Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276110 | XP_013444428.1 | 96.329 | 681 | 6 | 3 | 1 | 666 | 1 | 677 | 0.0 | 1350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276110 | sp|Q9FNA9|PDAT1_ARATH | 72.368 | 684 | 158 | 6 | 1 | 666 | 1 | 671 | 0.0 | 1021 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276110 | A0A072TNQ7 | 96.329 | 681 | 6 | 3 | 1 | 666 | 1 | 677 | 0.0 | 1350 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006820 | Msa1276110 | 0.826513 | 2.603955e-54 | -8.615850e-47 |
| Msa0008350 | Msa1276110 | 0.802872 | 4.563994e-49 | -8.615850e-47 |
| Msa0008850 | Msa1276110 | 0.814628 | 1.398297e-51 | -8.615850e-47 |
| Msa0050500 | Msa1276110 | 0.822665 | 2.097854e-53 | -8.615850e-47 |
| Msa0057260 | Msa1276110 | 0.858502 | 7.885384e-63 | -8.615850e-47 |
| Msa0100910 | Msa1276110 | 0.802220 | 6.220062e-49 | -8.615850e-47 |
| Msa0103060 | Msa1276110 | 0.807421 | 5.096493e-50 | -8.615850e-47 |
| Msa0617830 | Msa1276110 | 0.820763 | 5.775684e-53 | -8.615850e-47 |
| Msa0620750 | Msa1276110 | 0.827239 | 1.746279e-54 | -8.615850e-47 |
| Msa0626230 | Msa1276110 | 0.800020 | 1.753268e-48 | -8.615850e-47 |
| Msa0631840 | Msa1276110 | 0.803224 | 3.861034e-49 | -8.615850e-47 |
| Msa0656680 | Msa1276110 | 0.813907 | 2.018133e-51 | -8.615850e-47 |
| Msa0686610 | Msa1276110 | 0.800290 | 1.544447e-48 | -8.615850e-47 |
| Msa0824770 | Msa1276110 | 0.809155 | 2.176255e-50 | -8.615850e-47 |
| Msa0230980 | Msa1276110 | 0.820992 | 5.115768e-53 | -8.615850e-47 |
| Msa1233820 | Msa1276110 | 0.987238 | 1.526926e-169 | -8.615850e-47 |
| Msa1259010 | Msa1276110 | 0.801649 | 8.148903e-49 | -8.615850e-47 |
| Msa1276110 | Msa1314330 | 0.856678 | 2.735727e-62 | -8.615850e-47 |
| Msa1276110 | Msa1327820 | 0.842209 | 2.973317e-58 | -8.615850e-47 |
| Msa1276110 | Msa1370650 | 0.827718 | 1.340416e-54 | -8.615850e-47 |
| Msa0423110 | Msa1276110 | 0.807471 | 4.974765e-50 | -8.615850e-47 |
| Msa0427050 | Msa1276110 | 0.822265 | 2.597744e-53 | -8.615850e-47 |
| Msa0428310 | Msa1276110 | 0.806456 | 8.152836e-50 | -8.615850e-47 |
| Msa1080770 | Msa1276110 | 0.807959 | 3.916980e-50 | -8.615850e-47 |
| Msa0270460 | Msa1276110 | 0.816906 | 4.342260e-52 | -8.615850e-47 |
| Msa0309060 | Msa1276110 | 0.827423 | 1.577533e-54 | -8.615850e-47 |
| Msa1178920 | Msa1276110 | 0.890779 | 7.237398e-74 | -8.615850e-47 |
| Msa1195860 | Msa1276110 | 0.806989 | 6.291898e-50 | -8.615850e-47 |
| Msa1208810 | Msa1276110 | 0.811479 | 6.857284e-51 | -8.615850e-47 |
| Msa0534420 | Msa1276110 | 0.800356 | 1.497664e-48 | -8.615850e-47 |
| Msa0576600 | Msa1276110 | 0.808630 | 2.818558e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276110 | MtrunA17_Chr8g0343491 | 96.329 | 681 | 6 | 3 | 1 | 666 | 1 | 677 | 0.0 | 1350 |
| Msa1276110 | MtrunA17_Chr4g0027511 | 52.019 | 644 | 266 | 11 | 55 | 666 | 6 | 638 | 0.0 | 659 |
| Msa1276110 | MtrunA17_Chr6g0462921 | 54.286 | 105 | 31 | 2 | 230 | 334 | 38 | 125 | 3.16e-26 | 104 |
| Msa1276110 | MtrunA17_Chr4g0070721 | 37.963 | 108 | 27 | 2 | 559 | 666 | 35 | 102 | 5.29e-16 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1276110 | AT5G13640.1 | 72.368 | 684 | 158 | 6 | 1 | 666 | 1 | 671 | 0.0 | 1021 |
| Msa1276110 | AT5G13640.3 | 75.479 | 522 | 110 | 3 | 163 | 666 | 6 | 527 | 0.0 | 810 |
| Msa1276110 | AT5G13640.2 | 75.340 | 515 | 109 | 3 | 170 | 666 | 1 | 515 | 0.0 | 796 |
| Msa1276110 | AT3G44830.1 | 55.786 | 674 | 249 | 10 | 26 | 666 | 8 | 665 | 0.0 | 772 |
| Msa1276110 | AT1G04010.1 | 22.774 | 483 | 304 | 17 | 124 | 586 | 44 | 477 | 1.81e-16 | 83.6 |
Find 219 sgRNAs with CRISPR-Local
Find 417 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAATTGCCTTAATATATT+TGG | 0.103968 | 8_3:+10575717 | None:intergenic |
| TAAGATGCACTCAGAATTTC+TGG | 0.156244 | 8_3:-10572572 | Msa1276110:three_prime_UTR |
| TTGGATTCCTCTCCCGTTAC+TGG | 0.191227 | 8_3:-10572807 | Msa1276110:three_prime_UTR |
| TATTTGTAGTGTTCATATTT+AGG | 0.211408 | 8_3:+10574336 | None:intergenic |
| TTGGTTGCATTTGTACTTTA+TGG | 0.241231 | 8_3:-10577947 | Msa1276110:CDS |
| TTGCCGCAGGATACTTTGTT+TGG | 0.248698 | 8_3:-10576109 | Msa1276110:CDS |
| GGTAGTGATCATTTCTCTTA+TGG | 0.264256 | 8_3:-10574381 | Msa1276110:CDS |
| CGGTGCTCATGTTGATATAA+TGG | 0.274500 | 8_3:-10572959 | Msa1276110:CDS |
| TGTTAACAGGGTGCAATTAA+AGG | 0.281345 | 8_3:-10574558 | Msa1276110:intron |
| TGCGTCTTCCTCTCTCCTTT+TGG | 0.281518 | 8_3:+10572778 | None:intergenic |
| CATATTTGTCAGATGCTTCA+TGG | 0.282342 | 8_3:-10572454 | Msa1276110:three_prime_UTR |
| AGGTTGTGGGGTGGTACTTT+TGG | 0.285300 | 8_3:-10577711 | Msa1276110:CDS |
| AAAACAAGATTCAATCCTTC+AGG | 0.299444 | 8_3:-10573054 | Msa1276110:CDS |
| TGTGTCTATTTCTTTCTTAC+CGG | 0.300944 | 8_3:-10572725 | Msa1276110:three_prime_UTR |
| ATGGAAATCTTCTCTCTATA+TGG | 0.302929 | 8_3:-10573276 | Msa1276110:CDS |
| ACCTCCCAATTCTTCTCCTT+TGG | 0.306639 | 8_3:+10572891 | None:intergenic |
| TTACCGGTGGACTTGAACTT+TGG | 0.316075 | 8_3:-10577770 | Msa1276110:CDS |
| CGCCTTATTTCCACCATTAG+TGG | 0.316185 | 8_3:+10575843 | None:intergenic |
| TTCCACTAATGGTGGAAATA+AGG | 0.317590 | 8_3:-10575845 | Msa1276110:CDS |
| CTTATAAATATAAGCTCTTT+CGG | 0.325469 | 8_3:+10573239 | None:intergenic |
| AGGAGCCAAAGGAGAAGAAT+TGG | 0.328819 | 8_3:-10572896 | Msa1276110:CDS |
| TGTATTCTGATATCTTTAAA+TGG | 0.332543 | 8_3:-10572861 | Msa1276110:CDS |
| GTTACCAAATGCCCCTGATA+TGG | 0.335640 | 8_3:-10573295 | Msa1276110:CDS |
| GACAGTTGTTGTTGGTTTGT+TGG | 0.336488 | 8_3:-10577966 | Msa1276110:CDS |
| GAACTCATGGTTTCCACTAA+TGG | 0.339436 | 8_3:-10575856 | Msa1276110:CDS |
| TTTGTTCCCGGGATTGTTAC+CGG | 0.341600 | 8_3:-10577786 | Msa1276110:CDS |
| AGAGAGAAGATTTCCATATC+AGG | 0.346793 | 8_3:+10573282 | None:intergenic |
| AAAACATTAGATTTGTTGTA+TGG | 0.353623 | 8_3:-10572492 | Msa1276110:three_prime_UTR |
| GAAATTCTGAGTGCATCTTA+TGG | 0.353986 | 8_3:+10572575 | None:intergenic |
| CAAAGGGAGGGGACACCATA+TGG | 0.361138 | 8_3:-10575115 | Msa1276110:CDS |
| CCACTCTTTCATTTCTCTAA+AGG | 0.367580 | 8_3:-10572653 | Msa1276110:three_prime_UTR |
| ATTCCAGTGAGTGGCGAAAC+AGG | 0.369077 | 8_3:-10572530 | Msa1276110:three_prime_UTR |
| GTGGACTGAATACCATGATA+TGG | 0.370394 | 8_3:-10574502 | Msa1276110:CDS |
| TTGTCACCACCATCGGCATT+AGG | 0.371415 | 8_3:+10573174 | None:intergenic |
| AATATGAACACTACAAATAT+TGG | 0.371581 | 8_3:-10574332 | Msa1276110:CDS |
| AATAAAACAAATGTTAACTA+TGG | 0.372300 | 8_3:-10575002 | Msa1276110:CDS |
| ATTTCCATATCAGGGGCATT+TGG | 0.379794 | 8_3:+10573291 | None:intergenic |
| TACCGGTGGACTTGAACTTT+GGG | 0.383614 | 8_3:-10577769 | Msa1276110:CDS |
| CTTCCTGTTTCGCCACTCAC+TGG | 0.394705 | 8_3:+10572527 | None:intergenic |
| TGCCGCAGGATACTTTGTTT+GGG | 0.402404 | 8_3:-10576108 | Msa1276110:CDS |
| AAAAGCCCTGCTATAGCCTT+TGG | 0.405655 | 8_3:+10575667 | None:intergenic |
| CCTCCACCACCCATTGGAGC+TGG | 0.407920 | 8_3:+10575757 | None:intergenic |
| GTCACAAGGGCGATTGCACC+AGG | 0.412573 | 8_3:-10575227 | Msa1276110:intron |
| AAATCTCACTTTGTCTCCAA+TGG | 0.415645 | 8_3:+10574303 | None:intergenic |
| ATTAGAGTCCGGCCTGTCTC+AGG | 0.417705 | 8_3:-10576152 | Msa1276110:CDS |
| AGAAGAATTGGGAGGTGATA+AGG | 0.418018 | 8_3:-10572884 | Msa1276110:CDS |
| ACCGTTCCAGTTCTAAGTTC+AGG | 0.418808 | 8_3:-10573105 | Msa1276110:CDS |
| CTTGTGTTGACAGTTGTTGT+TGG | 0.423297 | 8_3:-10577974 | Msa1276110:CDS |
| ATATATTTGGAACACCAATC+TGG | 0.423493 | 8_3:+10575730 | None:intergenic |
| CCTCCAGCCAACCTGCTAGA+AGG | 0.424011 | 8_3:-10572997 | Msa1276110:CDS |
| GATTGTTTAGGAAGAGGTTG+TGG | 0.424470 | 8_3:-10577725 | Msa1276110:CDS |
