AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0050500

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0050500 MtrunA17_Chr1g0149221 88.013 609 25 3 1 564 16 621 0.0 1088
Msa0050500 MtrunA17_Chr4g0073421 30.938 320 166 8 142 461 164 428 7.07e-39 149
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0050500 AT2G25530.1 63.320 518 168 3 50 546 138 654 0.0 683
Msa0050500 AT2G25530.2 61.042 403 135 3 50 431 138 539 4.10e-175 506
Msa0050500 AT4G30490.1 27.650 434 227 13 110 540 146 495 8.49e-37 143
Msa0050500 AT4G28070.2 30.000 320 169 9 142 461 142 406 7.10e-36 140
Msa0050500 AT4G28070.1 27.665 394 200 13 142 534 142 451 3.84e-31 126

Find 129 sgRNAs with CRISPR-Local

Find 639 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAAACCTTCTTTCTAATT+TGG 0.118749 1_2:+4403797 Msa0050500:CDS
GCAACTCCCTCGCAGCTTTC+AGG 0.157546 1_2:-4405321 None:intergenic
GTTAGGTTAATCTATCTAAT+TGG 0.161961 1_2:+4401151 Msa0050500:intron
TGGATCCAGGGGTAGGAAAA+TGG 0.233069 1_2:+4401563 Msa0050500:CDS
TTATGTTGCCTCTGAAAATA+AGG 0.237302 1_2:-4409358 None:intergenic
TTTGCTATTGTGGCTTTATC+TGG 0.250196 1_2:+4403472 Msa0050500:CDS
TACACGTTATGTAGATATTC+AGG 0.270643 1_2:+4409490 Msa0050500:three_prime_UTR
CATGCATTGCTGTGTTGTTT+AGG 0.310022 1_2:-4409609 None:intergenic
CCAAATTAGAAAGAAGGTTT+TGG 0.313607 1_2:-4403797 None:intergenic
CAGGATGCAACAGGCAGATT+TGG 0.318576 1_2:+4405162 Msa0050500:CDS
CTCTTCCTGACCAGATAGTA+TGG 0.342314 1_2:-4408851 None:intergenic
TTGATGGTTTCCCTTTCAAT+AGG 0.346062 1_2:-4405120 None:intergenic
AGAGATTAGTGAATTGTTAG+TGG 0.359245 1_2:+4409792 Msa0050500:three_prime_UTR
TTGAGATTGGAAATGTGAAT+TGG 0.363751 1_2:-4400104 None:intergenic
ATAACTCGTAATGACAAGTT+TGG 0.365863 1_2:-4399966 None:intergenic
TTAGGTTAATCTATCTAATT+GGG 0.371026 1_2:+4401152 Msa0050500:intron
CGGGAGTTGGAGGTTGAGAT+TGG 0.374547 1_2:-4400117 None:intergenic
CTGACTCCATCCAAGTATAA+TGG 0.380418 1_2:-4409325 None:intergenic
TACTGATTGTTTATTCCTTA+CGG 0.381406 1_2:+4409583 Msa0050500:three_prime_UTR
AGCTTCAGAATTTGTTATCA+AGG 0.390844 1_2:+4401000 Msa0050500:CDS
TCAGAATTTGTTATCAAGGT+TGG 0.392889 1_2:+4401004 Msa0050500:CDS
GGATCAAGAAGGAGAAGAAA+AGG 0.396933 1_2:+4402900 Msa0050500:CDS
TCCTTAGCTTTAGTGTCAAA+TGG 0.397452 1_2:-4402796 None:intergenic
TCAATTGATGAATTATTTCA+AGG 0.400199 1_2:+4406442 Msa0050500:CDS
AGTATGGATGTGATGCCAAC+AGG 0.401938 1_2:-4408835 None:intergenic
ATGGAGTTTGCATTTCAATC+AGG 0.404334 1_2:-4409306 None:intergenic
CGGAATTACGCGGGAGTTGG+AGG 0.404984 1_2:-4400127 None:intergenic
GGCATCACATCCATACTATC+TGG 0.409263 1_2:+4408841 Msa0050500:CDS
TGAGCGCCGAAGGATTCTTA+TGG 0.409862 1_2:+4401191 Msa0050500:CDS
TTTGTGCTTTGATGAGATAC+AGG 0.410864 1_2:+4402933 Msa0050500:CDS
GATCTTCCAAATTAGAAAGA+AGG 0.414619 1_2:-4403803 None:intergenic
TCATTCTTGTCTATGTTGCT+TGG 0.415282 1_2:+4406411 Msa0050500:CDS
TGATGGTTTCCCTTTCAATA+GGG 0.415283 1_2:-4405119 None:intergenic
AAACAATGAGAAGTAGAATC+TGG 0.415570 1_2:+4400052 Msa0050500:exon
CACACCTCATTCAAGTCCTT+TGG 0.415615 1_2:-4403553 None:intergenic
TCTTAAACGTGAGAAGAAGT+TGG 0.425289 1_2:+4401594 Msa0050500:CDS
TAGCACAAAGATCAGAAAAC+CGG 0.431848 1_2:+4403874 Msa0050500:CDS
CTTCAGCCTCTGTTTCAAAC+TGG 0.432094 1_2:-4408756 None:intergenic
AAGAAGTTGGATTCAGTAGT+TGG 0.438282 1_2:+4401607 Msa0050500:CDS
ACTATTTATGCCCTATTGAA+AGG 0.454914 1_2:+4405109 Msa0050500:CDS
GGAGAATTATGAGAGAGAAA+TGG 0.457162 1_2:+4401025 Msa0050500:CDS
CTATTTATGCCCTATTGAAA+GGG 0.458438 1_2:+4405110 Msa0050500:CDS
CACATCCATACTATCTGGTC+AGG 0.459198 1_2:+4408846 Msa0050500:CDS
AATGCAAACTCCATTATACT+TGG 0.459934 1_2:+4409315 Msa0050500:CDS
AACACCATTTCAGTGATGTT+CGG 0.464460 1_2:+4405201 Msa0050500:CDS
TGTTGATGTATTTGCTATTG+TGG 0.467315 1_2:+4403462 Msa0050500:CDS
GAAGAGAAGCCTTTGCAGTC+AGG 0.468263 1_2:+4402748 Msa0050500:CDS
AGACCGGAGAATGTGGATCC+AGG 0.470251 1_2:+4401550 Msa0050500:CDS
CCTTCCGAACATCACTGAAA+TGG 0.470791 1_2:-4405205 None:intergenic
GGGATGAACCTGGACGGTTA+TGG 0.470890 1_2:-4400188 None:intergenic
GGATCCAGGGGTAGGAAAAT+GGG 0.471492 1_2:+4401564 Msa0050500:CDS
ACCCCTGGATCCACATTCTC+CGG 0.477592 1_2:-4401553 None:intergenic
CGAATGCGCATGCTCATCAC+TGG 0.477595 1_2:-4406102 None:intergenic
TATGTTGCCTCTGAAAATAA+GGG 0.483340 1_2:-4409357 None:intergenic
GCAGAAGGCAACGTGGGCTC+AGG 0.491325 1_2:+4408805 Msa0050500:CDS
AAACGGAATTACGCGGGAGT+TGG 0.500568 1_2:-4400130 None:intergenic
TGACTATCTATGTGGTCGTC+CGG 0.502711 1_2:+4405356 Msa0050500:CDS
CAAGACATGGAAGAAACAAA+TGG 0.504054 1_2:+4402726 Msa0050500:CDS
CTTCCTCCATAAGAATCCTT+CGG 0.505769 1_2:-4401197 None:intergenic
AGCAGCAGAATGACAAGGAT+TGG 0.507679 1_2:+4401226 Msa0050500:CDS
GATGCAACAGGCAGATTTGG+AGG 0.510110 1_2:+4405165 Msa0050500:CDS
TCCATTTGACACTAAAGCTA+AGG 0.519936 1_2:+4402795 Msa0050500:CDS
ATAATAAAATCACTGAAAGA+TGG 0.521637 1_2:+4401262 Msa0050500:CDS
GGCTCAGGAGGTACCCCTGT+TGG 0.522358 1_2:+4408820 Msa0050500:CDS
TAGATAGTCAAATGTAAAGC+GGG 0.527142 1_2:-4405343 None:intergenic
TGGAATATCAGATATGAAAA+CGG 0.530816 1_2:-4406082 None:intergenic
TTTACATTTGACTATCTATG+TGG 0.531968 1_2:+4405348 Msa0050500:CDS
CAGTTTGAAACAGAGGCTGA+AGG 0.533189 1_2:+4408757 Msa0050500:CDS
GACCGGAGAATGTGGATCCA+GGG 0.536182 1_2:+4401551 Msa0050500:CDS
CAAACTCCATTATACTTGGA+TGG 0.538796 1_2:+4409319 Msa0050500:CDS
ACACACCGTTTGACAAGTCA+CGG 0.540971 1_2:-4409735 None:intergenic
CAGTTTCCAGTTTGAAACAG+AGG 0.543306 1_2:+4408750 Msa0050500:intron
ATGTTCATTTATTCTCAGCA+TGG 0.544311 1_2:-4402698 None:intergenic
CAGGAAAAGACCGGAGAATG+TGG 0.546258 1_2:+4401543 Msa0050500:intron
CTGAAAGATGGACAAACTCT+AGG 0.548929 1_2:+4401274 Msa0050500:CDS
CTAAGCAGATTGCTGAGTAG+TGG 0.551063 1_2:+4403499 Msa0050500:CDS
AGAAGAAAGATACAAGAAAG+AGG 0.556135 1_2:+4402831 Msa0050500:CDS
GTCTTAGCAGAAGGCAACGT+GGG 0.556790 1_2:+4408799 Msa0050500:CDS
CGCCGCGATGTCTTAGCAGA+AGG 0.558774 1_2:+4408790 Msa0050500:CDS
GAACATCACTGAAATGGTGT+TGG 0.561502 1_2:-4405199 None:intergenic
CATTGTGAGAAGGTGTTGGT+AGG 0.563706 1_2:+4403825 Msa0050500:CDS
AATTCCCGTGACTTGTCAAA+CGG 0.567855 1_2:+4409730 Msa0050500:three_prime_UTR
ATGAACATATGCACAAGACA+TGG 0.570304 1_2:+4402713 Msa0050500:CDS
TGCAGTCAGGCATTGCAAGT+TGG 0.571546 1_2:+4402761 Msa0050500:CDS
CTTGCAATGCCTGACTGCAA+AGG 0.573619 1_2:-4402757 None:intergenic
GAGGTTCCTGAAAGCTGCGA+GGG 0.575011 1_2:+4405315 Msa0050500:CDS
GAATAGTTAAACATCGAAGA+AGG 0.576214 1_2:+4402477 Msa0050500:CDS
GATCAAGAAGGAGAAGAAAA+GGG 0.580502 1_2:+4402901 Msa0050500:CDS
TTGAAACAGAGGCTGAAGGC+GGG 0.583908 1_2:+4408761 Msa0050500:CDS
AGCAGAATGACAAGGATTGG+TGG 0.584067 1_2:+4401229 Msa0050500:CDS
GAAGGCAACGTGGGCTCAGG+AGG 0.585167 1_2:+4408808 Msa0050500:CDS
TACAAGTAATCGAGCACCAA+AGG 0.585685 1_2:+4403537 Msa0050500:CDS
ATAGGGAGAATGAGCGCCGA+AGG 0.589964 1_2:+4401181 Msa0050500:CDS
GAGCATGCGCATTCGTGACA+AGG 0.591327 1_2:+4406110 Msa0050500:CDS
CCATTTCAGTGATGTTCGGA+AGG 0.596470 1_2:+4405205 Msa0050500:CDS
ATTCTCAACCATAACCGTCC+AGG 0.597324 1_2:+4400180 Msa0050500:CDS
TTTGGAAGATCATTGTGAGA+AGG 0.598544 1_2:+4403815 Msa0050500:CDS
TTATTTCAAGGAACTGAGGA+GGG 0.603288 1_2:+4406454 Msa0050500:CDS
AGATCATTGTGAGAAGGTGT+TGG 0.604039 1_2:+4403821 Msa0050500:CDS
TGAATTATTTCAAGGAACTG+AGG 0.605246 1_2:+4406450 Msa0050500:CDS
GAGAATGTGGATCCAGGGGT+AGG 0.610398 1_2:+4401556 Msa0050500:CDS
AGCACAAAGATCAGAAAACC+GGG 0.611413 1_2:+4403875 Msa0050500:CDS
GTATGGATGTGATGCCAACA+GGG 0.612420 1_2:-4408834 None:intergenic
TTAATGACTCAGGAAAAGAC+CGG 0.613019 1_2:+4401534 Msa0050500:intron
GTTGAGAATGCGTGATGGAT+CGG 0.613329 1_2:-4400166 None:intergenic
GTGTTGTTTAGGATACCGTA+AGG 0.617458 1_2:-4409598 None:intergenic
CACACCGTTTGACAAGTCAC+GGG 0.620663 1_2:-4409734 None:intergenic
AGCACCAAAGGACTTGAATG+AGG 0.623626 1_2:+4403549 Msa0050500:CDS
ATTATTTCAAGGAACTGAGG+AGG 0.624203 1_2:+4406453 Msa0050500:CDS
GTTGCCTCTGAAAATAAGGG+TGG 0.639611 1_2:-4409354 None:intergenic
