AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1314330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1314330 MtrunA17_Chr8g0343491 96.618 680 5 3 1 665 1 677 0.0 1352
Msa1314330 MtrunA17_Chr4g0027511 52.019 644 266 11 54 665 6 638 0.0 659
Msa1314330 MtrunA17_Chr6g0462921 54.286 105 31 2 229 333 38 125 3.15e-26 104
Msa1314330 MtrunA17_Chr4g0070721 37.963 108 27 2 558 665 35 102 5.28e-16 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1314330 AT5G13640.1 72.449 686 153 6 1 665 1 671 0.0 1021
Msa1314330 AT5G13640.3 75.479 522 110 3 162 665 6 527 0.0 810
Msa1314330 AT5G13640.2 75.340 515 109 3 169 665 1 515 0.0 796
Msa1314330 AT3G44830.1 55.621 676 251 10 23 665 6 665 0.0 773
Msa1314330 AT1G04010.1 22.774 483 304 17 123 585 44 477 1.67e-16 84.0

Find 216 sgRNAs with CRISPR-Local

Find 408 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAATTGCCTTAATATATT+TGG 0.103968 8_4:+13246724 None:intergenic
TAAGATGCACTCAGAATTTC+TGG 0.156244 8_4:-13243563 Msa1314330:three_prime_UTR
AGATTGTGGGGTGGGACTTT+TGG 0.201773 8_4:-13248673 Msa1314330:CDS
TATTTGTAGTGTTCATATTT+AGG 0.211408 8_4:+13245329 None:intergenic
TTGTTAACAGGGTGCAATTA+AGG 0.231525 8_4:-13245552 Msa1314330:intron
GTGGATTCCTCTCCCGTTAC+TGG 0.240774 8_4:-13243798 Msa1314330:three_prime_UTR
TTGGTTGCATTTGTACTTTA+TGG 0.241231 8_4:-13248909 Msa1314330:CDS
TTGCCGCAGGATACTTTGTT+TGG 0.248698 8_4:-13247116 Msa1314330:CDS
GGTAGTGATCATTTCTCTTA+TGG 0.264256 8_4:-13245374 Msa1314330:CDS
CGGTGCTCATGTTGATATAA+TGG 0.274500 8_4:-13243949 Msa1314330:CDS
TGCGTCTTCCTCTCTCCTTT+TGG 0.281518 8_4:+13243769 None:intergenic
CATATTTGTCAGATGCTTCA+TGG 0.282342 8_4:-13243445 Msa1314330:three_prime_UTR
AAAACAAGATTCAATCCTTC+AGG 0.299444 8_4:-13244044 Msa1314330:CDS
TGTGTCTATTTCTTTCTTAC+CGG 0.300944 8_4:-13243716 Msa1314330:three_prime_UTR
ATGGAAATCTTCTCTCTATA+TGG 0.302929 8_4:-13244266 Msa1314330:CDS
ACCTCCCAATTCTTCTCCTT+TGG 0.306639 8_4:+13243881 None:intergenic
TTACCGGTGGACTTGAACTT+TGG 0.316075 8_4:-13248732 Msa1314330:CDS
CGCCTTATTTCCACCATTAG+TGG 0.316185 8_4:+13246850 None:intergenic
TTCCACTAATGGTGGAAATA+AGG 0.317590 8_4:-13246852 Msa1314330:CDS
TTTGTTCCGGGGATTGTTAC+CGG 0.322005 8_4:-13248748 Msa1314330:CDS
CTTATAAATATAAGCTCTTT+CGG 0.325469 8_4:+13244229 None:intergenic
AGGAGCCAAAGGAGAAGAAT+TGG 0.328819 8_4:-13243886 Msa1314330:CDS
TGTATTCTGATATCTTTAAA+TGG 0.332543 8_4:-13243851 Msa1314330:CDS
GTTACCAAATGCCCCTGATA+TGG 0.335640 8_4:-13244285 Msa1314330:CDS
GACAGTTGTTGTTGGTTTGT+TGG 0.336488 8_4:-13248928 Msa1314330:CDS
GAACTCATGGTTTCCACTAA+TGG 0.339436 8_4:-13246863 Msa1314330:CDS
AGAGAGAAGATTTCCATATC+AGG 0.346793 8_4:+13244272 None:intergenic
AAAACATTAGATTTGTTGTA+TGG 0.353623 8_4:-13243483 Msa1314330:three_prime_UTR
GAAATTCTGAGTGCATCTTA+TGG 0.353986 8_4:+13243566 None:intergenic
CAAAGGGAGGGGACACCATA+TGG 0.361138 8_4:-13246107 Msa1314330:CDS
CCACTCTTTCATTTCTCTAA+AGG 0.367580 8_4:-13243644 Msa1314330:three_prime_UTR
GTGGACTGAATACCATGATA+TGG 0.370394 8_4:-13245495 Msa1314330:CDS
TTGTCACCACCATCGGCATT+AGG 0.371415 8_4:+13244164 None:intergenic
AATATGAACACTACAAATAT+TGG 0.371581 8_4:-13245325 Msa1314330:CDS
AATAAAACAAATGTCAACTA+TGG 0.372300 8_4:-13245994 Msa1314330:CDS
ATTTCCATATCAGGGGCATT+TGG 0.379794 8_4:+13244281 None:intergenic
TACCGGTGGACTTGAACTTT+GGG 0.383614 8_4:-13248731 Msa1314330:CDS
ATTGCAGTGAGTGGCGAAAC+AGG 0.386311 8_4:-13243521 Msa1314330:three_prime_UTR
TGCCGCAGGATACTTTGTTT+GGG 0.402404 8_4:-13247115 Msa1314330:CDS
ATTAGAGTCCGGCCTGTCTC+TGG 0.405457 8_4:-13247159 Msa1314330:CDS
AAAAGCCCTGCTATAGCCTT+TGG 0.405655 8_4:+13246674 None:intergenic
TGTTAACAGGGTGCAATTAA+GGG 0.405717 8_4:-13245551 Msa1314330:intron
CCTCCACCACCCATTGGAGC+TGG 0.407920 8_4:+13246764 None:intergenic
GATTGTTTAGGAAGAGATTG+TGG 0.412017 8_4:-13248687 Msa1314330:CDS
AAATCTCACTTTGTCTCCAA+TGG 0.415645 8_4:+13245296 None:intergenic
AGAAGAATTGGGAGGTGATA+AGG 0.418018 8_4:-13243874 Msa1314330:CDS
ACCGTTCCAGTTCTAAGTTC+AGG 0.418808 8_4:-13244095 Msa1314330:CDS
CTTGTGTTGACAGTTGTTGT+TGG 0.423297 8_4:-13248936 Msa1314330:CDS
ATATATTTGGAACACCAATC+TGG 0.423493 8_4:+13246737 None:intergenic
CCTCCAGCCAACCTGCTAGA+AGG 0.424011 8_4:-13243987 Msa1314330:CDS
TGCTTTGCTTTCTTGTGTGA+AGG 0.427362 8_4:+13246049 None:intergenic
GTGTTCCTCTACCTTCTAGC+AGG 0.427920 8_4:+13243976 None:intergenic
AATTTCAAACCAGGTGGATC+AGG 0.428308 8_4:+13248808 None:intergenic
TATGGAAGAATGATATCGTT+TGG 0.432064 8_4:-13245976 Msa1314330:CDS
CGTTGATTGAAGATGTTATG+AGG 0.435055 8_4:-13243917 Msa1314330:CDS
AATCTCACTTTGTCTCCAAT+GGG 0.435990 8_4:+13245297 None:intergenic
CCATATGGGGCGGCCTTGAT+TGG 0.437777 8_4:-13246092 Msa1314330:CDS
TATGTCACTGAGGCTATAAC+TGG 0.439467 8_4:-13248838 Msa1314330:CDS
GGTGCTCATGTTGATATAAT+GGG 0.440547 8_4:-13243948 Msa1314330:CDS
CATATGGTGTCCCCTCCCTT+TGG 0.441069 8_4:+13246108 None:intergenic
TTGGTGTTCCAAATATATTA+AGG 0.441232 8_4:-13246732 Msa1314330:CDS
GCTTTACTCGCAAAGGGGTG+TGG 0.443355 8_4:+13243678 None:intergenic
AAAAGGGTCAGAACCAGAAA+AGG 0.444668 8_4:-13249097 Msa1314330:CDS
CTACCTTCTAGCAGGTTGGC+TGG 0.446447 8_4:+13243984 None:intergenic
GCTCCAATGGGTGGTGGAGG+AGG 0.446584 8_4:-13246761 Msa1314330:CDS
ATGTCCCTTGACAATGAAAC+AGG 0.447578 8_4:-13247198 Msa1314330:CDS
AGTGTGAGTGAGAATTGAAA+AGG 0.448016 8_4:+13249273 None:intergenic
GGCGGTCCTAATTGCTAACT+TGG 0.452626 8_4:-13247094 Msa1314330:CDS
TTTCCTCTGGTGACCAATCA+AGG 0.454472 8_4:+13246079 None:intergenic
CCAATCAAGGCCGCCCCATA+TGG 0.454908 8_4:+13246092 None:intergenic
CATTCTGCTTTACTCGCAAA+GGG 0.458260 8_4:+13243672 None:intergenic
GTCACAAGGGCGATTGCACC+AGG 0.458509 8_4:-13246219 Msa1314330:intron
GCTTTGATCCGAAGAAGAAA+AGG 0.459566 8_4:-13249114 Msa1314330:CDS
GGTTTGAAATTGAAGAAAGA+AGG 0.460445 8_4:-13248796 Msa1314330:CDS
CCATTCCTGTTTCATTGTCA+AGG 0.461598 8_4:+13247193 None:intergenic
ATGTAGCCTGAACTTAGAAC+TGG 0.463062 8_4:+13244089 None:intergenic
GTTATTATTCCACATTCGAT+GGG 0.463783 8_4:-13246827 Msa1314330:CDS
GGTCCTCCTCCACCACCCAT+TGG 0.468600 8_4:+13246758 None:intergenic
CCAGCTCCAATGGGTGGTGG+AGG 0.468894 8_4:-13246764 Msa1314330:CDS
TGTGTTACAGACCTTCATGC+TGG 0.470900 8_4:-13247230 Msa1314330:intron
TTAGGAAGAGATTGTGGGGT+GGG 0.472729 8_4:-13248681 Msa1314330:CDS
TAAATATAAGCTCTTTCGGT+TGG 0.474291 8_4:+13244233 None:intergenic
TGTACATGGCTGCATATGAT+TGG 0.475105 8_4:-13247044 Msa1314330:CDS
CAAGAGGTATTTGCAACATT+GGG 0.475576 8_4:+13245527 None:intergenic
