AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0230980


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0230980 MtrunA17_Chr2g0277211 89.868 227 16 2 1 224 1 223 8.61e-143 397
Msa0230980 MtrunA17_Chr2g0298061 74.510 153 39 0 72 224 89 241 1.57e-77 233
Msa0230980 MtrunA17_Chr7g0270231 43.312 157 83 3 68 223 63 214 8.32e-31 112
Msa0230980 MtrunA17_Chr8g0352991 58.904 73 30 0 68 140 63 135 2.06e-23 92.0
Msa0230980 MtrunA17_Chr1g0182901 46.667 60 30 1 86 143 200 259 2.56e-11 61.6
Msa0230980 MtrunA17_Chr3g0115091 46.667 60 30 1 86 143 198 257 2.65e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0230980 AT5G49940.1 80.000 175 35 0 50 224 61 235 1.42e-98 286
Msa0230980 AT4G25910.1 61.364 220 70 4 6 224 30 235 9.45e-81 241
Msa0230980 AT5G49940.2 78.947 114 24 0 50 163 61 174 7.52e-60 186
Msa0230980 AT4G01940.1 36.813 182 107 4 38 213 44 223 5.76e-29 108

Find 104 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACGAGGTTGTTTGTATATT+TGG 0.134296 2_2:+3184978 Msa0230980:three_prime_UTR
GGTTCGACTGCGACTATTTC+AGG 0.155822 2_2:-3182238 None:intergenic
GTTCAGCTGCTATGATATTT+TGG 0.179960 2_2:+3184399 Msa0230980:exon
TTCTGTTATGACAATGAAAA+TGG 0.180204 2_2:+3182186 Msa0230980:CDS
GGCAATTCCACAGCTGAATT+TGG 0.194360 2_2:-3182022 None:intergenic
TTCCATTAGTGACAACATTA+TGG 0.253619 2_2:-3184761 None:intergenic
GGGCATTGAGCGTCGATTAA+TGG 0.258243 2_2:+3182207 Msa0230980:CDS
ATTGCTAGTACGGGGTTTAA+AGG 0.285870 2_2:+3184956 Msa0230980:three_prime_UTR
TTCAGGTTCTAGAGGAATTA+AGG 0.293515 2_2:+3184220 Msa0230980:intron
GTGCGATTGGCGATGGTGTT+TGG 0.299431 2_2:+3180449 Msa0230980:five_prime_UTR
CTCCATAATGTTGTCACTAA+TGG 0.304944 2_2:+3184759 Msa0230980:three_prime_UTR
TGTTGTACGGTTGAAGTTAC+AGG 0.305471 2_2:+3182141 Msa0230980:CDS
GACTTTGACTGTAATAATAA+TGG 0.311031 2_2:-3184554 None:intergenic
AATTGTATCGGAATGAGATT+TGG 0.323240 2_2:+3184893 Msa0230980:three_prime_UTR
TGCGATTGGCGATGGTGTTT+GGG 0.323776 2_2:+3180450 Msa0230980:five_prime_UTR
TTATGTTTGTACAGCTATAA+AGG 0.329155 2_2:+3181988 Msa0230980:intron
TTCTTCCATCACCCTCAAAA+AGG 0.340435 2_2:+3180736 Msa0230980:CDS
TAAGCAATTTAAAATGTTGT+AGG 0.369306 2_2:+3185069 Msa0230980:three_prime_UTR
GTGATTCGGACCTTTACTAT+TGG 0.387716 2_2:-3184297 None:intergenic
CCGGTTTCTTCATCAGTTAC+CGG 0.393466 2_2:-3182259 None:intergenic
CCGTACCTGGTAGGGGCAGC+TGG 0.401375 2_2:+3184243 Msa0230980:CDS
AAATCACGATTACAACATAA+TGG 0.407527 2_2:-3184608 None:intergenic
TCCTTTCATACACGTCCGTT+TGG 0.412463 2_2:+3180908 Msa0230980:CDS
TGAAATAGTCGCAGTCGAAC+CGG 0.432530 2_2:+3182240 Msa0230980:CDS
GTTTGGGTGGGTGACGTGAC+TGG 0.432906 2_2:+3180466 Msa0230980:five_prime_UTR
AAAGAAAAGAAAGGAAGAAA+CGG 0.439770 2_2:+3180410 None:intergenic
TCTTGAATTGGTAGCAATTG+AGG 0.443279 2_2:+3184272 Msa0230980:CDS
TCTTTGTTGTTGCAGGGCAC+TGG 0.448241 2_2:+3180827 Msa0230980:intron
TCGTGATATTATTGCTAGTA+CGG 0.450284 2_2:+3184946 Msa0230980:three_prime_UTR
AGCTGAACTGCTGCTATGGC+AGG 0.451914 2_2:-3184384 None:intergenic
AGCTGGTGGAACTCTTGAAT+TGG 0.456731 2_2:+3184260 Msa0230980:CDS
AAACTGTGTTGGATGAAATT+CGG 0.457743 2_2:+3182065 Msa0230980:CDS
CGTGATATTATTGCTAGTAC+GGG 0.458389 2_2:+3184947 Msa0230980:three_prime_UTR
CTTATGTTGCACTTGAGCTT+AGG 0.464636 2_2:+3185003 Msa0230980:three_prime_UTR
CGGCAGCTGGACCTGTGATT+CGG 0.465355 2_2:-3184311 None:intergenic
AAGCAATTTAAAATGTTGTA+GGG 0.473646 2_2:+3185070 Msa0230980:three_prime_UTR
GAAAGGAAGAAACGGAACTT+TGG 0.478743 2_2:+3180418 Msa0230980:five_prime_UTR
ATAGTAAAGGTCCGAATCAC+AGG 0.485942 2_2:+3184300 Msa0230980:CDS
GGGTGGTGTGCGATTGGCGA+TGG 0.487578 2_2:+3180442 Msa0230980:five_prime_UTR
GACATTATACTATTATAGTC+AGG 0.489661 2_2:-3184652 None:intergenic
TGGAGTGTCAAAACTATTTG+TGG 0.490292 2_2:+3184919 Msa0230980:three_prime_UTR
TAGCAGCTGAACTGCTGCTA+TGG 0.490395 2_2:-3184388 None:intergenic