TGAAGGGAAAACAATGCTGA+TGG 0.640075 1_2:+4402430 Msa0050500:intron
TTTGAAACAGAGGCTGAAGG+CGG 0.640142 1_2:+4408760 Msa0050500:CDS
ACCGGAGAATGTGGATCCAG+GGG 0.642420 1_2:+4401552 Msa0050500:CDS
GCGCCGAAGGATTCTTATGG+AGG 0.644834 1_2:+4401194 Msa0050500:CDS
ATCTTTGTGCTATAAAACGA+CGG 0.647255 1_2:-4403863 None:intergenic
ATAGATAGTCAAATGTAAAG+CGG 0.650519 1_2:-4405344 None:intergenic
TGAGGTTCCTGAAAGCTGCG+AGG 0.652315 1_2:+4405314 Msa0050500:CDS
TTGACACTAAAGCTAAGGAG+TGG 0.655831 1_2:+4402800 Msa0050500:CDS
TCGGTGCAGTAAGAACGAAA+CGG 0.666018 1_2:-4400147 None:intergenic
GAGTAGTGGAACTATTATTG+TGG 0.667886 1_2:+4403513 Msa0050500:CDS
AAGAACGAAACGGAATTACG+CGG 0.672121 1_2:-4400137 None:intergenic
AGAACGAAACGGAATTACGC+GGG 0.675655 1_2:-4400136 None:intergenic
TTATGGTTGAGAATGCGTGA+TGG 0.680934 1_2:-4400171 None:intergenic
AGAAGAGGGATGAACCTGGA+CGG 0.682270 1_2:-4400194 None:intergenic
AAGAAGGTATCACTTTCATG+AGG 0.691776 1_2:+4402493 Msa0050500:CDS
TGAGAAGCAGCAGAATGACA+AGG 0.697083 1_2:+4401221 Msa0050500:CDS
TGTCTTAGCAGAAGGCAACG+TGG 0.706451 1_2:+4408798 Msa0050500:CDS
TATGGATGTGATGCCAACAG+GGG 0.737847 1_2:-4408833 None:intergenic
TGCCTTCTGCTAAGACATCG+CGG 0.763605 1_2:-4408792 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTTTATTTAAACATTATT+CGG + chr1_2:4400664-4400683 Msa0050500:intron 10.0%
!! TGTATTTAGTAATAATAATA+TGG - chr1_2:4407802-4407821 None:intergenic 10.0%
!!! TATATTTTATGCTATATAAT+GGG - chr1_2:4408094-4408113 None:intergenic 10.0%
!!! TTATATTTTATGCTATATAA+TGG - chr1_2:4408095-4408114 None:intergenic 10.0%
!! ATTATATAGCATAAAATATA+AGG + chr1_2:4408094-4408113 Msa0050500:intron 10.0%
!! TTATATAGCATAAAATATAA+GGG + chr1_2:4408095-4408114 Msa0050500:intron 10.0%
!!! TTTTTATGCTATAAAAAAAA+GGG - chr1_2:4408290-4408309 None:intergenic 10.0%
!!! TTTTTTATGCTATAAAAAAA+AGG - chr1_2:4408291-4408310 None:intergenic 10.0%
!!! TCATTTTCTTAAATTATTAC+TGG + chr1_2:4400468-4400487 Msa0050500:intron 15.0%
!!! TTTAGTAAAAATAGTGTTTT+TGG + chr1_2:4401424-4401443 Msa0050500:intron 15.0%
!! TAAAAAACATGTTTACATAA+TGG - chr1_2:4401836-4401855 None:intergenic 15.0%
!!! ATTATGTAAACATGTTTTTT+AGG + chr1_2:4401835-4401854 Msa0050500:intron 15.0%
!!! TTATGTAAACATGTTTTTTA+GGG + chr1_2:4401836-4401855 Msa0050500:intron 15.0%
!! AAAATAATTAGAAAAGAAAC+TGG - chr1_2:4402393-4402412 None:intergenic 15.0%
!! ATAACCTGAATATTTATTTA+TGG + chr1_2:4402541-4402560 Msa0050500:intron 15.0%
!! CAAAAAAAAAAAAATCTTCA+GGG - chr1_2:4403672-4403691 None:intergenic 15.0%
!! GCATATAATAAAAAAGAATT+GGG - chr1_2:4404213-4404232 None:intergenic 15.0%
!! TGCATATAATAAAAAAGAAT+TGG - chr1_2:4404214-4404233 None:intergenic 15.0%
!!! TTTATTTTAATAACTGTGTA+TGG - chr1_2:4404296-4404315 None:intergenic 15.0%
!!! ATAAAATACATATACTTTTG+TGG - chr1_2:4405863-4405882 None:intergenic 15.0%
!! ATGATAAATAAGTTATGTAT+AGG - chr1_2:4405910-4405929 None:intergenic 15.0%
!! ATTATTGTAAAAACTTATCA+TGG + chr1_2:4406767-4406786 Msa0050500:intron 15.0%
!! ATTTAGTAATAATAATATGG+CGG - chr1_2:4407799-4407818 None:intergenic 15.0%
!! TATATAGCATAAAATATAAG+GGG + chr1_2:4408096-4408115 Msa0050500:intron 15.0%
!!! TTTTATGCTATAAAAAAAAG+GGG - chr1_2:4408289-4408308 None:intergenic 15.0%
!! ATAGCATAAAAAAATTTACT+TGG + chr1_2:4408298-4408317 Msa0050500:intron 15.0%
!!! TTATAATTAGTAGTTTTCAT+AGG + chr1_2:4408574-4408593 Msa0050500:intron 15.0%
!!! TTTGCGTTTATTTTATTACT+TGG - chr1_2:4400026-4400045 None:intergenic 20.0%
!! GAATAGAGTAAAATTCAATT+TGG - chr1_2:4400252-4400271 None:intergenic 20.0%
!! GATAGTGAATGAATATAAAA+AGG - chr1_2:4400797-4400816 None:intergenic 20.0%
!! ATTGTGTTAACTATCTAATT+TGG + chr1_2:4400845-4400864 Msa0050500:intron 20.0%
!! TTAGGTTAATCTATCTAATT+GGG + chr1_2:4401152-4401171 Msa0050500:intron 20.0%
!! ATAATAAAATCACTGAAAGA+TGG + chr1_2:4401262-4401281 Msa0050500:CDS 20.0%
!!! GTATATTTTGAGTCAATTTT+AGG + chr1_2:4401349-4401368 Msa0050500:intron 20.0%
!!! TTGCGAATTTTGTTTTATTT+AGG + chr1_2:4401468-4401487 Msa0050500:intron 20.0%
!!! ATTGATTTTATAACTTAACG+AGG - chr1_2:4402007-4402026 None:intergenic 20.0%
!! GTTAATGAAAATTGTAAACA+AGG + chr1_2:4402045-4402064 Msa0050500:intron 20.0%
!!! ATATGATACATTTTATCTCT+TGG + chr1_2:4402118-4402137 Msa0050500:intron 20.0%
!!! TATGATACATTTTATCTCTT+GGG + chr1_2:4402119-4402138 Msa0050500:intron 20.0%
!!! AGTGTAATTTTTATAATCAG+AGG + chr1_2:4402149-4402168 Msa0050500:intron 20.0%
!!! GTGTAATTTTTATAATCAGA+GGG + chr1_2:4402150-4402169 Msa0050500:intron 20.0%
!!! TGTAATTTTTATAATCAGAG+GGG + chr1_2:4402151-4402170 Msa0050500:intron 20.0%
!! ACCATAATTAGAAATTGAAT+CGG - chr1_2:4402281-4402300 None:intergenic 20.0%
!! AAGACCATAAATAAATATTC+AGG - chr1_2:4402548-4402567 None:intergenic 20.0%
!!! ATGTCATCAATATTATTTTC+TGG + chr1_2:4402578-4402597 Msa0050500:intron 20.0%
!!! GAAATCTATACTTTTACTTT+AGG - chr1_2:4403008-4403027 None:intergenic 20.0%
!!! CTTATTGAGTTTTTTGTTTT+CGG + chr1_2:4403074-4403093 Msa0050500:intron 20.0%
!!! TTTTTCATGATTCATTTGAA+AGG + chr1_2:4403131-4403150 Msa0050500:intron 20.0%
!!! ATTCATTTGAAAGGATTTTA+GGG + chr1_2:4403140-4403159 Msa0050500:intron 20.0%
!!! TCATTTTTTCTTTCATACTT+TGG + chr1_2:4403392-4403411 Msa0050500:intron 20.0%
!! CCAAAAAAAAAAAAATCTTC+AGG - chr1_2:4403673-4403692 None:intergenic 20.0%
!!! CCTGAAGATTTTTTTTTTTT+TGG + chr1_2:4403670-4403689 Msa0050500:intron 20.0%
!! AATATCAATAAACAAGTATG+AGG - chr1_2:4403728-4403747 None:intergenic 20.0%
!! AAAATAGATCAAATAATTGG+TGG - chr1_2:4404007-4404026 None:intergenic 20.0%
!! GGAAAAATAGATCAAATAAT+TGG - chr1_2:4404010-4404029 None:intergenic 20.0%
!! TGGGTATTTATCTATTAATA+TGG - chr1_2:4404164-4404183 None:intergenic 20.0%
!! TAATAAAAAAGAATTGGGTT+AGG - chr1_2:4404208-4404227 None:intergenic 20.0%
!!! TTTTTATTATATGCATCTCT+AGG + chr1_2:4404219-4404238 Msa0050500:intron 20.0%
!! TGATGTATATAAGAAATCAA+TGG - chr1_2:4404269-4404288 None:intergenic 20.0%
!! GAATGATCTAATATTGTTAA+TGG + chr1_2:4404470-4404489 Msa0050500:intron 20.0%
!! TATAAAAGTCAATATGGAAT+GGG - chr1_2:4404539-4404558 None:intergenic 20.0%
!! ATATAAAAGTCAATATGGAA+TGG - chr1_2:4404540-4404559 None:intergenic 20.0%
!!! TTCCATATTGACTTTTATAT+TGG + chr1_2:4404540-4404559 Msa0050500:intron 20.0%
!! AACCAATATAAAAGTCAATA+TGG - chr1_2:4404545-4404564 None:intergenic 20.0%
!!! TTTTCTATTATACACTACTT+TGG + chr1_2:4404919-4404938 Msa0050500:intron 20.0%
!! TGACAGCATTAAATATAAAT+AGG - chr1_2:4405241-4405260 None:intergenic 20.0%
!! AGAAGAACAAAGTTTATATA+AGG - chr1_2:4405595-4405614 None:intergenic 20.0%
!!! AATAGCTAAAGCTAATATTT+TGG + chr1_2:4405966-4405985 Msa0050500:intron 20.0%
!!! ATAGCTAAAGCTAATATTTT+GGG + chr1_2:4405967-4405986 Msa0050500:intron 20.0%
!!! TGACAAGGTATTAATTAAAA+CGG + chr1_2:4406125-4406144 Msa0050500:intron 20.0%
!!! ATTTTAAGAAGACATATTGT+TGG + chr1_2:4406185-4406204 Msa0050500:intron 20.0%
!! TCAATTGATGAATTATTTCA+AGG + chr1_2:4406442-4406461 Msa0050500:CDS 20.0%
!! ATTTCAAAGTATAAATGCTT+TGG + chr1_2:4406547-4406566 Msa0050500:intron 20.0%
!! AAATACATTTGAAAAAGTCA+AGG - chr1_2:4407392-4407411 None:intergenic 20.0%
!! ATATAGCATAAAATATAAGG+GGG + chr1_2:4408097-4408116 Msa0050500:intron 20.0%
!!! AGATTTTTCTTGATAATATG+TGG + chr1_2:4408551-4408570 Msa0050500:intron 20.0%
!! ACTTACAATAAAAAGAATGT+TGG - chr1_2:4408614-4408633 None:intergenic 20.0%
!! TTTCAGCATAATGTTATAAA+TGG - chr1_2:4408948-4408967 None:intergenic 20.0%
!! TTTATAACATTATGCTGAAA+TGG + chr1_2:4408948-4408967 Msa0050500:intron 20.0%
!! TTCTCATATTTCATGATAAA+TGG + chr1_2:4409090-4409109 Msa0050500:intron 20.0%
!!! TAACATTGATTTTTCATTGT+AGG + chr1_2:4409276-4409295 Msa0050500:intron 20.0%
! AATTGCTAATGTTGAATTGA+AGG - chr1_2:4400226-4400245 None:intergenic 25.0%
!! ACAGTAAATATGATTTTGAG+AGG - chr1_2:4400280-4400299 None:intergenic 25.0%
! TCATTGTTAATTGTGTTTAG+TGG - chr1_2:4400583-4400602 None:intergenic 25.0%
! TTTGAATTGAACATCATTTG+TGG + chr1_2:4400604-4400623 Msa0050500:intron 25.0%