GAGAGAAGATTTCCATATCA+GGG 0.475876 8_4:+13244273 None:intergenic
TCCTCTACCTTCTAGCAGGT+TGG 0.476959 8_4:+13243980 None:intergenic
GGTGTTCCAAAGGCTATAGC+AGG 0.481359 8_4:-13246680 Msa1314330:CDS
GGTTGAAGCACCAGCTCCAA+TGG 0.483423 8_4:-13246774 Msa1314330:CDS
GTTTGTTGCTCCGAAAATGA+TGG 0.488987 8_4:-13245402 Msa1314330:CDS
ACCTTGCAACAGCAATGTCT+CGG 0.492893 8_4:+13246639 None:intergenic
TGAAGGCCACAGCTTTCCTC+TGG 0.494856 8_4:+13246066 None:intergenic
CAAGTTACCTTTGTGAGGGG+TGG 0.495625 8_4:-13243817 Msa1314330:exon
GTGTGAGTGAGAATTGAAAA+GGG 0.499625 8_4:+13249274 None:intergenic
CGGTGGACTTGAACTTTGGG+AGG 0.499887 8_4:-13248728 Msa1314330:CDS
GAACATAAAGTTTACACAGC+TGG 0.501037 8_4:-13245446 Msa1314330:CDS
GGTTATTATTCCACATTCGA+TGG 0.501585 8_4:-13246828 Msa1314330:CDS
TCAGGCTACATGTGTGCTAA+AGG 0.504236 8_4:-13244077 Msa1314330:CDS
GCATTAGGATCAATTTCAAA+AGG 0.506029 8_4:+13244179 None:intergenic
TATAAGCTCTTTCGGTTGGT+AGG 0.506491 8_4:+13244237 None:intergenic
GATGGTGTCTACACTGTTGA+TGG 0.507653 8_4:-13244125 Msa1314330:CDS
TCGGAGCAACAAACTGAAGC+AGG 0.508079 8_4:+13245411 None:intergenic
CAAATATTGGTCAAACCCAT+TGG 0.508140 8_4:-13245312 Msa1314330:CDS
AAAGGGAGGGGACACCATAT+GGG 0.509172 8_4:-13246106 Msa1314330:CDS
CATTCCTGTTTCATTGTCAA+GGG 0.511348 8_4:+13247194 None:intergenic
GGAGCCAAAGGAGAAGAATT+GGG 0.511925 8_4:-13243885 Msa1314330:CDS
CTCCCTCGACTCCCATATCA+TGG 0.515621 8_4:+13245483 None:intergenic
GCATTCTGCTTTACTCGCAA+AGG 0.516241 8_4:+13243671 None:intergenic
TCTTTCTTCAATTTCAAACC+AGG 0.518655 8_4:+13248799 None:intergenic
ACAAGAGGTATTTGCAACAT+TGG 0.518958 8_4:+13245526 None:intergenic
ATTCCTCTCCCGTTACTGGA+TGG 0.519396 8_4:-13243794 Msa1314330:three_prime_UTR
AAGGGAGGGGACACCATATG+GGG 0.519875 8_4:-13246105 Msa1314330:CDS
ATTGTTTAGGAAGAGATTGT+GGG 0.522996 8_4:-13248686 Msa1314330:CDS
GGAGGGGACACCATATGGGG+CGG 0.523536 8_4:-13246102 Msa1314330:CDS
GCTACATGTGTGCTAAAGGT+TGG 0.525578 8_4:-13244073 Msa1314330:CDS
CCTTGCAACAGCAATGTCTC+GGG 0.526953 8_4:+13246640 None:intergenic
ATCTTCTCTCTATATGGAGT+TGG 0.529573 8_4:-13244260 Msa1314330:CDS
TGCGTGCCAAGTTAGCAATT+AGG 0.532533 8_4:+13247088 None:intergenic
GAGGGGCATCAGTGTGCTGA+AGG 0.535914 8_4:-13248709 Msa1314330:CDS
ATCCACCTGGCATTAGAGTC+CGG 0.536092 8_4:-13247170 Msa1314330:CDS
AGTGTGCTGAAGGATTGTTT+AGG 0.539602 8_4:-13248699 Msa1314330:CDS
GCAGCTACAAGTCCAGAGAC+AGG 0.540124 8_4:+13247147 None:intergenic
CAAAGGTAACTTGATTCTAT+CGG 0.540277 8_4:+13243827 None:intergenic
TTATGAAGATGACTCGCACT+TGG 0.542374 8_4:-13246152 Msa1314330:CDS
GTCAATGATACCAAAGGGAG+GGG 0.543790 8_4:-13246118 Msa1314330:CDS
AGTCCACCGGTAACAATCCC+CGG 0.546108 8_4:+13248742 None:intergenic
AGGGTTGCAGCAGGAGCCAA+AGG 0.547037 8_4:-13243897 Msa1314330:CDS
GGAATGTAACACTCGGCAAA+GGG 0.548493 8_4:+13244200 None:intergenic
CTCCCAAAGTTCAAGTCCAC+CGG 0.550193 8_4:+13248729 None:intergenic
GTTGCATTTGTACTTTATGG+TGG 0.551687 8_4:-13248906 Msa1314330:CDS
AGGAATGTAACACTCGGCAA+AGG 0.554566 8_4:+13244199 None:intergenic
CTCATGGTTTCCACTAATGG+TGG 0.558410 8_4:-13246860 Msa1314330:CDS
GATGTTATGAGGGTTGCAGC+AGG 0.559067 8_4:-13243906 Msa1314330:CDS
CGCAGGATACTTTGTTTGGG+CGG 0.559130 8_4:-13247112 Msa1314330:CDS
GGTCCTATGCCTGATCCACC+TGG 0.559473 8_4:-13248817 Msa1314330:CDS
ACTAACTTTGTCACCACCAT+CGG 0.561747 8_4:+13244157 None:intergenic
CTTTGATCCGAAGAAGAAAA+GGG 0.562783 8_4:-13249113 Msa1314330:CDS
GCACCAGCTCCAATGGGTGG+TGG 0.563844 8_4:-13246767 Msa1314330:CDS
CGTTACTGGATGGTTCCAAA+AGG 0.564207 8_4:-13243784 Msa1314330:three_prime_UTR
AACAATGTCAATGATACCAA+AGG 0.566328 8_4:-13246124 Msa1314330:CDS
TACCATGATATGGGAGTCGA+GGG 0.566549 8_4:-13245485 Msa1314330:CDS
GAATCAAGTTACCTTTGTGA+GGG 0.567806 8_4:-13243821 Msa1314330:exon
AAAGGGTCAGAACCAGAAAA+GGG 0.569243 8_4:-13249096 Msa1314330:CDS
TTCTTCAATTTCAAACCAGG+TGG 0.569825 8_4:+13248802 None:intergenic
ATTGCTAACTTGGCACGCAT+CGG 0.570105 8_4:-13247084 Msa1314330:CDS
ACAATGTCAATGATACCAAA+GGG 0.570573 8_4:-13246123 Msa1314330:CDS
CCTTGACAATGAAACAGGAA+TGG 0.573628 8_4:-13247193 Msa1314330:CDS
TGGACTGAATACCATGATAT+GGG 0.579168 8_4:-13245494 Msa1314330:CDS
TATGAAGATGACTCGCACTT+GGG 0.579656 8_4:-13246151 Msa1314330:CDS
GCTGCTGACTACTTTGCCGC+AGG 0.579775 8_4:-13247129 Msa1314330:CDS
ACATACTGAGGAAATGAAGC+TGG 0.579803 8_4:+13248856 None:intergenic
GTGTTACAGACCTTCATGCT+GGG 0.580352 8_4:-13247229 Msa1314330:intron
CCCGAGACATTGCTGTTGCA+AGG 0.580720 8_4:-13246640 Msa1314330:intron
ACATAAGTGCGGATCCCTGA+AGG 0.582865 8_4:+13244029 None:intergenic
AGAATCAAGTTACCTTTGTG+AGG 0.584227 8_4:-13243822 Msa1314330:exon
AAACAAGATTCAATCCTTCA+GGG 0.585693 8_4:-13244043 Msa1314330:CDS
GTTGATTGAAGATGTTATGA+GGG 0.588594 8_4:-13243916 Msa1314330:CDS
GTTGAAGCACCAGCTCCAAT+GGG 0.588758 8_4:-13246773 Msa1314330:CDS
ACAGGCCGGACTCTAATGCC+AGG 0.589059 8_4:+13247165 None:intergenic
ATACCTCTTGTCGTGATGTG+TGG 0.589412 8_4:-13245514 Msa1314330:CDS
CAAATTCAGATTGCAGTGAG+TGG 0.590297 8_4:-13243530 Msa1314330:three_prime_UTR
AAACCAGGTGGATCAGGCAT+AGG 0.590698 8_4:+13248814 None:intergenic
GAACCATCCAGTAACGGGAG+AGG 0.591346 8_4:+13243791 None:intergenic
CTACAAGTCCAGAGACAGGC+CGG 0.592056 8_4:+13247151 None:intergenic
GTGGATCCTCTCGATAGTAC+CGG 0.592563 8_4:+13243697 None:intergenic
AAAGTTAGTTGTCTGAAAGA+TGG 0.594243 8_4:-13244143 Msa1314330:CDS
TTATTATTCCACATTCGATG+GGG 0.597825 8_4:-13246826 Msa1314330:CDS
TTCTTACCGGTACTATCGAG+AGG 0.598025 8_4:-13243703 Msa1314330:three_prime_UTR
CACTAATGGTGGAAATAAGG+CGG 0.599508 8_4:-13246849 Msa1314330:CDS
GAAATTGATCCTAATGCCGA+TGG 0.600115 8_4:-13244173 Msa1314330:CDS
AGTCCACACATCACGACAAG+AGG 0.600708 8_4:+13245511 None:intergenic
GCCAACCTGCTAGAAGGTAG+AGG 0.602621 8_4:-13243981 Msa1314330:CDS
ATGTGCTCCACCCAGCATGA+AGG 0.609066 8_4:+13247219 None:intergenic
TGTCAATGATACCAAAGGGA+GGG 0.611058 8_4:-13246119 Msa1314330:CDS
TTCAAAAGGAATGTAACACT+CGG 0.613347 8_4:+13244193 None:intergenic
AAGGCAATTGTAAACATCGG+TGG 0.613847 8_4:-13246713 Msa1314330:CDS
CGGCCTTGATTGGTCACCAG+AGG 0.614675 8_4:-13246082 Msa1314330:CDS
GTGGTGGAGGAGGACCAGAT+TGG 0.615784 8_4:-13246751 Msa1314330:CDS
TATTATTCCACATTCGATGG+GGG 0.616054 8_4:-13246825 Msa1314330:CDS
ATTAAGGCAATTGTAAACAT+CGG 0.616704 8_4:-13246716 Msa1314330:CDS
GGTGGACTTGAACTTTGGGA+GGG 0.617610 8_4:-13248727 Msa1314330:CDS
ATACCATGATATGGGAGTCG+AGG 0.618174 8_4:-13245486 Msa1314330:CDS
TGCGGGATCAAACACTAAGT+CGG 0.618626 8_4:-13246901 Msa1314330:CDS