GCACCACCACACCTTGCATC+GGG 0.494394 2_2:-3180667 None:intergenic
TTCATCATTTAGCTCGAGAC+CGG 0.495683 2_2:-3182278 None:intergenic
TCTGTTATGACAATGAAAAT+GGG 0.498234 2_2:+3182187 Msa0230980:CDS
AAAGGCCGAAAAGAAAAGAA+AGG 0.502595 2_2:+3180401 None:intergenic
ATCGGAATGAGATTTGGAAA+TGG 0.503286 2_2:+3184899 Msa0230980:three_prime_UTR
AGAAGAAGAAGAAGGTTGAA+GGG 0.503550 2_2:-3180717 None:intergenic
TTCCACCAGCTGCCCCTACC+AGG 0.506704 2_2:-3184248 None:intergenic
TTTGGTGGGTGGTGTGCGAT+TGG 0.509056 2_2:+3180436 Msa0230980:five_prime_UTR
ACAGTCATGACACCGGCAGC+TGG 0.515392 2_2:-3184324 None:intergenic
TTGAAGTTACAGGGTGCCTG+TGG 0.517377 2_2:+3182151 Msa0230980:CDS
AATTAAGGCCGTACCTGGTA+GGG 0.517939 2_2:+3184235 Msa0230980:CDS
AGCTGAATTTGGAGTGGCAA+CGG 0.519177 2_2:-3182011 None:intergenic
ATTGGCGATGGTGTTTGGGT+GGG 0.519192 2_2:+3180454 Msa0230980:five_prime_UTR
CGAATCACAGGTCCAGCTGC+CGG 0.519813 2_2:+3184312 Msa0230980:CDS
GATTGGCGATGGTGTTTGGG+TGG 0.521943 2_2:+3180453 Msa0230980:five_prime_UTR
AGCACCACCACACCTTGCAT+CGG 0.529473 2_2:-3180668 None:intergenic
GTTCGACTGCGACTATTTCA+GGG 0.533343 2_2:-3182237 None:intergenic
TTCATTGTCATAACAGAACT+CGG 0.533887 2_2:-3182181 None:intergenic
GAATTAAGGCCGTACCTGGT+AGG 0.540850 2_2:+3184234 Msa0230980:CDS
CCAGCTGCCCCTACCAGGTA+CGG 0.552725 2_2:-3184243 None:intergenic
CCGGTAACTGATGAAGAAAC+CGG 0.553976 2_2:+3182259 Msa0230980:CDS
TGTTGTCCTAAAAGAAACAT+TGG 0.558584 2_2:-3180852 None:intergenic
ATGTCATACTTCATTCCCAT+TGG 0.560839 2_2:-3184477 None:intergenic
AGGAAGAAACGGAACTTTGG+TGG 0.562446 2_2:+3180421 Msa0230980:five_prime_UTR
AATTGAGGAGCCAATAGTAA+AGG 0.562850 2_2:+3184287 Msa0230980:CDS
AGAGGAATTAAGGCCGTACC+TGG 0.564029 2_2:+3184230 Msa0230980:CDS
TTGACTGTAATAATAATGGA+AGG 0.568999 2_2:-3184550 None:intergenic
ACCAAACGGACGTGTATGAA+AGG 0.569126 2_2:-3180909 None:intergenic
GAAAATCAGCACCCGATGCA+AGG 0.579496 2_2:+3180656 Msa0230980:intron
CGGACGTGTATGAAAGGAAA+GGG 0.582467 2_2:-3180903 None:intergenic
TACCTGGTAGGGGCAGCTGG+TGG 0.585925 2_2:+3184246 Msa0230980:CDS
AAAGGGAAGGACGCGGCAGA+AGG 0.586202 2_2:-3180886 None:intergenic
GTGACTGTTTCAGGTTCTAG+AGG 0.588325 2_2:+3184212 Msa0230980:intron
ATTAAGGCCGTACCTGGTAG+GGG 0.594661 2_2:+3184236 Msa0230980:CDS
CCACCGTCTGATATGAGATA+CGG 0.596291 2_2:-3182088 None:intergenic
TGAAAATGTAGAAACTGTGT+TGG 0.605986 2_2:+3182054 Msa0230980:CDS
GGAAGAAACGGAACTTTGGT+GGG 0.606856 2_2:+3180422 Msa0230980:five_prime_UTR
AAATGATGAAAATATAGAGA+AGG 0.609423 2_2:+3182291 Msa0230980:CDS
TGAAGTTACAGGGTGCCTGT+GGG 0.613999 2_2:+3182152 Msa0230980:CDS
TTCCACAGCTGAATTTGGAG+TGG 0.615913 2_2:-3182017 None:intergenic
AGAACTCGGACACGACCCAC+AGG 0.616393 2_2:-3182167 None:intergenic
AAATCGATGGCAATGTTGTA+CGG 0.617193 2_2:+3182128 Msa0230980:CDS
GTGATGGAAGAAGAAGAAGA+AGG 0.618429 2_2:-3180725 None:intergenic
AGTACGGGGTTTAAAGGACG+AGG 0.621139 2_2:+3184962 Msa0230980:three_prime_UTR
GCACCCGATGCAAGGTGTGG+TGG 0.624441 2_2:+3180664 Msa0230980:exon
ACGGACGTGTATGAAAGGAA+AGG 0.624764 2_2:-3180904 None:intergenic
GTCGCTCTACATGAAATCGA+TGG 0.627147 2_2:+3182115 Msa0230980:CDS
TGCCACTCCAAATTCAGCTG+TGG 0.629430 2_2:+3182015 Msa0230980:CDS
GTTGTACGGTTGAAGTTACA+GGG 0.634834 2_2:+3182142 Msa0230980:CDS
ATGCTATGTCTGAATTGTAT+CGG 0.636868 2_2:+3184881 Msa0230980:intron
TCAACCACTAATAGAATTTG+GGG 0.638422 2_2:-3185094 None:intergenic
CGGCCGTATCTCATATCAGA+CGG 0.648569 2_2:+3182085 Msa0230980:CDS
GCACTTGAGCTTAGGCAGAG+AGG 0.650533 2_2:+3185011 Msa0230980:three_prime_UTR
AACACGCACAGTCATGACAC+CGG 0.653006 2_2:-3184331 None:intergenic
AAGAACTTAACGCTATCAAG+TGG 0.653517 2_2:+3184783 Msa0230980:three_prime_UTR
AAAATCATCAATTATCTGTG+AGG 0.656996 2_2:+3185034 Msa0230980:three_prime_UTR
TCAGCACCCGATGCAAGGTG+TGG 0.661795 2_2:+3180661 Msa0230980:exon
TGAAAGGAAAGGGAAGGACG+CGG 0.666949 2_2:-3180893 None:intergenic
