTTTTTTTGTCTTTGTG+TGG | - | chr8_3:9366516-9366535 | None:intergenic | 25.0% |
! | TAAAAAGCCCTGAAAAAATT+CGG | + | chr8_3:9366615-9366634 | Msa1275430:intron | 25.0% |
!! | ATTTAAAACAGTACAACGAA+TGG | - | chr8_3:9367126-9367145 | None:intergenic | 25.0% |
! | TATTGACAAAGTTTCAATAC+AGG | + | chr8_3:9367317-9367336 | Msa1275430:intron | 25.0% |
!!! | AGATTTTAATGTTTTCAGGA+TGG | + | chr8_3:9367347-9367366 | Msa1275430:intron | 25.0% |
!!! | GATTTTAATGTTTTCAGGAT+GGG | + | chr8_3:9367348-9367367 | Msa1275430:intron | 25.0% |
!! | TCCTTTATTTATTGTGAAGT+TGG | + | chr8_3:9367660-9367679 | Msa1275430:intron | 25.0% |
! | ATTAGTCATATGTATTAGCT+TGG | + | chr8_3:9367858-9367877 | Msa1275430:intron | 25.0% |
!!! | GATGTTAATAAAGTTGATGT+CGG | + | chr8_3:9367972-9367991 | Msa1275430:intron | 25.0% |
! | CATCAAAACCATTACTATTA+CGG | - | chr8_3:9368506-9368525 | None:intergenic | 25.0% |
! | TGCATGATATAAGATTAAGT+TGG | + | chr8_3:9368690-9368709 | Msa1275430:intron | 25.0% |
! | GCATGATATAAGATTAAGTT+GGG | + | chr8_3:9368691-9368710 | Msa1275430:intron | 25.0% |
! | ATAAAATTTGTCCAGTATCT+CGG | - | chr8_3:9368742-9368761 | None:intergenic | 25.0% |
!! | TCTGGGATTAAATTATTAGT+GGG | - | chr8_3:9369156-9369175 | None:intergenic | 25.0% |
!! | ATCTGGGATTAAATTATTAG+TGG | - | chr8_3:9369157-9369176 | None:intergenic | 25.0% |
! | AAATAACTAGATTACAAGCA+GGG | - | chr8_3:9369184-9369203 | None:intergenic | 25.0% |
! | GTAATCTAGTTATTTGTACT+TGG | + | chr8_3:9369189-9369208 | Msa1275430:intron | 25.0% |
! | ATTATGGAGTTATTTGTAGA+TGG | - | chr8_3:9369389-9369408 | None:intergenic | 25.0% |
! | ATCTACAAATAACTCCATAA+TGG | + | chr8_3:9369388-9369407 | Msa1275430:intron | 25.0% |
! | TCTACAAATAACTCCATAAT+GGG | + | chr8_3:9369389-9369408 | Msa1275430:intron | 25.0% |
!!! | TGTTATTTCCAAAGGTTTTA+TGG | - | chr8_3:9369564-9369583 | None:intergenic | 25.0% |
!!! | ATTTCACTTGTTATTTCCAA+AGG | - | chr8_3:9369572-9369591 | None:intergenic | 25.0% |
! | TGAAAGTAATGCAAAATACT+TGG | + | chr8_3:9369794-9369813 | Msa1275430:intron | 25.0% |
! | CAAGAATCTTGAAATAAAGT+AGG | - | chr8_3:9369866-9369885 | None:intergenic | 25.0% |
!! | TATTAATCAGTTTTCGTGTT+TGG | + | chr8_3:9369995-9370014 | Msa1275430:intron | 25.0% |
! | ACTACTTATTATGCTGAAAA+TGG | + | chr8_3:9370018-9370037 | Msa1275430:intron | 25.0% |
! | ATAAAAACCATTTGGCTAAA+TGG | - | chr8_3:9370360-9370379 | None:intergenic | 25.0% |
!! | CAAATATCATTTTGTAGTTG+AGG | + | chr8_3:9370508-9370527 | Msa1275430:intron | 25.0% |
!!! | TCAATTTTGTCATTTCTGAT+GGG | + | chr8_3:9370819-9370838 | Msa1275430:intron | 25.0% |
! | AAAACTTCTATTGTTCTATG+TGG | + | chr8_3:9370908-9370927 | Msa1275430:intron | 25.0% |
! | CTTGTTCATCTATTAAAAGT+CGG | + | chr8_3:9371238-9371257 | Msa1275430:intron | 25.0% |
!!! | TAATTGTTTTATTAAGGTGG+TGG | + | chr8_3:9371265-9371284 | Msa1275430:intron | 25.0% |
!! | TTTGAAGCTATTGTATATGT+TGG | - | chr8_3:9371502-9371521 | None:intergenic | 25.0% |
!!! | GGAACAAGATGATTTTAATT+TGG | + | chr8_3:9371561-9371580 | Msa1275430:CDS | 25.0% |
! | CTAATCTCAATTACATAAAC+TGG | - | chr8_3:9371613-9371632 | None:intergenic | 25.0% |
!!! | GATGCTTATTTTGCTAAAAT+AGG | + | chr8_3:9371743-9371762 | Msa1275430:intron | 25.0% |
! | TTACAGAAATTATGGTACAA+AGG | - | chr8_3:9372261-9372280 | None:intergenic | 25.0% |
! | TTCTTGTGTTACAGAAATTA+TGG | - | chr8_3:9372269-9372288 | None:intergenic | 25.0% |
! | CGCTAATGTTTAAAAATGAA+TGG | + | chr8_3:9372325-9372344 | Msa1275430:three_prime_UTR | 25.0% |
! | ATGTTTAAAAATGAATGGAG+CGG | + | chr8_3:9372330-9372349 | Msa1275430:three_prime_UTR | 25.0% |
!! | ATTGTTTGGGTATTTTGTAA+TGG | + | chr8_3:9372398-9372417 | Msa1275430:three_prime_UTR | 25.0% |
! | TGAGATAAAATAGAATGGAT+TGG | - | chr8_3:9372502-9372521 | None:intergenic | 25.0% |
! | TCTAGAAACTTCCTTTTTGA+TGG | - | chr8_3:9363868-9363887 | None:intergenic | 30.0% |
TTTAGAGAGAGTTAGAGAAA+GGG | - | chr8_3:9363940-9363959 | None:intergenic | 30.0% | |
!! | TTTTAGAGAGAGTTAGAGAA+AGG | - | chr8_3:9363941-9363960 | None:intergenic | 30.0% |
GAATTGAAGAAGAAGCAAAT+AGG | - | chr8_3:9363965-9363984 | None:intergenic | 30.0% | |
ATACATTGTAGTTACAGCAA+CGG | - | chr8_3:9364029-9364048 | None:intergenic | 30.0% | |
!! | CAATTTCGTTTTTGCTTTGA+TGG | + | chr8_3:9364222-9364241 | Msa1275430:intron | 30.0% |
!! | AAAATGATGAATTTTGGTGC+AGG | + | chr8_3:9364263-9364282 | Msa1275430:intron | 30.0% |
GTGACTAAAGATATCAACTT+TGG | + | chr8_3:9364318-9364337 | Msa1275430:CDS | 30.0% | |
!! | AAAGATATCAACTTTGGAGT+TGG | + | chr8_3:9364324-9364343 | Msa1275430:CDS | 30.0% |
!! | AAGATATCAACTTTGGAGTT+GGG | + | chr8_3:9364325-9364344 | Msa1275430:CDS | 30.0% |
AGAAAACAAGACAATACCTT+GGG | - | chr8_3:9364414-9364433 | None:intergenic | 30.0% | |
AAGTAGTAATGGTACAAATG+AGG | - | chr8_3:9364571-9364590 | None:intergenic | 30.0% | |
GGTCATAACATAAGTAGTAA+TGG | - | chr8_3:9364582-9364601 | None:intergenic | 30.0% | |
TTGAATGTAAGTACATGTGT+CGG | + | chr8_3:9364660-9364679 | Msa1275430:intron | 30.0% | |
! | CAATCTAAAATATGCTACGT+AGG | + | chr8_3:9364711-9364730 | Msa1275430:intron | 30.0% |
TGTAGCACATTTCAAAATGA+AGG | - | chr8_3:9364802-9364821 | None:intergenic | 30.0% | |
!!! | CATTTTGAAATGTGCTACAT+AGG | + | chr8_3:9364803-9364822 | Msa1275430:intron | 30.0% |
TTGAATGTAAGTACTTGTGT+CGG | + | chr8_3:9364839-9364858 | Msa1275430:intron | 30.0% | |
TGAAGCACATTTCAAATTGA+AGG | - | chr8_3:9364891-9364910 | None:intergenic | 30.0% | |
GTTAATTGGAGAAATTGACA+TGG | + | chr8_3:9365083-9365102 | Msa1275430:intron | 30.0% | |
AAAGACAAAGCCAAAAATCT+TGG | + | chr8_3:9365243-9365262 | Msa1275430:CDS | 30.0% | |
! | AACACTTATAGGATGTTTTG+AGG | - | chr8_3:9365352-9365371 | None:intergenic | 30.0% |
TTCGTGGTGATCAAAAAATA+TGG | - | chr8_3:9365963-9365982 | None:intergenic | 30.0% | |
CATATTCCTATTGTAGTATC+AGG | - | chr8_3:9366222-9366241 | None:intergenic | 30.0% | |
ATGCATTATCAACAACTAAG+TGG | + | chr8_3:9366281-9366300 | Msa1275430:intron | 30.0% | |
TGCATTATCAACAACTAAGT+GGG | + | chr8_3:9366282-9366301 | Msa1275430:intron | 30.0% | |