| GTGTTCCTCTACCTTCTAGC+AGG | 0.427920 | 8_3:+10572986 | None:intergenic |
| AATTTCAAACCAGGTGGATC+AGG | 0.428308 | 8_3:+10577846 | None:intergenic |
| TATGGAAGAATGATATCGTT+TGG | 0.432064 | 8_3:-10574984 | Msa1276110:CDS |
| CATTGATTGAAGATGTTATG+AGG | 0.435282 | 8_3:-10572927 | Msa1276110:CDS |
| GGTTTGAAATTGAAGAAAGA+AGG | 0.435600 | 8_3:-10577834 | Msa1276110:CDS |
| AATCTCACTTTGTCTCCAAT+GGG | 0.435990 | 8_3:+10574304 | None:intergenic |
| CCATATGGGGCGGCCTTGAT+TGG | 0.437777 | 8_3:-10575100 | Msa1276110:CDS |
| TATGTCACTGAGGCTATAAC+TGG | 0.439467 | 8_3:-10577876 | Msa1276110:CDS |
| GGTGCTCATGTTGATATAAT+GGG | 0.440547 | 8_3:-10572958 | Msa1276110:CDS |
| CATATGGTGTCCCCTCCCTT+TGG | 0.441069 | 8_3:+10575116 | None:intergenic |
| TTGGTGTTCCAAATATATTA+AGG | 0.441232 | 8_3:-10575725 | Msa1276110:CDS |
| GCTTTACTCGCAAAGGGGTG+TGG | 0.443355 | 8_3:+10572687 | None:intergenic |
| AAAAGGGTCAGAACCAGAAA+AGG | 0.444668 | 8_3:-10578138 | Msa1276110:CDS |
| CTACCTTCTAGCAGGTTGGC+TGG | 0.446447 | 8_3:+10572994 | None:intergenic |
| GCTCCAATGGGTGGTGGAGG+AGG | 0.446584 | 8_3:-10575754 | Msa1276110:CDS |
| AAGTTACCTTTGTGAGGGGT+TGG | 0.447573 | 8_3:-10572826 | Msa1276110:exon |
| ATGTCCCTCGACAATGAAAC+AGG | 0.448523 | 8_3:-10576191 | Msa1276110:CDS |
| GTTTGTTGCTCCTAAAATGA+TGG | 0.451458 | 8_3:-10574409 | Msa1276110:CDS |
| TGCTTTGCTTTCTCGTGTGA+AGG | 0.451646 | 8_3:+10575057 | None:intergenic |
| GGCGGTCCTAATTGCTAACT+TGG | 0.452626 | 8_3:-10576087 | Msa1276110:CDS |
| TTTCCTCTGGTGACCAATCA+AGG | 0.454472 | 8_3:+10575087 | None:intergenic |
| GCTTTGATCCGAAGAAGAAA+AGG | 0.454828 | 8_3:-10578155 | Msa1276110:CDS |
| CCAATCAAGGCCGCCCCATA+TGG | 0.454908 | 8_3:+10575100 | None:intergenic |
| CATTCTGCTTTACTCGCAAA+GGG | 0.458260 | 8_3:+10572681 | None:intergenic |
| ATGTAGCCTGAACTTAGAAC+TGG | 0.463062 | 8_3:+10573099 | None:intergenic |
| GTTATTATTCCACATTCGAT+GGG | 0.463783 | 8_3:-10575820 | Msa1276110:CDS |
| GGTCCTCCTCCACCACCCAT+TGG | 0.468600 | 8_3:+10575751 | None:intergenic |
| CCAGCTCCAATGGGTGGTGG+AGG | 0.468894 | 8_3:-10575757 | Msa1276110:CDS |
| TGTGTTACAGACCTTCATGC+TGG | 0.470900 | 8_3:-10576223 | Msa1276110:intron |
| CCATTCCTGTTTCATTGTCG+AGG | 0.473998 | 8_3:+10576186 | None:intergenic |
| TAAATATAAGCTCTTTCGGT+TGG | 0.474291 | 8_3:+10573243 | None:intergenic |
| TGTACATGGCTGCATATGAT+TGG | 0.475105 | 8_3:-10576037 | Msa1276110:CDS |
| CAAGAGGTATTTGCAACATT+GGG | 0.475576 | 8_3:+10574534 | None:intergenic |
| GAGAGAAGATTTCCATATCA+GGG | 0.475876 | 8_3:+10573283 | None:intergenic |
| TCCTCTACCTTCTAGCAGGT+TGG | 0.476959 | 8_3:+10572990 | None:intergenic |
| GGTGTTCCAAAGGCTATAGC+AGG | 0.481359 | 8_3:-10575673 | Msa1276110:CDS |
| GGTTGAAGCACCAGCTCCAA+TGG | 0.483423 | 8_3:-10575767 | Msa1276110:CDS |
| ACCTTGCAACAGCAATGTCT+CGG | 0.492893 | 8_3:+10575632 | None:intergenic |
| AAGTCCACCGGTAACAATCC+CGG | 0.497142 | 8_3:+10577779 | None:intergenic |
| CGGTGGACTTGAACTTTGGG+AGG | 0.499887 | 8_3:-10577766 | Msa1276110:CDS |
| GAACATAAAGTTTACACAGC+TGG | 0.501037 | 8_3:-10574453 | Msa1276110:CDS |
| GGTTATTATTCCACATTCGA+TGG | 0.501585 | 8_3:-10575821 | Msa1276110:CDS |
| TCAGGCTACATGTGTGCTAA+AGG | 0.504236 | 8_3:-10573087 | Msa1276110:CDS |
| GCATTAGGATCAATTTCAAA+AGG | 0.506029 | 8_3:+10573189 | None:intergenic |
| TTTGTGAAGGTAGTGAGAGA+AGG | 0.506488 | 8_3:+10578523 | None:intergenic |
| TATAAGCTCTTTCGGTTGGT+AGG | 0.506491 | 8_3:+10573247 | None:intergenic |
| GATGGTGTCTACACTGTTGA+TGG | 0.507653 | 8_3:-10573135 | Msa1276110:CDS |
| CAAATATTGGTCAAACCCAT+TGG | 0.508140 | 8_3:-10574319 | Msa1276110:CDS |
| AAAGGGAGGGGACACCATAT+GGG | 0.509172 | 8_3:-10575114 | Msa1276110:CDS |
| ATTCCTCTCCCGTTACTGGA+TGG | 0.510025 | 8_3:-10572803 | Msa1276110:three_prime_UTR |
| TGAAGGCCACAGCTTTCCTC+TGG | 0.510466 | 8_3:+10575074 | None:intergenic |
| ATTGTTTAGGAAGAGGTTGT+GGG | 0.510693 | 8_3:-10577724 | Msa1276110:CDS |
| GGAGCCAAAGGAGAAGAATT+GGG | 0.511925 | 8_3:-10572895 | Msa1276110:CDS |
| TAGGAGCAACAAACTGAAGC+AGG | 0.512817 | 8_3:+10574418 | None:intergenic |
| CTCCCTCGACTCCCATATCA+TGG | 0.515621 | 8_3:+10574490 | None:intergenic |
| GCATTCTGCTTTACTCGCAA+AGG | 0.516241 | 8_3:+10572680 | None:intergenic |
| ACAAGAGGTATTTGCAACAT+TGG | 0.518958 | 8_3:+10574533 | None:intergenic |
| AAGGGAGGGGACACCATATG+GGG | 0.519875 | 8_3:-10575113 | Msa1276110:CDS |
| CATTCCTGTTTCATTGTCGA+GGG | 0.520640 | 8_3:+10576187 | None:intergenic |
| GGAGGGGACACCATATGGGG+CGG | 0.523536 | 8_3:-10575110 | Msa1276110:CDS |
| GCTACATGTGTGCTAAAGGT+TGG | 0.525578 | 8_3:-10573083 | Msa1276110:CDS |
| CCTTGCAACAGCAATGTCTC+GGG | 0.526953 | 8_3:+10575633 | None:intergenic |
| GTTTGAAATTGAAGAAAGAA+GGG | 0.528606 | 8_3:-10577833 | Msa1276110:CDS |
| ATCTTCTCTCTATATGGAGT+TGG | 0.529573 | 8_3:-10573270 | Msa1276110:CDS |
| TCTTTCTTCAATTTCAAACC+AGG | 0.532135 | 8_3:+10577837 | None:intergenic |
| TGCGTGCCAAGTTAGCAATT+AGG | 0.532533 | 8_3:+10576081 | None:intergenic |
| GAGGGGCATCAGTGTGCTGA+AGG | 0.535914 | 8_3:-10577747 | Msa1276110:CDS |
| ATCCACCTGGCATTAGAGTC+CGG | 0.536092 | 8_3:-10576163 | Msa1276110:CDS |
| AGTGTGCTGAAGGATTGTTT+AGG | 0.539602 | 8_3:-10577737 | Msa1276110:CDS |
| AGTCCACCGGTAACAATCCC+GGG | 0.539777 | 8_3:+10577780 | None:intergenic |
| CAAAGGTAACTTGATTCTAT+CGG | 0.540277 | 8_3:+10572837 | None:intergenic |
| TTATGAAGATGACTCGCACT+TGG | 0.542374 | 8_3:-10575160 | Msa1276110:CDS |
| TCTTCTTCGGATCAAAGCCA+TGG | 0.542681 | 8_3:+10578160 | None:intergenic |
| CTGAAGGATTGTTTAGGAAG+AGG | 0.543541 | 8_3:-10577731 | Msa1276110:CDS |
| GTCAATGATACCAAAGGGAG+GGG | 0.543790 | 8_3:-10575126 | Msa1276110:CDS |
| AGGGTTGCAGCAGGAGCCAA+AGG | 0.547037 | 8_3:-10572907 | Msa1276110:CDS |
| GGAATGTAACACTCGGCAAA+GGG | 0.548493 | 8_3:+10573210 | None:intergenic |
| AAAGGGTCAGAACCAGAAAA+GGG | 0.549984 | 8_3:-10578137 | Msa1276110:CDS |
| CTCCCAAAGTTCAAGTCCAC+CGG | 0.550193 | 8_3:+10577767 | None:intergenic |
| GTTGCATTTGTACTTTATGG+TGG | 0.551687 | 8_3:-10577944 | Msa1276110:CDS |
| AGGAATGTAACACTCGGCAA+AGG | 0.554566 | 8_3:+10573209 | None:intergenic |
| GAATCAAGTTACCTTTGTGA+GGG | 0.557059 | 8_3:-10572831 | Msa1276110:exon |
| CTCATGGTTTCCACTAATGG+TGG | 0.558410 | 8_3:-10575853 | Msa1276110:CDS |
| GATGTTATGAGGGTTGCAGC+AGG | 0.559067 | 8_3:-10572916 | Msa1276110:CDS |
| CGCAGGATACTTTGTTTGGG+CGG | 0.559130 | 8_3:-10576105 | Msa1276110:CDS |
| GGTCCTATGCCTGATCCACC+TGG | 0.559473 | 8_3:-10577855 | Msa1276110:CDS |
| ACTAACTTTGTCACCACCAT+CGG | 0.561747 | 8_3:+10573167 | None:intergenic |
| CTTTGATCCGAAGAAGAAAA+GGG | 0.562783 | 8_3:-10578154 | Msa1276110:CDS |
| GCACCAGCTCCAATGGGTGG+TGG | 0.563844 | 8_3:-10575760 | Msa1276110:CDS |
| CGTTACTGGATGGTTCCAAA+AGG | 0.564207 | 8_3:-10572793 | Msa1276110:three_prime_UTR |
| AACAATGTCAATGATACCAA+AGG | 0.566328 | 8_3:-10575132 | Msa1276110:CDS |
| TACCATGATATGGGAGTCGA+GGG | 0.566549 | 8_3:-10574492 | Msa1276110:CDS |
| TTGTTTAGGAAGAGGTTGTG+GGG | 0.567327 | 8_3:-10577723 | Msa1276110:CDS |
| TTCTTCAATTTCAAACCAGG+TGG | 0.569825 | 8_3:+10577840 | None:intergenic |
| ATTGCTAACTTGGCACGCAT+CGG | 0.570105 | 8_3:-10576077 | Msa1276110:CDS |
| ACAATGTCAATGATACCAAA+GGG | 0.570573 | 8_3:-10575131 | Msa1276110:CDS |
| GCAGCTACAAGTCCTGAGAC+AGG | 0.571268 | 8_3:+10576140 | None:intergenic |
| TGGACTGAATACCATGATAT+GGG | 0.579168 | 8_3:-10574501 | Msa1276110:CDS |
| CCTCGACAATGAAACAGGAA+TGG | 0.579478 | 8_3:-10576186 | Msa1276110:CDS |
| TATGAAGATGACTCGCACTT+GGG | 0.579656 | 8_3:-10575159 | Msa1276110:CDS |
