AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0008350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0008350 MtrunA17_Chr1g0147311 85.671 328 42 2 335 659 31 356 0.0 578
Msa0008350 MtrunA17_Chr1g0147311 74.176 182 9 1 204 347 173 354 3.73e-78 253
Msa0008350 MtrunA17_Chr1g0147311 80.132 151 20 1 2 142 192 342 5.51e-75 244
Msa0008350 MtrunA17_Chr1g0147311 77.419 62 12 1 142 203 40 99 1.38e-24 105
Msa0008350 MtrunA17_Chr1g0147301 87.456 287 34 1 373 659 1 285 2.42e-180 513
Msa0008350 MtrunA17_Chr1g0147301 73.626 182 10 1 204 347 102 283 2.22e-78 251
Msa0008350 MtrunA17_Chr1g0147301 78.146 151 23 1 2 142 121 271 1.50e-74 241
Msa0008350 MtrunA17_Chr1g0147291 86.567 268 31 2 393 659 4 267 1.25e-164 472
Msa0008350 MtrunA17_Chr1g0147291 73.626 182 10 1 204 347 84 265 3.64e-79 252
Msa0008350 MtrunA17_Chr1g0147291 79.470 151 21 1 2 142 103 253 1.06e-75 243
Msa0008350 MtrunA17_Chr1g0146631 70.552 326 90 4 335 659 5 325 5.13e-157 455
Msa0008350 MtrunA17_Chr1g0146631 47.097 310 60 3 142 347 14 323 3.33e-79 254
Msa0008350 MtrunA17_Chr1g0146631 80.667 150 20 1 2 142 162 311 1.29e-75 245
Msa0008350 MtrunA17_Chr1g0147331 72.171 327 83 5 335 659 5 325 1.08e-156 454
Msa0008350 MtrunA17_Chr1g0147331 80.667 150 20 1 2 142 162 311 1.81e-75 244
Msa0008350 MtrunA17_Chr1g0147331 59.116 181 37 1 204 347 143 323 2.31e-60 205
Msa0008350 MtrunA17_Chr1g0147331 75.806 62 15 0 142 203 14 75 6.71e-17 82.4
Msa0008350 MtrunA17_Chr1g0147321 88.596 228 22 1 431 658 14 237 5.90e-145 421
Msa0008350 MtrunA17_Chr1g0147321 73.889 180 9 1 204 345 55 234 2.60e-79 252
Msa0008350 MtrunA17_Chr1g0147321 78.808 151 22 1 2 142 74 224 1.62e-75 242
Msa0008350 MtrunA17_Chr1g0147271 61.126 373 81 6 347 659 17 385 6.63e-142 419
Msa0008350 MtrunA17_Chr1g0147271 90.132 152 5 1 1 142 220 371 6.95e-85 271
Msa0008350 MtrunA17_Chr1g0147271 63.187 182 29 1 204 347 202 383 3.00e-64 217
Msa0008350 MtrunA17_Chr1g0147271 57.895 57 21 2 142 198 14 67 8.23e-11 64.3
Msa0008350 MtrunA17_Chr1g0147261 59.509 326 103 6 334 659 4 300 7.40e-128 379
Msa0008350 MtrunA17_Chr1g0147261 72.000 150 32 2 2 142 138 286 5.61e-65 216
Msa0008350 MtrunA17_Chr1g0147261 45.070 284 75 5 142 345 14 296 1.31e-64 215
Msa0008350 MtrunA17_Chr1g0147241 62.136 309 100 6 352 659 21 313 4.79e-125 373
Msa0008350 MtrunA17_Chr1g0147241 76.000 150 26 2 2 142 151 299 8.13e-69 227
Msa0008350 MtrunA17_Chr1g0147241 56.983 179 41 1 203 345 131 309 9.66e-56 192
Msa0008350 MtrunA17_Chr1g0147251 66.803 244 74 3 416 659 7 243 1.23e-110 333
Msa0008350 MtrunA17_Chr1g0147251 67.333 150 39 2 2 142 81 229 2.12e-59 199
Msa0008350 MtrunA17_Chr1g0147251 51.813 193 55 2 189 345 49 239 2.80e-53 183
Msa0008350 MtrunA17_Chr3g0139431 51.064 329 143 8 333 657 6 320 7.38e-108 329
Msa0008350 MtrunA17_Chr3g0139431 59.211 152 49 3 2 140 155 306 1.38e-52 184
Msa0008350 MtrunA17_Chr3g0139431 43.784 185 63 2 204 347 136 320 2.72e-40 150
Msa0008350 MtrunA17_Chr4g0034821 42.411 224 123 5 440 659 71 292 7.09e-52 181