TAAGTTTGAGTATCAATCTG+TGG | - | chr8_3:9366420-9366439 | None:intergenic | 30.0% | |
AAAAAGCCCTGAAAAAATTC+GGG | + | chr8_3:9366616-9366635 | Msa1275430:intron | 30.0% | |
!!! | CTTTTTTTCCGACAAAAATC+TGG | + | chr8_3:9367061-9367080 | Msa1275430:intron | 30.0% |
TGGCACTTCATATATCTATT+AGG | - | chr8_3:9367106-9367125 | None:intergenic | 30.0% | |
TAAAATCAATGAATAGCCAG+CGG | - | chr8_3:9367155-9367174 | None:intergenic | 30.0% | |
TTGGTACTATATCTGCAAAT+GGG | + | chr8_3:9367188-9367207 | Msa1275430:CDS | 30.0% | |
! | ATATTGGAGAATTGATAGCA+AGG | + | chr8_3:9367218-9367237 | Msa1275430:CDS | 30.0% |
! | TATTGGAGAATTGATAGCAA+GGG | + | chr8_3:9367219-9367238 | Msa1275430:CDS | 30.0% |
! | TCTTTTGTCACTAACATAGA+TGG | + | chr8_3:9367486-9367505 | Msa1275430:intron | 30.0% |
CTGTGATAAACATATGATGA+TGG | + | chr8_3:9367557-9367576 | Msa1275430:intron | 30.0% | |
!! | ACATATGATGATGGTATACT+TGG | + | chr8_3:9367566-9367585 | Msa1275430:intron | 30.0% |
!! | CATATGATGATGGTATACTT+GGG | + | chr8_3:9367567-9367586 | Msa1275430:intron | 30.0% |
!! | ATATGATGATGGTATACTTG+GGG | + | chr8_3:9367568-9367587 | Msa1275430:intron | 30.0% |
GCCAACTTCACAATAAATAA+AGG | - | chr8_3:9367664-9367683 | None:intergenic | 30.0% | |
ATTTATTGTGAAGTTGGCAA+AGG | + | chr8_3:9367666-9367685 | Msa1275430:intron | 30.0% | |
!!! | CAACAGGGTCTTTTTTATAA+AGG | - | chr8_3:9367694-9367713 | None:intergenic | 30.0% |
! | AAATTTTCTTGTCATGGATG+AGG | - | chr8_3:9368027-9368046 | None:intergenic | 30.0% |
!! | TGTCTGAAATTTTCTTGTCA+TGG | - | chr8_3:9368033-9368052 | None:intergenic | 30.0% |
TGACAAGAAAATTTCAGACA+TGG | + | chr8_3:9368033-9368052 | Msa1275430:CDS | 30.0% | |
GACAAGAAAATTTCAGACAT+GGG | + | chr8_3:9368034-9368053 | Msa1275430:CDS | 30.0% | |
TTTGTAAGACCTTTAGATAG+CGG | - | chr8_3:9368302-9368321 | None:intergenic | 30.0% | |
!!! | TAGTAATGGTTTTGATGCTT+TGG | + | chr8_3:9368509-9368528 | Msa1275430:intron | 30.0% |
CTGGGATTAAATTATTAGTG+GGG | - | chr8_3:9369155-9369174 | None:intergenic | 30.0% | |
AATAACTAGATTACAAGCAG+GGG | - | chr8_3:9369183-9369202 | None:intergenic | 30.0% | |
CAAATAACTAGATTACAAGC+AGG | - | chr8_3:9369185-9369204 | None:intergenic | 30.0% | |
ATCTAGTTATTTGTACTTGG+TGG | + | chr8_3:9369192-9369211 | Msa1275430:intron | 30.0% | |
CTACAAATAACTCCATAATG+GGG | + | chr8_3:9369390-9369409 | Msa1275430:intron | 30.0% | |
TACAAATAACTCCATAATGG+GGG | + | chr8_3:9369391-9369410 | Msa1275430:intron | 30.0% | |
GTCATAGATGAATATTCAGA+TGG | + | chr8_3:9369712-9369731 | Msa1275430:intron | 30.0% | |
GAACCAACATAACTATTCTT+TGG | + | chr8_3:9370142-9370161 | Msa1275430:intron | 30.0% | |
GAACCAAAGAATAGTTATGT+TGG | - | chr8_3:9370148-9370167 | None:intergenic | 30.0% | |
TAGAACAATAGTGTCATCAA+TGG | - | chr8_3:9370221-9370240 | None:intergenic | 30.0% | |
! | GTTTTTACCATTTAGCCAAA+TGG | + | chr8_3:9370350-9370369 | Msa1275430:intron | 30.0% |
! | TAAATTAGACCTTTGATAGC+AGG | + | chr8_3:9370432-9370451 | Msa1275430:intron | 30.0% |
TCATTACCTTACATGGAATA+TGG | + | chr8_3:9370675-9370694 | Msa1275430:intron | 30.0% | |
TTAGATCCATATTCCATGTA+AGG | - | chr8_3:9370684-9370703 | None:intergenic | 30.0% | |
ATATGGATCTAAACATCTAC+AGG | + | chr8_3:9370692-9370711 | Msa1275430:intron | 30.0% | |
AATGACAAAATTGAGTTACC+TGG | - | chr8_3:9370813-9370832 | None:intergenic | 30.0% | |
!! | CTCAATTTTGTCATTTCTGA+TGG | + | chr8_3:9370818-9370837 | Msa1275430:intron | 30.0% |
GGTAAAATCAGAATAGTGAA+GGG | - | chr8_3:9371431-9371450 | None:intergenic | 30.0% | |
AGGTAAAATCAGAATAGTGA+AGG | - | chr8_3:9371432-9371451 | None:intergenic | 30.0% | |
! | TTCACTATTCTGATTTTACC+TGG | + | chr8_3:9371431-9371450 | Msa1275430:intron | 30.0% |
TATACAATAGCTTCAAATGC+TGG | + | chr8_3:9371505-9371524 | Msa1275430:CDS | 30.0% | |
AATAGGAACCTATGTTGATA+TGG | + | chr8_3:9371760-9371779 | Msa1275430:intron | 30.0% | |
TAAAGTTGTTAGAACAGCTT+TGG | + | chr8_3:9371808-9371827 | Msa1275430:CDS | 30.0% | |
TGTCATTATATGATCTTACC+TGG | - | chr8_3:9371843-9371862 | None:intergenic | 30.0% | |
! | CATCAGTTTTCTATTTATCG+AGG | + | chr8_3:9372075-9372094 | Msa1275430:three_prime_UTR | 30.0% |
AAGCTGCTAAAGTTTAAACT+TGG | + | chr8_3:9372098-9372117 | Msa1275430:three_prime_UTR | 30.0% | |
AGCTGCTAAAGTTTAAACTT+GGG | + | chr8_3:9372099-9372118 | Msa1275430:three_prime_UTR | 30.0% | |
TAAAACTTGTCCCATTCTTT+AGG | + | chr8_3:9372225-9372244 | Msa1275430:three_prime_UTR | 30.0% | |
ATGAATGACACCTAAAGAAT+GGG | - | chr8_3:9372238-9372257 | None:intergenic | 30.0% | |
! | GAAAGCAAATTCTTGTTTCA+TGG | + | chr8_3:9372423-9372442 | Msa1275430:three_prime_UTR | 30.0% |
! | CAAATTCTTGTTTCATGGTT+TGG | + | chr8_3:9372428-9372447 | Msa1275430:three_prime_UTR | 30.0% |
!! | GAAACTTCCTTTTTGATGGT+TGG | - | chr8_3:9363864-9363883 | None:intergenic | 35.0% |
GAGAACAAAAATCAAAGGGT+AGG | + | chr8_3:9363886-9363905 | Msa1275430:five_prime_UTR | 35.0% | |
ACGGTAAATTGTGAAGGTTA+GGG | - | chr8_3:9364010-9364029 | None:intergenic | 35.0% | |
AACGGTAAATTGTGAAGGTT+AGG | - | chr8_3:9364011-9364030 | None:intergenic | 35.0% | |
!! | GAGGTTTTTGTTCTTTGAAG+TGG | - | chr8_3:9364089-9364108 | None:intergenic | 35.0% |
!! | ATTTTGGTGCAGGTGTATAA+TGG | + | chr8_3:9364273-9364292 | Msa1275430:intron | 35.0% |
!! | TTTTGGTGCAGGTGTATAAT+GGG | + | chr8_3:9364274-9364293 | Msa1275430:intron | 35.0% |
!! | ATAATGGGGCATTGTTAAGA+AGG | + | chr8_3:9364289-9364308 | Msa1275430:CDS | 35.0% |
!! | AGATATCAACTTTGGAGTTG+GGG | + | chr8_3:9364326-9364345 | Msa1275430:CDS | 35.0% |
CAGAAAACAAGACAATACCT+TGG | - | chr8_3:9364415-9364434 | None:intergenic | 35.0% | |
TGTCAATGACAGAGCTTAAT+AGG | - | chr8_3:9364499-9364518 | None:intergenic | 35.0% | |
!! | CATGTGGCACTGATAATAAT+TGG | + | chr8_3:9364517-9364536 | Msa1275430:intron | 35.0% |
TAGTAATGGTACAAATGAGG+CGG | - | chr8_3:9364568-9364587 | None:intergenic | 35.0% | |
GGGTACTTACATTCAAAACA+CGG | - | chr8_3:9364746-9364765 | None:intergenic | 35.0% | |
GAAATGTGCTACATAGGTTA+AGG | + | chr8_3:9364809-9364828 | Msa1275430:intron | 35.0% | |
! | TTGCAAGTTGAAATGCGATT+TGG | + | chr8_3:9365051-9365070 | Msa1275430:intron | 35.0% |