CGTGTATGAAAGGAAAGGGA+AGG 0.668106 2_2:-3180899 None:intergenic
GTGATATTATTGCTAGTACG+GGG 0.670503 2_2:+3184948 Msa0230980:three_prime_UTR
AGAAACGGAACTTTGGTGGG+TGG 0.679679 2_2:+3180425 Msa0230980:five_prime_UTR
CCGTATCTCATATCAGACGG+TGG 0.699947 2_2:+3182088 Msa0230980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATAATAATTAAAACG+AGG - chr2_2:3180801-3180820 None:intergenic 10.0%
!!! AGTTTTTAAAAATTGTTTTT+GGG - chr2_2:3183371-3183390 None:intergenic 10.0%
!!! TAGTTTTTAAAAATTGTTTT+TGG - chr2_2:3183372-3183391 None:intergenic 10.0%
!!! AAAACTAATATTTTTTATGA+AGG + chr2_2:3183385-3183404 Msa0230980:intron 10.0%
!!! AAACTAATATTTTTTATGAA+GGG + chr2_2:3183386-3183405 Msa0230980:intron 10.0%
!!! CATAATTTTTATAAATCATA+GGG - chr2_2:3183429-3183448 None:intergenic 10.0%
!!! ACATAATTTTTATAAATCAT+AGG - chr2_2:3183430-3183449 None:intergenic 10.0%
!!! TGTGTTAATTTTTTTTTAAA+GGG - chr2_2:3183514-3183533 None:intergenic 10.0%
!! TGATTGATTAATTGATTATT+AGG + chr2_2:3180567-3180586 Msa0230980:intron 15.0%
!!! ATTTGATTTTGATTTTGATT+TGG + chr2_2:3180628-3180647 Msa0230980:intron 15.0%
!! TTTAATTGAAGAAAAATAGT+TGG - chr2_2:3181119-3181138 None:intergenic 15.0%
!! CTTATGAAAATATGTTAAAA+GGG - chr2_2:3181434-3181453 None:intergenic 15.0%
!! ACTTATGAAAATATGTTAAA+AGG - chr2_2:3181435-3181454 None:intergenic 15.0%
!! CTTTACAACTTAAATAATAT+AGG + chr2_2:3182908-3182927 Msa0230980:intron 15.0%
!!! GTGTGTTAATTTTTTTTTAA+AGG - chr2_2:3183515-3183534 None:intergenic 15.0%
!! AAACAAAACAAAAGAGAATT+TGG + chr2_2:3180512-3180531 Msa0230980:intron 20.0%
!! TAACTAAATAACTAACCAAA+CGG - chr2_2:3180926-3180945 None:intergenic 20.0%
!! TATATTAGAGAACTTATGAA+AGG - chr2_2:3181277-3181296 None:intergenic 20.0%
!! AGAAATATTGAAGTTGAATT+TGG - chr2_2:3181891-3181910 None:intergenic 20.0%
!! TTAATATAACAACTCAGTTT+CGG + chr2_2:3181928-3181947 Msa0230980:intron 20.0%
!! AAATGATGAAAATATAGAGA+AGG + chr2_2:3182291-3182310 Msa0230980:CDS 20.0%
!! ACATAATGAACATTCAAATA+TGG - chr2_2:3182372-3182391 None:intergenic 20.0%
!!! GAAAATTTATAGCGTATTTT+AGG + chr2_2:3182405-3182424 Msa0230980:intron 20.0%
!! ATGAAAAAAATATAGCATCT+AGG + chr2_2:3182562-3182581 Msa0230980:intron 20.0%
!! TGAAAAAAATATAGCATCTA+GGG + chr2_2:3182563-3182582 Msa0230980:intron 20.0%
!! TGTGGTGTATAATATAATAA+AGG + chr2_2:3182725-3182744 Msa0230980:intron 20.0%
!! ATTTAAAGAGATATGTAACT+CGG + chr2_2:3182776-3182795 Msa0230980:intron 20.0%
!!! TTAGATATATGTTTTCGAAT+TGG + chr2_2:3182845-3182864 Msa0230980:intron 20.0%
!! CAGAAATTTAATCCTATTAT+TGG - chr2_2:3183124-3183143 None:intergenic 20.0%
!!! ACTTCTTTTCATAATAGAAA+GGG + chr2_2:3183151-3183170 Msa0230980:intron 20.0%
!!! TAATATTTTTTATGAAGGGT+TGG + chr2_2:3183390-3183409 Msa0230980:intron 20.0%
!!! ATTTTTATAAATCATAGGGT+TGG - chr2_2:3183425-3183444 None:intergenic 20.0%
!!! TAGCTATATTTTCTTTTTTG+AGG + chr2_2:3184713-3184732 Msa0230980:three_prime_UTR 20.0%
!!! AGCTATATTTTCTTTTTTGA+GGG + chr2_2:3184714-3184733 Msa0230980:three_prime_UTR 20.0%
!!! TAAGCAATTTAAAATGTTGT+AGG + chr2_2:3185069-3185088 Msa0230980:three_prime_UTR 20.0%
!!! AAGCAATTTAAAATGTTGTA+GGG + chr2_2:3185070-3185089 Msa0230980:three_prime_UTR 20.0%
! TAAATTCATACACATCCATT+TGG + chr2_2:3181052-3181071 Msa0230980:intron 25.0%
! AAATAGTTGGAATTTGAAGA+GGG - chr2_2:3181106-3181125 None:intergenic 25.0%
! AAAATAGTTGGAATTTGAAG+AGG - chr2_2:3181107-3181126 None:intergenic 25.0%
! TTCCTCTAACAAAAGATAAA+GGG - chr2_2:3181764-3181783 None:intergenic 25.0%
! ATTCCTCTAACAAAAGATAA+AGG - chr2_2:3181765-3181784 None:intergenic 25.0%
! AATAATGAAGATCACATGTT+AGG - chr2_2:3181970-3181989 None:intergenic 25.0%
! TTATGTTTGTACAGCTATAA+AGG + chr2_2:3181988-3182007 Msa0230980:intron 25.0%
! TTCTGTTATGACAATGAAAA+TGG + chr2_2:3182186-3182205 Msa0230980:CDS 25.0%