Msa0008350 MtrunA17_Chr4g0034821 44.079 152 72 4 1 139 124 275 2.29e-30 121
Msa0008350 MtrunA17_Chr4g0034821 33.333 183 81 3 206 347 108 290 1.09e-22 99.0
Msa0008350 MtrunA17_Chr3g0144451 40.625 224 127 5 440 659 55 276 9.87e-48 169
Msa0008350 MtrunA17_Chr3g0144451 44.079 152 72 3 1 139 108 259 4.43e-31 123
Msa0008350 MtrunA17_Chr3g0144451 32.432 185 84 2 204 347 90 274 4.37e-22 97.1
Msa0008350 MtrunA17_Chr3g0138231 40.625 224 127 4 440 659 46 267 2.37e-47 168
Msa0008350 MtrunA17_Chr3g0138231 46.711 152 68 4 1 139 99 250 4.46e-33 128
Msa0008350 MtrunA17_Chr3g0138231 32.787 183 82 1 206 347 83 265 1.17e-23 101
Msa0008350 MtrunA17_Chr3g0144421 41.176 221 123 5 441 657 84 301 3.45e-47 169
Msa0008350 MtrunA17_Chr3g0144421 37.126 167 87 5 1 155 136 296 5.39e-27 112
Msa0008350 MtrunA17_Chr3g0144421 30.851 188 90 2 204 351 118 305 6.93e-22 97.1
Msa0008350 MtrunA17_Chr3g0144391 40.000 220 119 6 444 657 292 504 5.36e-41 156
Msa0008350 MtrunA17_Chr3g0144391 37.419 155 84 4 1 142 338 492 1.56e-23 104
Msa0008350 MtrunA17_Chr3g0144411 40.455 220 118 6 444 657 325 537 5.75e-41 157
Msa0008350 MtrunA17_Chr3g0144411 37.419 155 84 4 1 142 371 525 1.35e-23 105
Msa0008350 MtrunA17_Chr3g0144411 31.282 195 88 4 204 357 353 542 7.10e-20 93.6
Msa0008350 MtrunA17_Chr4g0034451 38.462 221 123 7 444 657 311 525 1.59e-39 152
Msa0008350 MtrunA17_Chr4g0034451 33.553 152 87 4 1 138 357 508 2.19e-22 101
Msa0008350 MtrunA17_Chr4g0034731 37.118 229 131 8 436 657 209 431 6.13e-36 140
Msa0008350 MtrunA17_Chr4g0034731 34.211 152 86 4 1 138 263 414 1.29e-21 98.2
Msa0008350 MtrunA17_Chr4g0034731 31.351 185 84 4 206 347 247 431 6.97e-20 92.8
Msa0008350 MtrunA17_Chr8g0355861 31.667 300 135 11 359 657 29 259 1.68e-34 132
Msa0008350 MtrunA17_Chr8g0355861 42.446 139 71 3 19 151 121 256 1.65e-28 115
Msa0008350 MtrunA17_Chr8g0355311 46.528 144 70 4 514 657 53 189 2.51e-34 129
Msa0008350 MtrunA17_Chr8g0355311 43.262 141 70 4 21 154 53 190 3.01e-29 115
Msa0008350 MtrunA17_Chr4g0034691 37.104 221 126 7 444 657 493 707 9.47e-34 137
Msa0008350 MtrunA17_Chr4g0034691 34.211 152 86 4 1 138 539 690 1.77e-20 96.3
Msa0008350 MtrunA17_Chr4g0034721 35.455 220 131 6 444 657 361 575 2.43e-33 135
Msa0008350 MtrunA17_Chr4g0034721 33.553 152 87 3 1 138 407 558 1.70e-20 95.9
Msa0008350 MtrunA17_Chr2g0318901 28.526 312 151 9 347 657 18 258 2.50e-33 129
Msa0008350 MtrunA17_Chr2g0318901 40.667 150 72 5 27 170 128 266 1.40e-24 103
Msa0008350 MtrunA17_Chr8g0355871 35.200 250 131 10 409 657 2 221 5.67e-31 121
Msa0008350 MtrunA17_Chr8g0355871 42.537 134 67 4 28 154 92 222 1.77e-24 102
Msa0008350 MtrunA17_Chr8g0365361 34.685 222 130 6 444 658 181 394 6.78e-31 125
Msa0008350 MtrunA17_Chr8g0365361 38.816 152 80 4 1 140 229 379 6.36e-24 104
Msa0008350 MtrunA17_Chr8g0365361 32.143 168 75 3 209 337 216 383 1.75e-17 85.1
Msa0008350 MtrunA17_Chr1g0168781 28.981 314 148 8 347 657 17 258 3.76e-30 120
Msa0008350 MtrunA17_Chr1g0168781 38.194 144 78 6 21 156 121 261 2.14e-20 91.7
Msa0008350 MtrunA17_Chr1g0168781 27.917 240 128 7 142 339 14 250 2.84e-17 82.4