GAGTGGCGAAACAGGAAGCA+AGG 0.618828 8_4:-13243513 Msa1314330:three_prime_UTR
GCCTGAACTTAGAACTGGAA+CGG 0.623216 8_4:+13244094 None:intergenic
CCTTTAGAGAAATGAAAGAG+TGG 0.625888 8_4:+13243644 None:intergenic
TTGTTTAGGAAGAGATTGTG+GGG 0.629813 8_4:-13248685 Msa1314330:CDS
ATGTGTGCTAAAGGTTGGCG+CGG 0.631669 8_4:-13244068 Msa1314330:CDS
TTTAGGAAGAGATTGTGGGG+TGG 0.635506 8_4:-13248682 Msa1314330:CDS
GTGGACTTGAACTTTGGGAG+GGG 0.645485 8_4:-13248726 Msa1314330:CDS
AATCAAGTTACCTTTGTGAG+GGG 0.646216 8_4:-13243820 Msa1314330:exon
GAAGCACCAGCTCCAATGGG+TGG 0.650096 8_4:-13246770 Msa1314330:CDS
CCTTCTAGCAGGTTGGCTGG+AGG 0.650840 8_4:+13243987 None:intergenic
CGCCCAAACAAAGTATCCTG+CGG 0.650887 8_4:+13247113 None:intergenic
GTGTTCCAAAGGCTATAGCA+GGG 0.651360 8_4:-13246679 Msa1314330:CDS
TTTGAGAGAAGAAATTGATG+GGG 0.652309 8_4:+13249232 None:intergenic
GAAACAGGAATGGATCCACC+TGG 0.653090 8_4:-13247183 Msa1314330:CDS
GAGGAATCCACCCCTCACAA+AGG 0.653487 8_4:+13243810 None:intergenic
TTACAGACCTTCATGCTGGG+TGG 0.657680 8_4:-13247226 Msa1314330:intron
AGAGAAGATTTCCATATCAG+GGG 0.659632 8_4:+13244274 None:intergenic
GGATGGTTCCAAAAGGAGAG+AGG 0.665716 8_4:-13243777 Msa1314330:three_prime_UTR
GTTCCGGGGATTGTTACCGG+TGG 0.668124 8_4:-13248745 Msa1314330:CDS
ATGTCAATGATACCAAAGGG+AGG 0.678379 8_4:-13246120 Msa1314330:CDS
GCCAAAGGAGAAGAATTGGG+AGG 0.678687 8_4:-13243882 Msa1314330:CDS
ATAGCCTCAGTGACATACTG+AGG 0.682133 8_4:+13248844 None:intergenic
TGGTCACCAGAGGAAAGCTG+TGG 0.687949 8_4:-13246072 Msa1314330:CDS
TCACAAGGGCGATTGCACCA+GGG 0.688041 8_4:-13246218 Msa1314330:intron
CATATTCTCGAACATAAGTG+CGG 0.688532 8_4:+13244018 None:intergenic
CATGTTGCAATGTTTGAATG+CGG 0.688558 8_4:+13246175 None:intergenic
GAAGGTAGAGGAACACAAAG+CGG 0.691848 8_4:-13243969 Msa1314330:CDS
TTAAGAAGAAGAGTACTAGG+TGG 0.695244 8_4:-13248960 Msa1314330:CDS
GGCCGGACTCTAATGCCAGG+TGG 0.698938 8_4:+13247168 None:intergenic
ATTCTGCTTTACTCGCAAAG+GGG 0.700342 8_4:+13243673 None:intergenic
ATTGATCCTAATGCCGATGG+TGG 0.700702 8_4:-13244170 Msa1314330:CDS
ATTTCCTCAGTATGTCACTG+AGG 0.706751 8_4:-13248848 Msa1314330:CDS
GCTCCGAAAATGATGGCGCG+TGG 0.724137 8_4:-13245395 Msa1314330:CDS
AATATCATTTCAGAACACTG+AGG 0.773968 8_4:-13247019 Msa1314330:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAATAATAATATTTAT+TGG + chr8_4:13248862-13248881 None:intergenic 0.0%
!!! TATATATTTATAACTTTTCT+TGG - chr8_4:13244466-13244485 Msa1314330:intron 10.0%
!!! TACTAGTATTTAATTTTAAA+TGG - chr8_4:13247713-13247732 Msa1314330:intron 10.0%
!!! ACTAGTATTTAATTTTAAAT+GGG - chr8_4:13247714-13247733 Msa1314330:intron 10.0%
!! ATTCATAATGATTATTTATT+TGG + chr8_4:13248142-13248161 None:intergenic 10.0%
!!! AATAGTATTTATATTTTTCT+TGG + chr8_4:13248228-13248247 None:intergenic 10.0%
!!! TTTTGCTTTTTATTATTTTT+TGG - chr8_4:13249208-13249227 Msa1314330:five_prime_UTR 10.0%
!!! AAAATCAACTTTTTTTTTCT+GGG + chr8_4:13243406-13243425 None:intergenic 15.0%
!!! AAAAATCAACTTTTTTTTTC+TGG + chr8_4:13243407-13243426 None:intergenic 15.0%
!!! TTATTTTTCTCAAGAAATTT+TGG - chr8_4:13243442-13243461 Msa1314330:three_prime_UTR 15.0%
!!! TATTTTTCTCAAGAAATTTT+GGG - chr8_4:13243443-13243462 Msa1314330:three_prime_UTR 15.0%
!! CAAATGTCAAATATATATTT+CGG + chr8_4:13244643-13244662 None:intergenic 15.0%
!! TAATAATAACTTAATTGATC+AGG - chr8_4:13245680-13245699 Msa1314330:intron 15.0%
!! TGTTTGAATTAACTTATTTA+AGG - chr8_4:13246733-13246752 Msa1314330:CDS 15.0%
!! AAATATAAATACTATTCAGT+TGG - chr8_4:13248232-13248251 Msa1314330:intron 15.0%
!! TTGAATAGGTAATAAAAATA+AGG + chr8_4:13248260-13248279 None:intergenic 15.0%
!!! TCTTCTTTTTTCTGAATTTT+TGG + chr8_4:13243553-13243572 None:intergenic 20.0%
!!! TTTTACATTTGATTTGATGA+TGG - chr8_4:13244187-13244206 Msa1314330:CDS 20.0%
!!! ACATTTGATTTGATGATTAT+TGG - chr8_4:13244656-13244675 Msa1314330:intron 20.0%
!!! TGTTAACATGTTTCTATTAT+TGG - chr8_4:13244729-13244748 Msa1314330:intron 20.0%
!!! TCATTTATTTTGTCTGTTAT+TGG - chr8_4:13244862-13244881 Msa1314330:intron 20.0%
!!! ATTTTCTTCATTTCATGAAA+TGG - chr8_4:13245808-13245827 Msa1314330:intron 20.0%
!!! TTTTCTTCATTTCATGAAAT+GGG - chr8_4:13245809-13245828 Msa1314330:intron 20.0%
!! TACAATTGCCTTAATATATT+TGG + chr8_4:13245883-13245902 None:intergenic 20.0%
!! TTCATAGTTTAAACAATAGA+AGG + chr8_4:13246113-13246132 None:intergenic 20.0%
!! TAACATTCTCAAATTATTAC+CGG + chr8_4:13246151-13246170 None:intergenic 20.0%
!! TTCAGTATCTAAATTGAATT+TGG - chr8_4:13246346-13246365 Msa1314330:intron 20.0%
!! AATAAAACAAATGTCAACTA+TGG - chr8_4:13246610-13246629 Msa1314330:intron 20.0%
!! CAAAACTTGAAATTGATATA+GGG - chr8_4:13246708-13246727 Msa1314330:CDS 20.0%
!! TATTTGTAGTGTTCATATTT+AGG + chr8_4:13247278-13247297 None:intergenic 20.0%
!! AATATGAACACTACAAATAT+TGG - chr8_4:13247279-13247298 Msa1314330:intron 20.0%
!! AAATTTCTGAATGAATTCTT+CGG - chr8_4:13247388-13247407 Msa1314330:intron 20.0%
!! TTAATTAAGCACTTATAACT+TGG - chr8_4:13247517-13247536 Msa1314330:intron 20.0%
!! ATCCAAACATATAATTTCTT+TGG - chr8_4:13247740-13247759 Msa1314330:intron 20.0%
!! ATCCAAAGAAATTATATGTT+TGG + chr8_4:13247745-13247764 None:intergenic 20.0%
!! AACATATAATTTCTTTGGAT+TGG - chr8_4:13247745-13247764 Msa1314330:intron 20.0%
!!! TATTTTAACAACTTCAGATA+TGG - chr8_4:13247922-13247941 Msa1314330:intron 20.0%
!!! ATCTGTCTAAAGTTAAATAA+CGG - chr8_4:13247972-13247991 Msa1314330:intron 20.0%
!! CTTATAAATATAAGCTCTTT+CGG + chr8_4:13248378-13248397 None:intergenic 20.0%
!! TGTATTCTGATATCTTTAAA+TGG - chr8_4:13248753-13248772 Msa1314330:CDS 20.0%
!!! AAAACATTAGATTTGTTGTA+TGG - chr8_4:13249121-13249140 Msa1314330:exon 20.0%
!!! TTTGTTGTATGGTAATTTTT+TGG - chr8_4:13249132-13249151 Msa1314330:exon 20.0%
!!! TTTTGAGAGAAGAAATTGAT+GGG + chr8_4:13243376-13243395 None:intergenic 25.0%
!!! TTTTTGAGAGAAGAAATTGA+TGG + chr8_4:13243377-13243396 None:intergenic 25.0%
! AAAGAACAAGAAGAAAAACA+AGG - chr8_4:13243606-13243625 Msa1314330:three_prime_UTR 25.0%
!!! TTTTTAAGAAGAAGAGTACT+AGG - chr8_4:13243641-13243660 Msa1314330:three_prime_UTR 25.0%
!!! CTTTTGGAGAAGTTTATAAA+AGG - chr8_4:13243947-13243966 Msa1314330:CDS 25.0%
! TGTGTATTTATAACTTTGCT+TGG - chr8_4:13243990-13244009 Msa1314330:CDS 25.0%
!! TGTTAGCATGTTTCTATAAT+TGG - chr8_4:13244264-13244283 Msa1314330:CDS 25.0%
!!! TGTGTTTTTATAGTCTTGTT+TGG - chr8_4:13244529-13244548 Msa1314330:intron 25.0%
!! TTGATTTGATGATTATTGGT+TGG - chr8_4:13244660-13244679 Msa1314330:intron 25.0%