AAATTGACATGGTGAAGTGA+TGG | + | chr8_3:9365094-9365113 | Msa1275430:intron | 35.0% | |
TGATAATTGAGAAAAGCCAC+AGG | + | chr8_3:9365169-9365188 | Msa1275430:CDS | 35.0% | |
ACTTCGAAAAAGCTTCTTGT+AGG | - | chr8_3:9365420-9365439 | None:intergenic | 35.0% | |
ATTCCAGCCCATATTTAAAC+CGG | - | chr8_3:9365799-9365818 | None:intergenic | 35.0% | |
AAACTCTTCATCTTCAGTTG+TGG | + | chr8_3:9366067-9366086 | Msa1275430:intron | 35.0% | |
AACTCTTCATCTTCAGTTGT+GGG | + | chr8_3:9366068-9366087 | Msa1275430:intron | 35.0% | |
TCCTAACCTGATACTACAAT+AGG | + | chr8_3:9366213-9366232 | Msa1275430:intron | 35.0% | |
TCCTATTGTAGTATCAGGTT+AGG | - | chr8_3:9366217-9366236 | None:intergenic | 35.0% | |
GCATTATCAACAACTAAGTG+GGG | + | chr8_3:9366283-9366302 | Msa1275430:intron | 35.0% | |
!!! | TTTTTTGTCTTTGTGTGGCT+TGG | - | chr8_3:9366511-9366530 | None:intergenic | 35.0% |
AAATTCGGGCTGCAATTATT+CGG | + | chr8_3:9366630-9366649 | Msa1275430:intron | 35.0% | |
GAAAGCCCGAATAAAATGTA+GGG | - | chr8_3:9366662-9366681 | None:intergenic | 35.0% | |
! | CTACATTTTATTCGGGCTTT+CGG | + | chr8_3:9366661-9366680 | Msa1275430:intron | 35.0% |
! | TACATTTTATTCGGGCTTTC+GGG | + | chr8_3:9366662-9366681 | Msa1275430:intron | 35.0% |
GCTTGTAAAGCTGTCAAAAT+GGG | - | chr8_3:9366706-9366725 | None:intergenic | 35.0% | |
TGGAAACAGAGAAGAAATGT+TGG | - | chr8_3:9366728-9366747 | None:intergenic | 35.0% | |
AACATTTCTTCTCTGTTTCC+AGG | + | chr8_3:9366727-9366746 | Msa1275430:intron | 35.0% | |
GTGTTAATGTCATGGATTTG+CGG | + | chr8_3:9366815-9366834 | Msa1275430:CDS | 35.0% | |
!! | TGTTTTAAATTGTTTGCCGC+TGG | + | chr8_3:9367136-9367155 | Msa1275430:intron | 35.0% |
GTTGGTACTATATCTGCAAA+TGG | + | chr8_3:9367187-9367206 | Msa1275430:CDS | 35.0% | |
TGGTACTATATCTGCAAATG+GGG | + | chr8_3:9367189-9367208 | Msa1275430:CDS | 35.0% | |
GAACACTATGGATAATGAGT+TGG | + | chr8_3:9367370-9367389 | Msa1275430:CDS | 35.0% | |
! | AATGAGTTGGAAGTAGTAGA+AGG | + | chr8_3:9367383-9367402 | Msa1275430:CDS | 35.0% |
!! | TATGATGATGGTATACTTGG+GGG | + | chr8_3:9367569-9367588 | Msa1275430:intron | 35.0% |
! | AATCGTGTGATCATTTGTTG+AGG | + | chr8_3:9367727-9367746 | Msa1275430:intron | 35.0% |
! | ATTTGTTGAGGACAGTGTTA+TGG | + | chr8_3:9367739-9367758 | Msa1275430:intron | 35.0% |
GTTATGGTGCATTACTTTGA+AGG | + | chr8_3:9367755-9367774 | Msa1275430:intron | 35.0% | |
!!! | AAGTTGATGTCGGTTTTGTT+AGG | + | chr8_3:9367982-9368001 | Msa1275430:intron | 35.0% |
!!! | ATGTCGGTTTTGTTAGGAAT+TGG | + | chr8_3:9367988-9368007 | Msa1275430:intron | 35.0% |
TTGTCATGGATGAGGATAAA+GGG | - | chr8_3:9368019-9368038 | None:intergenic | 35.0% | |
TTAAGGTAACAGGTTCATCT+TGG | + | chr8_3:9368267-9368286 | Msa1275430:intron | 35.0% | |
TTATATGTCCCGCTATCTAA+AGG | + | chr8_3:9368290-9368309 | Msa1275430:intron | 35.0% | |
TTGTAAGACCTTTAGATAGC+GGG | - | chr8_3:9368301-9368320 | None:intergenic | 35.0% | |
! | TGTACCAGTAACTTGTAATC+AGG | + | chr8_3:9368363-9368382 | Msa1275430:intron | 35.0% |
! | GTACCAGTAACTTGTAATCA+GGG | + | chr8_3:9368364-9368383 | Msa1275430:intron | 35.0% |
! | TACCAGTAACTTGTAATCAG+GGG | + | chr8_3:9368365-9368384 | Msa1275430:intron | 35.0% |
AAAAAAAAAGGGTTTGGGCT+GGG | - | chr8_3:9368431-9368450 | None:intergenic | 35.0% | |
AAAAAAAAAAGGGTTTGGGC+TGG | - | chr8_3:9368432-9368451 | None:intergenic | 35.0% | |
CCATTACTATTACGGAATAG+AGG | - | chr8_3:9368498-9368517 | None:intergenic | 35.0% | |
CCTCTATTCCGTAATAGTAA+TGG | + | chr8_3:9368495-9368514 | Msa1275430:intron | 35.0% | |
AGAAAGTGAGAGTTGAACTT+GGG | - | chr8_3:9368579-9368598 | None:intergenic | 35.0% | |
AAAATGAACAACCGAGATAC+TGG | + | chr8_3:9368728-9368747 | Msa1275430:intron | 35.0% | |
! | ATAAAGGGGAGACTCATTTT+TGG | + | chr8_3:9368907-9368926 | Msa1275430:intron | 35.0% |
GAATATGGAACACTTTACAC+AGG | - | chr8_3:9369480-9369499 | None:intergenic | 35.0% | |
TTGTCTTGCCATAAAACCTT+TGG | + | chr8_3:9369553-9369572 | Msa1275430:intron | 35.0% | |
ACTAAACTTATCATCCGAAG+AGG | + | chr8_3:9369679-9369698 | Msa1275430:intron | 35.0% | |
TGACAACTGAAAATCCTCTT+CGG | - | chr8_3:9369696-9369715 | None:intergenic | 35.0% | |
!! | CTATAAAAGCTCCTGGTTTT+GGG | + | chr8_3:9369901-9369920 | Msa1275430:CDS | 35.0% |
!!! | TATAAAAGCTCCTGGTTTTG+GGG | + | chr8_3:9369902-9369921 | Msa1275430:CDS | 35.0% |
GATGATCTTGCAATTCTTAC+TGG | + | chr8_3:9369945-9369964 | Msa1275430:CDS | 35.0% | |
GTCACAATGAATATGTGAAC+AGG | + | chr8_3:9370040-9370059 | Msa1275430:intron | 35.0% | |
AATAGTGTCATCAATGGAGA+CGG | - | chr8_3:9370215-9370234 | None:intergenic | 35.0% | |
GATGACACTATTGTTCTACA+TGG | + | chr8_3:9370223-9370242 | Msa1275430:CDS | 35.0% | |
!! | TAGCAGGCTGTTGATAATAA+TGG | + | chr8_3:9370448-9370467 | Msa1275430:intron | 35.0% |
TGCGACATTCGATAAAGAAA+AGG | + | chr8_3:9370551-9370570 | Msa1275430:CDS | 35.0% | |
! | ATTCGATAAAGAAAAGGCAC+AGG | + | chr8_3:9370557-9370576 | Msa1275430:CDS | 35.0% |
! | ATAAAGAAAAGGCACAGGAA+CGG | + | chr8_3:9370562-9370581 | Msa1275430:CDS | 35.0% |
!! | TTTCTGAAGTTGTTGTCATG+TGG | + | chr8_3:9370981-9371000 | Msa1275430:intron | 35.0% |
AGCCTCTTGTGTAAAAAACA+GGG | + | chr8_3:9371035-9371054 | Msa1275430:intron | 35.0% | |
!!! | TACCCTGTTTTTTACACAAG+AGG | - | chr8_3:9371040-9371059 | None:intergenic | 35.0% |
CTTGTGTAAAAAACAGGGTA+AGG | + | chr8_3:9371040-9371059 | Msa1275430:intron | 35.0% | |
CTTATATGCTAGCAAAGTCT+TGG | + | chr8_3:9371297-9371316 | Msa1275430:CDS | 35.0% | |
GAACCTTCAAACTAAAAACG+AGG | + | chr8_3:9371321-9371340 | Msa1275430:CDS | 35.0% | |
!!! | CATCCTCGTTTTTAGTTTGA+AGG | - | chr8_3:9371327-9371346 | None:intergenic | 35.0% |
GATTATTCAGAATGCACTCA+AGG | + | chr8_3:9371363-9371382 | Msa1275430:CDS | 35.0% | |
!! | CAACAATTTGCTGTGAACTA+GGG | - | chr8_3:9371542-9371561 | None:intergenic | 35.0% |
ACAGCAAAGGATAATCACAA+TGG | - | chr8_3:9371644-9371663 | None:intergenic | 35.0% | |
TTCGATAAACAAGACAGCAA+AGG | - | chr8_3:9371657-9371676 | None:intergenic | 35.0% | |
AACCTATGTTGATATGGTGA+AGG | + | chr8_3:9371766-9371785 | Msa1275430:CDS | 35.0% | |
GCTGTTCTAACAACTTTAAC+AGG | - | chr8_3:9371806-9371825 | None:intergenic | 35.0% | |