Msa0008350 MtrunA17_Chr8g0355331 40.667 150 82 4 508 657 278 420 2.01e-29 121
Msa0008350 MtrunA17_Chr8g0355331 39.456 147 79 4 15 154 278 421 4.36e-26 111
Msa0008350 MtrunA17_Chr8g0355331 28.270 237 119 6 147 350 205 423 8.06e-15 77.4
Msa0008350 MtrunA17_Chr8g0355321 43.796 137 70 4 521 657 172 301 2.27e-29 118
Msa0008350 MtrunA17_Chr8g0355321 43.284 134 66 4 28 154 172 302 4.07e-26 109
Msa0008350 MtrunA17_Chr2g0318871 26.923 312 156 9 347 657 18 258 3.85e-29 117
Msa0008350 MtrunA17_Chr2g0318871 37.333 150 77 5 27 170 128 266 3.35e-21 94.0
Msa0008350 MtrunA17_Chr2g0318871 26.449 276 150 10 128 353 1 273 5.71e-16 78.6
Msa0008350 MtrunA17_Chr8g0355841 45.255 137 68 4 521 657 379 508 5.06e-29 121
Msa0008350 MtrunA17_Chr8g0355841 41.007 139 76 3 21 154 372 509 3.62e-24 107
Msa0008350 MtrunA17_Chr8g0355841 29.327 208 102 5 176 339 294 500 4.24e-15 78.6
Msa0008350 MtrunA17_Chr3g0117791 34.737 190 119 3 472 658 439 626 1.00e-28 121
Msa0008350 MtrunA17_Chr3g0117791 37.333 150 83 4 2 140 462 611 1.45e-21 99.4
Msa0008350 MtrunA17_Chr3g0117791 28.333 180 90 3 204 344 443 622 3.18e-14 76.3
Msa0008350 MtrunA17_Chr2g0318931 28.274 336 166 13 326 657 5 269 2.42e-28 115
Msa0008350 MtrunA17_Chr2g0318931 36.232 138 76 5 28 156 138 272 1.81e-20 92.0
Msa0008350 MtrunA17_Chr5g0413591 32.273 220 136 6 444 657 415 627 3.56e-28 120
Msa0008350 MtrunA17_Chr5g0413591 35.099 151 87 4 1 140 463 613 6.06e-22 100
Msa0008350 MtrunA17_Chr8g0355831 30.347 346 171 13 359 657 28 350 4.06e-28 116
Msa0008350 MtrunA17_Chr8g0355831 39.860 143 76 4 19 154 212 351 6.30e-23 101
Msa0008350 MtrunA17_Chr8g0365401 34.375 192 117 4 472 658 438 625 6.01e-28 119
Msa0008350 MtrunA17_Chr8g0365401 36.842 152 83 4 1 140 460 610 3.70e-22 101
Msa0008350 MtrunA17_Chr8g0365381 33.484 221 134 6 444 658 429 642 1.92e-27 117
Msa0008350 MtrunA17_Chr8g0365381 35.762 151 86 4 1 140 477 627 5.00e-21 97.8
Msa0008350 MtrunA17_Chr6g0485051 32.308 195 124 6 472 659 13 206 4.84e-27 109
Msa0008350 MtrunA17_Chr6g0485051 32.450 151 87 5 1 136 35 185 4.78e-18 83.2
Msa0008350 MtrunA17_Chr1g0147231 65.060 83 26 2 429 511 51 130 2.86e-24 99.4
Msa0008350 MtrunA17_Chr5g0412981 25.063 395 217 10 2 344 39 406 4.36e-24 105
Msa0008350 MtrunA17_Chr5g0412981 30.180 222 144 7 442 658 195 410 9.19e-22 98.2
Msa0008350 MtrunA17_Chr5g0412981 30.460 174 114 5 471 640 14 184 3.60e-14 75.1
Msa0008350 MtrunA17_Chr5g0412991 24.810 395 218 10 2 344 39 406 1.02e-23 104
Msa0008350 MtrunA17_Chr5g0412991 30.180 222 144 7 442 658 195 410 1.06e-21 98.2
Msa0008350 MtrunA17_Chr5g0412991 30.460 174 114 5 471 640 14 184 6.71e-15 77.4
Msa0008350 MtrunA17_Chr4g0076231 33.548 155 99 3 505 656 3 156 1.33e-23 97.8
Msa0008350 MtrunA17_Chr4g0076231 34.752 141 80 2 12 140 3 143 5.37e-22 93.2
Msa0008350 MtrunA17_Chr5g0412951 31.771 192 120 6 471 656 21 207 8.70e-20 88.6
Msa0008350 MtrunA17_Chr5g0412951 30.201 149 94 3 2 140 46 194 1.80e-13 70.1
Msa0008350 MtrunA17_Chr1g0147281 70.213 47 14 0 142 188 14 60 1.26e-16 75.1