! AAGACATTGGAAAAATGATT+TGG - chr8_4:13244754-13244773 Msa1314330:intron 25.0%
!! ATTGGAAAAATGATTTGGAA+GGG - chr8_4:13244759-13244778 Msa1314330:intron 25.0%
! TAAATGAAGATCAGAATCAA+AGG + chr8_4:13244961-13244980 None:intergenic 25.0%
! TTTGATTCTGATCTTCATTT+AGG - chr8_4:13244960-13244979 Msa1314330:intron 25.0%
! ACTGTTCAATTTGAAAGTAA+AGG - chr8_4:13245116-13245135 Msa1314330:intron 25.0%
! CTGTTCAATTTGAAAGTAAA+GGG - chr8_4:13245117-13245136 Msa1314330:intron 25.0%
! GATATTATTTGTCTCACAAA+AGG + chr8_4:13245172-13245191 None:intergenic 25.0%
! AGTGAAAATGATAATCCTAA+CGG - chr8_4:13245221-13245240 Msa1314330:intron 25.0%
! TGAAGAAAAAACTATGTACA+TGG - chr8_4:13245546-13245565 Msa1314330:intron 25.0%
!!! AGTGTTCTGAAATAAAAACT+CGG + chr8_4:13245639-13245658 None:intergenic 25.0%
!! TTGGTGTTCCAAATATATTA+AGG - chr8_4:13245872-13245891 Msa1314330:intron 25.0%
! ATTAAGGCAATTGTAAACAT+CGG - chr8_4:13245888-13245907 Msa1314330:intron 25.0%
!! ATTCTAGCTAGAGTATAATA+CGG + chr8_4:13246059-13246078 None:intergenic 25.0%
! AATTTGTGTTTCCAATTCAA+AGG + chr8_4:13246278-13246297 None:intergenic 25.0%
! GCAAAACTTGAAATTGATAT+AGG - chr8_4:13246707-13246726 Msa1314330:CDS 25.0%
! ACAAGAAAACTGGTAAAATA+AGG + chr8_4:13247002-13247021 None:intergenic 25.0%
!! TGATTTTGAACTCACAAATA+TGG + chr8_4:13247453-13247472 None:intergenic 25.0%
!! AACTGTTTTATAAGCTATAC+TGG - chr8_4:13247626-13247645 Msa1314330:intron 25.0%
! TTTGACAGAAATTATGACTT+TGG - chr8_4:13247820-13247839 Msa1314330:intron 25.0%
! ATCCAAACTGTATGTTTATA+TGG + chr8_4:13247849-13247868 None:intergenic 25.0%
! GTATCTAATAATACTGTGTT+TGG + chr8_4:13248001-13248020 None:intergenic 25.0%
! CTAAATTTCATCATGAATGA+TGG + chr8_4:13248063-13248082 None:intergenic 25.0%
! GAATTTGTGAATATTGACAA+TGG - chr8_4:13248158-13248177 Msa1314330:intron 25.0%
! AAGACATCAATCAATTGAAT+AGG + chr8_4:13248274-13248293 None:intergenic 25.0%
TTTGAGAGAAGAAATTGATG+GGG + chr8_4:13243375-13243394 None:intergenic 30.0%
!! TTGGGTTTGAATCGATTTTA+AGG - chr8_4:13243461-13243480 Msa1314330:three_prime_UTR 30.0%
!! TGAATCGATTTTAAGGACTA+TGG - chr8_4:13243468-13243487 Msa1314330:three_prime_UTR 30.0%
TTGGTTGCATTTGTACTTTA+TGG - chr8_4:13243695-13243714 Msa1314330:three_prime_UTR 30.0%
TCTTTCTTCAATTTCAAACC+AGG + chr8_4:13243808-13243827 None:intergenic 30.0%
! GGTTTGAAATTGAAGAAAGA+AGG - chr8_4:13243808-13243827 Msa1314330:exon 30.0%
ATTGTTTAGGAAGAGATTGT+GGG - chr8_4:13243918-13243937 Msa1314330:CDS 30.0%
TTGTTTGTCGTAATTTGATG+AGG - chr8_4:13244024-13244043 Msa1314330:CDS 30.0%
!! GGTGTTTTTATTGTCTTGTT+TGG - chr8_4:13244052-13244071 Msa1314330:CDS 30.0%
! TCTTGTTTGGTATTGTTTAG+TGG - chr8_4:13244065-13244084 Msa1314330:CDS 30.0%
! TGGTATTGTTTAGTGGTTTT+TGG - chr8_4:13244072-13244091 Msa1314330:CDS 30.0%
!!! TGTTTAGTGGTTTTTGGTAT+TGG - chr8_4:13244078-13244097 Msa1314330:CDS 30.0%
! TGCTGTGATTTGAAATTGAA+TGG - chr8_4:13244119-13244138 Msa1314330:CDS 30.0%
GAAATTGAATGGTTATGATG+AGG - chr8_4:13244130-13244149 Msa1314330:CDS 30.0%
!! ACATTTGATTTGATGATGGT+TGG - chr8_4:13244191-13244210 Msa1314330:CDS 30.0%
!! AAACTTGTCGATTTAATGCT+AGG - chr8_4:13244231-13244250 Msa1314330:CDS 30.0%
! TAGCATGTTTCTATAATTGG+TGG - chr8_4:13244267-13244286 Msa1314330:CDS 30.0%
! AGAAAGCTTGTTCTTATAAG+AGG - chr8_4:13244423-13244442 Msa1314330:intron 30.0%
!!! TCTTGTTTGGTTTTGTTTAG+TGG - chr8_4:13244542-13244561 Msa1314330:intron 30.0%
! TTTGTGAGTGTGTTGTTATT+TGG - chr8_4:13244565-13244584 Msa1314330:intron 30.0%
GGAATTGATTGATTATGATG+AGG - chr8_4:13244586-13244605 Msa1314330:intron 30.0%
TTGATTGATTATGATGAGGA+TGG - chr8_4:13244590-13244609 Msa1314330:intron 30.0%
TCTATTATTGGTGAAGACAT+TGG - chr8_4:13244741-13244760 Msa1314330:intron 30.0%
! CATTGGAAAAATGATTTGGA+AGG - chr8_4:13244758-13244777 Msa1314330:intron 30.0%
! GTCTGTTATTGGATTTTACT+TGG - chr8_4:13244873-13244892 Msa1314330:intron 30.0%
ACAGTGATCTAATATTACAC+AGG + chr8_4:13244927-13244946 None:intergenic 30.0%
GATCAGAATCAAAGGTTTAA+AGG + chr8_4:13244953-13244972 None:intergenic 30.0%
ATTGTGAGTACTTGATTGAT+TGG - chr8_4:13245050-13245069 Msa1314330:intron 30.0%
AATATCATTTCAGAACACTG+AGG - chr8_4:13245585-13245604 Msa1314330:intron 30.0%
ATAACTTAATTGATCAGGTG+CGG - chr8_4:13245685-13245704 Msa1314330:intron 30.0%
AAAAAGCAACATAGAACTCA+TGG - chr8_4:13245728-13245747 Msa1314330:intron 30.0%
GTTATTATTCCACATTCGAT+GGG - chr8_4:13245777-13245796 Msa1314330:intron 30.0%
TTATTATTCCACATTCGATG+GGG - chr8_4:13245778-13245797 Msa1314330:intron 30.0%
! ATATATTTGGAACACCAATC+TGG + chr8_4:13245870-13245889 None:intergenic 30.0%
TGCAAGGTATATCTTCTTTA+TGG - chr8_4:13245980-13245999 Msa1314330:CDS 30.0%
ACACAAATTCTCATTGCATT+TGG - chr8_4:13246289-13246308 Msa1314330:intron 30.0%
TTTCGTGTTATATGTCACAA+GGG - chr8_4:13246372-13246391 Msa1314330:intron 30.0%
ATATCGTTATCTAAAAACCC+TGG + chr8_4:13246406-13246425 None:intergenic 30.0%
AACAATGTCAATGATACCAA+AGG - chr8_4:13246480-13246499 Msa1314330:intron 30.0%
ACAATGTCAATGATACCAAA+GGG - chr8_4:13246481-13246500 Msa1314330:intron 30.0%
TATGGAAGAATGATATCGTT+TGG - chr8_4:13246628-13246647 Msa1314330:intron 30.0%
!! AGATCGATATTGTTGACTTT+CGG - chr8_4:13246680-13246699 Msa1314330:CDS 30.0%
! ACTTATTTAAGGTCATCTAC+CGG - chr8_4:13246744-13246763 Msa1314330:CDS 30.0%
AATTAAGCTGTTTATCCAAC+AGG - chr8_4:13246950-13246969 Msa1314330:intron 30.0%
ATTAAGCTGTTTATCCAACA+GGG - chr8_4:13246951-13246970 Msa1314330:intron 30.0%
CACCATATAAACATACAGTT+TGG - chr8_4:13247844-13247863 Msa1314330:intron 30.0%
! ATCATTATTTTCTCTCACCT+CGG - chr8_4:13247874-13247893 Msa1314330:intron 30.0%
!! GTAGACTAAACTTATTTCTG+AGG + chr8_4:13248025-13248044 None:intergenic 30.0%
! TATTTGGAACATATCAAGAG+TGG + chr8_4:13248126-13248145 None:intergenic 30.0%
ATGGAAATCTTCTCTCTATA+TGG - chr8_4:13248338-13248357 Msa1314330:intron 30.0%
TAAATATAAGCTCTTTCGGT+TGG + chr8_4:13248374-13248393 None:intergenic 30.0%
TTCAAAAGGAATGTAACACT+CGG + chr8_4:13248414-13248433 None:intergenic 30.0%
GCATTAGGATCAATTTCAAA+AGG + chr8_4:13248428-13248447 None:intergenic 30.0%
AAAGTTAGTTGTCTGAAAGA+TGG - chr8_4:13248461-13248480 Msa1314330:intron 30.0%
AAAACAAGATTCAATCCTTC+AGG - chr8_4:13248560-13248579 Msa1314330:intron 30.0%
AAACAAGATTCAATCCTTCA+GGG - chr8_4:13248561-13248580 Msa1314330:intron 30.0%
GTTGATTGAAGATGTTATGA+GGG - chr8_4:13248688-13248707 Msa1314330:CDS 30.0%
CAAAGGTAACTTGATTCTAT+CGG + chr8_4:13248780-13248799 None:intergenic 30.0%