! TCTGTTATGACAATGAAAAT+GGG + chr2_2:3182187-3182206 Msa0230980:CDS 25.0%
! AAATTGAAGCATATAGTACT+TGG + chr2_2:3182504-3182523 Msa0230980:intron 25.0%
! AATTGAAGCATATAGTACTT+GGG + chr2_2:3182505-3182524 Msa0230980:intron 25.0%
! AAATTGAAGCATATAGTACT+TGG + chr2_2:3182504-3182523 Msa0230980:intron 25.0%
! AATTGAAGCATATAGTACTT+GGG + chr2_2:3182505-3182524 Msa0230980:intron 25.0%
!!! TTTACTTTTGAAAACACTTG+TGG + chr2_2:3182707-3182726 Msa0230980:intron 25.0%
! AAACGATATACAGGTAAATT+TGG - chr2_2:3182944-3182963 None:intergenic 25.0%
! ATCAGATTTAGAAACCAAAA+TGG + chr2_2:3183017-3183036 Msa0230980:intron 25.0%
! TATTATGAAAAGAAGTCAAG+AGG - chr2_2:3183147-3183166 None:intergenic 25.0%
!! GACTTCTTTTCATAATAGAA+AGG + chr2_2:3183150-3183169 Msa0230980:intron 25.0%
!! CTTCTTTTCATAATAGAAAG+GGG + chr2_2:3183152-3183171 Msa0230980:intron 25.0%
!!! TCTTTTTTCATTTTCTCTTG+GGG - chr2_2:3183240-3183259 None:intergenic 25.0%
!!! CTCTTTTTTCATTTTCTCTT+GGG - chr2_2:3183241-3183260 None:intergenic 25.0%
!!! TCTCTTTTTTCATTTTCTCT+TGG - chr2_2:3183242-3183261 None:intergenic 25.0%
!!! ATTTTTCAGAACAGAAAAAC+AGG - chr2_2:3183287-3183306 None:intergenic 25.0%
! TTGTGAAATTCAAACCATTT+GGG + chr2_2:3183688-3183707 Msa0230980:intron 25.0%
!! TTTCTTTTAATGAAACGCAT+GGG - chr2_2:3183948-3183967 None:intergenic 25.0%
!! TAATTTTTCATGAACACCAA+TGG + chr2_2:3184461-3184480 Msa0230980:three_prime_UTR 25.0%
!! AATTTTTCATGAACACCAAT+GGG + chr2_2:3184462-3184481 Msa0230980:three_prime_UTR 25.0%
!! TTGACTGTAATAATAATGGA+AGG - chr2_2:3184553-3184572 None:intergenic 25.0%
! GACTTTGACTGTAATAATAA+TGG - chr2_2:3184557-3184576 None:intergenic 25.0%
! AAATCACGATTACAACATAA+TGG - chr2_2:3184611-3184630 None:intergenic 25.0%
!!! TGTAATCGTGATTTTTAGAA+TGG + chr2_2:3184617-3184636 Msa0230980:three_prime_UTR 25.0%
! GACATTATACTATTATAGTC+AGG - chr2_2:3184655-3184674 None:intergenic 25.0%
! AAAATCATCAATTATCTGTG+AGG + chr2_2:3185034-3185053 Msa0230980:three_prime_UTR 25.0%
! AATGAAACCTACCTTTTTGA+GGG - chr2_2:3180750-3180769 None:intergenic 30.0%
! AAATGAAACCTACCTTTTTG+AGG - chr2_2:3180751-3180770 None:intergenic 30.0%
!! TATACTTTCTTTGTTGTTGC+AGG + chr2_2:3180820-3180839 Msa0230980:intron 30.0%
!! ATACTTTCTTTGTTGTTGCA+GGG + chr2_2:3180821-3180840 Msa0230980:intron 30.0%
TGTTGTCCTAAAAGAAACAT+TGG - chr2_2:3180855-3180874 None:intergenic 30.0%
TATTTAGTTACCTACTTCCA+AGG + chr2_2:3180936-3180955 Msa0230980:intron 30.0%
ACAGACAGTTATGATGAATA+TGG - chr2_2:3180962-3180981 None:intergenic 30.0%
ATCATAACTGTCTGTATGTT+TGG + chr2_2:3180967-3180986 Msa0230980:intron 30.0%
TGACTAACAAACTAACCAAA+TGG - chr2_2:3181070-3181089 None:intergenic 30.0%
AATAGTTGGAATTTGAAGAG+GGG - chr2_2:3181105-3181124 None:intergenic 30.0%
AAACTTATGCTGTCTCAAAT+GGG - chr2_2:3181188-3181207 None:intergenic 30.0%
AAAACTTATGCTGTCTCAAA+TGG - chr2_2:3181189-3181208 None:intergenic 30.0%
!! ATAAGTTTTGTGAGACTGTT+TGG + chr2_2:3181200-3181219 Msa0230980:intron 30.0%
!! TAAGTTTTGTGAGACTGTTT+GGG + chr2_2:3181201-3181220 Msa0230980:intron 30.0%
AATAAGCTGTTTATCCAAAC+AGG + chr2_2:3181408-3181427 Msa0230980:intron 30.0%
AGTTATTTGAGTATATCCGT+TGG - chr2_2:3181728-3181747 None:intergenic 30.0%
TACATGAATGTGAATAAGCA+TGG + chr2_2:3181849-3181868 Msa0230980:intron 30.0%
! TCTACATTTTCAGCAGTTAA+TGG - chr2_2:3182046-3182065 None:intergenic 30.0%
TGAAAATGTAGAAACTGTGT+TGG + chr2_2:3182054-3182073 Msa0230980:CDS 30.0%
AAACTGTGTTGGATGAAATT+CGG + chr2_2:3182065-3182084 Msa0230980:CDS 30.0%
TTCATTGTCATAACAGAACT+CGG - chr2_2:3182184-3182203 None:intergenic 30.0%
!! CGTTTACATAAGCTTTAAGA+GGG + chr2_2:3182456-3182475 Msa0230980:intron 30.0%
!! AGGCCTGATAAATTTGTTTT+CGG + chr2_2:3182745-3182764 Msa0230980:intron 30.0%
GATCCGAAAACAAATTTATC+AGG - chr2_2:3182751-3182770 None:intergenic 30.0%