!! ATTTTGAATGTGATTAACCA+CGG - chr1_2:4400730-4400749 None:intergenic 25.0%
! TACAAAAATCTTGTTGATCA+AGG + chr1_2:4400936-4400955 Msa0050500:intron 25.0%
! ACAAAAATCTTGTTGATCAA+GGG + chr1_2:4400937-4400956 Msa0050500:intron 25.0%
!! AATTTGTTCTTGTACTTGTT+AGG + chr1_2:4401134-4401153 Msa0050500:intron 25.0%
! GTTAGGTTAATCTATCTAAT+TGG + chr1_2:4401151-4401170 Msa0050500:intron 25.0%
! TATCTAATTGGGAGAAAAAT+AGG + chr1_2:4401163-4401182 Msa0050500:CDS 25.0%
! ATCTAATTGGGAGAAAAATA+GGG + chr1_2:4401164-4401183 Msa0050500:CDS 25.0%
!! TATTTGTTTGTTAATGACTC+AGG + chr1_2:4401524-4401543 Msa0050500:intron 25.0%
!! ACCTTCTTATATTTGTCTTT+TGG + chr1_2:4401698-4401717 Msa0050500:intron 25.0%
!! CCTTCTTATATTTGTCTTTT+GGG + chr1_2:4401699-4401718 Msa0050500:intron 25.0%
! AATGAAATTTAACCATCTTG+AGG - chr1_2:4401747-4401766 None:intergenic 25.0%
!! ATTGTGATTTTCAAAATCAG+AGG - chr1_2:4401777-4401796 None:intergenic 25.0%
! TAAACAAGGAAAAAATTCAG+CGG + chr1_2:4402059-4402078 Msa0050500:intron 25.0%
! GAGTTTATTTATATGCTCAT+CGG + chr1_2:4402082-4402101 Msa0050500:intron 25.0%
!! ATGATACATTTTATCTCTTG+GGG + chr1_2:4402120-4402139 Msa0050500:intron 25.0%
!!! TTTAATTTGGCTGATTTTTG+TGG + chr1_2:4402228-4402247 Msa0050500:intron 25.0%
! CCATAATTAGAAATTGAATC+GGG - chr1_2:4402280-4402299 None:intergenic 25.0%
! AATAAGGCTAAAAAGAGAAT+CGG - chr1_2:4402367-4402386 None:intergenic 25.0%
! GAAAAGAAACTGGAAAAATA+AGG - chr1_2:4402383-4402402 None:intergenic 25.0%
!!! TACTTTAGGATACAAATATG+AGG - chr1_2:4402994-4403013 None:intergenic 25.0%
! AAGTGTTAAATCAGAATTGA+CGG - chr1_2:4403042-4403061 None:intergenic 25.0%
!! GATTCATTTGAAAGGATTTT+AGG + chr1_2:4403139-4403158 Msa0050500:intron 25.0%
!!! TCAAAAATGTTTTTTTGTGC+AGG + chr1_2:4403752-4403771 Msa0050500:intron 25.0%
! ATATCTTAAACAGCTATTTG+AGG - chr1_2:4404031-4404050 None:intergenic 25.0%
! ATTGTATTTGCACTATATTG+TGG + chr1_2:4404243-4404262 Msa0050500:intron 25.0%
! AAATGTAAAAGTTGAGAGTT+TGG + chr1_2:4404314-4404333 Msa0050500:intron 25.0%
!!! TTTGGTTTTGAATACAATAG+AGG + chr1_2:4404332-4404351 Msa0050500:intron 25.0%
!!! TTGGTTTTGAATACAATAGA+GGG + chr1_2:4404333-4404352 Msa0050500:intron 25.0%
!!! ACTTTTATATTGGTTGTGTT+TGG + chr1_2:4404550-4404569 Msa0050500:intron 25.0%
! TAACCATAAATAAACAGTTG+TGG + chr1_2:4404611-4404630 Msa0050500:intron 25.0%
! TGAATTGGCATTTCATAATT+TGG - chr1_2:4404738-4404757 None:intergenic 25.0%
! TGATTATATTGTTGAGTAGA+AGG - chr1_2:4404833-4404852 None:intergenic 25.0%
! CTACTCAACAATATAATCAT+AGG + chr1_2:4404834-4404853 Msa0050500:intron 25.0%
! TCAACAATATAATCATAGGA+TGG + chr1_2:4404838-4404857 Msa0050500:intron 25.0%
!!! TTAAGTTGATATAGATATGC+AGG + chr1_2:4405083-4405102 Msa0050500:intron 25.0%
! ATATTTAATGCTGTCAAACA+AGG + chr1_2:4405245-4405264 Msa0050500:intron 25.0%
!!! TCATATAAGTTTTTTGTGAC+AGG + chr1_2:4405286-4405305 Msa0050500:intron 25.0%
! ATAGATAGTCAAATGTAAAG+CGG - chr1_2:4405347-4405366 None:intergenic 25.0%
! TTTACATTTGACTATCTATG+TGG + chr1_2:4405348-4405367 Msa0050500:CDS 25.0%
! TTTGTTTCCAACTAAGTTAT+GGG - chr1_2:4405718-4405737 None:intergenic 25.0%
! ATTTGTTTCCAACTAAGTTA+TGG - chr1_2:4405719-4405738 None:intergenic 25.0%
!!! ATTTGATAATTTTTTGCCAG+TGG + chr1_2:4405755-4405774 Msa0050500:intron 25.0%
! TGGAATATCAGATATGAAAA+CGG - chr1_2:4406085-4406104 None:intergenic 25.0%
!! GACAAGGTATTAATTAAAAC+GGG + chr1_2:4406126-4406145 Msa0050500:intron 25.0%
! TAGTCAATTATAAACACATG+AGG - chr1_2:4406161-4406180 None:intergenic 25.0%
!! TTTTTGCTCAAAATAAGACA+GGG - chr1_2:4406330-4406349 None:intergenic 25.0%
!!! TTTTTTGCTCAAAATAAGAC+AGG - chr1_2:4406331-4406350 None:intergenic 25.0%
!!! AAAAACATTCTCTACTTTTC+AGG + chr1_2:4406348-4406367 Msa0050500:intron 25.0%
!! TCAACAAACAATCTAGAATT+AGG - chr1_2:4406715-4406734 None:intergenic 25.0%
!! GACTTTTAGCATCTATAAAA+GGG - chr1_2:4407063-4407082 None:intergenic 25.0%
! TAAAGTAGAAGAATATAGAG+AGG - chr1_2:4407194-4407213 None:intergenic 25.0%
! TTACACTGCTAATTATTCAA+AGG + chr1_2:4407224-4407243 Msa0050500:intron 25.0%
! TACACTGCTAATTATTCAAA+GGG + chr1_2:4407225-4407244 Msa0050500:intron 25.0%
! TTCAAAATAAATATCAGCCT+TGG + chr1_2:4407416-4407435 Msa0050500:intron 25.0%
!! AGGTCTATTTTATCAAACAT+CGG + chr1_2:4407453-4407472 Msa0050500:intron 25.0%
! GTAGAAAATGTCAATTGAAA+AGG - chr1_2:4407487-4407506 None:intergenic 25.0%
! TGTGTAATACTGTAGTTATA+TGG - chr1_2:4407738-4407757 None:intergenic 25.0%
! AATAATATGGCGGTTATATA+TGG - chr1_2:4407789-4407808 None:intergenic 25.0%
! ACTCTAATAAATAACTGTCA+TGG - chr1_2:4408005-4408024 None:intergenic 25.0%
!!! ATCAGATATAAATTTGTTGC+AGG - chr1_2:4408037-4408056 None:intergenic 25.0%
!! ATAATGGGAAAAGTAATGTT+TGG - chr1_2:4408079-4408098 None:intergenic 25.0%
! AAAAAATTTACTTGGCAAGA+AGG + chr1_2:4408306-4408325 Msa0050500:intron 25.0%
! AAAAATTTACTTGGCAAGAA+GGG + chr1_2:4408307-4408326 Msa0050500:intron 25.0%
! AGTAACTTAACATAGATCTA+TGG - chr1_2:4408354-4408373 None:intergenic 25.0%
!!! GTTAAGTTACTTCCTTTTTT+TGG + chr1_2:4408363-4408382 Msa0050500:intron 25.0%
!! TACCTTTTAAATCAAGGATA+TGG - chr1_2:4408460-4408479 None:intergenic 25.0%
!! GAAGTTTACCTTTTAAATCA+AGG - chr1_2:4408466-4408485 None:intergenic 25.0%
! TGTAAGCAGACTTAAAAATA+AGG + chr1_2:4408513-4408532 Msa0050500:intron 25.0%
! CTCTTAATTATATGATGCAT+TGG + chr1_2:4408696-4408715 Msa0050500:intron 25.0%
!! TACTGATTGTTTATTCCTTA+CGG + chr1_2:4409583-4409602 Msa0050500:three_prime_UTR 25.0%
ATAACTCGTAATGACAAGTT+TGG - chr1_2:4399969-4399988 None:intergenic 30.0%
AAACAATGAGAAGTAGAATC+TGG + chr1_2:4400052-4400071 Msa0050500:exon 30.0%
TTGAGATTGGAAATGTGAAT+TGG - chr1_2:4400107-4400126 None:intergenic 30.0%
AGCTAATACAATTCAGTTGA+TGG + chr1_2:4400349-4400368 Msa0050500:intron 30.0%
GTTAATCACATTCAAAATCG+TGG + chr1_2:4400732-4400751 Msa0050500:intron 30.0%
! AATAACACAACTCGATTTTC+AGG + chr1_2:4400900-4400919 Msa0050500:intron 30.0%
! GATCAACAAGATTTTTGTAC+TGG - chr1_2:4400935-4400954 None:intergenic 30.0%
!! AGCTTCAGAATTTGTTATCA+AGG + chr1_2:4401000-4401019 Msa0050500:CDS 30.0%
!! TCAGAATTTGTTATCAAGGT+TGG + chr1_2:4401004-4401023 Msa0050500:CDS 30.0%
TATGACTTCTTCATTGTTTC+TGG + chr1_2:4401093-4401112 Msa0050500:intron 30.0%
CCATATATGTAAAGTCCTTT+GGG - chr1_2:4401658-4401677 None:intergenic 30.0%
ACTTTACATATATGGCAATG+TGG + chr1_2:4401663-4401682 Msa0050500:intron 30.0%
CTTTACATATATGGCAATGT+GGG + chr1_2:4401664-4401683 Msa0050500:intron 30.0%
CCCAAAAGACAAATATAAGA+AGG - chr1_2:4401702-4401721 None:intergenic 30.0%
AAATTTAACCATCTTGAGGA+TGG - chr1_2:4401743-4401762 None:intergenic 30.0%
GTAACTCATTCATCTTCTAA+GGG - chr1_2:4401805-4401824 None:intergenic 30.0%
AGTAACTCATTCATCTTCTA+AGG - chr1_2:4401806-4401825 None:intergenic 30.0%
!! TTAGTCTCAGTTGATAATAG+AGG - chr1_2:4401910-4401929 None:intergenic 30.0%
TCAACTGAGACTAAAGAAAA+TGG + chr1_2:4401916-4401935 Msa0050500:intron 30.0%
ATGGAATGAAATGAATGCTT+CGG + chr1_2:4401935-4401954 Msa0050500:intron 30.0%
AAACAAGGAAAAAATTCAGC+GGG + chr1_2:4402060-4402079 Msa0050500:intron 30.0%
GCAGTAATGCTAAATTACAA+TGG + chr1_2:4402254-4402273 Msa0050500:intron 30.0%
CCCGATTCAATTTCTAATTA+TGG + chr1_2:4402277-4402296 Msa0050500:intron 30.0%
ATGGTATTGCTTAAAGTTTC+TGG + chr1_2:4402296-4402315 Msa0050500:intron 30.0%
ATAAGGCTAAAAAGAGAATC+GGG - chr1_2:4402366-4402385 None:intergenic 30.0%
!! ATGTTTTATAGTGCTACTGA+AGG + chr1_2:4402455-4402474 Msa0050500:CDS 30.0%
GAATAGTTAAACATCGAAGA+AGG + chr1_2:4402477-4402496 Msa0050500:CDS 30.0%
!!! TGAGTGTTTTAATGTGTTTG+TGG + chr1_2:4402516-4402535 Msa0050500:intron 30.0%
!!! GAGTGTTTTAATGTGTTTGT+GGG + chr1_2:4402517-4402536 Msa0050500:intron 30.0%
ATGTTCACAACAATGATTCA+TGG - chr1_2:4402633-4402652 None:intergenic 30.0%
ATGTTCATTTATTCTCAGCA+TGG - chr1_2:4402701-4402720 None:intergenic 30.0%
AGAAGAAAGATACAAGAAAG+AGG + chr1_2:4402831-4402850 Msa0050500:CDS 30.0%
AAAAACTTATCTGCTACATC+TGG - chr1_2:4402877-4402896 None:intergenic 30.0%