Msa0008350 MtrunA17_Chr1g0147281 68.182 44 14 0 337 380 7 50 1.99e-14 68.9
Msa0008350 MtrunA17_Chr8g0371951 41.333 75 40 2 69 140 10 83 3.62e-15 71.2
Msa0008350 MtrunA17_Chr8g0371951 38.462 78 46 1 572 647 10 87 1.39e-14 69.7
Msa0008350 MtrunA17_Chr4g0034051 40.789 76 42 3 585 657 3 78 1.23e-13 67.0
Msa0008350 MtrunA17_Chr4g0034051 45.763 59 30 2 82 138 3 61 7.61e-11 58.9
Msa0008350 MtrunA17_Chr5g0413021 30.769 130 88 2 530 658 1 129 1.17e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0008350 AT5G25610.1 54.852 237 104 3 424 658 156 391 6.28e-83 267
Msa0008350 AT5G25610.1 59.477 153 49 3 2 142 227 378 2.85e-50 180
Msa0008350 AT5G25610.1 45.026 191 65 4 194 345 199 388 1.80e-40 152
Msa0008350 AT1G49320.1 37.872 235 129 7 437 659 51 280 1.97e-41 152
Msa0008350 AT1G49320.1 36.478 159 83 5 2 142 108 266 1.96e-23 101
Msa0008350 AT1G49320.1 29.630 189 85 4 206 347 91 278 2.72e-20 92.0
Msa0008350 AT1G60390.1 36.126 191 111 4 472 656 435 620 2.50e-29 124
Msa0008350 AT1G60390.1 36.774 155 83 4 1 142 457 609 1.67e-22 102
Msa0008350 AT1G70370.2 35.789 190 115 3 472 657 437 623 7.12e-29 122
Msa0008350 AT1G70370.2 35.762 151 86 3 1 140 459 609 3.86e-21 98.6
Msa0008350 AT1G70370.1 35.789 190 115 3 472 657 437 623 7.12e-29 122
Msa0008350 AT1G70370.1 35.762 151 86 3 1 140 459 609 3.86e-21 98.6
Msa0008350 AT1G23760.1 33.158 190 120 3 472 657 433 619 2.54e-25 111
Msa0008350 AT1G23760.1 34.641 153 85 4 1 140 455 605 7.85e-19 91.3

Find 118 sgRNAs with CRISPR-Local

Find 1027 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATTACCACCTCAACTTTAC+TGG 0.237355 1_1:+12038477 Msa0008350:CDS
TCATGAAAAGCATAATATTT+AGG 0.243591 1_1:-12031233 None:intergenic
TTCTTCTGTTCCTTCTTTGA+TGG 0.265021 1_1:-12022064 None:intergenic
GGCAAAAGGTGTGAAGAAAT+TGG 0.273962 1_1:+12022269 Msa0008350:intron
CCCACAGGATCATGTTGTTT+GGG 0.282262 1_1:+12039991 Msa0008350:CDS
TATTTCCACCTCAATATTAC+TGG 0.282925 1_1:+12029722 Msa0008350:CDS
TCCCACAGGATCATGTTGTT+TGG 0.287622 1_1:+12039990 Msa0008350:CDS
TGTAACATCATTGGAATCTA+TGG 0.289874 1_1:+12030929 Msa0008350:CDS
TGTAACATCATTGGAATCTA+TGG 0.289874 1_1:+12039622 Msa0008350:CDS
TTCCTTTGATCCTTCTTTGA+TGG 0.296396 1_1:-12030838 None:intergenic
ACTTGAAAAGCCAAATGTTT+AGG 0.303666 1_1:-12022459 None:intergenic
AGCGAAAGGAGTGAAGAAAT+TGG 0.308147 1_1:+12039736 Msa0008350:CDS
TGTGACATCATTGGAATCTA+TGG 0.323363 1_1:+12022155 Msa0008350:CDS
ACATGAAAAGCCAAATGTTT+AGG 0.329357 1_1:-12039926 None:intergenic
GTTTACTCTGTGCCTTTAGA+AGG 0.341971 1_1:+12039842 Msa0008350:CDS
AGCAGATTAGTGATGGCTTT+TGG 0.347892 1_1:-12038527 None:intergenic
ATAAGTGAGTGTGAAGAAAA+TGG 0.348496 1_1:+12022108 Msa0008350:CDS
GTGCCTTTGGAAGGTGTTGA+TGG 0.355685 1_1:+12022384 Msa0008350:CDS
AAAGCTTTGTGTAACATCAT+TGG 0.359569 1_1:+12030920 Msa0008350:CDS
AAAGCTTTGTGTAACATCAT+TGG 0.359569 1_1:+12039613 Msa0008350:CDS
CCCAATTTGTTTGATGAAAA+CGG 0.362717 1_1:-12039488 None:intergenic
ACAATGGAATCCTAAACATT+TGG 0.370419 1_1:+12022449 Msa0008350:CDS