| GCTGCTGACTACTTTGCCGC+AGG | 0.579775 | 8_3:-10576122 | Msa1276110:CDS |
| ACATACTGAGGAAATGAAGC+TGG | 0.579803 | 8_3:+10577894 | None:intergenic |
| GTGTTACAGACCTTCATGCT+GGG | 0.580352 | 8_3:-10576222 | Msa1276110:intron |
| CCCGAGACATTGCTGTTGCA+AGG | 0.580720 | 8_3:-10575633 | Msa1276110:intron |
| ACATAAGTGCGGATCCCTGA+AGG | 0.582865 | 8_3:+10573039 | None:intergenic |
| AGAATCAAGTTACCTTTGTG+AGG | 0.584227 | 8_3:-10572832 | Msa1276110:exon |
| ATTGATTGAAGATGTTATGA+GGG | 0.584281 | 8_3:-10572926 | Msa1276110:CDS |
| AAACAAGATTCAATCCTTCA+GGG | 0.585693 | 8_3:-10573053 | Msa1276110:CDS |
| ACAGGCCGGACTCTAATGCC+AGG | 0.586620 | 8_3:+10576158 | None:intergenic |
| GTTGAAGCACCAGCTCCAAT+GGG | 0.588758 | 8_3:-10575766 | Msa1276110:CDS |
| ATACCTCTTGTCGTGATGTG+TGG | 0.589412 | 8_3:-10574521 | Msa1276110:CDS |
| CTACAAGTCCTGAGACAGGC+CGG | 0.589884 | 8_3:+10576144 | None:intergenic |
| AAACCAGGTGGATCAGGCAT+AGG | 0.590698 | 8_3:+10577852 | None:intergenic |
| GAACCATCCAGTAACGGGAG+AGG | 0.591346 | 8_3:+10572800 | None:intergenic |
| GTGGATCCTCTCGATAGTAC+CGG | 0.592563 | 8_3:+10572706 | None:intergenic |
| AAAGTTAGTTGTCTGAAAGA+TGG | 0.594243 | 8_3:-10573153 | Msa1276110:CDS |
| TTATTATTCCACATTCGATG+GGG | 0.597825 | 8_3:-10575819 | Msa1276110:CDS |
| TTCTTACCGGTACTATCGAG+AGG | 0.598025 | 8_3:-10572712 | Msa1276110:three_prime_UTR |
| CACTAATGGTGGAAATAAGG+CGG | 0.599508 | 8_3:-10575842 | Msa1276110:CDS |
| GAAATTGATCCTAATGCCGA+TGG | 0.600115 | 8_3:-10573183 | Msa1276110:CDS |
| AGTCCACACATCACGACAAG+AGG | 0.600708 | 8_3:+10574518 | None:intergenic |
| GCCAACCTGCTAGAAGGTAG+AGG | 0.602621 | 8_3:-10572991 | Msa1276110:CDS |
| ATGTGCTCCACCCAGCATGA+AGG | 0.609066 | 8_3:+10576212 | None:intergenic |
| TGTCAATGATACCAAAGGGA+GGG | 0.611058 | 8_3:-10575127 | Msa1276110:CDS |
| CAAATTCAGATTCCAGTGAG+TGG | 0.611840 | 8_3:-10572539 | Msa1276110:three_prime_UTR |
| TTCAAAAGGAATGTAACACT+CGG | 0.613347 | 8_3:+10573203 | None:intergenic |
| AAGGCAATTGTAAACATCGG+TGG | 0.613847 | 8_3:-10575706 | Msa1276110:CDS |
| CGGCCTTGATTGGTCACCAG+AGG | 0.614675 | 8_3:-10575090 | Msa1276110:CDS |
| GTGGTGGAGGAGGACCAGAT+TGG | 0.615784 | 8_3:-10575744 | Msa1276110:CDS |
| TATTATTCCACATTCGATGG+GGG | 0.616054 | 8_3:-10575818 | Msa1276110:CDS |
| ATTAAGGCAATTGTAAACAT+CGG | 0.616704 | 8_3:-10575709 | Msa1276110:CDS |
| AATCAAGTTACCTTTGTGAG+GGG | 0.617198 | 8_3:-10572830 | Msa1276110:exon |
| GGTGGACTTGAACTTTGGGA+GGG | 0.617610 | 8_3:-10577765 | Msa1276110:CDS |
| ATACCATGATATGGGAGTCG+AGG | 0.618174 | 8_3:-10574493 | Msa1276110:CDS |
| TGCGGGATCAAACACTAAGT+CGG | 0.618626 | 8_3:-10575894 | Msa1276110:CDS |
| GAGTGGCGAAACAGGAAGCA+AGG | 0.618828 | 8_3:-10572522 | Msa1276110:three_prime_UTR |
| TTTAGGAAGAGGTTGTGGGG+TGG | 0.619196 | 8_3:-10577720 | Msa1276110:CDS |
| GCCTGAACTTAGAACTGGAA+CGG | 0.623216 | 8_3:+10573104 | None:intergenic |
| CCTTTAGAGAAATGAAAGAG+TGG | 0.625888 | 8_3:+10572653 | None:intergenic |
| ATGTGTGCTAAAGGTTGGCG+CGG | 0.631669 | 8_3:-10573078 | Msa1276110:CDS |
| GTGGACTTGAACTTTGGGAG+GGG | 0.645485 | 8_3:-10577764 | Msa1276110:CDS |
| GAAGCACCAGCTCCAATGGG+TGG | 0.650096 | 8_3:-10575763 | Msa1276110:CDS |
| CCTTCTAGCAGGTTGGCTGG+AGG | 0.650840 | 8_3:+10572997 | None:intergenic |
| CGCCCAAACAAAGTATCCTG+CGG | 0.650887 | 8_3:+10576106 | None:intergenic |
| GTGTTCCAAAGGCTATAGCA+GGG | 0.651360 | 8_3:-10575672 | Msa1276110:CDS |
| TTTGAGAGAAGAAATTGATG+GGG | 0.652309 | 8_3:+10578265 | None:intergenic |
| GAAACAGGAATGGATCCACC+TGG | 0.653090 | 8_3:-10576176 | Msa1276110:CDS |
| TTACAGACCTTCATGCTGGG+TGG | 0.657680 | 8_3:-10576219 | Msa1276110:intron |
| AGAGAAGATTTCCATATCAG+GGG | 0.659632 | 8_3:+10573284 | None:intergenic |
| GGATGGTTCCAAAAGGAGAG+AGG | 0.665716 | 8_3:-10572786 | Msa1276110:three_prime_UTR |
| GTTAAGTGTGAAGCATCCAG+TGG | 0.670636 | 8_3:-10577811 | Msa1276110:CDS |
| AGGAATCCAACCCCTCACAA+AGG | 0.672701 | 8_3:+10572820 | None:intergenic |
| ATGTCAATGATACCAAAGGG+AGG | 0.678379 | 8_3:-10575128 | Msa1276110:CDS |
| GCCAAAGGAGAAGAATTGGG+AGG | 0.678687 | 8_3:-10572892 | Msa1276110:CDS |
| GTTCCCGGGATTGTTACCGG+TGG | 0.680821 | 8_3:-10577783 | Msa1276110:CDS |
| ATAGCCTCAGTGACATACTG+AGG | 0.682133 | 8_3:+10577882 | None:intergenic |
| TGGTCACCAGAGGAAAGCTG+TGG | 0.687949 | 8_3:-10575080 | Msa1276110:CDS |
| CATATTCTCGAACATAAGTG+CGG | 0.688532 | 8_3:+10573028 | None:intergenic |
| CATGTTGCAATGTTTGAATG+CGG | 0.688558 | 8_3:+10575183 | None:intergenic |
| GAAGGTAGAGGAACACAAAG+CGG | 0.691848 | 8_3:-10572979 | Msa1276110:CDS |
| TTAAGAAGAAGAGTACTAGG+TGG | 0.695244 | 8_3:-10577998 | Msa1276110:CDS |
| GGCCGGACTCTAATGCCAGG+TGG | 0.698938 | 8_3:+10576161 | None:intergenic |
| ATTCTGCTTTACTCGCAAAG+GGG | 0.700342 | 8_3:+10572682 | None:intergenic |
| ATTGATCCTAATGCCGATGG+TGG | 0.700702 | 8_3:-10573180 | Msa1276110:CDS |
| TCACAAGGGCGATTGCACCA+GGG | 0.702585 | 8_3:-10575226 | Msa1276110:intron |
| ATTTCCTCAGTATGTCACTG+AGG | 0.706751 | 8_3:-10577886 | Msa1276110:CDS |
| GCTCCTAAAATGATGGCGCG+TGG | 0.719297 | 8_3:-10574402 | Msa1276110:CDS |
| AATATCATTTCAGAACACTG+AGG | 0.773968 | 8_3:-10576012 | Msa1276110:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATAATAATATTTAT+TGG | + | chr8_3:10578097-10578116 | None:intergenic | 0.0% |
| !! | CAAAATCAATTATTAAAATA+AGG | + | chr8_3:10574865-10574884 | None:intergenic | 10.0% |
| !!! | TACTAGTATTTAATTTTAAA+TGG | - | chr8_3:10576950-10576969 | Msa1276110:intron | 10.0% |
| !!! | ACTAGTATTTAATTTTAAAT+GGG | - | chr8_3:10576951-10576970 | Msa1276110:intron | 10.0% |
| !! | ATTCATAATGATTATTTAAT+TGG | + | chr8_3:10577376-10577395 | None:intergenic | 10.0% |
| !!! | AATAGTATTTATATTTTTCT+TGG | + | chr8_3:10577462-10577481 | None:intergenic | 10.0% |
| !!! | TTTTGCTTTTTATTATTTTT+TGG | - | chr8_3:10578443-10578462 | Msa1276110:intron | 10.0% |
| !! | TATATATTTATAACTTTGCT+TGG | - | chr8_3:10573717-10573736 | Msa1276110:intron | 15.0% |
| !! | CAAATGTCAAATATATATTT+CGG | + | chr8_3:10573894-10573913 | None:intergenic | 15.0% |
| !! | TAATAATAACTTAATTGATC+AGG | - | chr8_3:10574931-10574950 | Msa1276110:intron | 15.0% |
| !! | AATAAAACAAATGTTAACTA+TGG | - | chr8_3:10575846-10575865 | Msa1276110:CDS | 15.0% |
| !! | TGTTTGAATTAACTTATTTA+AGG | - | chr8_3:10575969-10575988 | Msa1276110:intron | 15.0% |
| !! | AAATATAAATACTATTCAGT+TGG | - | chr8_3:10577466-10577485 | Msa1276110:intron | 15.0% |
| !! | TTGAATAGGTAATAAAAATA+AGG | + | chr8_3:10577494-10577513 | None:intergenic | 15.0% |
| !!! | AAAAACAACTTTTTTTTCCT+GGG | + | chr8_3:10572617-10572636 | None:intergenic | 20.0% |
| !!! | AAAAAACAACTTTTTTTTCC+TGG | + | chr8_3:10572618-10572637 | None:intergenic | 20.0% |
| !!! | TCTTCTTTTTTCTGAATTTT+TGG | + | chr8_3:10572756-10572775 | None:intergenic | 20.0% |
| !!! | TTTTACATTTGATTTGATGA+TGG | - | chr8_3:10573394-10573413 | Msa1276110:intron | 20.0% |
| !!! | AAATTTATCGATTTAATGCT+AGG | - | chr8_3:10573438-10573457 | Msa1276110:intron | 20.0% |
| !!! | TGTGTTTTTATAATCTTGTT+TGG | - | chr8_3:10573780-10573799 | Msa1276110:intron | 20.0% |
| !!! | ACATTTGATTTGATGATTAT+TGG | - | chr8_3:10573907-10573926 | Msa1276110:intron | 20.0% |
| !!! | TCATTTATTTTGTCTGTTAT+TGG | - | chr8_3:10574113-10574132 | Msa1276110:intron | 20.0% |
| !!! | ATTTTCTTCATTTCATGAAA+TGG | - | chr8_3:10575059-10575078 | Msa1276110:CDS | 20.0% |
| !!! | TTTTCTTCATTTCATGAAAT+GGG | - | chr8_3:10575060-10575079 | Msa1276110:CDS | 20.0% |
| !! | TACAATTGCCTTAATATATT+TGG | + | chr8_3:10575134-10575153 | None:intergenic | 20.0% |
| !! | TTCATAGTTTAAACAATAGA+AGG | + | chr8_3:10575364-10575383 | None:intergenic | 20.0% |