!!! TGTAGCAGATAAGTTTTTTC+TGG + chr1_2:4402879-4402898 Msa0050500:CDS 30.0%
!!! AAGTTTTTTCTGGATCAAGA+AGG + chr1_2:4402889-4402908 Msa0050500:CDS 30.0%
! AAATCAGAATTGACGGATAT+GGG - chr1_2:4403035-4403054 None:intergenic 30.0%
! TAAATCAGAATTGACGGATA+TGG - chr1_2:4403036-4403055 None:intergenic 30.0%
CAATTCTGATTTAACACTTG+AGG + chr1_2:4403043-4403062 Msa0050500:intron 30.0%
!!! TTTTTGTTTTCGGTGACTAA+TGG + chr1_2:4403084-4403103 Msa0050500:intron 30.0%
!!! TTTTGTTTTCGGTGACTAAT+GGG + chr1_2:4403085-4403104 Msa0050500:intron 30.0%
ATCATGTTAAGAATAAGCCA+AGG - chr1_2:4403349-4403368 None:intergenic 30.0%
!! TGTTGATGTATTTGCTATTG+TGG + chr1_2:4403462-4403481 Msa0050500:CDS 30.0%
GCAACATAATTGAGTAACAA+AGG - chr1_2:4403621-4403640 None:intergenic 30.0%
TTGTTACTCAATTATGTTGC+AGG + chr1_2:4403621-4403640 Msa0050500:intron 30.0%
TGTTACTCAATTATGTTGCA+GGG + chr1_2:4403622-4403641 Msa0050500:intron 30.0%
ATTGTAGACCAATTGGAAAA+GGG + chr1_2:4403702-4403721 Msa0050500:intron 30.0%
! CCAAATTAGAAAGAAGGTTT+TGG - chr1_2:4403800-4403819 None:intergenic 30.0%
CCAAAACCTTCTTTCTAATT+TGG + chr1_2:4403797-4403816 Msa0050500:CDS 30.0%
GATCTTCCAAATTAGAAAGA+AGG - chr1_2:4403806-4403825 None:intergenic 30.0%
ATCTTTGTGCTATAAAACGA+CGG - chr1_2:4403866-4403885 None:intergenic 30.0%
GACATCACATGTTTACATAA+AGG - chr1_2:4403927-4403946 None:intergenic 30.0%
ATATAATTCCACTGCTACTA+TGG - chr1_2:4403984-4404003 None:intergenic 30.0%
TACACAATGACATTCATTGA+TGG - chr1_2:4404497-4404516 None:intergenic 30.0%
! TAGTAGTTACTTTGCATCAT+CGG + chr1_2:4404679-4404698 Msa0050500:intron 30.0%
ATGCCAATTCAATGTAAATG+TGG + chr1_2:4404747-4404766 Msa0050500:intron 30.0%
AAGCCACATTTACATTGAAT+TGG - chr1_2:4404753-4404772 None:intergenic 30.0%
CTGTACAATATTTGTAAGGT+TGG - chr1_2:4404803-4404822 None:intergenic 30.0%
TTGGCTGTACAATATTTGTA+AGG - chr1_2:4404807-4404826 None:intergenic 30.0%
! ATTGTTGAGTAGAAGGATTT+TGG - chr1_2:4404826-4404845 None:intergenic 30.0%
TATAATCATAGGATGGAAAC+TGG + chr1_2:4404845-4404864 Msa0050500:intron 30.0%
TCTTTCAATGATGTCAAACA+TGG - chr1_2:4404894-4404913 None:intergenic 30.0%
ACTATTTATGCCCTATTGAA+AGG + chr1_2:4405109-4405128 Msa0050500:CDS 30.0%
CTATTTATGCCCTATTGAAA+GGG + chr1_2:4405110-4405129 Msa0050500:CDS 30.0%
TAGATAGTCAAATGTAAAGC+GGG - chr1_2:4405346-4405365 None:intergenic 30.0%
ATAGTTACCAGCATATTGTT+TGG + chr1_2:4405432-4405451 Msa0050500:intron 30.0%
TACAAAAGAAGAAGAGAAAG+TGG - chr1_2:4405690-4405709 None:intergenic 30.0%
TATAAACCCCATAACTTAGT+TGG + chr1_2:4405708-4405727 Msa0050500:intron 30.0%
TTGTTTCCAACTAAGTTATG+GGG - chr1_2:4405717-4405736 None:intergenic 30.0%
! TAACTGTTTCGATTTTCAGT+TGG + chr1_2:4406020-4406039 Msa0050500:intron 30.0%
! AACTGTTTCGATTTTCAGTT+GGG + chr1_2:4406021-4406040 Msa0050500:intron 30.0%
!! TTAATTAAAACGGGTTGAGT+TGG + chr1_2:4406135-4406154 Msa0050500:intron 30.0%
TGAATTATTTCAAGGAACTG+AGG + chr1_2:4406450-4406469 Msa0050500:CDS 30.0%
TGTATGTGATTTATGATGCA+TGG + chr1_2:4406513-4406532 Msa0050500:intron 30.0%
TGACAGTGAAGTGATAAAAA+AGG - chr1_2:4406604-4406623 None:intergenic 30.0%
ACTGTCAATATATTATCCAG+TGG + chr1_2:4406617-4406636 Msa0050500:intron 30.0%
CAGTTAGAGATGTTTAGTTA+GGG + chr1_2:4406860-4406879 Msa0050500:intron 30.0%
AGTTAGAGATGTTTAGTTAG+GGG + chr1_2:4406861-4406880 Msa0050500:intron 30.0%
GATGATTCAGAAACATTGTT+AGG + chr1_2:4406898-4406917 Msa0050500:intron 30.0%
! GGACTTTTAGCATCTATAAA+AGG - chr1_2:4407064-4407083 None:intergenic 30.0%
ATTAGCAGTGTAAGATAGAT+TGG - chr1_2:4407217-4407236 None:intergenic 30.0%
ACACTGCTAATTATTCAAAG+GGG + chr1_2:4407226-4407245 Msa0050500:intron 30.0%
GAAAATGTCAATTGAAAAGG+TGG - chr1_2:4407484-4407503 None:intergenic 30.0%
AAAACCACAAGGTAAATCTT+GGG - chr1_2:4407514-4407533 None:intergenic 30.0%
CAACAACTGATAGCAAAAAA+GGG - chr1_2:4407605-4407624 None:intergenic 30.0%
TCAACAACTGATAGCAAAAA+AGG - chr1_2:4407606-4407625 None:intergenic 30.0%
GTGAGAAATAAGACAATAAC+AGG - chr1_2:4407827-4407846 None:intergenic 30.0%
TATTAACAAAGCCTAAACTG+TGG - chr1_2:4407862-4407881 None:intergenic 30.0%
ATATAATGTAGAAGAGAGAC+AGG - chr1_2:4407926-4407945 None:intergenic 30.0%
! GTAATGTTTGGTTTCTTGTT+TGG - chr1_2:4408067-4408086 None:intergenic 30.0%
!!! TTCCTTTTTTTGGTGAAGTT+AGG + chr1_2:4408373-4408392 Msa0050500:intron 30.0%
AACCTAACTTCACCAAAAAA+AGG - chr1_2:4408378-4408397 None:intergenic 30.0%
!! ACCACTTTTACAATCATCTT+GGG - chr1_2:4408409-4408428 None:intergenic 30.0%
!! AACCACTTTTACAATCATCT+TGG - chr1_2:4408410-4408429 None:intergenic 30.0%
GACCATATCCTTGATTTAAA+AGG + chr1_2:4408455-4408474 Msa0050500:intron 30.0%
! TTTTCATAGGTTCTGTTCTT+TGG + chr1_2:4408587-4408606 Msa0050500:intron 30.0%
TTTCATAGGTTCTGTTCTTT+GGG + chr1_2:4408588-4408607 Msa0050500:intron 30.0%
CATATACGGAGAATAAATCA+AGG - chr1_2:4409035-4409054 None:intergenic 30.0%
! GGTGCTGAACATATAATATT+AGG + chr1_2:4409111-4409130 Msa0050500:intron 30.0%
TTGAATTCCTTATATTGCTC+TGG + chr1_2:4409225-4409244 Msa0050500:intron 30.0%
AATGCAAACTCCATTATACT+TGG + chr1_2:4409315-4409334 Msa0050500:CDS 30.0%
! TATGTTGCCTCTGAAAATAA+GGG - chr1_2:4409360-4409379 None:intergenic 30.0%
! TTATGTTGCCTCTGAAAATA+AGG - chr1_2:4409361-4409380 None:intergenic 30.0%
TACACGTTATGTAGATATTC+AGG + chr1_2:4409490-4409509 Msa0050500:three_prime_UTR 30.0%
ATTGAAGGAGAAAGAGAAGA+GGG - chr1_2:4400211-4400230 None:intergenic 35.0%
AATTGAAGGAGAAAGAGAAG+AGG - chr1_2:4400212-4400231 None:intergenic 35.0%
! TATTCGATCATCAGAAGTGT+CGG - chr1_2:4400397-4400416 None:intergenic 35.0%
GAAGATATAACTATGTGTCC+TGG + chr1_2:4400545-4400564 Msa0050500:intron 35.0%
! TAGTGGATGATTTATGAACC+AGG - chr1_2:4400566-4400585 None:intergenic 35.0%
ATTGTGTAGATTTGAGCACT+TGG + chr1_2:4400636-4400655 Msa0050500:intron 35.0%
TTGTGTAGATTTGAGCACTT+GGG + chr1_2:4400637-4400656 Msa0050500:intron 35.0%
ATTTGAACACTTGAAAACCG+TGG + chr1_2:4400710-4400729 Msa0050500:intron 35.0%
! AGATTTTTGTACTGGACAAG+CGG - chr1_2:4400927-4400946 None:intergenic 35.0%
GGAGAATTATGAGAGAGAAA+TGG + chr1_2:4401025-4401044 Msa0050500:CDS 35.0%
!!! CTTCATTGTTTCTGGCTTTT+TGG + chr1_2:4401101-4401120 Msa0050500:intron 35.0%
TTAATGACTCAGGAAAAGAC+CGG + chr1_2:4401534-4401553 Msa0050500:intron 35.0%
TCTTAAACGTGAGAAGAAGT+TGG + chr1_2:4401594-4401613 Msa0050500:CDS 35.0%
AAGAAGTTGGATTCAGTAGT+TGG + chr1_2:4401607-4401626 Msa0050500:CDS 35.0%
CCCAAAGGACTTTACATATA+TGG + chr1_2:4401655-4401674 Msa0050500:intron 35.0%
GCCATATATGTAAAGTCCTT+TGG - chr1_2:4401659-4401678 None:intergenic 35.0%
TGTAGTTAAAGCAGCTTTCA+AGG + chr1_2:4402182-4402201 Msa0050500:intron 35.0%
TAAGGCTAAAAAGAGAATCG+GGG - chr1_2:4402365-4402384 None:intergenic 35.0%
!! AAGAAGGTATCACTTTCATG+AGG + chr1_2:4402493-4402512 Msa0050500:CDS 35.0%
! ATGATTCATGGTCTTGCTAT+AGG - chr1_2:4402621-4402640 None:intergenic 35.0%
ATGAACATATGCACAAGACA+TGG + chr1_2:4402713-4402732 Msa0050500:CDS 35.0%
CAAGACATGGAAGAAACAAA+TGG + chr1_2:4402726-4402745 Msa0050500:CDS 35.0%
TCCATTTGACACTAAAGCTA+AGG + chr1_2:4402795-4402814 Msa0050500:CDS 35.0%
!! TCCTTAGCTTTAGTGTCAAA+TGG - chr1_2:4402799-4402818 None:intergenic 35.0%
GATCAAGAAGGAGAAGAAAA+GGG + chr1_2:4402901-4402920 Msa0050500:CDS 35.0%
TTTGTGCTTTGATGAGATAC+AGG + chr1_2:4402933-4402952 Msa0050500:CDS 35.0%
CTTTGATGAGATACAGGTAA+AGG + chr1_2:4402939-4402958 Msa0050500:intron 35.0%
ACACATACTAAAGTAGACCA+GGG - chr1_2:4403188-4403207 None:intergenic 35.0%
AACACATACTAAAGTAGACC+AGG - chr1_2:4403189-4403208 None:intergenic 35.0%
! TGATCTGGAACAGAAGATAT+GGG - chr1_2:4403249-4403268 None:intergenic 35.0%
! ATGATCTGGAACAGAAGATA+TGG - chr1_2:4403250-4403269 None:intergenic 35.0%
!! GTTGTAAGTTTGAGTTGCTT+TGG + chr1_2:4403311-4403330 Msa0050500:intron 35.0%
TGTTAAGAATAAGCCAAGGA+GGG - chr1_2:4403345-4403364 None:intergenic 35.0%
ATGTTAAGAATAAGCCAAGG+AGG - chr1_2:4403346-4403365 None:intergenic 35.0%