TCCAATTTGTTTGATGAAAA+CGG 0.380076 1_1:-12030795 None:intergenic
TAAAGTTTACTCTGTGCCTT+TGG 0.380290 1_1:+12022371 Msa0008350:CDS
GAGACAATTTCAAATAATAA+TGG 0.380547 1_1:+12039428 Msa0008350:CDS
AGAATGGAATCCTAAACATT+TGG 0.396886 1_1:+12039916 Msa0008350:CDS
CATTGGAGAGTTGGGAAGAA+TGG 0.397053 1_1:-12029749 None:intergenic
AAAGCTTTGTGTGACATCAT+TGG 0.404983 1_1:+12022146 Msa0008350:CDS
TGTGGGAGGATGTGACAAAT+AGG 0.415624 1_1:-12031281 None:intergenic
GTGCCCTTGGAATGTGTTGA+TGG 0.426115 1_1:+12031158 Msa0008350:CDS
GTGCCTTTAGAAGGTGTTGA+TGG 0.428425 1_1:+12039851 Msa0008350:CDS
GCGAAAGGAGTGAAGAAATT+GGG 0.430969 1_1:+12039737 Msa0008350:CDS
GCAAAAGGTGTGAAGAAATT+GGG 0.438714 1_1:+12022270 Msa0008350:intron
GGCGTTTGGCATTGGAGAGT+TGG 0.440633 1_1:-12029758 None:intergenic
GGAAAATAAAAGAAAATCAA+TGG 0.442500 1_1:-12039302 None:intergenic
TCAGTAATGGCGTTTGGCAT+TGG 0.445871 1_1:-12029766 None:intergenic
GCGTTTGGCATTGGAGAGTT+GGG 0.456862 1_1:-12029757 None:intergenic
GATTTCACTACTTCGAAACT+TGG 0.458312 1_1:+12022180 Msa0008350:CDS
TTTGTTTGATGAAAACGGTA+TGG 0.466409 1_1:-12030790 None:intergenic
TTTGTTTGATGAAAACGGTA+TGG 0.466409 1_1:-12039483 None:intergenic
TGAAGTTTACTCTGTGCCCT+TGG 0.470084 1_1:+12031145 Msa0008350:CDS
GTAGATGTTGGAGTCAGAAA+AGG 0.471539 1_1:+12030540 Msa0008350:CDS
CAAGTGCTCAAAGTTCAACC+TGG 0.472763 1_1:+12022477 Msa0008350:CDS
TGTGGGAGGATGTGACAAAC+AGG 0.479805 1_1:-12039974 None:intergenic
CATGAGCTTAAAGTTCAACC+TGG 0.481587 1_1:+12031251 Msa0008350:CDS
CATGTGCTTAAAGTTCAACC+TGG 0.481622 1_1:+12039944 Msa0008350:CDS
TCAAATGTAGGTTATGCAAG+TGG 0.490374 1_1:+12038439 Msa0008350:intron
GTATATGCTAGACTCAGAAA+AGG 0.493912 1_1:+12039236 Msa0008350:CDS
CATTGGAGAGTTGGGAAGCA+TGG 0.499468 1_1:-12038504 None:intergenic
AAAGAGAAAGCAACATCGTC+GGG 0.500668 1_1:+12039197 Msa0008350:CDS
AGAAGATCAGTAATGGCGTT+TGG 0.503945 1_1:-12029772 None:intergenic
TAGATGTTGGAGTCAGAAAA+GGG 0.510160 1_1:+12030541 Msa0008350:CDS
TAAAGAGAAAGCAACAATGA+TGG 0.512703 1_1:+12030500 Msa0008350:CDS
ATAAGTGAGTGTGAAGCAAA+TGG 0.512865 1_1:+12030882 Msa0008350:CDS
TGAAGCTGTTTCAACAGAAG+TGG 0.514087 1_1:+12030986 Msa0008350:CDS
GTTTACTCTGTGCCTTTGGA+AGG 0.519063 1_1:+12022375 Msa0008350:CDS
ATAAGTGCGTGTGAAGCAAA+TGG 0.521218 1_1:+12039575 Msa0008350:CDS
TTTCCATCAACACCTTCTAA+AGG 0.525243 1_1:-12039854 None:intergenic
TCAATTGCAGCTTGTGCTAG+TGG 0.525904 1_1:+12029684 Msa0008350:intron
AGCAAGGGTGGTGTAGATGT+TGG 0.526950 1_1:+12030528 Msa0008350:CDS
AACTATTGCTGTTTGTCACA+CGG 0.528318 1_1:+12031193 Msa0008350:CDS
AACATCGTCGGGTGTAAGCA+AGG 0.528353 1_1:+12039208 Msa0008350:CDS
TGTGAAGAAAATGGCATCAA+AGG 0.529052 1_1:+12022117 Msa0008350:CDS
TTCCATCAAAGAAGGATCAA+AGG 0.534638 1_1:+12030836 Msa0008350:CDS
AACATGTTCTCCATCAAAGA+AGG 0.536136 1_1:+12022054 None:intergenic
TTTCATCAAGGAAGGATCAA+AGG 0.537356 1_1:+12039529 Msa0008350:CDS
ATGGAATTAGCAACTTCTCT+AGG 0.538536 1_1:-12039464 None:intergenic
AACAATGATGGATGTAAGCA+AGG 0.541571 1_1:+12030512 Msa0008350:CDS
TGACAAACTGGAACAGTCCC+AGG 0.541759 1_1:-12022495 None:intergenic