| !! | TTCAGTATCTAAATTGAATT+TGG | - | chr8_3:10575591-10575610 | Msa1276110:intron | 20.0% |
| !! | CAAAACTTGAAATTGATATA+GGG | - | chr8_3:10575944-10575963 | Msa1276110:intron | 20.0% |
| !! | TATTTGTAGTGTTCATATTT+AGG | + | chr8_3:10576515-10576534 | None:intergenic | 20.0% |
| !! | AATATGAACACTACAAATAT+TGG | - | chr8_3:10576516-10576535 | Msa1276110:intron | 20.0% |
| !! | AAATTTCTGAATGAATTCTT+CGG | - | chr8_3:10576625-10576644 | Msa1276110:intron | 20.0% |
| !! | TTAATTAAGCACTTATAACT+TGG | - | chr8_3:10576754-10576773 | Msa1276110:intron | 20.0% |
| !!! | TATTTTAACAACTTCAGATA+TGG | - | chr8_3:10577159-10577178 | Msa1276110:intron | 20.0% |
| !!! | ATCTGTCTAAAGTTAAATAA+CGG | - | chr8_3:10577209-10577228 | Msa1276110:intron | 20.0% |
| !! | CTTATAAATATAAGCTCTTT+CGG | + | chr8_3:10577612-10577631 | None:intergenic | 20.0% |
| !! | TGTATTCTGATATCTTTAAA+TGG | - | chr8_3:10577987-10578006 | Msa1276110:CDS | 20.0% |
| !!! | AAAACATTAGATTTGTTGTA+TGG | - | chr8_3:10578356-10578375 | Msa1276110:intron | 20.0% |
| !!! | TTTGTTGTATGGTAATTTTT+TGG | - | chr8_3:10578367-10578386 | Msa1276110:intron | 20.0% |
| !!! | ATATTTTATAAGATTGAACG+AGG | + | chr8_3:10578538-10578557 | None:intergenic | 20.0% |
| !!! | AGCTATGATTATTTTTGTGA+AGG | + | chr8_3:10572341-10572360 | None:intergenic | 25.0% |
| !!! | TTTTGAGAGAAGAAATTGAT+GGG | + | chr8_3:10572587-10572606 | None:intergenic | 25.0% |
| !!! | TTTTTGAGAGAAGAAATTGA+TGG | + | chr8_3:10572588-10572607 | None:intergenic | 25.0% |
| !!! | TTATTTTTCTCAACAAACTC+TGG | - | chr8_3:10572645-10572664 | Msa1276110:three_prime_UTR | 25.0% |
| !! | TATTTTTCTCAACAAACTCT+GGG | - | chr8_3:10572646-10572665 | Msa1276110:three_prime_UTR | 25.0% |
| ! | AAAGAACAAGAAGAAAAACA+AGG | - | chr8_3:10572812-10572831 | Msa1276110:three_prime_UTR | 25.0% |
| !!! | TTTTTAAGAAGAAGAGTACT+AGG | - | chr8_3:10572847-10572866 | Msa1276110:CDS | 25.0% |
| !! | GTTTGAAATTGAAGAAAGAA+GGG | - | chr8_3:10573015-10573034 | Msa1276110:CDS | 25.0% |
| !!! | CTTTTGGAGAAGTTTATAAA+AGG | - | chr8_3:10573153-10573172 | Msa1276110:CDS | 25.0% |
| !! | TTGTTTGTCTTAATTTGATG+AGG | - | chr8_3:10573231-10573250 | Msa1276110:CDS | 25.0% |
| ! | GAAATTGAATGGTTATGATT+AGG | - | chr8_3:10573337-10573356 | Msa1276110:intron | 25.0% |
| !! | TGTTAGCATGTTTCTATAAT+TGG | - | chr8_3:10573471-10573490 | Msa1276110:intron | 25.0% |
| !! | TCTATACCTTTTATAAGAAC+AGG | + | chr8_3:10573639-10573658 | None:intergenic | 25.0% |
| !! | AGAAAGCTTGTTCTTATAAA+AGG | - | chr8_3:10573674-10573693 | Msa1276110:intron | 25.0% |
| !! | TTGATTTGATGATTATTGGT+TGG | - | chr8_3:10573911-10573930 | Msa1276110:intron | 25.0% |
| !! | CGTTAACATGTTTCTATTAT+TGG | - | chr8_3:10573980-10573999 | Msa1276110:intron | 25.0% |
| ! | TAAATGAAGATCAGAATCAA+AGG | + | chr8_3:10574212-10574231 | None:intergenic | 25.0% |
| ! | TTTGATTCTGATCTTCATTT+AGG | - | chr8_3:10574211-10574230 | Msa1276110:intron | 25.0% |
| ! | ACTGTTCAATTTGAAAGTAA+AGG | - | chr8_3:10574367-10574386 | Msa1276110:CDS | 25.0% |
| ! | CTGTTCAATTTGAAAGTAAA+GGG | - | chr8_3:10574368-10574387 | Msa1276110:CDS | 25.0% |
| ! | GATATTATTTGTCTCACAAA+AGG | + | chr8_3:10574423-10574442 | None:intergenic | 25.0% |
| ! | TGAAGAAAAAACTATGTACA+TGG | - | chr8_3:10574797-10574816 | Msa1276110:intron | 25.0% |
| !!! | AGTGTTCTGAAATAAAAACT+CGG | + | chr8_3:10574890-10574909 | None:intergenic | 25.0% |
| !! | TTGGTGTTCCAAATATATTA+AGG | - | chr8_3:10575123-10575142 | Msa1276110:CDS | 25.0% |
| ! | ATTAAGGCAATTGTAAACAT+CGG | - | chr8_3:10575139-10575158 | Msa1276110:CDS | 25.0% |
| ! | AATTTGTGTTTCCAATTCAA+AGG | + | chr8_3:10575523-10575542 | None:intergenic | 25.0% |
| ! | GCAAAACTTGAAATTGATAT+AGG | - | chr8_3:10575943-10575962 | Msa1276110:intron | 25.0% |
| ! | ACAAGAAAACTGGTAAAATA+AGG | + | chr8_3:10576238-10576257 | None:intergenic | 25.0% |
| !! | TGATTTTGAACTCACAAATA+TGG | + | chr8_3:10576690-10576709 | None:intergenic | 25.0% |
| !! | AACTGTTTTATAAGCTATAC+TGG | - | chr8_3:10576863-10576882 | Msa1276110:intron | 25.0% |
| ! | ATCCAAACAGATAATTTCTT+TGG | - | chr8_3:10576977-10576996 | Msa1276110:intron | 25.0% |
| ! | ATCCAAAGAAATTATCTGTT+TGG | + | chr8_3:10576982-10577001 | None:intergenic | 25.0% |
| ! | AACAGATAATTTCTTTGGAT+TGG | - | chr8_3:10576982-10577001 | Msa1276110:intron | 25.0% |
| ! | TTTGACAGAAATTATGACTT+TGG | - | chr8_3:10577057-10577076 | Msa1276110:intron | 25.0% |
| ! | ATCCAAACTGTATGTTTATA+TGG | + | chr8_3:10577086-10577105 | None:intergenic | 25.0% |
| ! | CTAAATTTCATCATGAATGA+TGG | + | chr8_3:10577297-10577316 | None:intergenic | 25.0% |
| ! | GAATTTGTGAATATTGACAA+TGG | - | chr8_3:10577392-10577411 | Msa1276110:intron | 25.0% |
| ! | AAGACATCAATCAATTGAAT+AGG | + | chr8_3:10577508-10577527 | None:intergenic | 25.0% |
| ! | ATTGATTGAAGATGTTATGA+GGG | - | chr8_3:10577922-10577941 | Msa1276110:CDS | 25.0% |
| ! | TTTGCGATTTGAAATTAGGA+AGG | + | chr8_3:10572440-10572459 | None:intergenic | 30.0% |
| TATTCGCAAATAGCAGTATA+CGG | + | chr8_3:10572501-10572520 | None:intergenic | 30.0% | |
| GAATTTAAGCGAAAATGAGA+AGG | + | chr8_3:10572538-10572557 | None:intergenic | 30.0% | |
| TTTGAGAGAAGAAATTGATG+GGG | + | chr8_3:10572586-10572605 | None:intergenic | 30.0% | |
| TCTCTCAAAAAAATAAACCC+AGG | - | chr8_3:10572597-10572616 | Msa1276110:three_prime_UTR | 30.0% | |
| !!! | TGAATCGATTTTTTGAACCA+TGG | - | chr8_3:10572671-10572690 | Msa1276110:three_prime_UTR | 30.0% |
| TTGGTTGCATTTGTACTTTA+TGG | - | chr8_3:10572901-10572920 | Msa1276110:CDS | 30.0% | |
| TCTTTCTTCAATTTCAAACC+AGG | + | chr8_3:10573014-10573033 | None:intergenic | 30.0% | |
| ! | GGTTTGAAATTGAAGAAAGA+AGG | - | chr8_3:10573014-10573033 | Msa1276110:CDS | 30.0% |
| ATAACTTTGCTTGATTGTGT+TGG | - | chr8_3:10573205-10573224 | Msa1276110:CDS | 30.0% | |
| ! | TCTTAATTTGATGAGGTTGA+TGG | - | chr8_3:10573238-10573257 | Msa1276110:CDS | 30.0% |
| !! | GGTGTTTTTATTGTCTTGTT+TGG | - | chr8_3:10573259-10573278 | Msa1276110:CDS | 30.0% |
| ! | TCTTGTTTGGTATTGTTTAG+TGG | - | chr8_3:10573272-10573291 | Msa1276110:CDS | 30.0% |
| ! | TGGTATTGTTTAGTGGTTTT+TGG | - | chr8_3:10573279-10573298 | Msa1276110:CDS | 30.0% |
| !!! | TGTTTAGTGGTTTTTGGTAT+TGG | - | chr8_3:10573285-10573304 | Msa1276110:CDS | 30.0% |
| ! | TGCTGTGATTTGAAATTGAA+TGG | - | chr8_3:10573326-10573345 | Msa1276110:intron | 30.0% |
| TTGAATGGTTATGATTAGGA+TGG | - | chr8_3:10573341-10573360 | Msa1276110:intron | 30.0% | |
| !! | ACATTTGATTTGATGATGGT+TGG | - | chr8_3:10573398-10573417 | Msa1276110:intron | 30.0% |
| ! | TAGCATGTTTCTATAATTGG+TGG | - | chr8_3:10573474-10573493 | Msa1276110:intron | 30.0% |
| ! | CACTAGTAAATGATTTGGAA+AGG | - | chr8_3:10573500-10573519 | Msa1276110:intron | 30.0% |
| ! | GGAAAGGAACTTATGTTTTA+TGG | - | chr8_3:10573516-10573535 | Msa1276110:intron | 30.0% |
| AGAAAGCCTGTTCTTATAAA+AGG | - | chr8_3:10573630-10573649 | Msa1276110:intron | 30.0% | |
| !!! | TCTTGTTTGGTTTTGTTTAG+TGG | - | chr8_3:10573793-10573812 | Msa1276110:intron | 30.0% |
| ! | TTTGTGAGTGTGTTGTTATT+TGG | - | chr8_3:10573816-10573835 | Msa1276110:intron | 30.0% |
| GGAATTGATTGATTATGATG+AGG | - | chr8_3:10573837-10573856 | Msa1276110:intron | 30.0% | |
| TTGATTGATTATGATGAGGA+TGG | - | chr8_3:10573841-10573860 | Msa1276110:intron | 30.0% | |
| TCTATTATTGGTGAAGACAT+TGG | - | chr8_3:10573992-10574011 | Msa1276110:intron | 30.0% | |
| ! | GTCTGTTATTGGATTTTACT+TGG | - | chr8_3:10574124-10574143 | Msa1276110:intron | 30.0% |
| GATCAGAATCAAAGGTTTAA+AGG | + | chr8_3:10574204-10574223 | None:intergenic | 30.0% | |