!! CTTTCATACTTTGGCTTGTA+AGG + chr1_2:4403401-4403420 Msa0050500:intron 35.0%
!! TTTGCTATTGTGGCTTTATC+TGG + chr1_2:4403472-4403491 Msa0050500:CDS 35.0%
! GAGTAGTGGAACTATTATTG+TGG + chr1_2:4403513-4403532 Msa0050500:CDS 35.0%
GTTACTCAATTATGTTGCAG+GGG + chr1_2:4403623-4403642 Msa0050500:intron 35.0%
TTACTCAATTATGTTGCAGG+GGG + chr1_2:4403624-4403643 Msa0050500:intron 35.0%
AAAATCTTCAGGGATGTCTT+CGG - chr1_2:4403662-4403681 None:intergenic 35.0%
GATCTTGATTGTAGACCAAT+TGG + chr1_2:4403695-4403714 Msa0050500:intron 35.0%
GATTGTAGACCAATTGGAAA+AGG + chr1_2:4403701-4403720 Msa0050500:intron 35.0%
!!! AAATGTTTTTTTGTGCAGGC+TGG + chr1_2:4403756-4403775 Msa0050500:intron 35.0%
!!! AGAAGGTTTTGGAAGAATTC+TGG - chr1_2:4403789-4403808 None:intergenic 35.0%
TTTGGAAGATCATTGTGAGA+AGG + chr1_2:4403815-4403834 Msa0050500:CDS 35.0%
TAGCACAAAGATCAGAAAAC+CGG + chr1_2:4403874-4403893 Msa0050500:CDS 35.0%
GAGGGAATAATCAATAGCTT+AGG + chr1_2:4404351-4404370 Msa0050500:intron 35.0%
! GGCTTTGTATTACCTACAAA+GGG + chr1_2:4404386-4404405 Msa0050500:intron 35.0%
AGCGAAATCTTCATTTCTGA+TGG + chr1_2:4404412-4404431 Msa0050500:intron 35.0%
!!! GGTTGTGTTTGGTTTTCTTA+AGG + chr1_2:4404561-4404580 Msa0050500:intron 35.0%
TTCTTAAGGTGTGTAAACGT+TGG + chr1_2:4404575-4404594 Msa0050500:intron 35.0%
GAGCCACAACTGTTTATTTA+TGG - chr1_2:4404617-4404636 None:intergenic 35.0%
! TGAGTTCTAGTAGGCATAAT+AGG - chr1_2:4405043-4405062 None:intergenic 35.0%
! TTTGAGACTTGAGTTCTAGT+AGG - chr1_2:4405052-4405071 None:intergenic 35.0%
AACTCAAGTCTCAAACGTAT+GGG + chr1_2:4405057-4405076 Msa0050500:intron 35.0%
TGATGGTTTCCCTTTCAATA+GGG - chr1_2:4405122-4405141 None:intergenic 35.0%
! TTGATGGTTTCCCTTTCAAT+AGG - chr1_2:4405123-4405142 None:intergenic 35.0%
AACACCATTTCAGTGATGTT+CGG + chr1_2:4405201-4405220 Msa0050500:CDS 35.0%
AACAAAGAGAAAGAACACAC+CGG - chr1_2:4405378-4405397 None:intergenic 35.0%
GTGTGTTCTTTCTCTTTGTT+TGG + chr1_2:4405378-4405397 Msa0050500:intron 35.0%
TGCTGGTAACTATATTTGCT+AGG - chr1_2:4405425-4405444 None:intergenic 35.0%
ATGACAGAGGGGAATAAAAA+TGG - chr1_2:4405510-4405529 None:intergenic 35.0%
! TTTTTATTCCCCTCTGTCAT+TGG + chr1_2:4405510-4405529 Msa0050500:intron 35.0%
! TTTTATTCCCCTCTGTCATT+GGG + chr1_2:4405511-4405530 Msa0050500:intron 35.0%
!!! CTATTTTTACCACCACACTA+AGG - chr1_2:4405951-4405970 None:intergenic 35.0%
!!! AGCTAATATTTTGGGATACC+TGG + chr1_2:4405975-4405994 Msa0050500:intron 35.0%
TCATTCTTGTCTATGTTGCT+TGG + chr1_2:4406411-4406430 Msa0050500:CDS 35.0%
ATTATTTCAAGGAACTGAGG+AGG + chr1_2:4406453-4406472 Msa0050500:CDS 35.0%
TTATTTCAAGGAACTGAGGA+GGG + chr1_2:4406454-4406473 Msa0050500:CDS 35.0%
! TATGATGCATGGAAAGCTTT+TGG + chr1_2:4406524-4406543 Msa0050500:intron 35.0%
GGGAATAGGTAGTTTCAAAT+TGG + chr1_2:4406671-4406690 Msa0050500:intron 35.0%
! TGTTTGTTGATGTTGTTGCT+TGG + chr1_2:4406725-4406744 Msa0050500:intron 35.0%
CTATCTTTGTCTAACATGGT+TGG - chr1_2:4406809-4406828 None:intergenic 35.0%
CAACCATGTTAGACAAAGAT+AGG + chr1_2:4406807-4406826 Msa0050500:intron 35.0%
AGTCCTATCTTTGTCTAACA+TGG - chr1_2:4406813-4406832 None:intergenic 35.0%
TGTTAGACAAAGATAGGACT+TGG + chr1_2:4406813-4406832 Msa0050500:intron 35.0%
GCAGTTAGAGATGTTTAGTT+AGG + chr1_2:4406859-4406878 Msa0050500:intron 35.0%
! TTAAACTGCGCTCTATTTTG+AGG + chr1_2:4407012-4407031 Msa0050500:intron 35.0%
AAAGAGAAAATCTTCACGAG+TGG - chr1_2:4407085-4407104 None:intergenic 35.0%
!!! GTTCAGGTAGTTTTAGTACT+TGG + chr1_2:4407148-4407167 Msa0050500:intron 35.0%
!!! AGGTAGTTTTAGTACTTGGA+AGG + chr1_2:4407152-4407171 Msa0050500:intron 35.0%
! AAGGCTCTAATAGATCGATA+CGG - chr1_2:4407270-4407289 None:intergenic 35.0%
!!! AGGTCAATGAGATTTTGACT+GGG - chr1_2:4407305-4407324 None:intergenic 35.0%
CTAGTTTATTCTTCTCTGAG+AGG - chr1_2:4407325-4407344 None:intergenic 35.0%
ATAAAATAGACCTTGCAGCA+TGG - chr1_2:4407446-4407465 None:intergenic 35.0%
CAAAACCACAAGGTAAATCT+TGG - chr1_2:4407515-4407534 None:intergenic 35.0%
!! CTGATAGGTTTTATCAACCA+GGG - chr1_2:4407542-4407561 None:intergenic 35.0%
GAGATTCATCTTTAGCTGAT+AGG - chr1_2:4407557-4407576 None:intergenic 35.0%
AAAGTTGAAACCTCTTCAGT+TGG - chr1_2:4407579-4407598 None:intergenic 35.0%
GTTATATGAAGGACAATCAG+AGG - chr1_2:4407672-4407691 None:intergenic 35.0%
ATATGGCGGTTATATATGGT+AGG - chr1_2:4407785-4407804 None:intergenic 35.0%
ATAACTGTCATGGTCTGTAA+GGG - chr1_2:4407995-4408014 None:intergenic 35.0%
AATAACTGTCATGGTCTGTA+AGG - chr1_2:4407996-4408015 None:intergenic 35.0%
GTTGTTGTCACATAACTGAA+AGG + chr1_2:4408140-4408159 Msa0050500:intron 35.0%
AATAGCCTCGTGTAAAAAAC+AGG + chr1_2:4408183-4408202 Msa0050500:intron 35.0%
!!! CTTAACCTGTTTTTTACACG+AGG - chr1_2:4408191-4408210 None:intergenic 35.0%
CTCGTGTAAAAAACAGGTTA+AGG + chr1_2:4408189-4408208 Msa0050500:intron 35.0%
GTACAATACACCAAAATGGT+GGG + chr1_2:4408216-4408235 Msa0050500:intron 35.0%
!! TACTGATTGAGTTGAGAAGT+TGG + chr1_2:4408431-4408450 Msa0050500:intron 35.0%
TTCCAATGTGTTTCCAAACA+TGG + chr1_2:4408483-4408502 Msa0050500:intron 35.0%
CTTACATTCTATGCCATGTT+TGG - chr1_2:4408499-4408518 None:intergenic 35.0%
TTGTTGCACGACTAAAATTC+AGG - chr1_2:4408914-4408933 None:intergenic 35.0%
CAATGTTCCAGAGCAATATA+AGG - chr1_2:4409235-4409254 None:intergenic 35.0%
ATGGAGTTTGCATTTCAATC+AGG - chr1_2:4409309-4409328 None:intergenic 35.0%
CAAACTCCATTATACTTGGA+TGG + chr1_2:4409319-4409338 Msa0050500:CDS 35.0%
AAGAACGAAACGGAATTACG+CGG - chr1_2:4400140-4400159 None:intergenic 40.0%
TTATGGTTGAGAATGCGTGA+TGG - chr1_2:4400174-4400193 None:intergenic 40.0%
CTGATGATCGAATACATGTC+TGG + chr1_2:4400403-4400422 Msa0050500:intron 40.0%
!! ACTATGAAGCACTGACACAT+TGG - chr1_2:4400525-4400544 None:intergenic 40.0%
GTAGCAACAGTTTCTTGGTA+AGG - chr1_2:4400978-4400997 None:intergenic 40.0%
CTTCCTCCATAAGAATCCTT+CGG - chr1_2:4401200-4401219 None:intergenic 40.0%
CTGAAAGATGGACAAACTCT+AGG + chr1_2:4401274-4401293 Msa0050500:CDS 40.0%
TTTCCATTCCATCCTCAAGA+TGG + chr1_2:4401732-4401751 Msa0050500:intron 40.0%
TAACCATCTTGAGGATGGAA+TGG - chr1_2:4401738-4401757 None:intergenic 40.0%
! TCATTCATCTTCTAAGGGAG+GGG - chr1_2:4401800-4401819 None:intergenic 40.0%
! CTCATTCATCTTCTAAGGGA+GGG - chr1_2:4401801-4401820 None:intergenic 40.0%
! ACTCATTCATCTTCTAAGGG+AGG - chr1_2:4401802-4401821 None:intergenic 40.0%
GAAGTCGCAAAGCTAATAGT+AGG + chr1_2:4401960-4401979 Msa0050500:intron 40.0%
TAAAGCAGCTTTCAAGGTAG+AGG + chr1_2:4402188-4402207 Msa0050500:intron 40.0%
TGAAGGGAAAACAATGCTGA+TGG + chr1_2:4402430-4402449 Msa0050500:intron 40.0%
! TACCTTTTCCTTTCTTGTGC+AGG + chr1_2:4402675-4402694 Msa0050500:intron 40.0%
TTGACACTAAAGCTAAGGAG+TGG + chr1_2:4402800-4402819 Msa0050500:CDS 40.0%
GGATCAAGAAGGAGAAGAAA+AGG + chr1_2:4402900-4402919 Msa0050500:CDS 40.0%
! AGAATTGACGGATATGGGTA+TGG - chr1_2:4403030-4403049 None:intergenic 40.0%
CATGAAAAACTGCTCCAAGA+GGG - chr1_2:4403120-4403139 None:intergenic 40.0%
TCATGAAAAACTGCTCCAAG+AGG - chr1_2:4403121-4403140 None:intergenic 40.0%
CTGTTCCAGATCATACTATC+TGG + chr1_2:4403256-4403275 Msa0050500:intron 40.0%
TTCCAGATCATACTATCTGG+TGG + chr1_2:4403259-4403278 Msa0050500:intron 40.0%
TTCCACCAGATAGTATGATC+TGG - chr1_2:4403264-4403283 None:intergenic 40.0%
TCTGGTGGAAACTCAATGTT+AGG + chr1_2:4403274-4403293 Msa0050500:intron 40.0%
!!! TTTGGTTTTTTTCCCCTCCT+TGG + chr1_2:4403329-4403348 Msa0050500:intron 40.0%
GTTAAGAATAAGCCAAGGAG+GGG - chr1_2:4403344-4403363 None:intergenic 40.0%
TACAAGTAATCGAGCACCAA+AGG + chr1_2:4403537-4403556 Msa0050500:CDS 40.0%
!!! TTTTTTTGTGCAGGCTGGTA+TGG + chr1_2:4403761-4403780 Msa0050500:intron 40.0%
! AGATCATTGTGAGAAGGTGT+TGG + chr1_2:4403821-4403840 Msa0050500:CDS 40.0%
AGCACAAAGATCAGAAAACC+GGG + chr1_2:4403875-4403894 Msa0050500:CDS 40.0%
GTGACAGATTAATTCTCACC+CGG - chr1_2:4403896-4403915 None:intergenic 40.0%
GATGTCAGTATACTTCTCAG+TGG + chr1_2:4403941-4403960 Msa0050500:intron 40.0%
ATTATCAGCCATAGTAGCAG+TGG + chr1_2:4403973-4403992 Msa0050500:intron 40.0%