TCAACTGTTATGCCAATAAT+AGG + chr2_2:3183109-3183128 Msa0230980:intron 30.0%
! CTCTGCTTCTATTTTGTAAA+AGG - chr2_2:3183203-3183222 None:intergenic 30.0%
AAAAGAGAACAAAAACAACC+TGG + chr2_2:3183254-3183273 Msa0230980:intron 30.0%
TATATGGCTATCAAGACATA+TGG - chr2_2:3183456-3183475 None:intergenic 30.0%
! GATCTGATAATTGACTTCAA+AGG + chr2_2:3183581-3183600 Msa0230980:intron 30.0%
GTTGTGAAATTCAAACCATT+TGG + chr2_2:3183687-3183706 Msa0230980:intron 30.0%
AATTCTGTACACTGTCTATT+TGG + chr2_2:3183853-3183872 Msa0230980:intron 30.0%
! CTTTCTTTTAATGAAACGCA+TGG - chr2_2:3183949-3183968 None:intergenic 30.0%
TTTCTGTACATGTAGGATTA+TGG + chr2_2:3184014-3184033 Msa0230980:intron 30.0%
TAATATGTAGTGACTGTTTC+AGG + chr2_2:3184203-3184222 Msa0230980:intron 30.0%
! ATCATAATGTTTTCACACAG+TGG + chr2_2:3184521-3184540 Msa0230980:three_prime_UTR 30.0%
TTCCATTAGTGACAACATTA+TGG - chr2_2:3184764-3184783 None:intergenic 30.0%
ATGCTATGTCTGAATTGTAT+CGG + chr2_2:3184831-3184850 Msa0230980:intron 30.0%
AATTGTATCGGAACAAGATT+TGG + chr2_2:3184843-3184862 Msa0230980:intron 30.0%
ATGCTATGTCTGAATTGTAT+CGG + chr2_2:3184831-3184850 Msa0230980:intron 30.0%
AATTGTATCGGAATGAGATT+TGG + chr2_2:3184893-3184912 Msa0230980:three_prime_UTR 30.0%
TCGTGATATTATTGCTAGTA+CGG + chr2_2:3184946-3184965 Msa0230980:three_prime_UTR 30.0%
ATCAATCAATCGATCACGAA+AGG - chr2_2:3180555-3180574 None:intergenic 35.0%
AGAAGAAGAAGAAGGTTGAA+GGG - chr2_2:3180720-3180739 None:intergenic 35.0%
AAGAAGAAGAAGAAGGTTGA+AGG - chr2_2:3180721-3180740 None:intergenic 35.0%
! CTGGTACCAATGTTTCTTTT+AGG + chr2_2:3180846-3180865 Msa0230980:CDS 35.0%
AGTTATGATGAATATGGCCT+TGG - chr2_2:3180956-3180975 None:intergenic 35.0%
!! AAGTTTTGTGAGACTGTTTG+GGG + chr2_2:3181202-3181221 Msa0230980:intron 35.0%
! GCTATAGAAGTAGCTTTTGT+AGG + chr2_2:3181353-3181372 Msa0230980:intron 35.0%
ATATGTTAAAAGGGCCTGTT+TGG - chr2_2:3181425-3181444 None:intergenic 35.0%
TCTCACAAAACTTATGCCAA+CGG + chr2_2:3181709-3181728 Msa0230980:intron 35.0%
CAAAAGATAAAGGGTCTGTT+TGG - chr2_2:3181755-3181774 None:intergenic 35.0%
! GACCCTTTATCTTTTGTTAG+AGG + chr2_2:3181759-3181778 Msa0230980:intron 35.0%
AACAACTCAGTTTCGGAAAT+TGG + chr2_2:3181935-3181954 Msa0230980:intron 35.0%
ACAACTCAGTTTCGGAAATT+GGG + chr2_2:3181936-3181955 Msa0230980:intron 35.0%
AAATCGATGGCAATGTTGTA+CGG + chr2_2:3182128-3182147 Msa0230980:CDS 35.0%
!! GCGTTTACATAAGCTTTAAG+AGG + chr2_2:3182455-3182474 Msa0230980:intron 35.0%
!!! GCAGAAGTACCATGTTTTAT+GGG + chr2_2:3183039-3183058 Msa0230980:intron 35.0%
TCACTCTAACCCATAAAACA+TGG - chr2_2:3183051-3183070 None:intergenic 35.0%
!! TTTATGGGTTAGAGTGACAA+AGG + chr2_2:3183054-3183073 Msa0230980:intron 35.0%
ATATAACACTCACCAATCGA+GGG + chr2_2:3183471-3183490 Msa0230980:intron 35.0%
! ACACCTGTAGTTGAAGTTTT+TGG + chr2_2:3183531-3183550 Msa0230980:intron 35.0%
! CACCTGTAGTTGAAGTTTTT+GGG + chr2_2:3183532-3183551 Msa0230980:intron 35.0%
ATGTGTAACTTCATCCCAAA+TGG - chr2_2:3183705-3183724 None:intergenic 35.0%
AAGGCTAGACATTTACTAAC+TGG - chr2_2:3183815-3183834 None:intergenic 35.0%
TGAGTAACAGCAACAGTTAA+AGG - chr2_2:3183834-3183853 None:intergenic 35.0%
!! ATTTGGTGGTATGGGATTTT+AGG + chr2_2:3183870-3183889 Msa0230980:intron 35.0%
TGAATTCTAACCAACCTACA+CGG - chr2_2:3183981-3184000 None:intergenic 35.0%
AGGATTATGGTTATTGAGTC+TGG + chr2_2:3184027-3184046 Msa0230980:intron 35.0%
!! TTCAGGTTCTAGAGGAATTA+AGG + chr2_2:3184220-3184239 Msa0230980:intron 35.0%
! TCTTGAATTGGTAGCAATTG+AGG + chr2_2:3184272-3184291 Msa0230980:CDS 35.0%
AATTGAGGAGCCAATAGTAA+AGG + chr2_2:3184287-3184306 Msa0230980:CDS 35.0%
! GTTCAGCTGCTATGATATTT+TGG + chr2_2:3184399-3184418 Msa0230980:exon 35.0%
ATGTCATACTTCATTCCCAT+TGG - chr2_2:3184480-3184499 None:intergenic 35.0%
! ATAATGTTTTCACACAGTGG+AGG + chr2_2:3184524-3184543 Msa0230980:three_prime_UTR 35.0%