! TGTGTCTATTTCTTTCTTAC+CGG - chr8_4:13248888-13248907 Msa1314330:CDS 30.0%
GTGTGAGTGAGAATTGAAAA+GGG + chr8_4:13243333-13243352 None:intergenic 35.0%
AGTGTGAGTGAGAATTGAAA+AGG + chr8_4:13243334-13243353 None:intergenic 35.0%
CTTTGATCCGAAGAAGAAAA+GGG - chr8_4:13243491-13243510 Msa1314330:three_prime_UTR 35.0%
! TTTTCGCTATTACCCTTTTC+TGG + chr8_4:13243523-13243542 None:intergenic 35.0%
!! TTAAGAAGAAGAGTACTAGG+TGG - chr8_4:13243644-13243663 Msa1314330:three_prime_UTR 35.0%
GTTGCATTTGTACTTTATGG+TGG - chr8_4:13243698-13243717 Msa1314330:three_prime_UTR 35.0%
TTCTTCAATTTCAAACCAGG+TGG + chr8_4:13243805-13243824 None:intergenic 35.0%
GATTGTTTAGGAAGAGATTG+TGG - chr8_4:13243917-13243936 Msa1314330:CDS 35.0%
TTGTTTAGGAAGAGATTGTG+GGG - chr8_4:13243919-13243938 Msa1314330:CDS 35.0%
TATAACTTTGCTTGGTTGTG+TGG - chr8_4:13243998-13244017 Msa1314330:CDS 35.0%
TCGTAATTTGATGAGGTTGA+TGG - chr8_4:13244031-13244050 Msa1314330:CDS 35.0%
TTGAATGGTTATGATGAGGA+TGG - chr8_4:13244134-13244153 Msa1314330:CDS 35.0%
!! TTTGATTTGATGATGGTTGG+TGG - chr8_4:13244194-13244213 Msa1314330:CDS 35.0%
!! TTGATTTGATGATGGTTGGT+GGG - chr8_4:13244195-13244214 Msa1314330:CDS 35.0%
! ACACTGGTAAATGATTTGGA+AGG - chr8_4:13244292-13244311 Msa1314330:intron 35.0%
! CACTGGTAAATGATTTGGAA+GGG - chr8_4:13244293-13244312 Msa1314330:intron 35.0%
! GGAAGGGAACTTATGTTTTA+TGG - chr8_4:13244309-13244328 Msa1314330:intron 35.0%
! TATGGTATTGTTGCTTGAGA+TGG - chr8_4:13244327-13244346 Msa1314330:intron 35.0%
GATGGTTAATTCTTGCTCTT+TGG - chr8_4:13244345-13244364 Msa1314330:intron 35.0%
ATTATGATGAGGATGGTGAT+TGG - chr8_4:13244597-13244616 Msa1314330:intron 35.0%
!! ACACTTGTCGATTTAATGCT+AGG - chr8_4:13244696-13244715 Msa1314330:intron 35.0%
TCGATTTAATGCTAGGTTGT+TGG - chr8_4:13244238-13244257 Msa1314330:CDS 35.0%
GATAATGTGATTGCTTGAGA+TGG - chr8_4:13244809-13244828 Msa1314330:intron 35.0%
!! ATTTTTGCTTTCTGCTGACT+TGG - chr8_4:13244835-13244854 Msa1314330:intron 35.0%
TTTCCATGTACATTTGTGAG+TGG - chr8_4:13245089-13245108 Msa1314330:intron 35.0%
GACAAATATTGCACTAGTGA+TGG + chr8_4:13245278-13245297 None:intergenic 35.0%
ACCATTTCTACGTCTATGAT+GGG + chr8_4:13245328-13245347 None:intergenic 35.0%
TACCATTTCTACGTCTATGA+TGG + chr8_4:13245329-13245348 None:intergenic 35.0%
GGTCTGTAACACACAAAAAT+AGG + chr8_4:13245367-13245386 None:intergenic 35.0%
CATTCCTGTTTCATTGTCAA+GGG + chr8_4:13245413-13245432 None:intergenic 35.0%
TAACTTAATTGATCAGGTGC+GGG - chr8_4:13245686-13245705 Msa1314330:intron 35.0%
! TTCCACTAATGGTGGAAATA+AGG - chr8_4:13245752-13245771 Msa1314330:intron 35.0%
GGTTATTATTCCACATTCGA+TGG - chr8_4:13245776-13245795 Msa1314330:intron 35.0%
TATTATTCCACATTCGATGG+GGG - chr8_4:13245779-13245798 Msa1314330:intron 35.0%
!!! ACCATTTTTAGGTGTTCCAA+AGG - chr8_4:13245914-13245933 Msa1314330:intron 35.0%
ATGTAACCTAGTAACTAGCA+TGG + chr8_4:13246006-13246025 None:intergenic 35.0%
! AGGTTACATGATGACTTGTA+TGG - chr8_4:13246017-13246036 Msa1314330:CDS 35.0%
! GGTTACATGATGACTTGTAT+GGG - chr8_4:13246018-13246037 Msa1314330:CDS 35.0%
AAGATCTCTCTCCTTTGAAT+TGG - chr8_4:13246264-13246283 Msa1314330:intron 35.0%
CTTTCGTGTTATATGTCACA+AGG - chr8_4:13246371-13246390 Msa1314330:intron 35.0%
CATGTTGCAATGTTTGAATG+CGG + chr8_4:13246432-13246451 None:intergenic 35.0%
!! GATCGATATTGTTGACTTTC+GGG - chr8_4:13246681-13246700 Msa1314330:CDS 35.0%
TAAGCACACAAGACAATACA+GGG + chr8_4:13246977-13246996 None:intergenic 35.0%
ATAAGCACACAAGACAATAC+AGG + chr8_4:13246978-13246997 None:intergenic 35.0%
AATGGACAGAACAAGAAAAC+TGG + chr8_4:13247012-13247031 None:intergenic 35.0%
TCCATTTATACTTGACACTC+AGG - chr8_4:13247026-13247045 Msa1314330:CDS 35.0%
ACCTGAGTGTCAAGTATAAA+TGG + chr8_4:13247030-13247049 None:intergenic 35.0%
! ACACTCAGGTTTTTGTTAAC+AGG - chr8_4:13247040-13247059 Msa1314330:CDS 35.0%
! CACTCAGGTTTTTGTTAACA+GGG - chr8_4:13247041-13247060 Msa1314330:CDS 35.0%
TTGTTAACAGGGTGCAATTA+AGG - chr8_4:13247052-13247071 Msa1314330:CDS 35.0%
TGTTAACAGGGTGCAATTAA+GGG - chr8_4:13247053-13247072 Msa1314330:CDS 35.0%
!! CAAGAGGTATTTGCAACATT+GGG + chr8_4:13247080-13247099 None:intergenic 35.0%
!! ACAAGAGGTATTTGCAACAT+TGG + chr8_4:13247081-13247100 None:intergenic 35.0%
TGGACTGAATACCATGATAT+GGG - chr8_4:13247110-13247129 Msa1314330:CDS 35.0%
GAACATAAAGTTTACACAGC+TGG - chr8_4:13247158-13247177 Msa1314330:CDS 35.0%
GGTAGTGATCATTTCTCTTA+TGG - chr8_4:13247230-13247249 Msa1314330:intron 35.0%
CAAATATTGGTCAAACCCAT+TGG - chr8_4:13247292-13247311 Msa1314330:intron 35.0%
AATCTCACTTTGTCTCCAAT+GGG + chr8_4:13247310-13247329 None:intergenic 35.0%
AAATCTCACTTTGTCTCCAA+TGG + chr8_4:13247311-13247330 None:intergenic 35.0%
TTTCTGAATGAATTCTTCGG+TGG - chr8_4:13247391-13247410 Msa1314330:intron 35.0%
CATTCGTTGACGATACTTAT+AGG - chr8_4:13247475-13247494 Msa1314330:intron 35.0%
GATACTTATAGGCTCTGTTT+AGG - chr8_4:13247486-13247505 Msa1314330:intron 35.0%
ATACTAGTATAAGCGCTTGT+GGG + chr8_4:13247702-13247721 None:intergenic 35.0%
AATACTAGTATAAGCGCTTG+TGG + chr8_4:13247703-13247722 None:intergenic 35.0%
AACAACTTCAGATATGGTGT+TGG - chr8_4:13247928-13247947 Msa1314330:intron 35.0%
AGAGAAGATTTCCATATCAG+GGG + chr8_4:13248333-13248352 None:intergenic 35.0%
GAGAGAAGATTTCCATATCA+GGG + chr8_4:13248334-13248353 None:intergenic 35.0%
AGAGAGAAGATTTCCATATC+AGG + chr8_4:13248335-13248354 None:intergenic 35.0%
ATCTTCTCTCTATATGGAGT+TGG - chr8_4:13248344-13248363 Msa1314330:intron 35.0%
CATATTCTCGAACATAAGTG+CGG + chr8_4:13248589-13248608 None:intergenic 35.0%
GGTGCTCATGTTGATATAAT+GGG - chr8_4:13248656-13248675 Msa1314330:intron 35.0%
! CGTTGATTGAAGATGTTATG+AGG - chr8_4:13248687-13248706 Msa1314330:CDS 35.0%
AGAATCAAGTTACCTTTGTG+AGG - chr8_4:13248782-13248801 Msa1314330:CDS 35.0%
GAATCAAGTTACCTTTGTGA+GGG - chr8_4:13248783-13248802 Msa1314330:CDS 35.0%
AATCAAGTTACCTTTGTGAG+GGG - chr8_4:13248784-13248803 Msa1314330:CDS 35.0%
! CCTTTAGAGAAATGAAAGAG+TGG + chr8_4:13248963-13248982 None:intergenic 35.0%
CCACTCTTTCATTTCTCTAA+AGG - chr8_4:13248960-13248979 Msa1314330:CDS 35.0%
GAAATTCTGAGTGCATCTTA+TGG + chr8_4:13249041-13249060 None:intergenic 35.0%
TAAGATGCACTCAGAATTTC+TGG - chr8_4:13249041-13249060 Msa1314330:CDS 35.0%
CATATTTGTCAGATGCTTCA+TGG - chr8_4:13249159-13249178 Msa1314330:five_prime_UTR 35.0%
GCTTTGATCCGAAGAAGAAA+AGG - chr8_4:13243490-13243509 Msa1314330:three_prime_UTR 40.0%
! GTTCTGACCCTTTTCTTCTT+CGG + chr8_4:13243501-13243520 None:intergenic 40.0%