! ACTGCATTTGCAGTTTTGCT+TGG + chr1_2:4404063-4404082 Msa0050500:intron 40.0%
! TAGCTTAGGTTGTTTGCTCT+CGG + chr1_2:4404365-4404384 Msa0050500:intron 40.0%
! CGGCTTTGTATTACCTACAA+AGG + chr1_2:4404385-4404404 Msa0050500:intron 40.0%
!! GATTTCGCTTTTCCCTTTGT+AGG - chr1_2:4404401-4404420 None:intergenic 40.0%
GATGGTGAAAATGTGTGCAT+TGG + chr1_2:4404430-4404449 Msa0050500:intron 40.0%
! AATGTGTGCATTGGCAACTT+CGG + chr1_2:4404439-4404458 Msa0050500:intron 40.0%
!! GGAATGGGCTACATCAATTA+GGG - chr1_2:4404524-4404543 None:intergenic 40.0%
!! TGGAATGGGCTACATCAATT+AGG - chr1_2:4404525-4404544 None:intergenic 40.0%
ACAGTTGTGGCTCTTTAGTT+AGG + chr1_2:4404624-4404643 Msa0050500:intron 40.0%
!! ACATGGAAGTGTCCTCATTT+GGG - chr1_2:4404877-4404896 None:intergenic 40.0%
!! AACATGGAAGTGTCCTCATT+TGG - chr1_2:4404878-4404897 None:intergenic 40.0%
GAACTCAAGTCTCAAACGTA+TGG + chr1_2:4405056-4405075 Msa0050500:intron 40.0%
AAAAAATGGCAGGATGCAAC+AGG + chr1_2:4405153-4405172 Msa0050500:CDS 40.0%
GAACATCACTGAAATGGTGT+TGG - chr1_2:4405202-4405221 None:intergenic 40.0%
!! AGTGATGTTCGGAAGGTATT+AGG + chr1_2:4405212-4405231 Msa0050500:intron 40.0%
! TTTTTGTGACAGGACTCTTG+AGG + chr1_2:4405296-4405315 Msa0050500:intron 40.0%
!! GGAATAAAAATGGACTGAGG+AGG - chr1_2:4405500-4405519 None:intergenic 40.0%
!! AGGGGAATAAAAATGGACTG+AGG - chr1_2:4405503-4405522 None:intergenic 40.0%
ATGGATAGCATGTCTGTGTA+TGG - chr1_2:4405624-4405643 None:intergenic 40.0%
TTTGCCAGTGGTACTAAACT+AGG + chr1_2:4405767-4405786 Msa0050500:intron 40.0%
AATAGACTCATGCCTTAGTG+TGG + chr1_2:4405936-4405955 Msa0050500:intron 40.0%
AATCGAAACAGTTAGAGCGA+GGG - chr1_2:4406014-4406033 None:intergenic 40.0%
AAATCGAAACAGTTAGAGCG+AGG - chr1_2:4406015-4406034 None:intergenic 40.0%
!! CATTCTCTACTTTTCAGGCA+CGG + chr1_2:4406353-4406372 Msa0050500:intron 40.0%
! TTGTCTAACATGGTTGGTTG+AGG - chr1_2:4406803-4406822 None:intergenic 40.0%
AGACAAAGATAGGACTTGGA+AGG + chr1_2:4406817-4406836 Msa0050500:intron 40.0%
AGCACACAAACTCACAAATC+TGG + chr1_2:4406975-4406994 Msa0050500:intron 40.0%
CACAAACTCACAAATCTGGT+AGG + chr1_2:4406979-4406998 Msa0050500:intron 40.0%
AGTCTTGGGAATTTCATGAG+TGG - chr1_2:4407124-4407143 None:intergenic 40.0%
!! ATTCCCAAGACTTGTTGTTC+AGG + chr1_2:4407132-4407151 Msa0050500:intron 40.0%
CTACCTGAACAACAAGTCTT+GGG - chr1_2:4407138-4407157 None:intergenic 40.0%
ACTACCTGAACAACAAGTCT+TGG - chr1_2:4407139-4407158 None:intergenic 40.0%
! AGGCTCTAATAGATCGATAC+GGG - chr1_2:4407269-4407288 None:intergenic 40.0%
!!! GGTCAATGAGATTTTGACTG+GGG - chr1_2:4407304-4407323 None:intergenic 40.0%
!! GAGGTCAATGAGATTTTGAC+TGG - chr1_2:4407306-4407325 None:intergenic 40.0%
!! GCTGATAGGTTTTATCAACC+AGG - chr1_2:4407543-4407562 None:intergenic 40.0%
AGATGAATCTCCAACTGAAG+AGG + chr1_2:4407566-4407585 Msa0050500:intron 40.0%
TCTCTGTCGAAACAGATCAA+TGG + chr1_2:4407626-4407645 Msa0050500:intron 40.0%
CATGCAGTGTGGTTATATGA+AGG - chr1_2:4407683-4407702 None:intergenic 40.0%
TTGCATATTTGCATGCAGTG+TGG - chr1_2:4407694-4407713 None:intergenic 40.0%
TAATAGCATGATCCACAAGC+TGG + chr1_2:4407877-4407896 Msa0050500:intron 40.0%
! ATTGCATTTTTGCTTCCTCC+AGG + chr1_2:4407950-4407969 Msa0050500:intron 40.0%
! TTGCATTTTTGCTTCCTCCA+GGG + chr1_2:4407951-4407970 Msa0050500:intron 40.0%
! TCTAGAGTTTAGAGAATCCC+TGG - chr1_2:4407971-4407990 None:intergenic 40.0%
TAAAATATAAGGGGGAGCCT+TGG + chr1_2:4408105-4408124 Msa0050500:intron 40.0%
GTCACATAACTGAAAGGTCA+CGG + chr1_2:4408146-4408165 Msa0050500:intron 40.0%
TCACATAACTGAAAGGTCAC+GGG + chr1_2:4408147-4408166 Msa0050500:intron 40.0%
!! TTTTACACGAGGCTATTTCC+AGG - chr1_2:4408180-4408199 None:intergenic 40.0%
CTGCGTACAATACACCAAAA+TGG + chr1_2:4408212-4408231 Msa0050500:intron 40.0%
CGTACAATACACCAAAATGG+TGG + chr1_2:4408215-4408234 Msa0050500:intron 40.0%
CTATAAAAAAAAGGGGAGCC+CGG - chr1_2:4408282-4408301 None:intergenic 40.0%
AATTTACTTGGCAAGAAGGG+AGG + chr1_2:4408310-4408329 Msa0050500:intron 40.0%
ATTTACTTGGCAAGAAGGGA+GGG + chr1_2:4408311-4408330 Msa0050500:intron 40.0%
GCCCAAGATGATTGTAAAAG+TGG + chr1_2:4408405-4408424 Msa0050500:intron 40.0%
TGCCATGTTTGGAAACACAT+TGG - chr1_2:4408488-4408507 None:intergenic 40.0%
AAAGCAAATCTGTCAGTCAG+TGG - chr1_2:4408660-4408679 None:intergenic 40.0%
CTCTGTTTCAAACTGGAAAC+TGG - chr1_2:4408752-4408771 None:intergenic 40.0%
! CAGTTTCCAGTTTGAAACAG+AGG + chr1_2:4408750-4408769 Msa0050500:intron 40.0%
GCACGACTAAAATTCAGGAA+TGG - chr1_2:4408909-4408928 None:intergenic 40.0%
GAGGAAAAAGAGATGCTACA+GGG - chr1_2:4408976-4408995 None:intergenic 40.0%
TGAGGAAAAAGAGATGCTAC+AGG - chr1_2:4408977-4408996 None:intergenic 40.0%
CACCAGGTAGGAAACATATA+CGG - chr1_2:4409049-4409068 None:intergenic 40.0%
TATATGTTAAACTCGCCACC+AGG - chr1_2:4409065-4409084 None:intergenic 40.0%
CTGACTCCATCCAAGTATAA+TGG - chr1_2:4409328-4409347 None:intergenic 40.0%
!!! ATGTCCACCCTTATTTTCAG+AGG + chr1_2:4409350-4409369 Msa0050500:CDS 40.0%
!! GTGTTGTTTAGGATACCGTA+AGG - chr1_2:4409601-4409620 None:intergenic 40.0%
!! CATGCATTGCTGTGTTGTTT+AGG - chr1_2:4409612-4409631 None:intergenic 40.0%
! AATTCCCGTGACTTGTCAAA+CGG + chr1_2:4409730-4409749 Msa0050500:three_prime_UTR 40.0%
AGAACGAAACGGAATTACGC+GGG - chr1_2:4400139-4400158 None:intergenic 45.0%
TCGGTGCAGTAAGAACGAAA+CGG - chr1_2:4400150-4400169 None:intergenic 45.0%
!! GTTGAGAATGCGTGATGGAT+CGG - chr1_2:4400169-4400188 None:intergenic 45.0%
ATTCTCAACCATAACCGTCC+AGG + chr1_2:4400180-4400199 Msa0050500:CDS 45.0%
AAAGAGAAGAGGGATGAACC+TGG - chr1_2:4400201-4400220 None:intergenic 45.0%
!! ATGAAGCACTGACACATTGG+CGG - chr1_2:4400522-4400541 None:intergenic 45.0%
GCTCTGTAGCAACAGTTTCT+TGG - chr1_2:4400983-4401002 None:intergenic 45.0%
TGAGAAGCAGCAGAATGACA+AGG + chr1_2:4401221-4401240 Msa0050500:CDS 45.0%
AGCAGCAGAATGACAAGGAT+TGG + chr1_2:4401226-4401245 Msa0050500:CDS 45.0%
AGCAGAATGACAAGGATTGG+TGG + chr1_2:4401229-4401248 Msa0050500:CDS 45.0%
! ATGTAAAGTCCTTTGGGAGC+TGG - chr1_2:4401652-4401671 None:intergenic 45.0%
ATATATGGCAATGTGGGCAG+TGG + chr1_2:4401670-4401689 Msa0050500:intron 45.0%
!! CTCGCGTTTTGAATGCTGAA+GGG + chr1_2:4402414-4402433 Msa0050500:intron 45.0%
AAAAACTGCTCCAAGAGGGA+TGG - chr1_2:4403116-4403135 None:intergenic 45.0%
!! TGCATTTTGAGTCACTTCCC+TGG + chr1_2:4403168-4403187 Msa0050500:intron 45.0%
TGGAACAGAAGATATGGGTG+GGG - chr1_2:4403244-4403263 None:intergenic 45.0%
CTGGAACAGAAGATATGGGT+GGG - chr1_2:4403245-4403264 None:intergenic 45.0%
! TCTGGAACAGAAGATATGGG+TGG - chr1_2:4403246-4403265 None:intergenic 45.0%
CTAAGCAGATTGCTGAGTAG+TGG + chr1_2:4403499-4403518 Msa0050500:CDS 45.0%
AGCACCAAAGGACTTGAATG+AGG + chr1_2:4403549-4403568 Msa0050500:CDS 45.0%
CACACCTCATTCAAGTCCTT+TGG - chr1_2:4403556-4403575 None:intergenic 45.0%
! GTATGAGGCCCTTTTCCAAT+TGG - chr1_2:4403713-4403732 None:intergenic 45.0%
!! CATTGTGAGAAGGTGTTGGT+AGG + chr1_2:4403825-4403844 Msa0050500:CDS 45.0%
! ATGTGTGCATTGGCAACTTC+GGG + chr1_2:4404440-4404459 Msa0050500:intron 45.0%
AACTGGAAAGTCCCCAAATG+AGG + chr1_2:4404862-4404881 Msa0050500:intron 45.0%
!! CATGGAAGTGTCCTCATTTG+GGG - chr1_2:4404876-4404895 None:intergenic 45.0%
CTATCAGAATACGCTGTGCA+TGG - chr1_2:4405001-4405020 None:intergenic 45.0%
CCTTCCGAACATCACTGAAA+TGG - chr1_2:4405208-4405227 None:intergenic 45.0%
CCATTTCAGTGATGTTCGGA+AGG + chr1_2:4405205-4405224 Msa0050500:CDS 45.0%
TGACTATCTATGTGGTCGTC+CGG + chr1_2:4405356-4405375 Msa0050500:CDS 45.0%
ATTGTTTGGCCACGAGGAAA+TGG + chr1_2:4405446-4405465 Msa0050500:intron 45.0%
GGAAGGGAGGGAATTAAAAG+AGG + chr1_2:4405467-4405486 Msa0050500:intron 45.0%
ATTTGGAGGGGACAGAAGAT+GGG + chr1_2:4405536-4405555 Msa0050500:intron 45.0%
CAGTCCTAGTTTAGTACCAC+TGG - chr1_2:4405774-4405793 None:intergenic 45.0%
CAGTGGTACTAAACTAGGAC+TGG + chr1_2:4405772-4405791 Msa0050500:intron 45.0%
TGGGTCACTAGTCAAACCAA+TGG + chr1_2:4405824-4405843 Msa0050500:intron 45.0%