CTCCATAATGTTGTCACTAA+TGG + chr2_2:3184759-3184778 Msa0230980:three_prime_UTR 35.0%
AAGAACTTAACGCTATCAAG+TGG + chr2_2:3184783-3184802 Msa0230980:three_prime_UTR 35.0%
ATCGGAATGAGATTTGGAAA+TGG + chr2_2:3184899-3184918 Msa0230980:three_prime_UTR 35.0%
! TGGAGTGTCAAAACTATTTG+TGG + chr2_2:3184919-3184938 Msa0230980:three_prime_UTR 35.0%
CGTGATATTATTGCTAGTAC+GGG + chr2_2:3184947-3184966 Msa0230980:three_prime_UTR 35.0%
GTGATATTATTGCTAGTACG+GGG + chr2_2:3184948-3184967 Msa0230980:three_prime_UTR 35.0%
GACGAGGTTGTTTGTATATT+TGG + chr2_2:3184978-3184997 Msa0230980:three_prime_UTR 35.0%
GAAAGGAAGAAACGGAACTT+TGG + chr2_2:3180418-3180437 Msa0230980:five_prime_UTR 40.0%
ATCGATCACGAAAGGAAATG+AGG - chr2_2:3180547-3180566 None:intergenic 40.0%
CGAAACGAAACGAAACGAAA+AGG + chr2_2:3180605-3180624 Msa0230980:intron 40.0%
! GTGATGGAAGAAGAAGAAGA+AGG - chr2_2:3180728-3180747 None:intergenic 40.0%
TTCTTCCATCACCCTCAAAA+AGG + chr2_2:3180736-3180755 Msa0230980:CDS 40.0%
! ATGAATATGGCCTTGGAAGT+AGG - chr2_2:3180949-3180968 None:intergenic 40.0%
ATGCTGTCTCAAATGGGATT+GGG - chr2_2:3181182-3181201 None:intergenic 40.0%
TATGCTGTCTCAAATGGGAT+TGG - chr2_2:3181183-3181202 None:intergenic 40.0%
!! AGTTTTGTGAGACTGTTTGG+GGG + chr2_2:3181203-3181222 Msa0230980:intron 40.0%
AATGTGAATAAGCATGGCAC+TGG + chr2_2:3181855-3181874 Msa0230980:intron 40.0%
TGTTGTACGGTTGAAGTTAC+AGG + chr2_2:3182141-3182160 Msa0230980:CDS 40.0%
GTTGTACGGTTGAAGTTACA+GGG + chr2_2:3182142-3182161 Msa0230980:CDS 40.0%
! TTCATCATTTAGCTCGAGAC+CGG - chr2_2:3182281-3182300 None:intergenic 40.0%
TGAAGCATATAGTACTTGGG+CGG + chr2_2:3182508-3182527 Msa0230980:intron 40.0%
TGAAGCATATAGTACTTGGG+CGG + chr2_2:3182508-3182527 Msa0230980:intron 40.0%
GGTAGGCTTAAACGATATAC+AGG - chr2_2:3182953-3182972 None:intergenic 40.0%
!! ACATGGTACTTCTGCCATTT+TGG - chr2_2:3183034-3183053 None:intergenic 40.0%
!!! GGCAGAAGTACCATGTTTTA+TGG + chr2_2:3183038-3183057 Msa0230980:intron 40.0%
AGAAAGGGGATGAGTAATTG+AGG + chr2_2:3183166-3183185 Msa0230980:intron 40.0%
AGAGAACAAAAACAACCTGG+AGG + chr2_2:3183257-3183276 Msa0230980:intron 40.0%
CTCGATTGGTGAGTGTTATA+TGG - chr2_2:3183472-3183491 None:intergenic 40.0%
CATATAACACTCACCAATCG+AGG + chr2_2:3183470-3183489 Msa0230980:intron 40.0%
CTCCCAAAAACTTCAACTAC+AGG - chr2_2:3183537-3183556 None:intergenic 40.0%
CTAACTGGCTACTTCTTACA+AGG - chr2_2:3183800-3183819 None:intergenic 40.0%
TCTGTACACTGTCTATTTGG+TGG + chr2_2:3183856-3183875 Msa0230980:intron 40.0%
! ACACTGTCTATTTGGTGGTA+TGG + chr2_2:3183861-3183880 Msa0230980:intron 40.0%
! CACTGTCTATTTGGTGGTAT+GGG + chr2_2:3183862-3183881 Msa0230980:intron 40.0%
! CTGCGTTTTTCTGTACATGT+AGG + chr2_2:3184007-3184026 Msa0230980:intron 40.0%
! GTGATTCGGACCTTTACTAT+TGG - chr2_2:3184300-3184319 None:intergenic 40.0%
ATAGTAAAGGTCCGAATCAC+AGG + chr2_2:3184300-3184319 Msa0230980:CDS 40.0%
ATTGCTAGTACGGGGTTTAA+AGG + chr2_2:3184956-3184975 Msa0230980:three_prime_UTR 40.0%
CTTATGTTGCACTTGAGCTT+AGG + chr2_2:3185003-3185022 Msa0230980:three_prime_UTR 40.0%
AGGAAGAAACGGAACTTTGG+TGG + chr2_2:3180421-3180440 Msa0230980:five_prime_UTR 45.0%
GGAAGAAACGGAACTTTGGT+GGG + chr2_2:3180422-3180441 Msa0230980:five_prime_UTR 45.0%
GATCACGAAAGGAAATGAGG+AGG - chr2_2:3180544-3180563 None:intergenic 45.0%
TCCATCACCCTCAAAAAGGT+AGG + chr2_2:3180740-3180759 Msa0230980:intron 45.0%
!! ACCTACCTTTTTGAGGGTGA+TGG - chr2_2:3180744-3180763 None:intergenic 45.0%
CGTGTATGAAAGGAAAGGGA+AGG - chr2_2:3180902-3180921 None:intergenic 45.0%
CGGACGTGTATGAAAGGAAA+GGG - chr2_2:3180906-3180925 None:intergenic 45.0%
ACGGACGTGTATGAAAGGAA+AGG - chr2_2:3180907-3180926 None:intergenic 45.0%
TCCTTTCATACACGTCCGTT+TGG + chr2_2:3180908-3180927 Msa0230980:CDS 45.0%
ACCAAACGGACGTGTATGAA+AGG - chr2_2:3180912-3180931 None:intergenic 45.0%
AGTTTCGGAAATTGGGAGCT+GGG + chr2_2:3181943-3181962 Msa0230980:intron 45.0%