| ATTGTGAGTACTTGATTGAT+TGG | - | chr8_3:10574301-10574320 | Msa1276110:intron | 30.0% | |
| AATATCATTTCAGAACACTG+AGG | - | chr8_3:10574836-10574855 | Msa1276110:intron | 30.0% | |
| ATAACTTAATTGATCAGGTG+CGG | - | chr8_3:10574936-10574955 | Msa1276110:intron | 30.0% | |
| AAAAAGCAACATAGAACTCA+TGG | - | chr8_3:10574979-10574998 | Msa1276110:CDS | 30.0% | |
| GTTATTATTCCACATTCGAT+GGG | - | chr8_3:10575028-10575047 | Msa1276110:CDS | 30.0% | |
| TTATTATTCCACATTCGATG+GGG | - | chr8_3:10575029-10575048 | Msa1276110:CDS | 30.0% | |
| ! | ATATATTTGGAACACCAATC+TGG | + | chr8_3:10575121-10575140 | None:intergenic | 30.0% |
| TGCAAGGTATATCTTCTTTA+TGG | - | chr8_3:10575231-10575250 | Msa1276110:intron | 30.0% | |
| ACACAAATTCTGATTGCATT+TGG | - | chr8_3:10575534-10575553 | Msa1276110:intron | 30.0% | |
| ATATCGTTATCTAAAAACCC+TGG | + | chr8_3:10575642-10575661 | None:intergenic | 30.0% | |
| AACAATGTCAATGATACCAA+AGG | - | chr8_3:10575716-10575735 | Msa1276110:CDS | 30.0% | |
| ACAATGTCAATGATACCAAA+GGG | - | chr8_3:10575717-10575736 | Msa1276110:CDS | 30.0% | |
| TATGGAAGAATGATATCGTT+TGG | - | chr8_3:10575864-10575883 | Msa1276110:CDS | 30.0% | |
| !! | AGATCGATATTGTTGACTTT+CGG | - | chr8_3:10575916-10575935 | Msa1276110:intron | 30.0% |
| ! | ACTTATTTAAGGTCATCTAC+CGG | - | chr8_3:10575980-10575999 | Msa1276110:intron | 30.0% |
| AATTAAGCTGTTTATCCAAC+AGG | - | chr8_3:10576186-10576205 | Msa1276110:CDS | 30.0% | |
| ATTAAGCTGTTTATCCAACA+GGG | - | chr8_3:10576187-10576206 | Msa1276110:CDS | 30.0% | |
| CACCATATAAACATACAGTT+TGG | - | chr8_3:10577081-10577100 | Msa1276110:intron | 30.0% | |
| ! | ATCATTATTTTCTCTCACCT+CGG | - | chr8_3:10577111-10577130 | Msa1276110:intron | 30.0% |
| !! | GTAGACTAAACTTATTTCTG+AGG | + | chr8_3:10577259-10577278 | None:intergenic | 30.0% |
| TAATTGGAACATATCAAGAG+CGG | + | chr8_3:10577360-10577379 | None:intergenic | 30.0% | |
| CAACTGTTAATAATATCGAC+AGG | - | chr8_3:10577531-10577550 | Msa1276110:intron | 30.0% | |
| ATGGAAATCTTCTCTCTATA+TGG | - | chr8_3:10577572-10577591 | Msa1276110:intron | 30.0% | |
| TAAATATAAGCTCTTTCGGT+TGG | + | chr8_3:10577608-10577627 | None:intergenic | 30.0% | |
| TTCAAAAGGAATGTAACACT+CGG | + | chr8_3:10577648-10577667 | None:intergenic | 30.0% | |
| GCATTAGGATCAATTTCAAA+AGG | + | chr8_3:10577662-10577681 | None:intergenic | 30.0% | |
| AAAGTTAGTTGTCTGAAAGA+TGG | - | chr8_3:10577695-10577714 | Msa1276110:intron | 30.0% | |
| AAAACAAGATTCAATCCTTC+AGG | - | chr8_3:10577794-10577813 | Msa1276110:CDS | 30.0% | |
| AAACAAGATTCAATCCTTCA+GGG | - | chr8_3:10577795-10577814 | Msa1276110:CDS | 30.0% | |
| ! | CATTGATTGAAGATGTTATG+AGG | - | chr8_3:10577921-10577940 | Msa1276110:CDS | 30.0% |
| CAAAGGTAACTTGATTCTAT+CGG | + | chr8_3:10578014-10578033 | None:intergenic | 30.0% | |
| ! | TGTGTCTATTTCTTTCTTAC+CGG | - | chr8_3:10578123-10578142 | Msa1276110:CDS | 30.0% |
| ! | GCGATTTGCGATTTGAAATT+AGG | + | chr8_3:10572444-10572463 | None:intergenic | 35.0% |
| CTTTGATCCGAAGAAGAAAA+GGG | - | chr8_3:10572694-10572713 | Msa1276110:three_prime_UTR | 35.0% | |
| !! | TTAAGAAGAAGAGTACTAGG+TGG | - | chr8_3:10572850-10572869 | Msa1276110:CDS | 35.0% |
| GTTGCATTTGTACTTTATGG+TGG | - | chr8_3:10572904-10572923 | Msa1276110:CDS | 35.0% | |
| TTCTTCAATTTCAAACCAGG+TGG | + | chr8_3:10573011-10573030 | None:intergenic | 35.0% | |
| ATTGTTTAGGAAGAGGTTGT+GGG | - | chr8_3:10573124-10573143 | Msa1276110:CDS | 35.0% | |
| !! | TTTGATTTGATGATGGTTGG+TGG | - | chr8_3:10573401-10573420 | Msa1276110:intron | 35.0% |
| !! | TTGATTTGATGATGGTTGGT+GGG | - | chr8_3:10573402-10573421 | Msa1276110:intron | 35.0% |
| TCGATTTAATGCTAGGTTGT+TGG | - | chr8_3:10573445-10573464 | Msa1276110:intron | 35.0% | |
| GGAGACACTAGTAAATGATT+TGG | - | chr8_3:10573495-10573514 | Msa1276110:intron | 35.0% | |
| ! | TATGGTATTGTTGCTTGAGA+TGG | - | chr8_3:10573534-10573553 | Msa1276110:intron | 35.0% |
| GATGGTTAATTCTTGCTCTT+TGG | - | chr8_3:10573552-10573571 | Msa1276110:intron | 35.0% | |
| ATAACTTTGCTTGGTTGTGT+TGG | - | chr8_3:10573726-10573745 | Msa1276110:intron | 35.0% | |
| ATTATGATGAGGATGGTGAT+TGG | - | chr8_3:10573848-10573867 | Msa1276110:intron | 35.0% | |
| !! | ACACTTGTCGATTTAATGCT+AGG | - | chr8_3:10573947-10573966 | Msa1276110:intron | 35.0% |
| TCGATTTAATGCTAGGTTGT+TGG | - | chr8_3:10573445-10573464 | Msa1276110:intron | 35.0% | |
| TTATTGGTGAAGACATTGGA+AGG | - | chr8_3:10573996-10574015 | Msa1276110:intron | 35.0% | |
| AAGACATTGGAAGGATGATT+TGG | - | chr8_3:10574005-10574024 | Msa1276110:intron | 35.0% | |
| ! | ATTGGAAGGATGATTTGGAA+GGG | - | chr8_3:10574010-10574029 | Msa1276110:intron | 35.0% |
| GATAATGTGATTGCTTGTGA+TGG | - | chr8_3:10574060-10574079 | Msa1276110:intron | 35.0% | |
| !! | ATTTTTGCTTTCTGCTGACT+TGG | - | chr8_3:10574086-10574105 | Msa1276110:intron | 35.0% |
| ACAGTGATCTAACATTACAC+AGG | + | chr8_3:10574178-10574197 | None:intergenic | 35.0% | |
| ! | ACAGTGTTATAAGCCTTATC+TGG | + | chr8_3:10574503-10574522 | None:intergenic | 35.0% |
| GACAAATATTGCACTAGTGA+TGG | + | chr8_3:10574529-10574548 | None:intergenic | 35.0% | |
| ACCATTTCTACGTCTATGAT+GGG | + | chr8_3:10574579-10574598 | None:intergenic | 35.0% | |
| TACCATTTCTACGTCTATGA+TGG | + | chr8_3:10574580-10574599 | None:intergenic | 35.0% | |
| GGTCTGTAACACACAAAAAT+AGG | + | chr8_3:10574618-10574637 | None:intergenic | 35.0% | |
| TAACTTAATTGATCAGGTGC+GGG | - | chr8_3:10574937-10574956 | Msa1276110:intron | 35.0% | |
| ! | TTCCACTAATGGTGGAAATA+AGG | - | chr8_3:10575003-10575022 | Msa1276110:CDS | 35.0% |
| GGTTATTATTCCACATTCGA+TGG | - | chr8_3:10575027-10575046 | Msa1276110:CDS | 35.0% | |
| TATTATTCCACATTCGATGG+GGG | - | chr8_3:10575030-10575049 | Msa1276110:CDS | 35.0% | |
| !!! | ACCATTTTTAGGTGTTCCAA+AGG | - | chr8_3:10575165-10575184 | Msa1276110:CDS | 35.0% |
| ATGTAACCTAGTAACTAGCA+TGG | + | chr8_3:10575257-10575276 | None:intergenic | 35.0% | |
| ! | AGGTTACATGATGACTTGTA+TGG | - | chr8_3:10575268-10575287 | Msa1276110:intron | 35.0% |
| ! | GGTTACATGATGACTTGTAT+GGG | - | chr8_3:10575269-10575288 | Msa1276110:intron | 35.0% |
| GAGTATAATACTGTTGAACC+AGG | + | chr8_3:10575300-10575319 | None:intergenic | 35.0% | |
| AAGATCTCTCTCCTTTGAAT+TGG | - | chr8_3:10575509-10575528 | Msa1276110:intron | 35.0% | |
| !! | AATTTGGTTCTTTCGTCACA+AGG | - | chr8_3:10575607-10575626 | Msa1276110:intron | 35.0% |
| !! | ATTTGGTTCTTTCGTCACAA+GGG | - | chr8_3:10575608-10575627 | Msa1276110:intron | 35.0% |
| CATGTTGCAATGTTTGAATG+CGG | + | chr8_3:10575668-10575687 | None:intergenic | 35.0% | |
| !! | GATCGATATTGTTGACTTTC+GGG | - | chr8_3:10575917-10575936 | Msa1276110:intron | 35.0% |
| ATGAGACAGAACAAGAAAAC+TGG | + | chr8_3:10576248-10576267 | None:intergenic | 35.0% | |
| ! | ACACTCAGGTTTTTGTTAAC+AGG | - | chr8_3:10576277-10576296 | Msa1276110:intron | 35.0% |
| ! | CACTCAGGTTTTTGTTAACA+GGG | - | chr8_3:10576278-10576297 | Msa1276110:intron | 35.0% |
| !! | CAAGAGGTATTTGCAACATT+GGG | + | chr8_3:10576317-10576336 | None:intergenic | 35.0% |
| !! | ACAAGAGGTATTTGCAACAT+TGG | + | chr8_3:10576318-10576337 | None:intergenic | 35.0% |
| TGGACTGAATACCATGATAT+GGG | - | chr8_3:10576347-10576366 | Msa1276110:intron | 35.0% | |
| GAACATAAAGTTTACACAGC+TGG | - | chr8_3:10576395-10576414 | Msa1276110:intron | 35.0% | |
| ! | GTTTGTTGCTCCTAAAATGA+TGG | - | chr8_3:10576439-10576458 | Msa1276110:intron | 35.0% |
| GGTAGTGATCATTTCTCTTA+TGG | - | chr8_3:10576467-10576486 | Msa1276110:intron | 35.0% | |
| CAAATATTGGTCAAACCCAT+TGG | - | chr8_3:10576529-10576548 | Msa1276110:intron | 35.0% | |