GGGTCACTAGTCAAACCAAT+GGG + chr1_2:4405825-4405844 Msa0050500:intron 45.0%
!!! GCACACTTTTTGACTTGGAG+AGG + chr1_2:4406476-4406495 Msa0050500:CDS 45.0%
! ATGCTTTGGATCTGCTGTAG+TGG + chr1_2:4406561-4406580 Msa0050500:intron 45.0%
CAAGCATCAGAATCAACCAC+TGG - chr1_2:4406636-4406655 None:intergenic 45.0%
!! TGCTTGTTATGCCTTGTAGC+TGG + chr1_2:4406650-4406669 Msa0050500:intron 45.0%
!! GCTTGTTATGCCTTGTAGCT+GGG + chr1_2:4406651-4406670 Msa0050500:intron 45.0%
TATGCCTTGTAGCTGGGAAT+AGG + chr1_2:4406657-4406676 Msa0050500:intron 45.0%
ACTACCTATTCCCAGCTACA+AGG - chr1_2:4406664-4406683 None:intergenic 45.0%
GCTCTAATAGATCGATACGG+GGG - chr1_2:4407267-4407286 None:intergenic 45.0%
! GGCTCTAATAGATCGATACG+GGG - chr1_2:4407268-4407287 None:intergenic 45.0%
TCGTCCCAAGATTTACCTTG+TGG + chr1_2:4407507-4407526 Msa0050500:intron 45.0%
GAAGGACAATCAGAGGATGA+AGG - chr1_2:4407665-4407684 None:intergenic 45.0%
GTGTATCTGAGCCACAGTTT+AGG + chr1_2:4407848-4407867 Msa0050500:intron 45.0%
AGAGTTTAGAGAATCCCTGG+AGG - chr1_2:4407968-4407987 None:intergenic 45.0%
CTTCAGCCTCTGTTTCAAAC+TGG - chr1_2:4408759-4408778 None:intergenic 45.0%
! CAGTTTGAAACAGAGGCTGA+AGG + chr1_2:4408757-4408776 Msa0050500:CDS 45.0%
! TTTGAAACAGAGGCTGAAGG+CGG + chr1_2:4408760-4408779 Msa0050500:CDS 45.0%
TATGGATGTGATGCCAACAG+GGG - chr1_2:4408836-4408855 None:intergenic 45.0%
GTATGGATGTGATGCCAACA+GGG - chr1_2:4408837-4408856 None:intergenic 45.0%
AGTATGGATGTGATGCCAAC+AGG - chr1_2:4408838-4408857 None:intergenic 45.0%
GGCATCACATCCATACTATC+TGG + chr1_2:4408841-4408860 Msa0050500:CDS 45.0%
CACATCCATACTATCTGGTC+AGG + chr1_2:4408846-4408865 Msa0050500:CDS 45.0%
CTCTTCCTGACCAGATAGTA+TGG - chr1_2:4408854-4408873 None:intergenic 45.0%
CAACTACAGTACTTGCAGTG+AGG - chr1_2:4408995-4409014 None:intergenic 45.0%
CTCCGTATATGTTTCCTACC+TGG + chr1_2:4409044-4409063 Msa0050500:intron 45.0%
CGTATATGTTTCCTACCTGG+TGG + chr1_2:4409047-4409066 Msa0050500:intron 45.0%
! GTTGCCTCTGAAAATAAGGG+TGG - chr1_2:4409357-4409376 None:intergenic 45.0%
ACACACCGTTTGACAAGTCA+CGG - chr1_2:4409738-4409757 None:intergenic 45.0%
!!! TAATTTACTTTTTTTTAATT+TGG + chr1_2:4402215-4402234 Msa0050500:intron 5.0%
!! AATATATTCAAATTATTATT+GGG - chr1_2:4404183-4404202 None:intergenic 5.0%
!! AAATATATTCAAATTATTAT+TGG - chr1_2:4404184-4404203 None:intergenic 5.0%
AAACGGAATTACGCGGGAGT+TGG - chr1_2:4400133-4400152 None:intergenic 50.0%
AGAAGAGGGATGAACCTGGA+CGG - chr1_2:4400197-4400216 None:intergenic 50.0%
CACATGTGTCTGTGCAGAGT+TGG - chr1_2:4400432-4400451 None:intergenic 50.0%
!! TGAGCGCCGAAGGATTCTTA+TGG + chr1_2:4401191-4401210 Msa0050500:CDS 50.0%
CAGGAAAAGACCGGAGAATG+TGG + chr1_2:4401543-4401562 Msa0050500:intron 50.0%
TGGATCCAGGGGTAGGAAAA+TGG + chr1_2:4401563-4401582 Msa0050500:CDS 50.0%
GGATCCAGGGGTAGGAAAAT+GGG + chr1_2:4401564-4401583 Msa0050500:CDS 50.0%
! TAAAGTCCTTTGGGAGCTGG+AGG - chr1_2:4401649-4401668 None:intergenic 50.0%
!! GCTCGCGTTTTGAATGCTGA+AGG + chr1_2:4402413-4402432 Msa0050500:intron 50.0%
GGCCTGCACAAGAAAGGAAA+AGG - chr1_2:4402680-4402699 None:intergenic 50.0%
GAAGAGAAGCCTTTGCAGTC+AGG + chr1_2:4402748-4402767 Msa0050500:CDS 50.0%
CTTGCAATGCCTGACTGCAA+AGG - chr1_2:4402760-4402779 None:intergenic 50.0%
! TGCAGTCAGGCATTGCAAGT+TGG + chr1_2:4402761-4402780 Msa0050500:CDS 50.0%
CAGGATGCAACAGGCAGATT+TGG + chr1_2:4405162-4405181 Msa0050500:CDS 50.0%
GATGCAACAGGCAGATTTGG+AGG + chr1_2:4405165-4405184 Msa0050500:CDS 50.0%
CTCGTGGCCAAACAATATGC+TGG - chr1_2:4405442-4405461 None:intergenic 50.0%
CAGCATATTGTTTGGCCACG+AGG + chr1_2:4405440-4405459 Msa0050500:intron 50.0%
TTTGGCCACGAGGAAATGGA+AGG + chr1_2:4405450-4405469 Msa0050500:intron 50.0%
TTGGCCACGAGGAAATGGAA+GGG + chr1_2:4405451-4405470 Msa0050500:intron 50.0%
CAAATCGCCCAATGACAGAG+GGG - chr1_2:4405521-4405540 None:intergenic 50.0%
CCAAATCGCCCAATGACAGA+GGG - chr1_2:4405522-4405541 None:intergenic 50.0%
TCCAAATCGCCCAATGACAG+AGG - chr1_2:4405523-4405542 None:intergenic 50.0%
! TCTGTCATTGGGCGATTTGG+AGG + chr1_2:4405522-4405541 Msa0050500:intron 50.0%
! CTGTCATTGGGCGATTTGGA+GGG + chr1_2:4405523-4405542 Msa0050500:intron 50.0%
! TGTCATTGGGCGATTTGGAG+GGG + chr1_2:4405524-4405543 Msa0050500:intron 50.0%
GATTTGGAGGGGACAGAAGA+TGG + chr1_2:4405535-4405554 Msa0050500:intron 50.0%
GCGGCAGTGACTAGAAAGAA+TGG - chr1_2:4405643-4405662 None:intergenic 50.0%
AGTGGAGACAGATCCTTCGT+CGG - chr1_2:4405672-4405691 None:intergenic 50.0%
! ACTAGGACTGGTACTCGAGT+CGG + chr1_2:4405784-4405803 Msa0050500:intron 50.0%
!! GGTCAGGGTACTGGATTGAT+GGG + chr1_2:4405805-4405824 Msa0050500:intron 50.0%
TGGCTCAACGAGTAACCCAT+TGG - chr1_2:4405843-4405862 None:intergenic 50.0%
AGACTCATGCCTTAGTGTGG+TGG + chr1_2:4405939-4405958 Msa0050500:intron 50.0%
GAGGGAGAGATCTTACTTCC+AGG - chr1_2:4405996-4406015 None:intergenic 50.0%
!! GGAGGGCACACTTTTTGACT+TGG + chr1_2:4406471-4406490 Msa0050500:CDS 50.0%
! GACTGGGGATAAGTTGACGA+AGG - chr1_2:4407289-4407308 None:intergenic 50.0%
AGTCAAGGTGAGACTTGACC+CGG - chr1_2:4407377-4407396 None:intergenic 50.0%
CCAGGGTCAACAAAACCACA+AGG - chr1_2:4407525-4407544 None:intergenic 50.0%
!!! CCTTGTGGTTTTGTTGACCC+TGG + chr1_2:4407522-4407541 Msa0050500:intron 50.0%
GAAGAATACGAGCCAGCTTG+TGG - chr1_2:4407892-4407911 None:intergenic 50.0%
ACAACTTTACCGTTGCGCCA+AGG - chr1_2:4408125-4408144 None:intergenic 50.0%
! AGAAAGGGGTCCCACCATTT+TGG - chr1_2:4408229-4408248 None:intergenic 50.0%
CATACGCAGGGTACAGAAAG+GGG - chr1_2:4408243-4408262 None:intergenic 50.0%
GCATACGCAGGGTACAGAAA+GGG - chr1_2:4408244-4408263 None:intergenic 50.0%
CTTTCTGTACCCTGCGTATG+CGG + chr1_2:4408243-4408262 Msa0050500:intron 50.0%
TTTCTGTACCCTGCGTATGC+GGG + chr1_2:4408244-4408263 Msa0050500:intron 50.0%
! GAGCCTCCTCACTCTTGTTT+CGG + chr1_2:4408724-4408743 Msa0050500:intron 50.0%
GAACCGAAACAAGAGTGAGG+AGG - chr1_2:4408730-4408749 None:intergenic 50.0%
CTGGAACCGAAACAAGAGTG+AGG - chr1_2:4408733-4408752 None:intergenic 50.0%
TTGAAACAGAGGCTGAAGGC+GGG + chr1_2:4408761-4408780 Msa0050500:CDS 50.0%
TGCCTTCTGCTAAGACATCG+CGG - chr1_2:4408795-4408814 None:intergenic 50.0%
TGTCTTAGCAGAAGGCAACG+TGG + chr1_2:4408798-4408817 Msa0050500:CDS 50.0%
GTCTTAGCAGAAGGCAACGT+GGG + chr1_2:4408799-4408818 Msa0050500:CDS 50.0%
TGTTAAACTCGCCACCAGGT+AGG - chr1_2:4409061-4409080 None:intergenic 50.0%
CACACCGTTTGACAAGTCAC+GGG - chr1_2:4409737-4409756 None:intergenic 50.0%
CGGGAGTTGGAGGTTGAGAT+TGG - chr1_2:4400120-4400139 None:intergenic 55.0%
GGGATGAACCTGGACGGTTA+TGG - chr1_2:4400191-4400210 None:intergenic 55.0%
CTGACGTGTCAGTGCCATGT+TGG + chr1_2:4400493-4400512 Msa0050500:intron 55.0%
! CACATTGGCGGACACCAACA+TGG - chr1_2:4400510-4400529 None:intergenic 55.0%
!! ATAGGGAGAATGAGCGCCGA+AGG + chr1_2:4401181-4401200 Msa0050500:CDS 55.0%
GCGCCGAAGGATTCTTATGG+AGG + chr1_2:4401194-4401213 Msa0050500:CDS 55.0%
AGACCGGAGAATGTGGATCC+AGG + chr1_2:4401550-4401569 Msa0050500:CDS 55.0%
GACCGGAGAATGTGGATCCA+GGG + chr1_2:4401551-4401570 Msa0050500:CDS 55.0%
ACCGGAGAATGTGGATCCAG+GGG + chr1_2:4401552-4401571 Msa0050500:CDS 55.0%
ACCCCTGGATCCACATTCTC+CGG - chr1_2:4401556-4401575 None:intergenic 55.0%
GAGAATGTGGATCCAGGGGT+AGG + chr1_2:4401556-4401575 Msa0050500:CDS 55.0%
! GAGACCCATTTTCCTACCCC+TGG - chr1_2:4401571-4401590 None:intergenic 55.0%
CAGCATGGCCTGCACAAGAA+AGG - chr1_2:4402686-4402705 None:intergenic 55.0%
ATGGGCACATCCATCCCTCT+TGG + chr1_2:4403103-4403122 Msa0050500:intron 55.0%
ATTGGCAACTTCGGGACACG+TGG + chr1_2:4404448-4404467 Msa0050500:intron 55.0%
TGAGGTTCCTGAAAGCTGCG+AGG + chr1_2:4405314-4405333 Msa0050500:CDS 55.0%
GAGGTTCCTGAAAGCTGCGA+GGG + chr1_2:4405315-4405334 Msa0050500:CDS 55.0%
CCACGAGGAAATGGAAGGGA+GGG + chr1_2:4405455-4405474 Msa0050500:intron 55.0%
CCCTCTGTCATTGGGCGATT+TGG + chr1_2:4405519-4405538 Msa0050500:intron 55.0%
ACAGATCCTTCGTCGGACAG+TGG - chr1_2:4405665-4405684 None:intergenic 55.0%
ACTGGTACTCGAGTCGGTCA+GGG + chr1_2:4405790-4405809 Msa0050500:intron 55.0%