! AGCTGAATTTGGAGTGGCAA+CGG - chr2_2:3182014-3182033 None:intergenic 45.0%
TTCCACAGCTGAATTTGGAG+TGG - chr2_2:3182020-3182039 None:intergenic 45.0%
GGCAATTCCACAGCTGAATT+TGG - chr2_2:3182025-3182044 None:intergenic 45.0%
CCACCGTCTGATATGAGATA+CGG - chr2_2:3182091-3182110 None:intergenic 45.0%
GTCGCTCTACATGAAATCGA+TGG + chr2_2:3182115-3182134 Msa0230980:CDS 45.0%
GTTCGACTGCGACTATTTCA+GGG - chr2_2:3182240-3182259 None:intergenic 45.0%
TGAAATAGTCGCAGTCGAAC+CGG + chr2_2:3182240-3182259 Msa0230980:CDS 45.0%
CCGGTTTCTTCATCAGTTAC+CGG - chr2_2:3182262-3182281 None:intergenic 45.0%
CCGGTAACTGATGAAGAAAC+CGG + chr2_2:3182259-3182278 Msa0230980:CDS 45.0%
!! AGGAGGCATTGCAATCATAC+TGG + chr2_2:3182985-3183004 Msa0230980:intron 45.0%
!! GGAGGCATTGCAATCATACT+GGG + chr2_2:3182986-3183005 Msa0230980:intron 45.0%
!! ATGGGTTAGAGTGACAAAGG+AGG + chr2_2:3183057-3183076 Msa0230980:intron 45.0%
AGAAAAACAGGAACACCTCC+AGG - chr2_2:3183275-3183294 None:intergenic 45.0%
GAAAGATGCTTTGTCCGTGT+AGG + chr2_2:3183964-3183983 Msa0230980:intron 45.0%
!! GTGACTGTTTCAGGTTCTAG+AGG + chr2_2:3184212-3184231 Msa0230980:intron 45.0%
AATTAAGGCCGTACCTGGTA+GGG + chr2_2:3184235-3184254 Msa0230980:CDS 45.0%
AGCTGGTGGAACTCTTGAAT+TGG + chr2_2:3184260-3184279 Msa0230980:CDS 45.0%
AGAAACGGAACTTTGGTGGG+TGG + chr2_2:3180425-3180444 Msa0230980:five_prime_UTR 50.0%
TGCGATTGGCGATGGTGTTT+GGG + chr2_2:3180450-3180469 Msa0230980:five_prime_UTR 50.0%
ATTGGCGATGGTGTTTGGGT+GGG + chr2_2:3180454-3180473 Msa0230980:five_prime_UTR 50.0%
GAAAATCAGCACCCGATGCA+AGG + chr2_2:3180656-3180675 Msa0230980:intron 50.0%
!! TCTTTGTTGTTGCAGGGCAC+TGG + chr2_2:3180827-3180846 Msa0230980:intron 50.0%
TGAAAGGAAAGGGAAGGACG+CGG - chr2_2:3180896-3180915 None:intergenic 50.0%
GTCTCAAATGGGATTGGGCA+TGG - chr2_2:3181177-3181196 None:intergenic 50.0%
! GTGAATAAGCATGGCACTGG+AGG + chr2_2:3181858-3181877 Msa0230980:intron 50.0%
CAGTTTCGGAAATTGGGAGC+TGG + chr2_2:3181942-3181961 Msa0230980:intron 50.0%
TGCCACTCCAAATTCAGCTG+TGG + chr2_2:3182015-3182034 Msa0230980:CDS 50.0%
CGGCCGTATCTCATATCAGA+CGG + chr2_2:3182085-3182104 Msa0230980:CDS 50.0%
CCGTATCTCATATCAGACGG+TGG + chr2_2:3182088-3182107 Msa0230980:CDS 50.0%
! TTGAAGTTACAGGGTGCCTG+TGG + chr2_2:3182151-3182170 Msa0230980:CDS 50.0%
! TGAAGTTACAGGGTGCCTGT+GGG + chr2_2:3182152-3182171 Msa0230980:CDS 50.0%
!! GGGCATTGAGCGTCGATTAA+TGG + chr2_2:3182207-3182226 Msa0230980:CDS 50.0%
GGTTCGACTGCGACTATTTC+AGG - chr2_2:3182241-3182260 None:intergenic 50.0%
AGCCTACCAGCTAGATTCAG+AGG + chr2_2:3182965-3182984 Msa0230980:intron 50.0%
CTCCTCTGAATCTAGCTGGT+AGG - chr2_2:3182970-3182989 None:intergenic 50.0%
CTACCAGCTAGATTCAGAGG+AGG + chr2_2:3182968-3182987 Msa0230980:intron 50.0%
ATGCCTCCTCTGAATCTAGC+TGG - chr2_2:3182974-3182993 None:intergenic 50.0%
GATGCTTTGTCCGTGTAGGT+TGG + chr2_2:3183968-3183987 Msa0230980:intron 50.0%
AGAGGAATTAAGGCCGTACC+TGG + chr2_2:3184230-3184249 Msa0230980:CDS 50.0%
GAATTAAGGCCGTACCTGGT+AGG + chr2_2:3184234-3184253 Msa0230980:CDS 50.0%
ATTAAGGCCGTACCTGGTAG+GGG + chr2_2:3184236-3184255 Msa0230980:CDS 50.0%
AACACGCACAGTCATGACAC+CGG - chr2_2:3184334-3184353 None:intergenic 50.0%
TAGCAGCTGAACTGCTGCTA+TGG - chr2_2:3184391-3184410 None:intergenic 50.0%
AGTACGGGGTTTAAAGGACG+AGG + chr2_2:3184962-3184981 Msa0230980:three_prime_UTR 50.0%
! TTTGGTGGGTGGTGTGCGAT+TGG + chr2_2:3180436-3180455 Msa0230980:five_prime_UTR 55.0%
GTGCGATTGGCGATGGTGTT+TGG + chr2_2:3180449-3180468 Msa0230980:five_prime_UTR 55.0%
GATTGGCGATGGTGTTTGGG+TGG + chr2_2:3180453-3180472 Msa0230980:five_prime_UTR 55.0%
AGCACCACCACACCTTGCAT+CGG - chr2_2:3180671-3180690 None:intergenic 55.0%
TCACCAATCGAGGGTGAGTG+TGG + chr2_2:3183480-3183499 Msa0230980:intron 55.0%
ATGCCACACTCACCCTCGAT+TGG - chr2_2:3183486-3183505 None:intergenic 55.0%