| AATCTCACTTTGTCTCCAAT+GGG | + | chr8_3:10576547-10576566 | None:intergenic | 35.0% | |
| AAATCTCACTTTGTCTCCAA+TGG | + | chr8_3:10576548-10576567 | None:intergenic | 35.0% | |
| TTTCTGAATGAATTCTTCGG+TGG | - | chr8_3:10576628-10576647 | Msa1276110:intron | 35.0% | |
| GATACTTATAGGCTCTGTTT+AGG | - | chr8_3:10576723-10576742 | Msa1276110:intron | 35.0% | |
| ATACTAGTATAAGCGCTTGT+GGG | + | chr8_3:10576939-10576958 | None:intergenic | 35.0% | |
| AATACTAGTATAAGCGCTTG+TGG | + | chr8_3:10576940-10576959 | None:intergenic | 35.0% | |
| AACAACTTCAGATATGGTGT+TGG | - | chr8_3:10577165-10577184 | Msa1276110:intron | 35.0% | |
| GGTGTATCTAATACTGTGTT+TGG | + | chr8_3:10577238-10577257 | None:intergenic | 35.0% | |
| AGAGAAGATTTCCATATCAG+GGG | + | chr8_3:10577567-10577586 | None:intergenic | 35.0% | |
| GAGAGAAGATTTCCATATCA+GGG | + | chr8_3:10577568-10577587 | None:intergenic | 35.0% | |
| AGAGAGAAGATTTCCATATC+AGG | + | chr8_3:10577569-10577588 | None:intergenic | 35.0% | |
| ATCTTCTCTCTATATGGAGT+TGG | - | chr8_3:10577578-10577597 | Msa1276110:intron | 35.0% | |
| CATATTCTCGAACATAAGTG+CGG | + | chr8_3:10577823-10577842 | None:intergenic | 35.0% | |
| GGTGCTCATGTTGATATAAT+GGG | - | chr8_3:10577890-10577909 | Msa1276110:CDS | 35.0% | |
| AGAATCAAGTTACCTTTGTG+AGG | - | chr8_3:10578016-10578035 | Msa1276110:CDS | 35.0% | |
| GAATCAAGTTACCTTTGTGA+GGG | - | chr8_3:10578017-10578036 | Msa1276110:CDS | 35.0% | |
| AATCAAGTTACCTTTGTGAG+GGG | - | chr8_3:10578018-10578037 | Msa1276110:CDS | 35.0% | |
| ! | CCTTTAGAGAAATGAAAGAG+TGG | + | chr8_3:10578198-10578217 | None:intergenic | 35.0% |
| CCACTCTTTCATTTCTCTAA+AGG | - | chr8_3:10578195-10578214 | Msa1276110:five_prime_UTR | 35.0% | |
| GAAATTCTGAGTGCATCTTA+TGG | + | chr8_3:10578276-10578295 | None:intergenic | 35.0% | |
| TAAGATGCACTCAGAATTTC+TGG | - | chr8_3:10578276-10578295 | Msa1276110:five_prime_UTR | 35.0% | |
| CATATTTGTCAGATGCTTCA+TGG | - | chr8_3:10578394-10578413 | Msa1276110:intron | 35.0% | |
| TTTGTGAAGGTAGTGAGAGA+AGG | + | chr8_3:10572328-10572347 | None:intergenic | 40.0% | |
| AATATTAGCATCGCACAGAG+AGG | + | chr8_3:10572379-10572398 | None:intergenic | 40.0% | |
| GCTTTGATCCGAAGAAGAAA+AGG | - | chr8_3:10572693-10572712 | Msa1276110:three_prime_UTR | 40.0% | |
| ! | GTTCTGACCCTTTTCTTCTT+CGG | + | chr8_3:10572704-10572723 | None:intergenic | 40.0% |
| AAAAGGGTCAGAACCAGAAA+AGG | - | chr8_3:10572710-10572729 | Msa1276110:three_prime_UTR | 40.0% | |
| AAAGGGTCAGAACCAGAAAA+GGG | - | chr8_3:10572711-10572730 | Msa1276110:three_prime_UTR | 40.0% | |
| ! | TTTTCGCTACTACCCTTTTC+TGG | + | chr8_3:10572726-10572745 | None:intergenic | 40.0% |
| ! | CTTGTGTTGACAGTTGTTGT+TGG | - | chr8_3:10572874-10572893 | Msa1276110:CDS | 40.0% |
| !! | GACAGTTGTTGTTGGTTTGT+TGG | - | chr8_3:10572882-10572901 | Msa1276110:CDS | 40.0% |
| ACATACTGAGGAAATGAAGC+TGG | + | chr8_3:10572957-10572976 | None:intergenic | 40.0% | |
| ATTTCCTCAGTATGTCACTG+AGG | - | chr8_3:10572962-10572981 | Msa1276110:CDS | 40.0% | |
| TATGTCACTGAGGCTATAAC+TGG | - | chr8_3:10572972-10572991 | Msa1276110:CDS | 40.0% | |
| AATTTCAAACCAGGTGGATC+AGG | + | chr8_3:10573005-10573024 | None:intergenic | 40.0% | |
| AGTGTGCTGAAGGATTGTTT+AGG | - | chr8_3:10573111-10573130 | Msa1276110:CDS | 40.0% | |
| CTGAAGGATTGTTTAGGAAG+AGG | - | chr8_3:10573117-10573136 | Msa1276110:CDS | 40.0% | |
| GATTGTTTAGGAAGAGGTTG+TGG | - | chr8_3:10573123-10573142 | Msa1276110:CDS | 40.0% | |
| TTGTTTAGGAAGAGGTTGTG+GGG | - | chr8_3:10573125-10573144 | Msa1276110:CDS | 40.0% | |
| ! | ATTCTTGCTCTTTGGAGACT+TGG | - | chr8_3:10573560-10573579 | Msa1276110:intron | 40.0% |
| !! | TTATTGGTTGGTGAGCTGTT+TGG | - | chr8_3:10573923-10573942 | Msa1276110:intron | 40.0% |
| ! | CATTGGAAGGATGATTTGGA+AGG | - | chr8_3:10574009-10574028 | Msa1276110:intron | 40.0% |
| ! | GAACTCCTCTTTTGTGGTAT+TGG | - | chr8_3:10574032-10574051 | Msa1276110:intron | 40.0% |
| AAGCACCAATACCACAAAAG+AGG | + | chr8_3:10574040-10574059 | None:intergenic | 40.0% | |
| TTTCCATGTCCATTTGTGAG+TGG | - | chr8_3:10574340-10574359 | Msa1276110:CDS | 40.0% | |
| ACAGTACTTCCACTCACAAA+TGG | + | chr8_3:10574352-10574371 | None:intergenic | 40.0% | |
| CCTTATCTGGACAATCAGTT+AGG | + | chr8_3:10574490-10574509 | None:intergenic | 40.0% | |
| CCTAACTGATTGTCCAGATA+AGG | - | chr8_3:10574487-10574506 | Msa1276110:CDS | 40.0% | |
| TCCCATCATAGACGTAGAAA+TGG | - | chr8_3:10574575-10574594 | Msa1276110:intron | 40.0% | |
| CATTCCTGTTTCATTGTCGA+GGG | + | chr8_3:10574664-10574683 | None:intergenic | 40.0% | |
| TGTACATGGCTGCATATGAT+TGG | - | chr8_3:10574811-10574830 | Msa1276110:intron | 40.0% | |
| GAACTCATGGTTTCCACTAA+TGG | - | chr8_3:10574992-10575011 | Msa1276110:CDS | 40.0% | |
| ! | CACTAATGGTGGAAATAAGG+CGG | - | chr8_3:10575006-10575025 | Msa1276110:CDS | 40.0% |
| TATAAAACCCCCATCGAATG+TGG | + | chr8_3:10575040-10575059 | None:intergenic | 40.0% | |
| AAGGCAATTGTAAACATCGG+TGG | - | chr8_3:10575142-10575161 | Msa1276110:CDS | 40.0% | |
| !! | AACATCGGTGGACCATTTTT+AGG | - | chr8_3:10575154-10575173 | Msa1276110:CDS | 40.0% |
| !! | GCCTTTGGAACACCTAAAAA+TGG | + | chr8_3:10575169-10575188 | None:intergenic | 40.0% |
| TTATGGCCATGCTAGTTACT+AGG | - | chr8_3:10575248-10575267 | Msa1276110:intron | 40.0% | |
| !! | AAACTATGAAGCACTGACAC+TGG | - | chr8_3:10575374-10575393 | Msa1276110:intron | 40.0% |
| TTATGAAGATGACTCGCACT+TGG | - | chr8_3:10575688-10575707 | Msa1276110:CDS | 40.0% | |
| TATGAAGATGACTCGCACTT+GGG | - | chr8_3:10575689-10575708 | Msa1276110:CDS | 40.0% | |
| ATGTCAATGATACCAAAGGG+AGG | - | chr8_3:10575720-10575739 | Msa1276110:CDS | 40.0% | |
| TGTCAATGATACCAAAGGGA+GGG | - | chr8_3:10575721-10575740 | Msa1276110:CDS | 40.0% | |
| AGTCTCACAAGTGCTTATAC+CGG | + | chr8_3:10576002-10576021 | None:intergenic | 40.0% | |
| AAGCTATCATGAAGAGCTTG+TGG | + | chr8_3:10576049-10576068 | None:intergenic | 40.0% | |
| TAAGCACACAAGACAATGCA+GGG | + | chr8_3:10576213-10576232 | None:intergenic | 40.0% | |
| ATAAGCACACAAGACAATGC+AGG | + | chr8_3:10576214-10576233 | None:intergenic | 40.0% | |
| CTCATTTGTACTTGACACTC+AGG | - | chr8_3:10576263-10576282 | Msa1276110:intron | 40.0% | |
| ! | GTGGACTGAATACCATGATA+TGG | - | chr8_3:10576346-10576365 | Msa1276110:intron | 40.0% |
| CATTCGTCGACGATACTTAT+AGG | - | chr8_3:10576712-10576731 | Msa1276110:intron | 40.0% | |
| AAGCTATACTGGAGAGCTTA+TGG | - | chr8_3:10576874-10576893 | Msa1276110:intron | 40.0% | |
| GGATTGTGTGAGATAGCTTA+TGG | + | chr8_3:10576918-10576937 | None:intergenic | 40.0% | |
| !! | CTTTGGATTGGCGTTGAAAA+AGG | - | chr8_3:10576994-10577013 | Msa1276110:intron | 40.0% |
| ! | TTATTTTCTCTCACCTCGGA+TGG | - | chr8_3:10577115-10577134 | Msa1276110:intron | 40.0% |
| GCTAGTAAATATTCCATCCG+AGG | + | chr8_3:10577131-10577150 | None:intergenic | 40.0% | |
| TTGGAAAGATGATGACCTGA+GGG | + | chr8_3:10577443-10577462 | None:intergenic | 40.0% | |
| !! | ATTTCCATATCAGGGGCATT+TGG | + | chr8_3:10577560-10577579 | None:intergenic | 40.0% |
| TATAAGCTCTTTCGGTTGGT+AGG | + | chr8_3:10577604-10577623 | None:intergenic | 40.0% | |
| GAAATTGATCCTAATGCCGA+TGG | - | chr8_3:10577665-10577684 | Msa1276110:intron | 40.0% | |
| ACTAACTTTGTCACCACCAT+CGG | + | chr8_3:10577684-10577703 | None:intergenic | 40.0% | |
| ATGTAGCCTGAACTTAGAAC+TGG | + | chr8_3:10577752-10577771 | None:intergenic | 40.0% | |
| CGGTGCTCATGTTGATATAA+TGG | - | chr8_3:10577889-10577908 | Msa1276110:CDS | 40.0% | |
| AGAAGAATTGGGAGGTGATA+AGG | - | chr8_3:10577964-10577983 | Msa1276110:CDS | 40.0% | |