!! CGGTCAGGGTACTGGATTGA+TGG + chr1_2:4405804-4405823 Msa0050500:intron 55.0%
CGAATGCGCATGCTCATCAC+TGG - chr1_2:4406105-4406124 None:intergenic 55.0%
GAGCATGCGCATTCGTGACA+AGG + chr1_2:4406110-4406129 Msa0050500:CDS 55.0%
CCTTGCAGCATGGATCACCA+AGG - chr1_2:4407436-4407455 None:intergenic 55.0%
! CCTTGGTGATCCATGCTGCA+AGG + chr1_2:4407433-4407452 Msa0050500:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + chr1_2:4408159-4408178 Msa0050500:intron 55.0%
CGCATACGCAGGGTACAGAA+AGG - chr1_2:4408245-4408264 None:intergenic 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr1_2:4408255-4408274 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - chr1_2:4408256-4408275 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG + chr1_2:4408260-4408279 Msa0050500:intron 55.0%
CGGAATTACGCGGGAGTTGG+AGG - chr1_2:4400130-4400149 None:intergenic 60.0%
GAGCTGGAGGAGCAGTTGGA+CGG - chr1_2:4401636-4401655 None:intergenic 60.0%
TTGGGAGCTGGAGGAGCAGT+TGG - chr1_2:4401640-4401659 None:intergenic 60.0%
ACTGCTCCTCCAGCTCCCAA+AGG + chr1_2:4401640-4401659 Msa0050500:intron 60.0%
GCAACTCCCTCGCAGCTTTC+AGG - chr1_2:4405324-4405343 None:intergenic 60.0%
GCCACGAGGAAATGGAAGGG+AGG + chr1_2:4405454-4405473 Msa0050500:intron 60.0%
CCCTCCCTTCCATTTCCTCG+TGG - chr1_2:4405458-4405477 None:intergenic 60.0%
GATCCTTCGTCGGACAGTGG+CGG - chr1_2:4405662-4405681 None:intergenic 60.0%
GACTGGTACTCGAGTCGGTC+AGG + chr1_2:4405789-4405808 Msa0050500:intron 60.0%
ACTCGAGTCGGTCAGGGTAC+TGG + chr1_2:4405796-4405815 Msa0050500:intron 60.0%
CTCCCTGCGTGCATAGAGAC+CGG + chr1_2:4407355-4407374 Msa0050500:intron 60.0%
TCCCTGCGTGCATAGAGACC+GGG + chr1_2:4407356-4407375 Msa0050500:intron 60.0%
ACCCGGTCTCTATGCACGCA+GGG - chr1_2:4407360-4407379 None:intergenic 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG + chr1_2:4408261-4408280 Msa0050500:intron 60.0%
CGCCGCGATGTCTTAGCAGA+AGG + chr1_2:4408790-4408809 Msa0050500:CDS 60.0%
CGGTCTCTATGCACGCAGGG+AGG - chr1_2:4407357-4407376 None:intergenic 65.0%
GACCCGGTCTCTATGCACGC+AGG - chr1_2:4407361-4407380 None:intergenic 65.0%
AAGGGGGAGCCTTGGCGCAA+CGG + chr1_2:4408113-4408132 Msa0050500:intron 65.0%
GCAGAAGGCAACGTGGGCTC+AGG + chr1_2:4408805-4408824 Msa0050500:CDS 65.0%
GAAGGCAACGTGGGCTCAGG+AGG + chr1_2:4408808-4408827 Msa0050500:CDS 65.0%
!! GGCTCAGGAGGTACCCCTGT+TGG + chr1_2:4408820-4408839 Msa0050500:CDS 65.0%
CTGCCGCCACTGTCCGACGA+AGG + chr1_2:4405656-4405675 Msa0050500:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 4399944 4409814 4399944 ID=Msa0050500;Name=Msa0050500
chr1_2 mRNA 4399944 4409814 4399944 ID=Msa0050500-mRNA-1;Parent=Msa0050500;Name=Msa0050500-mRNA-1;_AED=0.12;_eAED=0.12;_QI=113|0.84|0.85|1|0.92|1|14|382|564
chr1_2 exon 4399944 4400201 4399944 ID=Msa0050500-mRNA-1:exon:1142;Parent=Msa0050500-mRNA-1
chr1_2 exon 4401000 4401058 4401000 ID=Msa0050500-mRNA-1:exon:1143;Parent=Msa0050500-mRNA-1
chr1_2 exon 4401156 4401295 4401156 ID=Msa0050500-mRNA-1:exon:1144;Parent=Msa0050500-mRNA-1
chr1_2 exon 4401546 4401634 4401546 ID=Msa0050500-mRNA-1:exon:1145;Parent=Msa0050500-mRNA-1
chr1_2 exon 4402435 4402514 4402435 ID=Msa0050500-mRNA-1:exon:1146;Parent=Msa0050500-mRNA-1
chr1_2 exon 4402697 4402954 4402697 ID=Msa0050500-mRNA-1:exon:1147;Parent=Msa0050500-mRNA-1
chr1_2 exon 4403460 4403570 4403460 ID=Msa0050500-mRNA-1:exon:1148;Parent=Msa0050500-mRNA-1
chr1_2 exon 4403774 4403896 4403774 ID=Msa0050500-mRNA-1:exon:1149;Parent=Msa0050500-mRNA-1
chr1_2 exon 4405105 4405226 4405105 ID=Msa0050500-mRNA-1:exon:1150;Parent=Msa0050500-mRNA-1
chr1_2 exon 4405308 4405377 4405308 ID=Msa0050500-mRNA-1:exon:1151;Parent=Msa0050500-mRNA-1
chr1_2 exon 4406039 4406131 4406039 ID=Msa0050500-mRNA-1:exon:1152;Parent=Msa0050500-mRNA-1
chr1_2 exon 4406370 4406497 4406370 ID=Msa0050500-mRNA-1:exon:1153;Parent=Msa0050500-mRNA-1
chr1_2 exon 4408753 4408894 4408753 ID=Msa0050500-mRNA-1:exon:1154;Parent=Msa0050500-mRNA-1
chr1_2 exon 4409298 4409814 4409298 ID=Msa0050500-mRNA-1:exon:1155;Parent=Msa0050500-mRNA-1
chr1_2 five_prime_UTR 4399944 4400056 4399944 ID=Msa0050500-mRNA-1:five_prime_utr;Parent=Msa0050500-mRNA-1
chr1_2 CDS 4400057 4400201 4400057 ID=Msa0050500-mRNA-1:cds;Parent=Msa0050500-mRNA-1
chr1_2 CDS 4401000 4401058 4401000 ID=Msa0050500-mRNA-1:cds;Parent=Msa0050500-mRNA-1
chr1_2 CDS 4401156 4401295 4401156 ID=Msa0050500-mRNA-1:cds;Parent=Msa0050500-mRNA-1
chr1_2 CDS 4401546 4401634 4401546 ID=Msa0050500-mRNA-1:cds;Parent=Msa0050500-mRNA-1
chr1_2 CDS 4402435 4402514 4402435 ID=Msa0050500-mRNA-1:cds;Parent=Msa0050500-mRNA-1
chr1_2 CDS 4402697 4402954 4402697 ID=Msa0050500-mRNA-1:cds;Parent=Msa0050500-mRNA-1
chr1_2 CDS 4403460 4403570 4403460 ID=Msa0050500-mRNA-1:cds;Parent=Msa0050500-mRNA-1
chr1_2 CDS 4403774 4403896 4403774 ID=Msa0050500-mRNA-1:cds;Parent=Msa0050500-mRNA-1
chr1_2 CDS 4405105 4405226 4405105 ID=Msa0050500-mRNA-1:cds;Parent=Msa0050500-mRNA-1
chr1_2 CDS 4405308 4405377 4405308 ID=Msa0050500-mRNA-1:cds;Parent=Msa0050500-mRNA-1
chr1_2 CDS 4406039 4406131 4406039 ID=Msa0050500-mRNA-1:cds;Parent=Msa0050500-mRNA-1
chr1_2 CDS 4406370 4406497 4406370 ID=Msa0050500-mRNA-1:cds;Parent=Msa0050500-mRNA-1
chr1_2 CDS 4408753 4408894 4408753 ID=Msa0050500-mRNA-1:cds;Parent=Msa0050500-mRNA-1
chr1_2 CDS 4409298 4409432 4409298 ID=Msa0050500-mRNA-1:cds;Parent=Msa0050500-mRNA-1
chr1_2 three_prime_UTR 4409433 4409814 4409433 ID=Msa0050500-mRNA-1:three_prime_utr;Parent=Msa0050500-mRNA-1
Gene Sequence

>Msa0050500

ATGAGAAGTAGAATCTGGAATCTTCTCTGCAACAAAAACAAACTCATCCAATTCACATTTCCAATCTCAACCTCCAACTCCCGCGTAATTCCGTTTCGTTCTTACTGCACCGATCCATCACGCATTCTCAACCATAACCGTCCAGAGCTTCAGAATTTGTTATCAAGGTTGGAGAATTATGAGAGAGAAATGGAAGAGTATCATGTTAATCTATCTAATTGGGAGAAAAATAGGGAGAATGAGCGCCGAAGGATTCTTATGGAGGAAGTTGAGAAGCAGCAGAATGACAAGGATTGGTGGAAGCGCTTGAATAATAAAATCACTGAAAGATGGACAAACTCTAGGAAAAGACCGGAGAATGTGGATCCAGGGGTAGGAAAATGGGTCTCTTATCTTAAACGTGAGAAGAAGTTGGATTCAGTAGTTGGTCGCCGGAAAACAATGCTGATGGACATGTTTTATAGTGCTACTGAAGGAATAGTTAAACATCGAAGAAGGTATCACTTTCATGAGGCCATGCTGAGAATAAATGAACATATGCACAAGACATGGAAGAAACAAATGGAAGAGAAGCCTTTGCAGTCAGGCATTGCAAGTTGGATTATGAATCTTCCATTTGACACTAAAGCTAAGGAGTGGTTAGCTGCAGAAGAAAGATACAAGAAAGAGGTGCAGATGAAACACATTCTTCCAGATGTAGCAGATAAGTTTTTTCTGGATCAAGAAGGAGAAGAAAAGGGAGCTAGCATTTTGTGCTTTGATGAGATACAGACTGTTGATGTATTTGCTATTGTGGCTTTATCTGGAATTCTAAGCAGATTGCTGAGTAGTGGAACTATTATTGTGGCTACAAGTAATCGAGCACCAAAGGACTTGAATGAGGCTGGTATGGTACCAGAATTCTTCCAAAACCTTCTTTCTAATTTGGAAGATCATTGTGAGAAGGTGTTGGTAGGCAGTGAAATTGACTACCGTCGTTTTATAGCACAAAGATCAGAAAACCGGGTAAACTATTTATGCCCTATTGAAAGGGAAACCATCAATGAATTTGAGAAAAAATGGCAGGATGCAACAGGCAGATTTGGAGGAAAAATAATCTCCAACACCATTTCAGTGATGTTCGGAAGGACTCTTGAGGTTCCTGAAAGCTGCGAGGGAGTTGCCCGCTTTACATTTGACTATCTATGTGGTCGTCCGTTGGGTGCAGCAGATTATATTGCAGTAGCTGAAAACTATCACACCGTTTTCATATCTGATATTCCAGTGATGAGCATGCGCATTCGTGACAAGGCACGGAGATTTATCACTCTTATTGACGAATTATACAATCATCATTCTTGTCTATGTTGCTTGGCATCTTCTTCAATTGATGAATTATTTCAAGGAACTGAGGAGGGCACACTTTTTGACTTGGAGAGTTTCCAGTTTGAAACAGAGGCTGAAGGCGGGAAACTTCGCCGCGATGTCTTAGCAGAAGGCAACGTGGGCTCAGGAGGTACCCCTGTTGGCATCACATCCATACTATCTGGTCAGGAAGAGCTGTTTACTTTTCAGAGAGCTGTGTCGCGCCTGATTGAAATGCAAACTCCATTATACTTGGATGGAGTCAGTAATGTCCACCCTTATTTTCAGAGGCAACATAAAACATTTCAAAAAAATCACGACAACTTATTGTCTGAGTCATCATCAATTTGA
Protein sequence

>Msa0050500

MRSRIWNLLCNKNKLIQFTFPISTSNSRVIPFRSYCTDPSRILNHNRPELQNLLSRLENYEREMEEYHVNLSNWEKNRENERRRILMEEVEKQQNDKDWWKRLNNKITERWTNSRKRPENVDPGVGKWVSYLKREKKLDSVVGRRKTMLMDMFYSATEGIVKHRRRYHFHEAMLRINEHMHKTWKKQMEEKPLQSGIASWIMNLPFDTKAKEWLAAEERYKKEVQMKHILPDVADKFFLDQEGEEKGASILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPKDLNEAGMVPEFFQNLLSNLEDHCEKVLVGSEIDYRRFIAQRSENRVNYLCPIERETINEFEKKWQDATGRFGGKIISNTISVMFGRTLEVPESCEGVARFTFDYLCGRPLGAADYIAVAENYHTVFISDIPVMSMRIRDKARRFITLIDELYNHHSCLCCLASSSIDELFQGTEEGTLFDLESFQFETEAEGGKLRRDVLAEGNVGSGGTPVGITSILSGQEELFTFQRAVSRLIEMQTPLYLDGVSNVHPYFQRQHKTFQKNHDNLLSESSSI*