TAGTCCAAATCATCCATATC+TGG | - | chr8_3:9372018-9372037 | None:intergenic | 35.0% | |
GCTGCTAAAGTTTAAACTTG+GGG | + | chr8_3:9372100-9372119 | Msa1275430:three_prime_UTR | 35.0% | |
CTGCTAAAGTTTAAACTTGG+GGG | + | chr8_3:9372101-9372120 | Msa1275430:three_prime_UTR | 35.0% | |
TGCTAAAGTTTAAACTTGGG+GGG | + | chr8_3:9372102-9372121 | Msa1275430:three_prime_UTR | 35.0% | |
GATGAATGACACCTAAAGAA+TGG | - | chr8_3:9372239-9372258 | None:intergenic | 35.0% | |
TAAAAATGAATGGAGCGGAA+TGG | + | chr8_3:9372335-9372354 | Msa1275430:three_prime_UTR | 35.0% | |
ATATGGGCCAACCATCAAAA+AGG | + | chr8_3:9363854-9363873 | Msa1275430:five_prime_UTR | 40.0% | |
ACAGCAACGGTAAATTGTGA+AGG | - | chr8_3:9364016-9364035 | None:intergenic | 40.0% | |
! | AGATTGGTTATGGTCTTACG+AGG | - | chr8_3:9364108-9364127 | None:intergenic | 40.0% |
! | TTTGGTGCAGGTGTATAATG+GGG | + | chr8_3:9364275-9364294 | Msa1275430:intron | 40.0% |
! | TATGCTTCAAGGTGTTTCTG+AGG | + | chr8_3:9364359-9364378 | Msa1275430:CDS | 40.0% |
TAAGCTCTGTCATTGACATG+TGG | + | chr8_3:9364501-9364520 | Msa1275430:intron | 40.0% | |
! | TTTCAAAATGAAGGCGTGTC+AGG | - | chr8_3:9364793-9364812 | None:intergenic | 40.0% |
CACCGTATAGGTTTGTCAAT+GGG | + | chr8_3:9364989-9365008 | Msa1275430:intron | 40.0% | |
CACCCATTGACAAACCTATA+CGG | - | chr8_3:9364994-9365013 | None:intergenic | 40.0% | |
! | TGTTTCGAATTGGTTGACTC+AGG | + | chr8_3:9365137-9365156 | Msa1275430:intron | 40.0% |
! | GTTTCGAATTGGTTGACTCA+GGG | + | chr8_3:9365138-9365157 | Msa1275430:intron | 40.0% |
! | TTTCGAATTGGTTGACTCAG+GGG | + | chr8_3:9365139-9365158 | Msa1275430:intron | 40.0% |
! | GAGATCAGCACCAAGATTTT+TGG | - | chr8_3:9365256-9365275 | None:intergenic | 40.0% |
TCAAAGAGTGATAGCAACCT+TGG | - | chr8_3:9365513-9365532 | None:intergenic | 40.0% | |
AACTATGGCCAACATGCAAT+GGG | - | chr8_3:9365601-9365620 | None:intergenic | 40.0% | |
AAACTATGGCCAACATGCAA+TGG | - | chr8_3:9365602-9365621 | None:intergenic | 40.0% | |
TTGACAGCTCTACATGCAAT+GGG | - | chr8_3:9365707-9365726 | None:intergenic | 40.0% | |
TTTGACAGCTCTACATGCAA+TGG | - | chr8_3:9365708-9365727 | None:intergenic | 40.0% | |
TGCATGTAGAGCTGTCAAAA+CGG | + | chr8_3:9365709-9365728 | Msa1275430:intron | 40.0% | |
!!! | TTAAACCGGGATTTTTAGCC+CGG | - | chr8_3:9365785-9365804 | None:intergenic | 40.0% |
TTCCAGCCCATATTTAAACC+GGG | - | chr8_3:9365798-9365817 | None:intergenic | 40.0% | |
!!! | AAATGTATTTTTTGGCGGGC+TGG | + | chr8_3:9366531-9366550 | Msa1275430:intron | 40.0% |
!!! | TTTTTCAGGGCTTTTTAGCC+CGG | - | chr8_3:9366612-9366631 | None:intergenic | 40.0% |
!!! | TTGCAGCCCGAATTTTTTCA+GGG | - | chr8_3:9366625-9366644 | None:intergenic | 40.0% |
!!! | ATTGCAGCCCGAATTTTTTC+AGG | - | chr8_3:9366626-9366645 | None:intergenic | 40.0% |
CGAAAGCCCGAATAAAATGT+AGG | - | chr8_3:9366663-9366682 | None:intergenic | 40.0% | |
GGCTTGTAAAGCTGTCAAAA+TGG | - | chr8_3:9366707-9366726 | None:intergenic | 40.0% | |
! | GAGTATTGCCTGAGTCAAAA+CGG | - | chr8_3:9366767-9366786 | None:intergenic | 40.0% |
ACTCAGGCAATACTCATAGA+AGG | + | chr8_3:9366772-9366791 | Msa1275430:CDS | 40.0% | |
AATGTCATGGATTTGCGGAA+TGG | + | chr8_3:9366820-9366839 | Msa1275430:CDS | 40.0% | |
TACACCAGAAGAAATAACCC+AGG | + | chr8_3:9366903-9366922 | Msa1275430:CDS | 40.0% | |
! | CGGTACAACCAGATTTTTGT+CGG | - | chr8_3:9367072-9367091 | None:intergenic | 40.0% |
TCTATTAGGAAGACGACTAG+CGG | - | chr8_3:9367092-9367111 | None:intergenic | 40.0% | |
! | AGAATTGATAGCAAGGGCAA+TGG | + | chr8_3:9367225-9367244 | Msa1275430:CDS | 40.0% |
!! | TTTTCAGGATGGGAACACTA+TGG | + | chr8_3:9367358-9367377 | Msa1275430:intron | 40.0% |
GAAGGAATGAAGTTGTCTAG+AGG | + | chr8_3:9367401-9367420 | Msa1275430:CDS | 40.0% | |
!! | ATGATGATGGTATACTTGGG+GGG | + | chr8_3:9367570-9367589 | Msa1275430:intron | 40.0% |
TGTCATGGATGAGGATAAAG+GGG | - | chr8_3:9368018-9368037 | None:intergenic | 40.0% | |
CTTGTCATGGATGAGGATAA+AGG | - | chr8_3:9368020-9368039 | None:intergenic | 40.0% | |
CAGCTCCAATACTTTCAACA+GGG | - | chr8_3:9368062-9368081 | None:intergenic | 40.0% | |
ACAGCTCCAATACTTTCAAC+AGG | - | chr8_3:9368063-9368082 | None:intergenic | 40.0% | |
! | AGTATTGGAGCTGTCAGTAA+CGG | + | chr8_3:9368069-9368088 | Msa1275430:CDS | 40.0% |
GGTCTTACAAACTTGATTGC+TGG | + | chr8_3:9368311-9368330 | Msa1275430:intron | 40.0% | |
CAGAAAGTGAGAGTTGAACT+TGG | - | chr8_3:9368580-9368599 | None:intergenic | 40.0% | |
CGATGTTACATGAGAGTAAG+TGG | + | chr8_3:9369275-9369294 | Msa1275430:intron | 40.0% | |
AGTTCAAACTACCCCCATTA+TGG | - | chr8_3:9369405-9369424 | None:intergenic | 40.0% | |
GTTTGTGCTATAAAAGCTCC+TGG | + | chr8_3:9369894-9369913 | Msa1275430:CDS | 40.0% | |
! | GCTATAAAAGCTCCTGGTTT+TGG | + | chr8_3:9369900-9369919 | Msa1275430:CDS | 40.0% |
GATCTTGCAATTCTTACTGG+AGG | + | chr8_3:9369948-9369967 | Msa1275430:CDS | 40.0% | |
AATGCTTGGCACTGCAAAAA+AGG | + | chr8_3:9370109-9370128 | Msa1275430:CDS | 40.0% | |
GACACTATTGTTCTACATGG+TGG | + | chr8_3:9370226-9370245 | Msa1275430:CDS | 40.0% | |
ACTATTGTTCTACATGGTGG+TGG | + | chr8_3:9370229-9370248 | Msa1275430:CDS | 40.0% | |
CTATTGTTCTACATGGTGGT+GGG | + | chr8_3:9370230-9370249 | Msa1275430:CDS | 40.0% | |
! | TATTGTTCTACATGGTGGTG+GGG | + | chr8_3:9370231-9370250 | Msa1275430:CDS | 40.0% |
TATTGAAGAGAGATGTGTCC+AGG | + | chr8_3:9370264-9370283 | Msa1275430:CDS | 40.0% | |
TATCAACAGCCTGCTATCAA+AGG | - | chr8_3:9370444-9370463 | None:intergenic | 40.0% | |
GGATCTAAACATCTACAGGT+TGG | + | chr8_3:9370696-9370715 | Msa1275430:intron | 40.0% | |
! | TCTAAACATCTACAGGTTGG+TGG | + | chr8_3:9370699-9370718 | Msa1275430:intron | 40.0% |
AAGTTGGGGAAAGGAAAGAT+AGG | + | chr8_3:9370736-9370755 | Msa1275430:CDS | 40.0% | |
AGTTGGGGAAAGGAAAGATA+GGG | + | chr8_3:9370737-9370756 | Msa1275430:CDS | 40.0% | |
AGAGCAGTGTTGTCAAATAG+TGG | + | chr8_3:9370861-9370880 | Msa1275430:intron | 40.0% | |
CAGCCTCTTGTGTAAAAAAC+AGG | + | chr8_3:9371034-9371053 | Msa1275430:intron | 40.0% | |
CGTACAATACACCAAATGGT+GGG | + | chr8_3:9371066-9371085 | Msa1275430:intron | 40.0% | |