AGACTCAGAAAAGGGTATGA+AGG 0.544582 1_1:+12039245 Msa0008350:CDS
GATTTCACTATTTCGAAACT+CGG 0.550412 1_1:+12030954 Msa0008350:CDS
GATTTCACTATTTCGAAACT+CGG 0.550412 1_1:+12039647 Msa0008350:CDS
GTTTCCATCAACACATTCCA+AGG 0.553414 1_1:-12031162 None:intergenic
CAATTGCAGCTTGTGCTAGT+GGG 0.557438 1_1:+12029685 Msa0008350:intron
TGAATTTGACTCTCATTGAG+TGG 0.564721 1_1:-12039323 None:intergenic
TGTTTGTCACATCCTCCCAC+AGG 0.566659 1_1:+12039976 Msa0008350:CDS
TGACAAACAGGAACAGTCCC+AGG 0.575599 1_1:-12039962 None:intergenic
CAACAATATGTAATAGCGAA+AGG 0.576041 1_1:+12039722 Msa0008350:CDS
ATGGACTTCCAGTAATATTG+AGG 0.577030 1_1:-12029730 None:intergenic
AGAAGGTGTTGATGGAAACA+TGG 0.579517 1_1:+12039859 Msa0008350:CDS
TATATGCTAGACTCAGAAAA+GGG 0.581776 1_1:+12039237 Msa0008350:CDS
TATTTGTCACATCCTCCCAC+AGG 0.593098 1_1:+12031283 Msa0008350:CDS
TGTGAAGCAAATGGCATCAA+AGG 0.593813 1_1:+12030891 Msa0008350:CDS
GACTTCCAGTAAAGTTGAGG+TGG 0.598732 1_1:-12038482 None:intergenic
ACCCAAACAACATGATCCTG+TGG 0.601894 1_1:-12031299 None:intergenic
ACCCAAACAACATGATCCTG+TGG 0.601894 1_1:-12039992 None:intergenic
TGACAAATAGGAACAGTCCC+AGG 0.602087 1_1:-12031269 None:intergenic
AGAAAAGGGTATGAAGGAGG+TGG 0.607188 1_1:+12039251 Msa0008350:CDS
TAAAGAGAAAGCAACATCGT+CGG 0.609210 1_1:+12039196 Msa0008350:CDS
ATGAGCTTAAAGTTCAACCT+GGG 0.610401 1_1:+12031252 Msa0008350:CDS
AAGTGCTCAAAGTTCAACCT+GGG 0.613750 1_1:+12022478 Msa0008350:CDS
GTCACACGGATACATCAGAA+TGG 0.617221 1_1:+12031207 Msa0008350:CDS
GTCACACTGATACATCAGAA+TGG 0.617221 1_1:+12039900 Msa0008350:CDS
TGTGAAGCAAATGGCATCAA+AGG 0.617294 1_1:+12039584 Msa0008350:CDS
CAAATGTAGGTTATGCAAGT+GGG 0.617920 1_1:+12038440 Msa0008350:intron
ATGTGCTTAAAGTTCAACCT+GGG 0.618907 1_1:+12039945 Msa0008350:CDS
ATGGACTTCCAGTAAAGTTG+AGG 0.622928 1_1:-12038485 None:intergenic
AGGGTGTAGCAGATTAGTGA+TGG 0.623388 1_1:-12038534 None:intergenic
GACTTCCAGTAATATTGAGG+TGG 0.625464 1_1:-12029727 None:intergenic
ACAATGATGGATGTAAGCAA+GGG 0.630059 1_1:+12030513 Msa0008350:CDS
TCGTCGGGTGTAAGCAAGGG+TGG 0.632884 1_1:+12039212 Msa0008350:CDS
ACATCGTCGGGTGTAAGCAA+GGG 0.635334 1_1:+12039209 Msa0008350:CDS
AGGGTGTAGAAGATCAGTAA+TGG 0.639550 1_1:-12029779 None:intergenic
AGCAAATGGCATCAAAGGTG+AGG 0.640005 1_1:+12030896 Msa0008350:CDS
AGCAAATGGCATCAAAGGTG+AGG 0.640005 1_1:+12039589 Msa0008350:CDS
AGAAAATGGCATCAAAGGAG+AGG 0.642414 1_1:+12022122 Msa0008350:CDS
CTCAGAAAAGGGTATGAAGG+AGG 0.645442 1_1:+12039248 Msa0008350:CDS
CCCAAACAACATGATCCTGT+GGG 0.646890 1_1:-12031298 None:intergenic
CCCAAACAACATGATCCTGT+GGG 0.646890 1_1:-12039991 None:intergenic
TTTCCATCAACACATTCCAA+GGG 0.652000 1_1:-12031161 None:intergenic
ATCACTAATCTGCTACACCC+TGG 0.660224 1_1:+12038536 Msa0008350:CDS
CTTCCATCAACACCTTCCAA+AGG 0.662188 1_1:-12022387 None:intergenic
ATGATGGATGTAAGCAAGGG+TGG 0.681281 1_1:+12030516 Msa0008350:CDS
ATTACTGATCTTCTACACCC+TGG 0.694286 1_1:+12029781 Msa0008350:CDS
GTCACACTGATACTTCACAA+TGG 0.703629 1_1:+12022433 Msa0008350:CDS
AAACAACATGATCCTGTGGG+AGG 0.704413 1_1:-12031295 None:intergenic