AAAAGGGTCAGAACCAGAAA+AGG - chr8_4:13243507-13243526 Msa1314330:three_prime_UTR 40.0%
AAAGGGTCAGAACCAGAAAA+GGG - chr8_4:13243508-13243527 Msa1314330:three_prime_UTR 40.0%
CAAGAAGAAAAACAAGGACG+AGG - chr8_4:13243612-13243631 Msa1314330:three_prime_UTR 40.0%
! CTTGTGTTGACAGTTGTTGT+TGG - chr8_4:13243668-13243687 Msa1314330:three_prime_UTR 40.0%
!! GACAGTTGTTGTTGGTTTGT+TGG - chr8_4:13243676-13243695 Msa1314330:three_prime_UTR 40.0%
ACATACTGAGGAAATGAAGC+TGG + chr8_4:13243751-13243770 None:intergenic 40.0%
ATTTCCTCAGTATGTCACTG+AGG - chr8_4:13243756-13243775 Msa1314330:three_prime_UTR 40.0%
TATGTCACTGAGGCTATAAC+TGG - chr8_4:13243766-13243785 Msa1314330:three_prime_UTR 40.0%
AATTTCAAACCAGGTGGATC+AGG + chr8_4:13243799-13243818 None:intergenic 40.0%
!!! GCATCCAGTTGTTTTTGTTC+CGG - chr8_4:13243843-13243862 Msa1314330:CDS 40.0%
!!! CATCCAGTTGTTTTTGTTCC+GGG - chr8_4:13243844-13243863 Msa1314330:CDS 40.0%
!!! ATCCAGTTGTTTTTGTTCCG+GGG - chr8_4:13243845-13243864 Msa1314330:CDS 40.0%
AGTGTGCTGAAGGATTGTTT+AGG - chr8_4:13243905-13243924 Msa1314330:CDS 40.0%
TCTATAATTGGTGGAGACAC+TGG - chr8_4:13244276-13244295 Msa1314330:CDS 40.0%
GGAGACACTGGTAAATGATT+TGG - chr8_4:13244288-13244307 Msa1314330:CDS 40.0%
! ATTCTTGCTCTTTGGAGACT+TGG - chr8_4:13244353-13244372 Msa1314330:intron 40.0%
!! TTATTGGTTGGTGAGCTGTT+TGG - chr8_4:13244672-13244691 Msa1314330:intron 40.0%
! GAACACCTCTTTTGTGGTAT+TGG - chr8_4:13244781-13244800 Msa1314330:intron 40.0%
AAGCACCAATACCACAAAAG+AGG + chr8_4:13244789-13244808 None:intergenic 40.0%
CTTCCACTCACAAATGTACA+TGG + chr8_4:13245095-13245114 None:intergenic 40.0%
! ACTGCGTTATAAGCCTTATC+TGG + chr8_4:13245252-13245271 None:intergenic 40.0%
TCCCATCATAGACGTAGAAA+TGG - chr8_4:13245324-13245343 Msa1314330:CDS 40.0%
ATGTCCCTTGACAATGAAAC+AGG - chr8_4:13245406-13245425 Msa1314330:CDS 40.0%
CCATTCCTGTTTCATTGTCA+AGG + chr8_4:13245414-13245433 None:intergenic 40.0%
CCTTGACAATGAAACAGGAA+TGG - chr8_4:13245411-13245430 Msa1314330:CDS 40.0%
TGTACATGGCTGCATATGAT+TGG - chr8_4:13245560-13245579 Msa1314330:intron 40.0%
GAACTCATGGTTTCCACTAA+TGG - chr8_4:13245741-13245760 Msa1314330:intron 40.0%
! CACTAATGGTGGAAATAAGG+CGG - chr8_4:13245755-13245774 Msa1314330:intron 40.0%
AAGGCAATTGTAAACATCGG+TGG - chr8_4:13245891-13245910 Msa1314330:intron 40.0%
!! AACATCGGTGGACCATTTTT+AGG - chr8_4:13245903-13245922 Msa1314330:intron 40.0%
!! GCCTTTGGAACACCTAAAAA+TGG + chr8_4:13245918-13245937 None:intergenic 40.0%
TTATGGCCATGCTAGTTACT+AGG - chr8_4:13245997-13246016 Msa1314330:CDS 40.0%
GAGTATAATACGGTTGAACC+AGG + chr8_4:13246049-13246068 None:intergenic 40.0%
TTATGAAGATGACTCGCACT+TGG - chr8_4:13246452-13246471 Msa1314330:intron 40.0%
TATGAAGATGACTCGCACTT+GGG - chr8_4:13246453-13246472 Msa1314330:intron 40.0%
ATGTCAATGATACCAAAGGG+AGG - chr8_4:13246484-13246503 Msa1314330:intron 40.0%
TGTCAATGATACCAAAGGGA+GGG - chr8_4:13246485-13246504 Msa1314330:intron 40.0%
TGCTTTGCTTTCTTGTGTGA+AGG + chr8_4:13246558-13246577 None:intergenic 40.0%
AGTCTCACAAGTGCTTATAC+CGG + chr8_4:13246766-13246785 None:intergenic 40.0%
AAGCTATCATGAAGAGCTTG+TGG + chr8_4:13246813-13246832 None:intergenic 40.0%
! GTGGACTGAATACCATGATA+TGG - chr8_4:13247109-13247128 Msa1314330:CDS 40.0%
! GTTTGTTGCTCCGAAAATGA+TGG - chr8_4:13247202-13247221 Msa1314330:CDS 40.0%
AAGCTATACTGGAGAGCTTA+TGG - chr8_4:13247637-13247656 Msa1314330:intron 40.0%
GGATTGTGTGAGATAGCTTA+TGG + chr8_4:13247681-13247700 None:intergenic 40.0%
!! CTTTGGATTGGCGTTGAAAA+AGG - chr8_4:13247757-13247776 Msa1314330:intron 40.0%
! TTATTTTCTCTCACCTCGGA+TGG - chr8_4:13247878-13247897 Msa1314330:intron 40.0%
GCTAGTAAATATTCCATCCG+AGG + chr8_4:13247894-13247913 None:intergenic 40.0%
TTGGAAAGATGATGACCTGA+GGG + chr8_4:13248209-13248228 None:intergenic 40.0%
!! ATTTCCATATCAGGGGCATT+TGG + chr8_4:13248326-13248345 None:intergenic 40.0%
TATAAGCTCTTTCGGTTGGT+AGG + chr8_4:13248370-13248389 None:intergenic 40.0%
GAAATTGATCCTAATGCCGA+TGG - chr8_4:13248431-13248450 Msa1314330:intron 40.0%
ACTAACTTTGTCACCACCAT+CGG + chr8_4:13248450-13248469 None:intergenic 40.0%
ATGTAGCCTGAACTTAGAAC+TGG + chr8_4:13248518-13248537 None:intergenic 40.0%
CGGTGCTCATGTTGATATAA+TGG - chr8_4:13248655-13248674 Msa1314330:intron 40.0%
AGAAGAATTGGGAGGTGATA+AGG - chr8_4:13248730-13248749 Msa1314330:CDS 40.0%
!!! TTTTGGAACCATCCAGTAAC+GGG + chr8_4:13248821-13248840 None:intergenic 40.0%
!!! CTTTTGGAACCATCCAGTAA+CGG + chr8_4:13248822-13248841 None:intergenic 40.0%
ATTCTGCTTTACTCGCAAAG+GGG + chr8_4:13248934-13248953 None:intergenic 40.0%
CATTCTGCTTTACTCGCAAA+GGG + chr8_4:13248935-13248954 None:intergenic 40.0%
CAAATTCAGATTGCAGTGAG+TGG - chr8_4:13249074-13249093 Msa1314330:CDS 40.0%
ATAGCCTCAGTGACATACTG+AGG + chr8_4:13243763-13243782 None:intergenic 45.0%
ATCCCCGGAACAAAAACAAC+TGG + chr8_4:13243850-13243869 None:intergenic 45.0%
TTTGTTCCGGGGATTGTTAC+CGG - chr8_4:13243856-13243875 Msa1314330:CDS 45.0%
! TTACCGGTGGACTTGAACTT+TGG - chr8_4:13243872-13243891 Msa1314330:CDS 45.0%
! TACCGGTGGACTTGAACTTT+GGG - chr8_4:13243873-13243892 Msa1314330:CDS 45.0%
TTTAGGAAGAGATTGTGGGG+TGG - chr8_4:13243922-13243941 Msa1314330:CDS 45.0%
TTAGGAAGAGATTGTGGGGT+GGG - chr8_4:13243923-13243942 Msa1314330:CDS 45.0%
CCTTATCTGGACAATCCGTT+AGG + chr8_4:13245239-13245258 None:intergenic 45.0%
!! CCTAACGGATTGTCCAGATA+AGG - chr8_4:13245236-13245255 Msa1314330:intron 45.0%
TGTGTTACAGACCTTCATGC+TGG - chr8_4:13245374-13245393 Msa1314330:CDS 45.0%
GTGTTACAGACCTTCATGCT+GGG - chr8_4:13245375-13245394 Msa1314330:CDS 45.0%
TTGCCGCAGGATACTTTGTT+TGG - chr8_4:13245488-13245507 Msa1314330:CDS 45.0%
! TGCCGCAGGATACTTTGTTT+GGG - chr8_4:13245489-13245508 Msa1314330:CDS 45.0%
TGCGTGCCAAGTTAGCAATT+AGG + chr8_4:13245519-13245538 None:intergenic 45.0%
ATTGCTAACTTGGCACGCAT+CGG - chr8_4:13245520-13245539 Msa1314330:CDS 45.0%
TGCGGGATCAAACACTAAGT+CGG - chr8_4:13245703-13245722 Msa1314330:intron 45.0%
CTCATGGTTTCCACTAATGG+TGG - chr8_4:13245744-13245763 Msa1314330:intron 45.0%
!! CGCCTTATTTCCACCATTAG+TGG + chr8_4:13245757-13245776 None:intergenic 45.0%
TACAAAACCCCCATCGAATG+TGG + chr8_4:13245789-13245808 None:intergenic 45.0%
GTGTTCCAAAGGCTATAGCA+GGG - chr8_4:13245925-13245944 Msa1314330:intron 45.0%
AAAAGCCCTGCTATAGCCTT+TGG + chr8_4:13245933-13245952 None:intergenic 45.0%
ACCTTGCAACAGCAATGTCT+CGG + chr8_4:13245968-13245987 None:intergenic 45.0%