AAAAACGAGGATGAGAGAAG+AGG | + | chr8_3:9371334-9371353 | Msa1275430:CDS | 40.0% | |
!!! | GCTTCAAATGCTGGTTTTGA+TGG | + | chr8_3:9371514-9371533 | Msa1275430:CDS | 40.0% |
!! | CCAACAATTTGCTGTGAACT+AGG | - | chr8_3:9371543-9371562 | None:intergenic | 40.0% |
CCTAGTTCACAGCAAATTGT+TGG | + | chr8_3:9371540-9371559 | Msa1275430:CDS | 40.0% | |
!! | TTGGGTTTTGATGCTGCTAA+AGG | + | chr8_3:9371580-9371599 | Msa1275430:CDS | 40.0% |
AGCCTTCACCATATCAACAT+AGG | - | chr8_3:9371771-9371790 | None:intergenic | 40.0% | |
TATGTTGATATGGTGAAGGC+TGG | + | chr8_3:9371770-9371789 | Msa1275430:CDS | 40.0% | |
AGCAACGAAACACTGCATTA+GGG | - | chr8_3:9371928-9371947 | None:intergenic | 40.0% | |
TAGCAACGAAACACTGCATT+AGG | - | chr8_3:9371929-9371948 | None:intergenic | 40.0% | |
ATTCTCCACAATAGATGCCT+CGG | - | chr8_3:9371962-9371981 | None:intergenic | 40.0% | |
ACAAGAATAAACCTCCCCAA+AGG | + | chr8_3:9371989-9372008 | Msa1275430:CDS | 40.0% | |
CAAGAATAAACCTCCCCAAA+GGG | + | chr8_3:9371990-9372009 | Msa1275430:CDS | 40.0% | |
! | CTTTCATCGTTTGTTGAAGC+AGG | - | chr8_3:9372045-9372064 | None:intergenic | 40.0% |
AACTTGGGGGGTCTAATTTA+AGG | + | chr8_3:9372114-9372133 | Msa1275430:three_prime_UTR | 40.0% | |
AGCCTACGATTCAATGTCAT+AGG | + | chr8_3:9372156-9372175 | Msa1275430:three_prime_UTR | 40.0% | |
GCCTACGATTCAATGTCATA+GGG | + | chr8_3:9372157-9372176 | Msa1275430:three_prime_UTR | 40.0% | |
TCCCTATGACATTGAATCGT+AGG | - | chr8_3:9372161-9372180 | None:intergenic | 40.0% | |
TGAGGCTGTCAAAGTTACCA+TGG | + | chr8_3:9364386-9364405 | Msa1275430:CDS | 45.0% | |
GAGGCTGTCAAAGTTACCAT+GGG | + | chr8_3:9364387-9364406 | Msa1275430:CDS | 45.0% | |
TTTGCCACAGACACTTGACA+CGG | + | chr8_3:9364685-9364704 | Msa1275430:intron | 45.0% | |
TGTATGGCAAACACTGACAC+GGG | - | chr8_3:9364766-9364785 | None:intergenic | 45.0% | |
CTGTATGGCAAACACTGACA+CGG | - | chr8_3:9364767-9364786 | None:intergenic | 45.0% | |
TGTTGCTAGTTGCACCGTAT+AGG | + | chr8_3:9364977-9364996 | Msa1275430:intron | 45.0% | |
GCACCGTATAGGTTTGTCAA+TGG | + | chr8_3:9364988-9365007 | Msa1275430:intron | 45.0% | |
CGTATAGGTTTGTCAATGGG+TGG | + | chr8_3:9364992-9365011 | Msa1275430:intron | 45.0% | |
ACTATGGCCAACATGCAATG+GGG | - | chr8_3:9365600-9365619 | None:intergenic | 45.0% | |
TGACAGCTCTACATGCAATG+GGG | - | chr8_3:9365706-9365725 | None:intergenic | 45.0% | |
GCATGTAGAGCTGTCAAAAC+GGG | + | chr8_3:9365710-9365729 | Msa1275430:intron | 45.0% | |
TAAAAAGTCCGTTGCCCGAT+CGG | - | chr8_3:9365759-9365778 | None:intergenic | 45.0% | |
!! | ATCGGGCAACGGACTTTTTA+GGG | + | chr8_3:9365759-9365778 | Msa1275430:intron | 45.0% |
ATCCCGGTTTAAATATGGGC+TGG | + | chr8_3:9365793-9365812 | Msa1275430:intron | 45.0% | |
AAAACTAGATACTTGCGGGC+CGG | - | chr8_3:9365872-9365891 | None:intergenic | 45.0% | |
GGTAGCAAGATATAGCTTCG+TGG | - | chr8_3:9365979-9365998 | None:intergenic | 45.0% | |
TCTTCATCTTCAGTTGTGGG+AGG | + | chr8_3:9366071-9366090 | Msa1275430:intron | 45.0% | |
!! | TGTCTTTGTGTGGCTTGGTT+AGG | - | chr8_3:9366506-9366525 | None:intergenic | 45.0% |
CCGAATAAAATGTAGGGCCT+GGG | - | chr8_3:9366656-9366675 | None:intergenic | 45.0% | |
! | CCCAGGCCCTACATTTTATT+CGG | + | chr8_3:9366653-9366672 | Msa1275430:intron | 45.0% |
! | CCAGGCCCTACATTTTATTC+GGG | + | chr8_3:9366654-9366673 | Msa1275430:intron | 45.0% |
TAAAGCTGTCAAAATGGGCC+GGG | - | chr8_3:9366701-9366720 | None:intergenic | 45.0% | |
GTAAAGCTGTCAAAATGGGC+CGG | - | chr8_3:9366702-9366721 | None:intergenic | 45.0% | |
!!! | TTGTGCAACCGTTTTGACTC+AGG | + | chr8_3:9366756-9366775 | Msa1275430:CDS | 45.0% |
! | TGCTGCTGGTGTTAATGTCA+TGG | + | chr8_3:9366807-9366826 | Msa1275430:CDS | 45.0% |
!! | TGCACCTGGGTTATTTCTTC+TGG | - | chr8_3:9366910-9366929 | None:intergenic | 45.0% |
GAAGAAATAACCCAGGTGCA+AGG | + | chr8_3:9366910-9366929 | Msa1275430:intron | 45.0% | |
CTTGAGAATTCCTTGCACCT+GGG | - | chr8_3:9366923-9366942 | None:intergenic | 45.0% | |
TCTTGAGAATTCCTTGCACC+TGG | - | chr8_3:9366924-9366943 | None:intergenic | 45.0% | |
CAAGGGCAATGGAGAAAGTT+GGG | + | chr8_3:9367236-9367255 | Msa1275430:CDS | 45.0% | |
ATGGAGAAAGTTGGGAAGGA+AGG | + | chr8_3:9367244-9367263 | Msa1275430:CDS | 45.0% | |
!! | TGATGATGGTATACTTGGGG+GGG | + | chr8_3:9367571-9367590 | Msa1275430:intron | 45.0% |
! | GGGTTCCCTGTTGAAAGTAT+TGG | + | chr8_3:9368054-9368073 | Msa1275430:CDS | 45.0% |
AAGACCACTCCTAGTTGTTG+CGG | + | chr8_3:9368187-9368206 | Msa1275430:CDS | 45.0% | |
AGATGTGGACAGTGATGCAT+TGG | + | chr8_3:9368211-9368230 | Msa1275430:CDS | 45.0% | |
ATACTCAACAAGCACCATGC+TGG | + | chr8_3:9368242-9368261 | Msa1275430:CDS | 45.0% | |
TACTCAACAAGCACCATGCT+GGG | + | chr8_3:9368243-9368262 | Msa1275430:CDS | 45.0% | |
! | CAGTAACTTGTAATCAGGGG+CGG | + | chr8_3:9368368-9368387 | Msa1275430:intron | 45.0% |
!!! | ATGGTTTTGATGCTTTGGCC+TGG | + | chr8_3:9368514-9368533 | Msa1275430:intron | 45.0% |
AAAACTCAACCAAAGCCACC+AGG | - | chr8_3:9368535-9368554 | None:intergenic | 45.0% | |
GAGAGTTGAACTTGGGACAT+GGG | - | chr8_3:9368572-9368591 | None:intergenic | 45.0% | |
TGAGAGTTGAACTTGGGACA+TGG | - | chr8_3:9368573-9368592 | None:intergenic | 45.0% | |
AACTAGATTACAAGCAGGGG+CGG | - | chr8_3:9369180-9369199 | None:intergenic | 45.0% | |
TGTTGCTGCTACATGCAACT+TGG | + | chr8_3:9369219-9369238 | Msa1275430:intron | 45.0% | |
GTTGCTGCTACATGCAACTT+GGG | + | chr8_3:9369220-9369239 | Msa1275430:intron | 45.0% | |
CTTCTATTGTCCCCAAAACC+AGG | - | chr8_3:9369915-9369934 | None:intergenic | 45.0% | |
TGCAATTCTTACTGGAGGAG+AGG | + | chr8_3:9369953-9369972 | Msa1275430:CDS | 45.0% | |
TTTGCAGTGCCAAGCATTTC+AGG | - | chr8_3:9370107-9370126 | None:intergenic | 45.0% | |
GTTCTAGTGAGGCAGAAGTT+GGG | + | chr8_3:9370721-9370740 | Msa1275430:CDS | 45.0% | |
TTCTAGTGAGGCAGAAGTTG+GGG | + | chr8_3:9370722-9370741 | Msa1275430:CDS | 45.0% | |
ATAGTGGCACTATAGCGTAG+TGG | + | chr8_3:9370877-9370896 | Msa1275430:intron | 45.0% | |
GACTTGAACCCGTAACCTTT+CGG | - | chr8_3:9371007-9371026 | None:intergenic | 45.0% | |
! | TTACACAAGAGGCTGTTTCC+AGG | - | chr8_3:9371029-9371048 | None:intergenic | 45.0% |