AAACAACATGATCCTGTGGG+AGG 0.704413 1_1:-12039988 None:intergenic
GAAGTGAATAAAGAAAACAG+TGG 0.758346 1_1:+12039695 Msa0008350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG + chr1_1:12025941-12025960 Msa0008350:intron 0.0%
!!! ATAAAATTTTAAAATTATTT+AGG - chr1_1:12026254-12026273 None:intergenic 0.0%
!!! TTTTTTTTAAAAAAAAAAAA+AGG + chr1_1:12032017-12032036 Msa0008350:intron 0.0%
!!! AAATAAATAAATAAATTTTT+TGG - chr1_1:12034529-12034548 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG - chr1_1:12025942-12025961 None:intergenic 0.0%
!!! AATTTCAAATTTTGTTATTT+AGG - chr1_1:12023804-12023823 None:intergenic 10.0%
!!! ATAAATATTGTAAAGTTTTA+TGG - chr1_1:12024067-12024086 None:intergenic 10.0%
!!! TAATTATTTTATTTTCTTAG+AGG - chr1_1:12026948-12026967 None:intergenic 10.0%
!! ATTAATATTATAAAATGACA+TGG - chr1_1:12028878-12028897 None:intergenic 10.0%
!! ATTTATTAAAAAATTAGTTG+AGG + chr1_1:12029135-12029154 Msa0008350:intron 10.0%
!! TTTATTAAAAAATTAGTTGA+GGG + chr1_1:12029136-12029155 Msa0008350:intron 10.0%
!! TTATTAAAATATCAGTTATA+AGG - chr1_1:12031721-12031740 None:intergenic 10.0%
!! ATTAATATACATTCATAAAT+TGG - chr1_1:12033285-12033304 None:intergenic 10.0%
!! TTATGAATGTATATTAATAA+AGG + chr1_1:12033287-12033306 Msa0008350:intron 10.0%
!! ATAACTATTGATATTTAATT+TGG - chr1_1:12034253-12034272 None:intergenic 10.0%
!! ACTATATATATATATATGAT+GGG - chr1_1:12034344-12034363 None:intergenic 10.0%
!! TACTATATATATATATATGA+TGG - chr1_1:12034345-12034364 None:intergenic 10.0%
!!! ATTCTTCTTTTTTTTTTTTT+TGG + chr1_1:12036166-12036185 Msa0008350:intron 10.0%
!!! ATTAATGTTTTTAATTTATG+AGG - chr1_1:12036714-12036733 None:intergenic 10.0%
!! ATTAAAAACATTAATTGATA+TGG + chr1_1:12036719-12036738 Msa0008350:intron 10.0%
!!! CTTTAATTTTATTGTATTTG+AGG + chr1_1:12022842-12022861 Msa0008350:intron 15.0%
!! AAAAAACAAAGAAAGATATA+GGG - chr1_1:12023569-12023588 None:intergenic 15.0%
!! AAAAAAACAAAGAAAGATAT+AGG - chr1_1:12023570-12023589 None:intergenic 15.0%
!! AAAAACTTATTAACTTACAA+GGG - chr1_1:12023604-12023623 None:intergenic 15.0%
!!! ATTGATTTTGTTATGATAAT+AGG - chr1_1:12025345-12025364 None:intergenic 15.0%
!!! AACAAAATTTTAAATTTAGG+TGG - chr1_1:12025705-12025724 None:intergenic 15.0%
!! AAAAAGTTATTAACTTACAA+TGG + chr1_1:12025908-12025927 Msa0008350:intron 15.0%
!!! TTTCTTTGTGATTTATTTTA+TGG - chr1_1:12026077-12026096 None:intergenic 15.0%
!! ATACTTATTCAAATAAATGA+AGG - chr1_1:12026323-12026342 None:intergenic 15.0%
!!! AAAAGGTTTTGTTAAAAAAA+GGG - chr1_1:12026699-12026718 None:intergenic 15.0%
!!! AAAAAGGTTTTGTTAAAAAA+AGG - chr1_1:12026700-12026719 None:intergenic 15.0%
!!! TTTTAACAAAACCTTTTTTT+TGG + chr1_1:12026702-12026721 Msa0008350:intron 15.0%
!!! ATTCATAAACTGATTTTAAT+AGG + chr1_1:12026995-12027014 Msa0008350:intron 15.0%
!!! CTAAAAGTGTTTTTTTTTAA+AGG - chr1_1:12027058-12027077 None:intergenic 15.0%
!!! CTTTAAAAAAAAACACTTTT+AGG + chr1_1:12027056-12027075 Msa0008350:intron 15.0%
!! TTTCCAAAAAAAAAAATTAG+AGG + chr1_1:12027214-12027233 Msa0008350:intron 15.0%