GTGTTTGACACTGACACAAG+CGG + chr8_4:13246174-13246193 None:intergenic 45.0%
GTCAATGATACCAAAGGGAG+GGG - chr8_4:13246486-13246505 Msa1314330:intron 45.0%
TTTCCTCTGGTGACCAATCA+AGG + chr8_4:13246528-13246547 None:intergenic 45.0%
ATACCTCTTGTCGTGATGTG+TGG - chr8_4:13247090-13247109 Msa1314330:CDS 45.0%
ATACCATGATATGGGAGTCG+AGG - chr8_4:13247118-13247137 Msa1314330:CDS 45.0%
TACCATGATATGGGAGTCGA+GGG - chr8_4:13247119-13247138 Msa1314330:CDS 45.0%
GGAACATATCAAGAGTGGAG+AGG + chr8_4:13248121-13248140 None:intergenic 45.0%
CTTGGAAAGATGATGACCTG+AGG + chr8_4:13248210-13248229 None:intergenic 45.0%
GTTACCAAATGCCCCTGATA+TGG - chr8_4:13248319-13248338 Msa1314330:intron 45.0%
GGAATGTAACACTCGGCAAA+GGG + chr8_4:13248407-13248426 None:intergenic 45.0%
AGGAATGTAACACTCGGCAA+AGG + chr8_4:13248408-13248427 None:intergenic 45.0%
ATTGATCCTAATGCCGATGG+TGG - chr8_4:13248434-13248453 Msa1314330:intron 45.0%
GATGGTGTCTACACTGTTGA+TGG - chr8_4:13248479-13248498 Msa1314330:intron 45.0%
!! ACCGTTCCAGTTCTAAGTTC+AGG - chr8_4:13248509-13248528 Msa1314330:intron 45.0%
GCCTGAACTTAGAACTGGAA+CGG + chr8_4:13248513-13248532 None:intergenic 45.0%
TCAGGCTACATGTGTGCTAA+AGG - chr8_4:13248527-13248546 Msa1314330:intron 45.0%
GCTACATGTGTGCTAAAGGT+TGG - chr8_4:13248531-13248550 Msa1314330:intron 45.0%
GAAGGTAGAGGAACACAAAG+CGG - chr8_4:13248635-13248654 Msa1314330:intron 45.0%
AGGAGCCAAAGGAGAAGAAT+TGG - chr8_4:13248718-13248737 Msa1314330:CDS 45.0%
GGAGCCAAAGGAGAAGAATT+GGG - chr8_4:13248719-13248738 Msa1314330:CDS 45.0%
ACCTCCCAATTCTTCTCCTT+TGG + chr8_4:13248726-13248745 None:intergenic 45.0%
CGTTACTGGATGGTTCCAAA+AGG - chr8_4:13248820-13248839 Msa1314330:CDS 45.0%
TTCTTACCGGTACTATCGAG+AGG - chr8_4:13248901-13248920 Msa1314330:CDS 45.0%
GCATTCTGCTTTACTCGCAA+AGG + chr8_4:13248936-13248955 None:intergenic 45.0%
AAACCAGGTGGATCAGGCAT+AGG + chr8_4:13243793-13243812 None:intergenic 50.0%
CTCCCAAAGTTCAAGTCCAC+CGG + chr8_4:13243878-13243897 None:intergenic 50.0%
! GGTGGACTTGAACTTTGGGA+GGG - chr8_4:13243877-13243896 Msa1314330:CDS 50.0%
! GTGGACTTGAACTTTGGGAG+GGG - chr8_4:13243878-13243897 Msa1314330:CDS 50.0%
! AGATTGTGGGGTGGGACTTT+TGG - chr8_4:13243931-13243950 Msa1314330:CDS 50.0%
! GGAAGGGAACACCTCTTTTG+TGG - chr8_4:13244775-13244794 Msa1314330:intron 50.0%
TTACAGACCTTCATGCTGGG+TGG - chr8_4:13245378-13245397 Msa1314330:CDS 50.0%
GAAACAGGAATGGATCCACC+TGG - chr8_4:13245421-13245440 Msa1314330:CDS 50.0%
ATCCACCTGGCATTAGAGTC+CGG - chr8_4:13245434-13245453 Msa1314330:CDS 50.0%
! CGCCCAAACAAAGTATCCTG+CGG + chr8_4:13245494-13245513 None:intergenic 50.0%
! CGCAGGATACTTTGTTTGGG+CGG - chr8_4:13245492-13245511 Msa1314330:CDS 50.0%
GGCGGTCCTAATTGCTAACT+TGG - chr8_4:13245510-13245529 Msa1314330:CDS 50.0%
! GTTGAAGCACCAGCTCCAAT+GGG - chr8_4:13245831-13245850 Msa1314330:intron 50.0%
GGTGTTCCAAAGGCTATAGC+AGG - chr8_4:13245924-13245943 Msa1314330:intron 50.0%
CCTTGCAACAGCAATGTCTC+GGG + chr8_4:13245967-13245986 None:intergenic 50.0%
! TGACTTGTATGGGTGTAGCC+TGG - chr8_4:13246028-13246047 Msa1314330:CDS 50.0%
!! TGAAGCACTGACACAGACAC+CGG - chr8_4:13246129-13246148 Msa1314330:CDS 50.0%
!! ACTTCAGGTTGAAGGCGTGT+CGG + chr8_4:13246196-13246215 None:intergenic 50.0%
ACGCCTTCAACCTGAAGTGT+CGG - chr8_4:13246198-13246217 Msa1314330:CDS 50.0%
AAAGGGAGGGGACACCATAT+GGG - chr8_4:13246498-13246517 Msa1314330:intron 50.0%
AAGACAATACAGGGCCCTGT+TGG + chr8_4:13246968-13246987 None:intergenic 50.0%
AGTCCACACATCACGACAAG+AGG + chr8_4:13247096-13247115 None:intergenic 50.0%
TCGGAGCAACAAACTGAAGC+AGG + chr8_4:13247196-13247215 None:intergenic 50.0%
! CTACCACGCGCCATCATTTT+CGG + chr8_4:13247215-13247234 None:intergenic 50.0%
AGTTGAGTACTTGAGCCCTC+AGG - chr8_4:13248191-13248210 Msa1314330:intron 50.0%
TTGTCACCACCATCGGCATT+AGG + chr8_4:13248443-13248462 None:intergenic 50.0%
ATGTGTGCTAAAGGTTGGCG+CGG - chr8_4:13248536-13248555 Msa1314330:intron 50.0%
ACATAAGTGCGGATCCCTGA+AGG + chr8_4:13248578-13248597 None:intergenic 50.0%
TCCTCTACCTTCTAGCAGGT+TGG + chr8_4:13248627-13248646 None:intergenic 50.0%
GTGTTCCTCTACCTTCTAGC+AGG + chr8_4:13248631-13248650 None:intergenic 50.0%
GATGTTATGAGGGTTGCAGC+AGG - chr8_4:13248698-13248717 Msa1314330:CDS 50.0%
GCCAAAGGAGAAGAATTGGG+AGG - chr8_4:13248722-13248741 Msa1314330:CDS 50.0%
CAAGTTACCTTTGTGAGGGG+TGG - chr8_4:13248787-13248806 Msa1314330:CDS 50.0%
ATTCCTCTCCCGTTACTGGA+TGG - chr8_4:13248810-13248829 Msa1314330:CDS 50.0%
GGATGGTTCCAAAAGGAGAG+AGG - chr8_4:13248827-13248846 Msa1314330:CDS 50.0%
! TGCGTCTTCCTCTCTCCTTT+TGG + chr8_4:13248838-13248857 None:intergenic 50.0%
GTGGATCCTCTCGATAGTAC+CGG + chr8_4:13248910-13248929 None:intergenic 50.0%
ATTGCAGTGAGTGGCGAAAC+AGG - chr8_4:13249083-13249102 Msa1314330:CDS 50.0%
AGTCCACCGGTAACAATCCC+CGG + chr8_4:13243865-13243884 None:intergenic 55.0%
! CGGTGGACTTGAACTTTGGG+AGG - chr8_4:13243876-13243895 Msa1314330:CDS 55.0%
ATGTGCTCCACCCAGCATGA+AGG + chr8_4:13245388-13245407 None:intergenic 55.0%
ATTAGAGTCCGGCCTGTCTC+TGG - chr8_4:13245445-13245464 Msa1314330:CDS 55.0%
CTACAAGTCCAGAGACAGGC+CGG + chr8_4:13245456-13245475 None:intergenic 55.0%
GCAGCTACAAGTCCAGAGAC+AGG + chr8_4:13245460-13245479 None:intergenic 55.0%
! GGTTGAAGCACCAGCTCCAA+TGG - chr8_4:13245830-13245849 Msa1314330:intron 55.0%
! CCCGAGACATTGCTGTTGCA+AGG - chr8_4:13245964-13245983 Msa1314330:intron 55.0%
!! GCACCGACACTTCAGGTTGA+AGG + chr8_4:13246204-13246223 None:intergenic 55.0%
!! CTATGCAGCACCGACACTTC+AGG + chr8_4:13246211-13246230 None:intergenic 55.0%
TCACAAGGGCGATTGCACCA+GGG - chr8_4:13246386-13246405 Msa1314330:intron 55.0%
CATATGGTGTCCCCTCCCTT+TGG + chr8_4:13246499-13246518 None:intergenic 55.0%
CAAAGGGAGGGGACACCATA+TGG - chr8_4:13246497-13246516 Msa1314330:intron 55.0%
AAGGGAGGGGACACCATATG+GGG - chr8_4:13246499-13246518 Msa1314330:intron 55.0%
TGGTCACCAGAGGAAAGCTG+TGG - chr8_4:13246532-13246551 Msa1314330:intron 55.0%
TGAAGGCCACAGCTTTCCTC+TGG + chr8_4:13246541-13246560 None:intergenic 55.0%
GTTTGGCAAAGCTGTCGCAG+AGG - chr8_4:13246645-13246664 Msa1314330:CDS 55.0%
CTCCCTCGACTCCCATATCA+TGG + chr8_4:13247124-13247143 None:intergenic 55.0%
! CTACCTTCTAGCAGGTTGGC+TGG + chr8_4:13248623-13248642 None:intergenic 55.0%
GCCAACCTGCTAGAAGGTAG+AGG - chr8_4:13248623-13248642 Msa1314330:intron 55.0%
GAGGAATCCACCCCTCACAA+AGG + chr8_4:13248797-13248816 None:intergenic 55.0%
GTGGATTCCTCTCCCGTTAC+TGG - chr8_4:13248806-13248825 Msa1314330:CDS 55.0%