| !!! | TTTTGGAACCATCCAGTAAC+GGG | + | chr8_3:10578056-10578075 | None:intergenic | 40.0% |
| !!! | CTTTTGGAACCATCCAGTAA+CGG | + | chr8_3:10578057-10578076 | None:intergenic | 40.0% |
| ATTCTGCTTTACTCGCAAAG+GGG | + | chr8_3:10578169-10578188 | None:intergenic | 40.0% | |
| CATTCTGCTTTACTCGCAAA+GGG | + | chr8_3:10578170-10578189 | None:intergenic | 40.0% | |
| CAAATTCAGATTCCAGTGAG+TGG | - | chr8_3:10578309-10578328 | Msa1276110:intron | 40.0% | |
| ACAGAGAGGAACGATGAGAA+GGG | + | chr8_3:10572365-10572384 | None:intergenic | 45.0% | |
| TCTTCTTCGGATCAAAGCCA+TGG | + | chr8_3:10572691-10572710 | None:intergenic | 45.0% | |
| ATAGCCTCAGTGACATACTG+AGG | + | chr8_3:10572969-10572988 | None:intergenic | 45.0% | |
| ! | GTTAAGTGTGAAGCATCCAG+TGG | - | chr8_3:10573037-10573056 | Msa1276110:CDS | 45.0% |
| ! | CATCCAGTGGTTTTTGTTCC+CGG | - | chr8_3:10573050-10573069 | Msa1276110:CDS | 45.0% |
| ! | ATCCAGTGGTTTTTGTTCCC+GGG | - | chr8_3:10573051-10573070 | Msa1276110:CDS | 45.0% |
| TTTGTTCCCGGGATTGTTAC+CGG | - | chr8_3:10573062-10573081 | Msa1276110:CDS | 45.0% | |
| ! | TTACCGGTGGACTTGAACTT+TGG | - | chr8_3:10573078-10573097 | Msa1276110:CDS | 45.0% |
| ! | TACCGGTGGACTTGAACTTT+GGG | - | chr8_3:10573079-10573098 | Msa1276110:CDS | 45.0% |
| CTTCCACTCACAAATGGACA+TGG | + | chr8_3:10574346-10574365 | None:intergenic | 45.0% | |
| TGTGTTACAGACCTTCATGC+TGG | - | chr8_3:10574625-10574644 | Msa1276110:intron | 45.0% | |
| GTGTTACAGACCTTCATGCT+GGG | - | chr8_3:10574626-10574645 | Msa1276110:intron | 45.0% | |
| ATGTCCCTCGACAATGAAAC+AGG | - | chr8_3:10574657-10574676 | Msa1276110:intron | 45.0% | |
| CCATTCCTGTTTCATTGTCG+AGG | + | chr8_3:10574665-10574684 | None:intergenic | 45.0% | |
| CCTCGACAATGAAACAGGAA+TGG | - | chr8_3:10574662-10574681 | Msa1276110:intron | 45.0% | |
| TTGCCGCAGGATACTTTGTT+TGG | - | chr8_3:10574739-10574758 | Msa1276110:intron | 45.0% | |
| ! | TGCCGCAGGATACTTTGTTT+GGG | - | chr8_3:10574740-10574759 | Msa1276110:intron | 45.0% |
| TGCGTGCCAAGTTAGCAATT+AGG | + | chr8_3:10574770-10574789 | None:intergenic | 45.0% | |
| ATTGCTAACTTGGCACGCAT+CGG | - | chr8_3:10574771-10574790 | Msa1276110:intron | 45.0% | |
| TGCGGGATCAAACACTAAGT+CGG | - | chr8_3:10574954-10574973 | Msa1276110:intron | 45.0% | |
| CTCATGGTTTCCACTAATGG+TGG | - | chr8_3:10574995-10575014 | Msa1276110:CDS | 45.0% | |
| !! | CGCCTTATTTCCACCATTAG+TGG | + | chr8_3:10575008-10575027 | None:intergenic | 45.0% |
| GTGTTCCAAAGGCTATAGCA+GGG | - | chr8_3:10575176-10575195 | Msa1276110:CDS | 45.0% | |
| AAAAGCCCTGCTATAGCCTT+TGG | + | chr8_3:10575184-10575203 | None:intergenic | 45.0% | |
| ACCTTGCAACAGCAATGTCT+CGG | + | chr8_3:10575219-10575238 | None:intergenic | 45.0% | |
| GTGTTTGACACTGACACAAG+CGG | + | chr8_3:10575419-10575438 | None:intergenic | 45.0% | |
| CTTGTGTCAGTGTCAAACAC+CGG | - | chr8_3:10575419-10575438 | Msa1276110:intron | 45.0% | |
| GTCAATGATACCAAAGGGAG+GGG | - | chr8_3:10575722-10575741 | Msa1276110:CDS | 45.0% | |
| TTTCCTCTGGTGACCAATCA+AGG | + | chr8_3:10575764-10575783 | None:intergenic | 45.0% | |
| TGCTTTGCTTTCTCGTGTGA+AGG | + | chr8_3:10575794-10575813 | None:intergenic | 45.0% | |
| ATACCTCTTGTCGTGATGTG+TGG | - | chr8_3:10576327-10576346 | Msa1276110:intron | 45.0% | |
| ATACCATGATATGGGAGTCG+AGG | - | chr8_3:10576355-10576374 | Msa1276110:intron | 45.0% | |
| TACCATGATATGGGAGTCGA+GGG | - | chr8_3:10576356-10576375 | Msa1276110:intron | 45.0% | |
| TAGGAGCAACAAACTGAAGC+AGG | + | chr8_3:10576433-10576452 | None:intergenic | 45.0% | |
| CTTGGAAAGATGATGACCTG+AGG | + | chr8_3:10577444-10577463 | None:intergenic | 45.0% | |
| GTTACCAAATGCCCCTGATA+TGG | - | chr8_3:10577553-10577572 | Msa1276110:intron | 45.0% | |
| GGAATGTAACACTCGGCAAA+GGG | + | chr8_3:10577641-10577660 | None:intergenic | 45.0% | |
| AGGAATGTAACACTCGGCAA+AGG | + | chr8_3:10577642-10577661 | None:intergenic | 45.0% | |
| ATTGATCCTAATGCCGATGG+TGG | - | chr8_3:10577668-10577687 | Msa1276110:intron | 45.0% | |
| GATGGTGTCTACACTGTTGA+TGG | - | chr8_3:10577713-10577732 | Msa1276110:CDS | 45.0% | |
| !! | ACCGTTCCAGTTCTAAGTTC+AGG | - | chr8_3:10577743-10577762 | Msa1276110:CDS | 45.0% |
| GCCTGAACTTAGAACTGGAA+CGG | + | chr8_3:10577747-10577766 | None:intergenic | 45.0% | |
| TCAGGCTACATGTGTGCTAA+AGG | - | chr8_3:10577761-10577780 | Msa1276110:CDS | 45.0% | |
| GCTACATGTGTGCTAAAGGT+TGG | - | chr8_3:10577765-10577784 | Msa1276110:CDS | 45.0% | |
| GAAGGTAGAGGAACACAAAG+CGG | - | chr8_3:10577869-10577888 | Msa1276110:CDS | 45.0% | |
| AGGAGCCAAAGGAGAAGAAT+TGG | - | chr8_3:10577952-10577971 | Msa1276110:CDS | 45.0% | |
| GGAGCCAAAGGAGAAGAATT+GGG | - | chr8_3:10577953-10577972 | Msa1276110:CDS | 45.0% | |
| ACCTCCCAATTCTTCTCCTT+TGG | + | chr8_3:10577960-10577979 | None:intergenic | 45.0% | |
| AAGTTACCTTTGTGAGGGGT+TGG | - | chr8_3:10578022-10578041 | Msa1276110:CDS | 45.0% | |
| CGTTACTGGATGGTTCCAAA+AGG | - | chr8_3:10578055-10578074 | Msa1276110:CDS | 45.0% | |
| TTCTTACCGGTACTATCGAG+AGG | - | chr8_3:10578136-10578155 | Msa1276110:CDS | 45.0% | |
| GCATTCTGCTTTACTCGCAA+AGG | + | chr8_3:10578171-10578190 | None:intergenic | 45.0% | |
| CACAGAGAGGAACGATGAGA+AGG | + | chr8_3:10572366-10572385 | None:intergenic | 50.0% | |
| AAACCAGGTGGATCAGGCAT+AGG | + | chr8_3:10572999-10573018 | None:intergenic | 50.0% | |
| ATCCCGGGAACAAAAACCAC+TGG | + | chr8_3:10573056-10573075 | None:intergenic | 50.0% | |
| AAGTCCACCGGTAACAATCC+CGG | + | chr8_3:10573072-10573091 | None:intergenic | 50.0% | |
| CTCCCAAAGTTCAAGTCCAC+CGG | + | chr8_3:10573084-10573103 | None:intergenic | 50.0% | |
| ! | GGTGGACTTGAACTTTGGGA+GGG | - | chr8_3:10573083-10573102 | Msa1276110:CDS | 50.0% |
| ! | GTGGACTTGAACTTTGGGAG+GGG | - | chr8_3:10573084-10573103 | Msa1276110:CDS | 50.0% |
| TTTAGGAAGAGGTTGTGGGG+TGG | - | chr8_3:10573128-10573147 | Msa1276110:CDS | 50.0% | |
| ! | AGGTTGTGGGGTGGTACTTT+TGG | - | chr8_3:10573137-10573156 | Msa1276110:CDS | 50.0% |
| ! | GGAAGGGAACTCCTCTTTTG+TGG | - | chr8_3:10574026-10574045 | Msa1276110:intron | 50.0% |
| TTACAGACCTTCATGCTGGG+TGG | - | chr8_3:10574629-10574648 | Msa1276110:intron | 50.0% | |
| GAAACAGGAATGGATCCACC+TGG | - | chr8_3:10574672-10574691 | Msa1276110:intron | 50.0% | |
| ATCCACCTGGCATTAGAGTC+CGG | - | chr8_3:10574685-10574704 | Msa1276110:intron | 50.0% | |
| ! | CGCCCAAACAAAGTATCCTG+CGG | + | chr8_3:10574745-10574764 | None:intergenic | 50.0% |
| ! | CGCAGGATACTTTGTTTGGG+CGG | - | chr8_3:10574743-10574762 | Msa1276110:intron | 50.0% |
| GGCGGTCCTAATTGCTAACT+TGG | - | chr8_3:10574761-10574780 | Msa1276110:intron | 50.0% | |
| ! | GTTGAAGCACCAGCTCCAAT+GGG | - | chr8_3:10575082-10575101 | Msa1276110:CDS | 50.0% |
| GGTGTTCCAAAGGCTATAGC+AGG | - | chr8_3:10575175-10575194 | Msa1276110:CDS | 50.0% | |
| CCTTGCAACAGCAATGTCTC+GGG | + | chr8_3:10575218-10575237 | None:intergenic | 50.0% | |
| ! | TGACTTGTATGGGTGTAGCC+TGG | - | chr8_3:10575279-10575298 | Msa1276110:intron | 50.0% |
| ACGCCTTCAACCTGAAGTGT+CGG | - | chr8_3:10575443-10575462 | Msa1276110:intron | 50.0% | |
| AAAGGGAGGGGACACCATAT+GGG | - | chr8_3:10575734-10575753 | Msa1276110:CDS | 50.0% | |
| AGTCCACACATCACGACAAG+AGG | + | chr8_3:10576333-10576352 | None:intergenic | 50.0% | |
| ! | CTACCACGCGCCATCATTTT+AGG | + | chr8_3:10576452-10576471 | None:intergenic | 50.0% |
| AGTTGAGTACTTGAGCCCTC+AGG | - | chr8_3:10577425-10577444 | Msa1276110:intron | 50.0% | |
| TTGTCACCACCATCGGCATT+AGG | + | chr8_3:10577677-10577696 | None:intergenic | 50.0% | |