GCTGCGTACAATACACCAAA+TGG | + | chr8_3:9371062-9371081 | Msa1275430:intron | 45.0% | |
GCGTACAATACACCAAATGG+TGG | + | chr8_3:9371065-9371084 | Msa1275430:intron | 45.0% | |
ATCCATATCTGGCACCCTTT+GGG | - | chr8_3:9372007-9372026 | None:intergenic | 45.0% | |
GGTGCCAGATATGGATGATT+TGG | + | chr8_3:9372011-9372030 | Msa1275430:CDS | 45.0% | |
!! | AATGGACTAGAGCAGCGTAA+TGG | + | chr8_3:9372353-9372372 | Msa1275430:three_prime_UTR | 45.0% |
!! | TATATATAAATTATAAACTA+TGG | - | chr8_3:9365616-9365635 | None:intergenic | 5.0% |
!! | TTATATTATTAAAAGTAAAT+TGG | - | chr8_3:9368806-9368825 | None:intergenic | 5.0% |
!! | AAAAAAATATATATATAAAG+GGG | + | chr8_3:9368893-9368912 | Msa1275430:intron | 5.0% |
!! | AGGTGTTTCTGAGGTTGCTG+AGG | + | chr8_3:9364368-9364387 | Msa1275430:CDS | 50.0% |
CAAAGTTACCATGGGACCCA+AGG | + | chr8_3:9364395-9364414 | Msa1275430:CDS | 50.0% | |
AGACAATACCTTGGGTCCCA+TGG | - | chr8_3:9364406-9364425 | None:intergenic | 50.0% | |
TGACAGTGTCGCAGCTTCAT+AGG | - | chr8_3:9364603-9364622 | None:intergenic | 50.0% | |
AAGCTGCGACACTGTCATGT+TGG | + | chr8_3:9364606-9364625 | Msa1275430:intron | 50.0% | |
AGAAAAGCCACAGGAACCCT+AGG | + | chr8_3:9365178-9365197 | Msa1275430:CDS | 50.0% | |
GAAAAGCCACAGGAACCCTA+GGG | + | chr8_3:9365179-9365198 | Msa1275430:CDS | 50.0% | |
AACCCTAGGGTCACAAAGGA+TGG | + | chr8_3:9365192-9365211 | Msa1275430:CDS | 50.0% | |
CACCATCCTTTGTGACCCTA+GGG | - | chr8_3:9365197-9365216 | None:intergenic | 50.0% | |
ACACCATCCTTTGTGACCCT+AGG | - | chr8_3:9365198-9365217 | None:intergenic | 50.0% | |
!! | TGGTGCTGATCTCATCAAGC+AGG | + | chr8_3:9365263-9365282 | Msa1275430:CDS | 50.0% |
TGCTGATCTCATCAAGCAGG+TGG | + | chr8_3:9365266-9365285 | Msa1275430:CDS | 50.0% | |
TCTCATCAAGCAGGTGGCTA+AGG | + | chr8_3:9365272-9365291 | Msa1275430:CDS | 50.0% | |
AAGGCTACCAACAGTACTGC+AGG | + | chr8_3:9365291-9365310 | Msa1275430:CDS | 50.0% | |
ACCAACAGTACTGCAGGAGA+CGG | + | chr8_3:9365297-9365316 | Msa1275430:CDS | 50.0% | |
GTTTCCACCCCATTGCATGT+TGG | + | chr8_3:9365590-9365609 | Msa1275430:intron | 50.0% | |
TGTAGAGCTGTCAAAACGGG+CGG | + | chr8_3:9365713-9365732 | Msa1275430:intron | 50.0% | |
AAAAAGTCCGTTGCCCGATC+GGG | - | chr8_3:9365758-9365777 | None:intergenic | 50.0% | |
!! | GATCGGGCAACGGACTTTTT+AGG | + | chr8_3:9365758-9365777 | Msa1275430:intron | 50.0% |
AAACTAGATACTTGCGGGCC+GGG | - | chr8_3:9365871-9365890 | None:intergenic | 50.0% | |
!!! | TGTATTTTTTGGCGGGCTGG+CGG | + | chr8_3:9366534-9366553 | Msa1275430:intron | 50.0% |
AAAAAGCCCGTAGCCCGTTA+GGG | - | chr8_3:9366585-9366604 | None:intergenic | 50.0% | |
!!! | TAACGGGCTACGGGCTTTTT+CGG | + | chr8_3:9366585-9366604 | Msa1275430:intron | 50.0% |
CCCGAATAAAATGTAGGGCC+TGG | - | chr8_3:9366657-9366676 | None:intergenic | 50.0% | |
! | TTTTATTCGGGCTTTCGGGC+CGG | + | chr8_3:9366666-9366685 | Msa1275430:intron | 50.0% |
ACGGTTGCACAAGTTGTACC+TGG | - | chr8_3:9366748-9366767 | None:intergenic | 50.0% | |
GGATGCAAATCAGTTGCTGC+TGG | + | chr8_3:9366793-9366812 | Msa1275430:CDS | 50.0% | |
! | GCAAATGGGGAGCGTGATAT+TGG | + | chr8_3:9367202-9367221 | Msa1275430:CDS | 50.0% |
GCAAGGGCAATGGAGAAAGT+TGG | + | chr8_3:9367235-9367254 | Msa1275430:CDS | 50.0% | |
GGCAATGGAGAAAGTTGGGA+AGG | + | chr8_3:9367240-9367259 | Msa1275430:CDS | 50.0% | |
TCTTCCGCAACAACTAGGAG+TGG | - | chr8_3:9368194-9368213 | None:intergenic | 50.0% | |
CCACATCTTCCGCAACAACT+AGG | - | chr8_3:9368199-9368218 | None:intergenic | 50.0% | |
CCTAGTTGTTGCGGAAGATG+TGG | + | chr8_3:9368196-9368215 | Msa1275430:CDS | 50.0% | |
CTGTTACCTTAAGCCCAGCA+TGG | - | chr8_3:9368259-9368278 | None:intergenic | 50.0% | |
CATGCTGGGCTTAAGGTAAC+AGG | + | chr8_3:9368257-9368276 | Msa1275430:intron | 50.0% | |
! | GCTGGTTTCGTTGTCTTCTC+TGG | + | chr8_3:9368329-9368348 | Msa1275430:intron | 50.0% |
CGCCCCTGATTACAAGTTAC+TGG | - | chr8_3:9368370-9368389 | None:intergenic | 50.0% | |
!! | GTTTTGATGCTTTGGCCTGG+TGG | + | chr8_3:9368517-9368536 | Msa1275430:intron | 50.0% |
GCATACCTCTCGACAAAGTC+CGG | + | chr8_3:9370081-9370100 | Msa1275430:CDS | 50.0% | |
AAAGTCCGGCCTGAAATGCT+TGG | + | chr8_3:9370095-9370114 | Msa1275430:CDS | 50.0% | |
GGCACTGCAAAAAAGGCAAG+TGG | + | chr8_3:9370116-9370135 | Msa1275430:intron | 50.0% | |
GAACGGCTGTCAAAACTCTC+TGG | + | chr8_3:9370579-9370598 | Msa1275430:CDS | 50.0% | |
!! | ACAGGTTGGTGGTTCTAGTG+AGG | + | chr8_3:9370710-9370729 | Msa1275430:intron | 50.0% |
! | GGTTCTAGTGAGGCAGAAGT+TGG | + | chr8_3:9370720-9370739 | Msa1275430:CDS | 50.0% |
GTTGTTGTCATGTGGCCGAA+AGG | + | chr8_3:9370989-9371008 | Msa1275430:intron | 50.0% | |
GTCATGTGGCCGAAAGGTTA+CGG | + | chr8_3:9370995-9371014 | Msa1275430:intron | 50.0% | |
TCATGTGGCCGAAAGGTTAC+GGG | + | chr8_3:9370996-9371015 | Msa1275430:intron | 50.0% | |
AAGGTTACGGGTTCAAGTCC+TGG | + | chr8_3:9371008-9371027 | Msa1275430:intron | 50.0% | |
! | GACAACCGAGGCATCTATTG+TGG | + | chr8_3:9371954-9371973 | Msa1275430:CDS | 50.0% |
TCCATATCTGGCACCCTTTG+GGG | - | chr8_3:9372006-9372025 | None:intergenic | 50.0% | |
CATCCATATCTGGCACCCTT+TGG | - | chr8_3:9372008-9372027 | None:intergenic | 50.0% | |
! | GCTCGTGCTGCTATGCTTCA+AGG | + | chr8_3:9364348-9364367 | Msa1275430:CDS | 55.0% |
GAAGCCGTGTCAAGTGTCTG+TGG | - | chr8_3:9364692-9364711 | None:intergenic | 55.0% | |
AGGCGTGTCAGGTGTCTGTA+TGG | - | chr8_3:9364782-9364801 | None:intergenic | 55.0% | |
AGGCGTGTCAAGTGTCTCTG+TGG | - | chr8_3:9364871-9364890 | None:intergenic | 55.0% | |
TTGTGACCCTAGGGTTCCTG+TGG | - | chr8_3:9365188-9365207 | None:intergenic | 55.0% | |
CAGGAACCCTAGGGTCACAA+AGG | + | chr8_3:9365188-9365207 | Msa1275430:CDS | 55.0% | |
ACCGTCTCCTGCAGTACTGT+TGG | - | chr8_3:9365301-9365320 | None:intergenic | 55.0% | |
ATGGCCAACATGCAATGGGG+TGG | - | chr8_3:9365597-9365616 | None:intergenic | 55.0% | |
CAGCTCTACATGCAATGGGG+TGG | - | chr8_3:9365703-9365722 | None:intergenic | 55.0% | |
!!! | GGCAACGGACTTTTTAGGGC+CGG | + | chr8_3:9365763-9365782 | Msa1275430:intron | 55.0% |
!!! | GCAACGGACTTTTTAGGGCC+GGG | + | chr8_3:9365764-9365783 | Msa1275430:intron | 55.0% |