! GAACCATCCAGTAACGGGAG+AGG + chr8_4:13248816-13248835 None:intergenic 55.0%
GCTTTACTCGCAAAGGGGTG+TGG + chr8_4:13248929-13248948 None:intergenic 55.0%
GAGTGGCGAAACAGGAAGCA+AGG - chr8_4:13249091-13249110 Msa1314330:CDS 55.0%
GGTCCTATGCCTGATCCACC+TGG - chr8_4:13243787-13243806 Msa1314330:three_prime_UTR 60.0%
GTTCCGGGGATTGTTACCGG+TGG - chr8_4:13243859-13243878 Msa1314330:CDS 60.0%
!! GAGGGGCATCAGTGTGCTGA+AGG - chr8_4:13243895-13243914 Msa1314330:CDS 60.0%
!! TGGTTGGTGGGTGAGCTGCT+CGG - chr8_4:13244207-13244226 Msa1314330:CDS 60.0%
ACAGGCCGGACTCTAATGCC+AGG + chr8_4:13245442-13245461 None:intergenic 60.0%
! GCTGCTGACTACTTTGCCGC+AGG - chr8_4:13245475-13245494 Msa1314330:CDS 60.0%
! GAAGCACCAGCTCCAATGGG+TGG - chr8_4:13245834-13245853 Msa1314330:intron 60.0%
! GTGGTGGAGGAGGACCAGAT+TGG - chr8_4:13245853-13245872 Msa1314330:intron 60.0%
GTCACAAGGGCGATTGCACC+AGG - chr8_4:13246385-13246404 Msa1314330:intron 60.0%
CCAATCAAGGCCGCCCCATA+TGG + chr8_4:13246515-13246534 None:intergenic 60.0%
CCATATGGGGCGGCCTTGAT+TGG - chr8_4:13246512-13246531 Msa1314330:intron 60.0%
! CGGCCTTGATTGGTCACCAG+AGG - chr8_4:13246522-13246541 Msa1314330:intron 60.0%
! GCTCCGAAAATGATGGCGCG+TGG - chr8_4:13247209-13247228 Msa1314330:CDS 60.0%
! CCTTCTAGCAGGTTGGCTGG+AGG + chr8_4:13248620-13248639 None:intergenic 60.0%
CCTCCAGCCAACCTGCTAGA+AGG - chr8_4:13248617-13248636 Msa1314330:intron 60.0%
AGGGTTGCAGCAGGAGCCAA+AGG - chr8_4:13248707-13248726 Msa1314330:CDS 60.0%
GGCCGGACTCTAATGCCAGG+TGG + chr8_4:13245439-13245458 None:intergenic 65.0%
GCACCAGCTCCAATGGGTGG+TGG - chr8_4:13245837-13245856 Msa1314330:intron 65.0%
CCTCCACCACCCATTGGAGC+TGG + chr8_4:13245843-13245862 None:intergenic 65.0%
! CCAGCTCCAATGGGTGGTGG+AGG - chr8_4:13245840-13245859 Msa1314330:intron 65.0%
!! GCTCCAATGGGTGGTGGAGG+AGG - chr8_4:13245843-13245862 Msa1314330:intron 65.0%
GGTCCTCCTCCACCACCCAT+TGG + chr8_4:13245849-13245868 None:intergenic 65.0%
GGAGGGGACACCATATGGGG+CGG - chr8_4:13246502-13246521 Msa1314330:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 13243311 13249315 13243311 ID=Msa1314330;Name=Msa1314330
chr8_4 mRNA 13243311 13249315 13243311 ID=Msa1314330-mRNA-1;Parent=Msa1314330;Name=Msa1314330-mRNA-1;_AED=0.02;_eAED=0.02;_QI=176|0.8|0.83|1|1|1|6|513|665
chr8_4 exon 13243311 13244307 13243311 ID=Msa1314330-mRNA-1:exon:4945;Parent=Msa1314330-mRNA-1
chr8_4 exon 13245305 13245564 13245305 ID=Msa1314330-mRNA-1:exon:4944;Parent=Msa1314330-mRNA-1
chr8_4 exon 13245969 13246233 13245969 ID=Msa1314330-mRNA-1:exon:4943;Parent=Msa1314330-mRNA-1
chr8_4 exon 13246641 13246924 13246641 ID=Msa1314330-mRNA-1:exon:4942;Parent=Msa1314330-mRNA-1
chr8_4 exon 13247020 13247242 13247020 ID=Msa1314330-mRNA-1:exon:4941;Parent=Msa1314330-mRNA-1
chr8_4 exon 13248658 13249315 13248658 ID=Msa1314330-mRNA-1:exon:4940;Parent=Msa1314330-mRNA-1
chr8_4 five_prime_UTR 13249140 13249315 13249140 ID=Msa1314330-mRNA-1:five_prime_utr;Parent=Msa1314330-mRNA-1
chr8_4 CDS 13248658 13249139 13248658 ID=Msa1314330-mRNA-1:cds;Parent=Msa1314330-mRNA-1
chr8_4 CDS 13247020 13247242 13247020 ID=Msa1314330-mRNA-1:cds;Parent=Msa1314330-mRNA-1
chr8_4 CDS 13246641 13246924 13246641 ID=Msa1314330-mRNA-1:cds;Parent=Msa1314330-mRNA-1
chr8_4 CDS 13245969 13246233 13245969 ID=Msa1314330-mRNA-1:cds;Parent=Msa1314330-mRNA-1
chr8_4 CDS 13245305 13245564 13245305 ID=Msa1314330-mRNA-1:cds;Parent=Msa1314330-mRNA-1
chr8_4 CDS 13243824 13244307 13243824 ID=Msa1314330-mRNA-1:cds;Parent=Msa1314330-mRNA-1
chr8_4 three_prime_UTR 13243311 13243823 13243311 ID=Msa1314330-mRNA-1:three_prime_utr;Parent=Msa1314330-mRNA-1
Gene Sequence

>Msa1314330

ATGGCTTTGATCCGAAGAAGAAAAGGGTCAGAACCAGAAAAGGGTAATAGCGAAAATTCAGAACCAAAAATTCAGAAAAAAGAAGAAGAAGAAGAAGATGATGATAATGATAAGAACAAAAAGAACAAGAAGAAAAACAAGGACGAGGTTGCTGTTTTTAAGAAGAAGAGTACTAGGTGGTCTTGTGTTGACAGTTGTTGTTGGTTTGTTGGTTGCATTTGTACTTTATGGTGGTTTTTGTTGTTTATGTACAATGTAATGCCAGCTTCATTTCCTCAGTATGTCACTGAGGCTATAACTGGTCCTATGCCTGATCCACCTGGTTTGAAATTGAAGAAAGAAGGATTGAGTGTGAAGCATCCAGTTGTTTTTGTTCCGGGGATTGTTACCGGTGGACTTGAACTTTGGGAGGGGCATCAGTGTGCTGAAGGATTGTTTAGGAAGAGATTGTGGGGTGGGACTTTTGGAGAAGTTTATAAAAGACCTTCATGCTGGGTGGAGCACATGTCCCTTGACAATGAAACAGGAATGGATCCACCTGGCATTAGAGTCCGGCCTGTCTCTGGACTTGTAGCTGCTGACTACTTTGCCGCAGGATACTTTGTTTGGGCGGTCCTAATTGCTAACTTGGCACGCATCGGTTATGAAGAAAAAACTATGTACATGGCTGCATATGATTGGAGAATATCATTTCAGAACACTGAGGTGCGGGATCAAACACTAAGTCGGATAAAAAGCAACATAGAACTCATGGTTTCCACTAATGGTGGAAATAAGGCGGTTATTATTCCACATTCGATGGGGGTTTTGTATTTTCTTCATTTCATGAAATGGGTTGAAGCACCAGCTCCAATGGGTGGTGGAGGAGGACCAGATTGGTGTTCCAAATATATTAAGGCAATTGTAAACATCGGTGGACCATTTTTAGGTGTTCCAAAGGCTATAGCAGGGCTTTTCTCAGCTGAAGCCCGAGACATTGCTGTTGCAAGGGCGATTGCACCAGGGTTTTTAGATAACGATATGTTCCGCATTCAAACATTGCAACATGTTATGAAGATGACTCGCACTTGGGACTCAACAATGTCAATGATACCAAAGGGAGGGGACACCATATGGGGCGGCCTTGATTGGTCACCAGAGGAAAGCTGTGGCCTTCACACAAGAAAGCAAAGCAGCAACAATACTCAGTTGACAGAACAAAAGACAAATAAAACAAATGTCAACTATGGAAGAATGATATCGTTTGGCAAAGCTGGTGCAATTAAGGGTCCCAATGTTGCAAATACCTCTTGTCGTGATGTGTGGACTGAATACCATGATATGGGAGTCGAGGGAGTAAGAGCAGTTGCAGAACATAAAGTTTACACAGCTGGCTCAATCATAGACCTGCTTCAGTTTGTTGCTCCGAAAATGATGGCGCGTGGTAGTGATCATTTCTCTTATGGAGTAGCTGACAATTTAGATGATCCTAAATATGAACACTACAAATATTGGTCAAACCCATTGGAGACAAAGTTACCAAATGCCCCTGATATGGAAATCTTCTCTCTATATGGAGTTGGCCTACCAACCGAAAGAGCTTATATTTATAAGTTAACTCCCTTTGCCGAGTGTTACATTCCTTTTGAAATTGATCCTAATGCCGATGGTGGTGACAAAGTTAGTTGTCTGAAAGATGGTGTCTACACTGTTGATGGTGATGAGACCGTTCCAGTTCTAAGTTCAGGCTACATGTGTGCTAAAGGTTGGCGCGGAAAAACAAGATTCAATCCTTCAGGGATCCGCACTTATGTTCGAGAATATGATCATTCTCCTCCAGCCAACCTGCTAGAAGGTAGAGGAACACAAAGCGGTGCTCATGTTGATATAATGGGAAACTTTGCGTTGATTGAAGATGTTATGAGGGTTGCAGCAGGAGCCAAAGGAGAAGAATTGGGAGGTGATAAGGTGTATTCTGATATCTTTAAATGGTCCGATAGAATCAAGTTACCTTTGTGA
Protein sequence

>Msa1314330

MALIRRRKGSEPEKGNSENSEPKIQKKEEEEEDDDNDKNKKNKKKNKDEVAVFKKKSTRWSCVDSCCWFVGCICTLWWFLLFMYNVMPASFPQYVTEAITGPMPDPPGLKLKKEGLSVKHPVVFVPGIVTGGLELWEGHQCAEGLFRKRLWGGTFGEVYKRPSCWVEHMSLDNETGMDPPGIRVRPVSGLVAADYFAAGYFVWAVLIANLARIGYEEKTMYMAAYDWRISFQNTEVRDQTLSRIKSNIELMVSTNGGNKAVIIPHSMGVLYFLHFMKWVEAPAPMGGGGGPDWCSKYIKAIVNIGGPFLGVPKAIAGLFSAEARDIAVARAIAPGFLDNDMFRIQTLQHVMKMTRTWDSTMSMIPKGGDTIWGGLDWSPEESCGLHTRKQSSNNTQLTEQKTNKTNVNYGRMISFGKAGAIKGPNVANTSCRDVWTEYHDMGVEGVRAVAEHKVYTAGSIIDLLQFVAPKMMARGSDHFSYGVADNLDDPKYEHYKYWSNPLETKLPNAPDMEIFSLYGVGLPTERAYIYKLTPFAECYIPFEIDPNADGGDKVSCLKDGVYTVDGDETVPVLSSGYMCAKGWRGKTRFNPSGIRTYVREYDHSPPANLLEGRGTQSGAHVDIMGNFALIEDVMRVAAGAKGEELGGDKVYSDIFKWSDRIKLPL*