| ATGTGTGCTAAAGGTTGGCG+CGG | - | chr8_3:10577770-10577789 | Msa1276110:CDS | 50.0% | |
| ACATAAGTGCGGATCCCTGA+AGG | + | chr8_3:10577812-10577831 | None:intergenic | 50.0% | |
| TCCTCTACCTTCTAGCAGGT+TGG | + | chr8_3:10577861-10577880 | None:intergenic | 50.0% | |
| GTGTTCCTCTACCTTCTAGC+AGG | + | chr8_3:10577865-10577884 | None:intergenic | 50.0% | |
| GATGTTATGAGGGTTGCAGC+AGG | - | chr8_3:10577932-10577951 | Msa1276110:CDS | 50.0% | |
| GCCAAAGGAGAAGAATTGGG+AGG | - | chr8_3:10577956-10577975 | Msa1276110:CDS | 50.0% | |
| AGGAATCCAACCCCTCACAA+AGG | + | chr8_3:10578031-10578050 | None:intergenic | 50.0% | |
| TTGGATTCCTCTCCCGTTAC+TGG | - | chr8_3:10578041-10578060 | Msa1276110:CDS | 50.0% | |
| ATTCCTCTCCCGTTACTGGA+TGG | - | chr8_3:10578045-10578064 | Msa1276110:CDS | 50.0% | |
| GGATGGTTCCAAAAGGAGAG+AGG | - | chr8_3:10578062-10578081 | Msa1276110:CDS | 50.0% | |
| ! | TGCGTCTTCCTCTCTCCTTT+TGG | + | chr8_3:10578073-10578092 | None:intergenic | 50.0% |
| GTGGATCCTCTCGATAGTAC+CGG | + | chr8_3:10578145-10578164 | None:intergenic | 50.0% | |
| ATTCCAGTGAGTGGCGAAAC+AGG | - | chr8_3:10578318-10578337 | Msa1276110:intron | 50.0% | |
| AGTCCACCGGTAACAATCCC+GGG | + | chr8_3:10573071-10573090 | None:intergenic | 55.0% | |
| ! | CGGTGGACTTGAACTTTGGG+AGG | - | chr8_3:10573082-10573101 | Msa1276110:CDS | 55.0% |
| ATGTGCTCCACCCAGCATGA+AGG | + | chr8_3:10574639-10574658 | None:intergenic | 55.0% | |
| ATTAGAGTCCGGCCTGTCTC+AGG | - | chr8_3:10574696-10574715 | Msa1276110:intron | 55.0% | |
| CTACAAGTCCTGAGACAGGC+CGG | + | chr8_3:10574707-10574726 | None:intergenic | 55.0% | |
| GCAGCTACAAGTCCTGAGAC+AGG | + | chr8_3:10574711-10574730 | None:intergenic | 55.0% | |
| ! | GGTTGAAGCACCAGCTCCAA+TGG | - | chr8_3:10575081-10575100 | Msa1276110:CDS | 55.0% |
| ! | CCCGAGACATTGCTGTTGCA+AGG | - | chr8_3:10575215-10575234 | Msa1276110:CDS | 55.0% |
| !! | ACTTCAGGTTGAAGGCGTGC+CGG | + | chr8_3:10575441-10575460 | None:intergenic | 55.0% |
| !! | GCACCGACACTTCAGGTTGA+AGG | + | chr8_3:10575449-10575468 | None:intergenic | 55.0% |
| !! | CTATGCAGCACCGACACTTC+AGG | + | chr8_3:10575456-10575475 | None:intergenic | 55.0% |
| TCACAAGGGCGATTGCACCA+GGG | - | chr8_3:10575622-10575641 | Msa1276110:intron | 55.0% | |
| CATATGGTGTCCCCTCCCTT+TGG | + | chr8_3:10575735-10575754 | None:intergenic | 55.0% | |
| CAAAGGGAGGGGACACCATA+TGG | - | chr8_3:10575733-10575752 | Msa1276110:CDS | 55.0% | |
| AAGGGAGGGGACACCATATG+GGG | - | chr8_3:10575735-10575754 | Msa1276110:CDS | 55.0% | |
| TGGTCACCAGAGGAAAGCTG+TGG | - | chr8_3:10575768-10575787 | Msa1276110:CDS | 55.0% | |
| TGAAGGCCACAGCTTTCCTC+TGG | + | chr8_3:10575777-10575796 | None:intergenic | 55.0% | |
| GTTTGGCAAAGCTGTCGCAG+AGG | - | chr8_3:10575881-10575900 | Msa1276110:CDS | 55.0% | |
| AAGACAATGCAGGGCCCTGT+TGG | + | chr8_3:10576204-10576223 | None:intergenic | 55.0% | |
| CTCCCTCGACTCCCATATCA+TGG | + | chr8_3:10576361-10576380 | None:intergenic | 55.0% | |
| ! | GCTCCTAAAATGATGGCGCG+TGG | - | chr8_3:10576446-10576465 | Msa1276110:intron | 55.0% |
| ! | CTACCTTCTAGCAGGTTGGC+TGG | + | chr8_3:10577857-10577876 | None:intergenic | 55.0% |
| GCCAACCTGCTAGAAGGTAG+AGG | - | chr8_3:10577857-10577876 | Msa1276110:CDS | 55.0% | |
| ! | GAACCATCCAGTAACGGGAG+AGG | + | chr8_3:10578051-10578070 | None:intergenic | 55.0% |
| GCTTTACTCGCAAAGGGGTG+TGG | + | chr8_3:10578164-10578183 | None:intergenic | 55.0% | |
| CTTCCTGTTTCGCCACTCAC+TGG | + | chr8_3:10578324-10578343 | None:intergenic | 55.0% | |
| GAGTGGCGAAACAGGAAGCA+AGG | - | chr8_3:10578326-10578345 | Msa1276110:intron | 55.0% | |
| GGTCCTATGCCTGATCCACC+TGG | - | chr8_3:10572993-10573012 | Msa1276110:CDS | 60.0% | |
| GTTCCCGGGATTGTTACCGG+TGG | - | chr8_3:10573065-10573084 | Msa1276110:CDS | 60.0% | |
| !! | GAGGGGCATCAGTGTGCTGA+AGG | - | chr8_3:10573101-10573120 | Msa1276110:CDS | 60.0% |
| ACAGGCCGGACTCTAATGCC+AGG | + | chr8_3:10574693-10574712 | None:intergenic | 60.0% | |
| ! | GCTGCTGACTACTTTGCCGC+AGG | - | chr8_3:10574726-10574745 | Msa1276110:intron | 60.0% |
| ! | GAAGCACCAGCTCCAATGGG+TGG | - | chr8_3:10575085-10575104 | Msa1276110:CDS | 60.0% |
| ! | GTGGTGGAGGAGGACCAGAT+TGG | - | chr8_3:10575104-10575123 | Msa1276110:CDS | 60.0% |
| GTCACAAGGGCGATTGCACC+AGG | - | chr8_3:10575621-10575640 | Msa1276110:intron | 60.0% | |
| CCAATCAAGGCCGCCCCATA+TGG | + | chr8_3:10575751-10575770 | None:intergenic | 60.0% | |
| CCATATGGGGCGGCCTTGAT+TGG | - | chr8_3:10575748-10575767 | Msa1276110:CDS | 60.0% | |
| ! | CGGCCTTGATTGGTCACCAG+AGG | - | chr8_3:10575758-10575777 | Msa1276110:CDS | 60.0% |
| ! | CCTTCTAGCAGGTTGGCTGG+AGG | + | chr8_3:10577854-10577873 | None:intergenic | 60.0% |
| CCTCCAGCCAACCTGCTAGA+AGG | - | chr8_3:10577851-10577870 | Msa1276110:CDS | 60.0% | |
| AGGGTTGCAGCAGGAGCCAA+AGG | - | chr8_3:10577941-10577960 | Msa1276110:CDS | 60.0% | |
| GGCCGGACTCTAATGCCAGG+TGG | + | chr8_3:10574690-10574709 | None:intergenic | 65.0% | |
| GCACCAGCTCCAATGGGTGG+TGG | - | chr8_3:10575088-10575107 | Msa1276110:CDS | 65.0% | |
| CCTCCACCACCCATTGGAGC+TGG | + | chr8_3:10575094-10575113 | None:intergenic | 65.0% | |
| ! | CCAGCTCCAATGGGTGGTGG+AGG | - | chr8_3:10575091-10575110 | Msa1276110:CDS | 65.0% |
| !! | GCTCCAATGGGTGGTGGAGG+AGG | - | chr8_3:10575094-10575113 | Msa1276110:CDS | 65.0% |
| GGTCCTCCTCCACCACCCAT+TGG | + | chr8_3:10575100-10575119 | None:intergenic | 65.0% | |
| GGAGGGGACACCATATGGGG+CGG | - | chr8_3:10575738-10575757 | Msa1276110:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 10572310 | 10578560 | 10572310 | ID=Msa1276110;Name=Msa1276110 |
| chr8_3 | mRNA | 10572310 | 10578560 | 10572310 | ID=Msa1276110-mRNA-1;Parent=Msa1276110;Name=Msa1276110-mRNA-1;_AED=0.07;_eAED=0.07;_QI=197|0.83|0.85|1|0.83|0.71|7|524|666 |
| chr8_3 | exon | 10572310 | 10573317 | 10572310 | ID=Msa1276110-mRNA-1:exon:4372;Parent=Msa1276110-mRNA-1 |
| chr8_3 | exon | 10574312 | 10574571 | 10574312 | ID=Msa1276110-mRNA-1:exon:4371;Parent=Msa1276110-mRNA-1 |
| chr8_3 | exon | 10574977 | 10575241 | 10574977 | ID=Msa1276110-mRNA-1:exon:4370;Parent=Msa1276110-mRNA-1 |
| chr8_3 | exon | 10575634 | 10575917 | 10575634 | ID=Msa1276110-mRNA-1:exon:4369;Parent=Msa1276110-mRNA-1 |
| chr8_3 | exon | 10576013 | 10576235 | 10576013 | ID=Msa1276110-mRNA-1:exon:4368;Parent=Msa1276110-mRNA-1 |
| chr8_3 | exon | 10577696 | 10578320 | 10577696 | ID=Msa1276110-mRNA-1:exon:4367;Parent=Msa1276110-mRNA-1 |
| chr8_3 | exon | 10578504 | 10578560 | 10578504 | ID=Msa1276110-mRNA-1:exon:4366;Parent=Msa1276110-mRNA-1 |
| chr8_3 | five_prime_UTR | 10578504 | 10578560 | 10578504 | ID=Msa1276110-mRNA-1:five_prime_utr;Parent=Msa1276110-mRNA-1 |
| chr8_3 | five_prime_UTR | 10578181 | 10578320 | 10578181 | ID=Msa1276110-mRNA-1:five_prime_utr;Parent=Msa1276110-mRNA-1 |
| chr8_3 | CDS | 10577696 | 10578180 | 10577696 | ID=Msa1276110-mRNA-1:cds;Parent=Msa1276110-mRNA-1 |
| chr8_3 | CDS | 10576013 | 10576235 | 10576013 | ID=Msa1276110-mRNA-1:cds;Parent=Msa1276110-mRNA-1 |
| chr8_3 | CDS | 10575634 | 10575917 | 10575634 | ID=Msa1276110-mRNA-1:cds;Parent=Msa1276110-mRNA-1 |
| chr8_3 | CDS | 10574977 | 10575241 | 10574977 | ID=Msa1276110-mRNA-1:cds;Parent=Msa1276110-mRNA-1 |
| chr8_3 | CDS | 10574312 | 10574571 | 10574312 | ID=Msa1276110-mRNA-1:cds;Parent=Msa1276110-mRNA-1 |
| chr8_3 | CDS | 10572834 | 10573317 | 10572834 | ID=Msa1276110-mRNA-1:cds;Parent=Msa1276110-mRNA-1 |
| chr8_3 | three_prime_UTR | 10572310 | 10572833 | 10572310 | ID=Msa1276110-mRNA-1:three_prime_utr;Parent=Msa1276110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