TAGGGCCGGGCTAAAAATCC+CGG | + | chr8_3:9365777-9365796 | Msa1275430:intron | 55.0% | |
!!! | GTATTTTTTGGCGGGCTGGC+GGG | + | chr8_3:9366535-9366554 | Msa1275430:intron | 55.0% |
GAAAAAGCCCGTAGCCCGTT+AGG | - | chr8_3:9366586-9366605 | None:intergenic | 55.0% | |
!!! | AACGGGCTACGGGCTTTTTC+GGG | + | chr8_3:9366586-9366605 | Msa1275430:intron | 55.0% |
CAAGCACCATGCTGGGCTTA+AGG | + | chr8_3:9368250-9368269 | Msa1275430:CDS | 55.0% | |
! | AAAAAGGGTTTGGGCTGGGC+TGG | - | chr8_3:9368427-9368446 | None:intergenic | 55.0% |
ATGCTTTGGCCTGGTGGCTT+TGG | + | chr8_3:9368523-9368542 | Msa1275430:intron | 55.0% | |
TTACAAGCAGGGGCGGATCT+GGG | - | chr8_3:9369173-9369192 | None:intergenic | 55.0% | |
ATTACAAGCAGGGGCGGATC+TGG | - | chr8_3:9369174-9369193 | None:intergenic | 55.0% | |
CAGGTCATCACAGAAGAGCG+TGG | + | chr8_3:9370059-9370078 | Msa1275430:intron | 55.0% | |
CAGTGCCAAGCATTTCAGGC+CGG | - | chr8_3:9370103-9370122 | None:intergenic | 55.0% | |
CGGCTGTCAAAACTCTCTGG+CGG | + | chr8_3:9370582-9370601 | Msa1275430:CDS | 55.0% | |
GTGAGGCAGAAGTTGGGGAA+AGG | + | chr8_3:9370727-9370746 | Msa1275430:CDS | 55.0% | |
GAATGCCACTAGAGCAGCTG+TGG | + | chr8_3:9370773-9370792 | Msa1275430:CDS | 55.0% | |
ACTAGAGCAGCTGTGGAGGA+GGG | + | chr8_3:9370780-9370799 | Msa1275430:CDS | 55.0% | |
!! | GTGGAGGAGGGTATTGTTCC+AGG | + | chr8_3:9370792-9370811 | Msa1275430:CDS | 55.0% |
CATATGCAGGGTCTGGGAAG+GGG | - | chr8_3:9371093-9371112 | None:intergenic | 55.0% | |
GCATATGCAGGGTCTGGGAA+GGG | - | chr8_3:9371094-9371113 | None:intergenic | 55.0% | |
CTTCCCAGACCCTGCATATG+CGG | + | chr8_3:9371093-9371112 | Msa1275430:intron | 55.0% | |
TTCCCAGACCCTGCATATGC+GGG | + | chr8_3:9371094-9371113 | Msa1275430:intron | 55.0% | |
CTGAAGCTCCCGCATATGCA+GGG | - | chr8_3:9371105-9371124 | None:intergenic | 55.0% | |
ACTGAAGCTCCCGCATATGC+AGG | - | chr8_3:9371106-9371125 | None:intergenic | 55.0% | |
ATGCGGGAGCTTCAGTGCAT+CGG | + | chr8_3:9371110-9371129 | Msa1275430:intron | 55.0% | |
! | CAGCTTTGGTAGATGCTGCC+AGG | + | chr8_3:9371822-9371841 | Msa1275430:CDS | 55.0% |
GTTGCTACTGACGACAACCG+AGG | + | chr8_3:9371942-9371961 | Msa1275430:CDS | 55.0% | |
! | ATATCTGGCACCCTTTGGGG+AGG | - | chr8_3:9372003-9372022 | None:intergenic | 55.0% |
!! | TCCCCAAAGGGTGCCAGATA+TGG | + | chr8_3:9372002-9372021 | Msa1275430:CDS | 55.0% |
GGAATAATCGAGCCCGAGCC+CGG | + | chr8_3:9365814-9365833 | Msa1275430:intron | 60.0% | |
TTAGCCCGGGAGCCCGTATA+GGG | - | chr8_3:9365840-9365859 | None:intergenic | 60.0% | |
TATACGGGCTCCCGGGCTAA+CGG | + | chr8_3:9365840-9365859 | Msa1275430:intron | 60.0% | |
GGGCTGCAATTATTCGGCCC+AGG | + | chr8_3:9366636-9366655 | Msa1275430:intron | 60.0% | |
TCAAAATGGGCCGGGCCGTA+CGG | - | chr8_3:9366693-9366712 | None:intergenic | 60.0% | |
AATCAGGGGCGGATCTGAGC+AGG | + | chr8_3:9368379-9368398 | Msa1275430:intron | 60.0% | |
ATCAGGGGCGGATCTGAGCA+GGG | + | chr8_3:9368380-9368399 | Msa1275430:intron | 60.0% | |
TCAGGCCGGACTTTGTCGAG+AGG | - | chr8_3:9370089-9370108 | None:intergenic | 60.0% | |
TGCCACTAGAGCAGCTGTGG+AGG | + | chr8_3:9370776-9370795 | Msa1275430:CDS | 60.0% | |
CTCCTCCACAGCTGCTCTAG+TGG | - | chr8_3:9370781-9370800 | None:intergenic | 60.0% | |
CACTAGAGCAGCTGTGGAGG+AGG | + | chr8_3:9370779-9370798 | Msa1275430:CDS | 60.0% | |
TGGGAAGGGGTCCCACCATT+TGG | - | chr8_3:9371080-9371099 | None:intergenic | 60.0% | |
CGCATATGCAGGGTCTGGGA+AGG | - | chr8_3:9371095-9371114 | None:intergenic | 60.0% | |
CTCCCGCATATGCAGGGTCT+GGG | - | chr8_3:9371099-9371118 | None:intergenic | 60.0% | |
TGCGGGAGCTTCAGTGCATC+GGG | + | chr8_3:9371111-9371130 | Msa1275430:intron | 60.0% | |
AGCTGTCAAAACGGGCGGCC+CGG | + | chr8_3:9365718-9365737 | Msa1275430:intron | 65.0% | |
GTTAGCCCGGGAGCCCGTAT+AGG | - | chr8_3:9365841-9365860 | None:intergenic | 65.0% | |
TAGATACTTGCGGGCCGGGC+CGG | - | chr8_3:9365867-9365886 | None:intergenic | 65.0% | |
!!! | GGCTACGGGCTTTTTCGGGC+CGG | + | chr8_3:9366590-9366609 | Msa1275430:intron | 65.0% |
!!! | GCTACGGGCTTTTTCGGGCC+GGG | + | chr8_3:9366591-9366610 | Msa1275430:intron | 65.0% |
CAAAATGGGCCGGGCCGTAC+GGG | - | chr8_3:9366692-9366711 | None:intergenic | 65.0% | |
GATCTGAGCAGGGCAGGGTG+TGG | + | chr8_3:9368390-9368409 | Msa1275430:intron | 65.0% | |
GCTCCCGCATATGCAGGGTC+TGG | - | chr8_3:9371100-9371119 | None:intergenic | 65.0% | |
CCGATCGGGCCGGGCCTAAA+GGG | - | chr8_3:9365744-9365763 | None:intergenic | 70.0% | |
CCCTTTAGGCCCGGCCCGAT+CGG | + | chr8_3:9365741-9365760 | Msa1275430:intron | 70.0% | |
CCTTTAGGCCCGGCCCGATC+GGG | + | chr8_3:9365742-9365761 | Msa1275430:intron | 70.0% | |
AGTCCGTTGCCCGATCGGGC+CGG | - | chr8_3:9365754-9365773 | None:intergenic | 70.0% | |
AGCCCGAGCCCGGCCCTATA+CGG | + | chr8_3:9365824-9365843 | Msa1275430:intron | 70.0% | |
AGCCCGTATAGGGCCGGGCT+CGG | - | chr8_3:9365830-9365849 | None:intergenic | 70.0% | |
AGATACTTGCGGGCCGGGCC+GGG | - | chr8_3:9365866-9365885 | None:intergenic | 70.0% | |
AGCCCGTAGCCCGTTAGGGC+CGG | - | chr8_3:9366581-9366600 | None:intergenic | 70.0% | |
GGGCGGATCTGAGCAGGGCA+GGG | + | chr8_3:9368385-9368404 | Msa1275430:intron | 70.0% | |
!! | GGGTTTGGGCTGGGCTGGTG+TGG | - | chr8_3:9368422-9368441 | None:intergenic | 70.0% |
AACGGGCGGCCCGGCCCTTT+AGG | + | chr8_3:9365727-9365746 | Msa1275430:intron | 75.0% | |
TCGGGCCGGGCCTAAAGGGC+CGG | - | chr8_3:9365740-9365759 | None:intergenic | 75.0% | |
CCCGATCGGGCCGGGCCTAA+AGG | - | chr8_3:9365745-9365764 | None:intergenic | 75.0% | |
GTCCGTTGCCCGATCGGGCC+GGG | - | chr8_3:9365753-9365772 | None:intergenic | 75.0% | |
GCCCGAGCCCGGCCCTATAC+GGG | + | chr8_3:9365825-9365844 | Msa1275430:intron | 75.0% | |
GCCCGTATAGGGCCGGGCTC+GGG | - | chr8_3:9365829-9365848 | None:intergenic | 75.0% | |
CCGGGAGCCCGTATAGGGCC+GGG | - | chr8_3:9365835-9365854 | None:intergenic | 75.0% | |
CCCGGCCCTATACGGGCTCC+CGG | + | chr8_3:9365832-9365851 | Msa1275430:intron | 75.0% | |
CCCGGGAGCCCGTATAGGGC+CGG | - | chr8_3:9365836-9365855 | None:intergenic | 75.0% | |
CCGGCCCTATACGGGCTCCC+GGG | + | chr8_3:9365833-9365852 | Msa1275430:intron | 75.0% | |