AGCTGAACTGCTGCTATGGC+AGG - chr2_2:3184387-3184406 None:intergenic 55.0%
GCACTTGAGCTTAGGCAGAG+AGG + chr2_2:3185011-3185030 Msa0230980:three_prime_UTR 55.0%
GTTTGGGTGGGTGACGTGAC+TGG + chr2_2:3180466-3180485 Msa0230980:five_prime_UTR 60.0%
TCAGCACCCGATGCAAGGTG+TGG + chr2_2:3180661-3180680 Msa0230980:exon 60.0%
GCACCACCACACCTTGCATC+GGG - chr2_2:3180670-3180689 None:intergenic 60.0%
AAAGGGAAGGACGCGGCAGA+AGG - chr2_2:3180889-3180908 None:intergenic 60.0%
AGAACTCGGACACGACCCAC+AGG - chr2_2:3182170-3182189 None:intergenic 60.0%
CGGCAGCTGGACCTGTGATT+CGG - chr2_2:3184314-3184333 None:intergenic 60.0%
CGAATCACAGGTCCAGCTGC+CGG + chr2_2:3184312-3184331 Msa0230980:CDS 60.0%
ACAGTCATGACACCGGCAGC+TGG - chr2_2:3184327-3184346 None:intergenic 60.0%
GGGTGGTGTGCGATTGGCGA+TGG + chr2_2:3180442-3180461 Msa0230980:five_prime_UTR 65.0%
GCACCCGATGCAAGGTGTGG+TGG + chr2_2:3180664-3180683 Msa0230980:exon 65.0%
CCAGCTGCCCCTACCAGGTA+CGG - chr2_2:3184246-3184265 None:intergenic 65.0%
TACCTGGTAGGGGCAGCTGG+TGG + chr2_2:3184246-3184265 Msa0230980:CDS 65.0%
TTCCACCAGCTGCCCCTACC+AGG - chr2_2:3184251-3184270 None:intergenic 65.0%
CCGTACCTGGTAGGGGCAGC+TGG + chr2_2:3184243-3184262 Msa0230980:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 3180416 3185101 3180416 ID=Msa0230980;Name=Msa0230980
chr2_2 mRNA 3180416 3185101 3180416 ID=Msa0230980-mRNA-1;Parent=Msa0230980;Name=Msa0230980-mRNA-1;_AED=0.09;_eAED=0.09;_QI=86|1|1|1|0.6|0.5|6|638|224
chr2_2 exon 3180416 3180487 3180416 ID=Msa0230980-mRNA-1:exon:1139;Parent=Msa0230980-mRNA-1
chr2_2 exon 3180657 3180757 3180657 ID=Msa0230980-mRNA-1:exon:1140;Parent=Msa0230980-mRNA-1
chr2_2 exon 3180842 3180929 3180842 ID=Msa0230980-mRNA-1:exon:1141;Parent=Msa0230980-mRNA-1
chr2_2 exon 3182002 3182312 3182002 ID=Msa0230980-mRNA-1:exon:1142;Parent=Msa0230980-mRNA-1
chr2_2 exon 3184225 3184837 3184225 ID=Msa0230980-mRNA-1:exon:1143;Parent=Msa0230980-mRNA-1
chr2_2 exon 3184888 3185101 3184888 ID=Msa0230980-mRNA-1:exon:1144;Parent=Msa0230980-mRNA-1
chr2_2 five_prime_UTR 3180416 3180487 3180416 ID=Msa0230980-mRNA-1:five_prime_utr;Parent=Msa0230980-mRNA-1
chr2_2 five_prime_UTR 3180657 3180670 3180657 ID=Msa0230980-mRNA-1:five_prime_utr;Parent=Msa0230980-mRNA-1
chr2_2 CDS 3180671 3180757 3180671 ID=Msa0230980-mRNA-1:cds;Parent=Msa0230980-mRNA-1
chr2_2 CDS 3180842 3180929 3180842 ID=Msa0230980-mRNA-1:cds;Parent=Msa0230980-mRNA-1
chr2_2 CDS 3182002 3182312 3182002 ID=Msa0230980-mRNA-1:cds;Parent=Msa0230980-mRNA-1
chr2_2 CDS 3184225 3184413 3184225 ID=Msa0230980-mRNA-1:cds;Parent=Msa0230980-mRNA-1
chr2_2 three_prime_UTR 3184414 3184837 3184414 ID=Msa0230980-mRNA-1:three_prime_utr;Parent=Msa0230980-mRNA-1
chr2_2 three_prime_UTR 3184888 3185101 3184888 ID=Msa0230980-mRNA-1:three_prime_utr;Parent=Msa0230980-mRNA-1
Gene Sequence

>Msa0230980

ATGCAAGGTGTGGTGGTGCTCAACACACAATCTTACTGCACAGCTACCCTTCAACCTTCTTCTTCTTCTTCCATCACCCTCAAAAAGGGCACTGGTACCAATGTTTCTTTTAGGACAACAAGTAACAACAACCTTCTGCCGCGTCCTTCCCTTTCCTTTCATACACGTCCGTTTGCTATAAAGGCCGTTGCCACTCCAAATTCAGCTGTGGAATTGCCATTAACTGCTGAAAATGTAGAAACTGTGTTGGATGAAATTCGGCCGTATCTCATATCAGACGGTGGAAATGTCGCTCTACATGAAATCGATGGCAATGTTGTACGGTTGAAGTTACAGGGTGCCTGTGGGTCGTGTCCGAGTTCTGTTATGACAATGAAAATGGGCATTGAGCGTCGATTAATGGAAAAGATCCCTGAAATAGTCGCAGTCGAACCGGTAACTGATGAAGAAACCGGTCTCGAGCTAAATGATGAAAATATAGAGAAGGTTCTAGAGGAATTAAGGCCGTACCTGGTAGGGGCAGCTGGTGGAACTCTTGAATTGGTAGCAATTGAGGAGCCAATAGTAAAGGTCCGAATCACAGGTCCAGCTGCCGGTGTCATGACTGTGCGTGTTGCTGTTACACAAAAATTGCGAGAAAAAATACCTGCCATAGCAGCAGTTCAGCTGCTATGA

Protein sequence

>Msa0230980

MQGVVVLNTQSYCTATLQPSSSSSITLKKGTGTNVSFRTTSNNNLLPRPSLSFHTRPFAIKAVATPNSAVELPLTAENVETVLDEIRPYLISDGGNVALHEIDGNVVRLKLQGACGSCPSSVMTMKMGIERRLMEKIPEIVAVEPVTDEETGLELNDENIEKVLEELRPYLVGAAGGTLELVAIEEPIVKVRITGPAAGVMTVRVAVTQKLREKIPAIAAVQLL*