CCGTTAGGGCCGGCCCGTTC+GGG | - | chr8_3:9366571-9366590 | None:intergenic | 75.0% | |
CCCGAACGGGCCGGCCCTAA+CGG | + | chr8_3:9366568-9366587 | Msa1275430:intron | 75.0% | |
CCCGTTAGGGCCGGCCCGTT+CGG | - | chr8_3:9366572-9366591 | None:intergenic | 75.0% | |
CCGAACGGGCCGGCCCTAAC+GGG | + | chr8_3:9366569-9366588 | Msa1275430:intron | 75.0% | |
!! | GGGCCGGCCCTAACGGGCTA+CGG | + | chr8_3:9366575-9366594 | Msa1275430:intron | 75.0% |
!! | GGCCGGCCCTAACGGGCTAC+GGG | + | chr8_3:9366576-9366595 | Msa1275430:intron | 75.0% |
GGCTTTCGGGCCGGCCCGTA+CGG | + | chr8_3:9366675-9366694 | Msa1275430:intron | 75.0% | |
GGGGCGGATCTGAGCAGGGC+AGG | + | chr8_3:9368384-9368403 | Msa1275430:intron | 75.0% | |
! | GCGGCCCGGCCCTTTAGGCC+CGG | + | chr8_3:9365732-9365751 | Msa1275430:intron | 80.0% |
! | CGGGCCGGGCCTAAAGGGCC+GGG | - | chr8_3:9365739-9365758 | None:intergenic | 80.0% |
! | GGCCCGGCCCGATCGGGCAA+CGG | + | chr8_3:9365748-9365767 | Msa1275430:intron | 80.0% |
! | GGGCTCCCGGGCTAACGGCC+CGG | + | chr8_3:9365845-9365864 | Msa1275430:intron | 80.0% |
! | ATGGGCCGGGCCGTACGGGC+CGG | - | chr8_3:9366688-9366707 | None:intergenic | 80.0% |
! | CCGGGCCGGGCCGTTAGCCC+GGG | - | chr8_3:9365853-9365872 | None:intergenic | 85.0% |
! | CCCGGGCTAACGGCCCGGCC+CGG | + | chr8_3:9365850-9365869 | Msa1275430:intron | 85.0% |
! | GCCGGGCCGGGCCGTTAGCC+CGG | - | chr8_3:9365854-9365873 | None:intergenic | 85.0% |
! | CGGGCCGCCCGGAGCCCGAA+CGG | + | chr8_3:9366554-9366573 | Msa1275430:intron | 85.0% |
! | GGGCCGCCCGGAGCCCGAAC+GGG | + | chr8_3:9366555-9366574 | Msa1275430:intron | 85.0% |
! | CGGCCCGTTCGGGCTCCGGG+CGG | - | chr8_3:9366561-9366580 | None:intergenic | 85.0% |
! | CGCCCGGAGCCCGAACGGGC+CGG | + | chr8_3:9366559-9366578 | Msa1275430:intron | 85.0% |
! | GGCCGGCCCGTTCGGGCTCC+GGG | - | chr8_3:9366564-9366583 | None:intergenic | 85.0% |
! | GGGCCGGCCCGTTCGGGCTC+CGG | - | chr8_3:9366565-9366584 | None:intergenic | 85.0% |
! | TCGGGCCGGCCCGTACGGCC+CGG | + | chr8_3:9366680-9366699 | Msa1275430:intron | 85.0% |
!!! | TGGCGGGCTGGCGGGCCGCC+CGG | + | chr8_3:9366543-9366562 | Msa1275430:intron | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 9363834 | 9372539 | 9363834 | ID=Msa1275430;Name=Msa1275430 |
chr8_3 | mRNA | 9363834 | 9372539 | 9363834 | ID=Msa1275430-mRNA-1;Parent=Msa1275430;Name=Msa1275430-mRNA-1;_AED=0.12;_eAED=0.12;_QI=209|1|1|1|1|1|17|498|576 |
chr8_3 | exon | 9363834 | 9364108 | 9363834 | ID=Msa1275430-mRNA-1:exon:3925;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9364285 | 9364416 | 9364285 | ID=Msa1275430-mRNA-1:exon:3926;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9365159 | 9365318 | 9365159 | ID=Msa1275430-mRNA-1:exon:3927;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9366749 | 9366924 | 9366749 | ID=Msa1275430-mRNA-1:exon:3928;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9367187 | 9367282 | 9367187 | ID=Msa1275430-mRNA-1:exon:3929;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9367365 | 9367469 | 9367365 | ID=Msa1275430-mRNA-1:exon:3930;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9368004 | 9368090 | 9368004 | ID=Msa1275430-mRNA-1:exon:3931;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9368182 | 9368271 | 9368182 | ID=Msa1275430-mRNA-1:exon:3932;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9369894 | 9369974 | 9369894 | ID=Msa1275430-mRNA-1:exon:3933;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9370062 | 9370130 | 9370062 | ID=Msa1275430-mRNA-1:exon:3934;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9370208 | 9370285 | 9370208 | ID=Msa1275430-mRNA-1:exon:3935;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9370525 | 9370620 | 9370525 | ID=Msa1275430-mRNA-1:exon:3936;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9370714 | 9370813 | 9370714 | ID=Msa1275430-mRNA-1:exon:3937;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9371281 | 9371384 | 9371281 | ID=Msa1275430-mRNA-1:exon:3938;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9371496 | 9371601 | 9371496 | ID=Msa1275430-mRNA-1:exon:3939;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9371765 | 9371843 | 9371765 | ID=Msa1275430-mRNA-1:exon:3940;Parent=Msa1275430-mRNA-1 |
chr8_3 | exon | 9371936 | 9372539 | 9371936 | ID=Msa1275430-mRNA-1:exon:3941;Parent=Msa1275430-mRNA-1 |
chr8_3 | five_prime_UTR | 9363834 | 9364042 | 9363834 | ID=Msa1275430-mRNA-1:five_prime_utr;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9364043 | 9364108 | 9364043 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9364285 | 9364416 | 9364285 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9365159 | 9365318 | 9365159 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9366749 | 9366924 | 9366749 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9367187 | 9367282 | 9367187 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9367365 | 9367469 | 9367365 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9368004 | 9368090 | 9368004 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9368182 | 9368271 | 9368182 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9369894 | 9369974 | 9369894 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9370062 | 9370130 | 9370062 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9370208 | 9370285 | 9370208 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9370525 | 9370620 | 9370525 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9370714 | 9370813 | 9370714 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9371281 | 9371384 | 9371281 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9371496 | 9371601 | 9371496 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9371765 | 9371843 | 9371765 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | CDS | 9371936 | 9372041 | 9371936 | ID=Msa1275430-mRNA-1:cds;Parent=Msa1275430-mRNA-1 |
chr8_3 | three_prime_UTR | 9372042 | 9372539 | 9372042 | ID=Msa1275430-mRNA-1:three_prime_utr;Parent=Msa1275430-mRNA-1 |
Gene Sequence |
Protein sequence |