!!! ATAATGGTTTTGAAAAATTT+CGG - chr1_1:12027667-12027686 None:intergenic 15.0%
!!! TTTTCAAAACCATTATATTT+TGG + chr1_1:12027671-12027690 Msa0008350:intron 15.0%
!! AATTAAAATGGTTGAATTTA+TGG - chr1_1:12029560-12029579 None:intergenic 15.0%
!! TTTGAAGACATTAATTAAAA+TGG - chr1_1:12029572-12029591 None:intergenic 15.0%
!! TGAGTTAAATAATAAATAGT+AGG - chr1_1:12030201-12030220 None:intergenic 15.0%
!!! AGCAAATTTTCATATTAAAA+AGG - chr1_1:12031572-12031591 None:intergenic 15.0%
!!! TTGCTTTATTTTATTGTATT+TGG + chr1_1:12031587-12031606 Msa0008350:intron 15.0%
!!! TGCTTTATTTTATTGTATTT+GGG + chr1_1:12031588-12031607 Msa0008350:intron 15.0%
!! TTTACAATACTTTCAAATTA+TGG - chr1_1:12031895-12031914 None:intergenic 15.0%
!! TATTGTAAAAGTTTGATATT+CGG + chr1_1:12031906-12031925 Msa0008350:intron 15.0%
!!! TAGAAAATAAAAGAGTATTT+TGG + chr1_1:12033550-12033569 Msa0008350:intron 15.0%
!!! TTTATTAATTTGTACCTTAA+GGG - chr1_1:12033597-12033616 None:intergenic 15.0%
!!! ATTTATTAATTTGTACCTTA+AGG - chr1_1:12033598-12033617 None:intergenic 15.0%
!! TTGAGAAATTATACAAAAAA+TGG + chr1_1:12034169-12034188 Msa0008350:intron 15.0%
!! TTAAATATCAATAGTTATAG+AGG + chr1_1:12034255-12034274 Msa0008350:intron 15.0%
!! ATATATATAGTAAATGTCTT+TGG + chr1_1:12034353-12034372 Msa0008350:intron 15.0%
!! TATATATAGTAAATGTCTTT+GGG + chr1_1:12034354-12034373 Msa0008350:intron 15.0%
!! AAGTAATAATGATATGTTTA+AGG + chr1_1:12034876-12034895 Msa0008350:intron 15.0%
!! TTTAAATTTCAAGATAAGTT+AGG - chr1_1:12035044-12035063 None:intergenic 15.0%
!! TTTAATACATATACAAACAA+AGG + chr1_1:12035072-12035091 Msa0008350:intron 15.0%
!!! TTTTTTTGAAGACATAAAAA+TGG - chr1_1:12035281-12035300 None:intergenic 15.0%
!! TTATGTCTTCAAAAAAAAAA+CGG + chr1_1:12035284-12035303 Msa0008350:intron 15.0%
!! TCTACTATCAATATATTTAA+CGG + chr1_1:12035484-12035503 Msa0008350:intron 15.0%
!!! CTCTCTTTATTTTATTTTTT+TGG - chr1_1:12035786-12035805 None:intergenic 15.0%
!! AAGTAATAATGATATGTTAA+AGG + chr1_1:12036125-12036144 Msa0008350:intron 15.0%
!!! TGTTTTTATTATGAGATTAA+TGG - chr1_1:12036806-12036825 None:intergenic 15.0%
!!! TTTTTATTATATCAACTTTC+AGG + chr1_1:12036898-12036917 Msa0008350:intron 15.0%
!!! TTTTATTATATCAACTTTCA+GGG + chr1_1:12036899-12036918 Msa0008350:intron 15.0%
!!! ACATAATATTTTTATATCAC+AGG + chr1_1:12037139-12037158 Msa0008350:intron 15.0%
!! TAGTAAAAGATGTATTTAAT+AGG - chr1_1:12037884-12037903 None:intergenic 15.0%
!! ACATACAAACTAAAAAAAAA+AGG + chr1_1:12038121-12038140 Msa0008350:intron 15.0%
!!! ATTAATGATAATGTAATTAG+AGG + chr1_1:12038597-12038616 Msa0008350:intron 15.0%
!! TGTTTATTTAATAAATGAGT+TGG - chr1_1:12038838-12038857 None:intergenic 15.0%
!!! TTGAAAAGTTTTTGATTACT+TGG - chr1_1:12022553-12022572 None:intergenic 20.0%
!! TAGTGTTTGTTTATTATTCA+AGG - chr1_1:12022594-12022613 None:intergenic 20.0%
!! CAGTGTTTAATTATGTTATA+TGG + chr1_1:12022666-12022685 Msa0008350:intron 20.0%
!!! ATTTTATTGTATTTGAGGTT+AGG + chr1_1:12022847-12022866 Msa0008350:intron 20.0%
!!! TTTTATTGTATTTGAGGTTA+GGG + chr1_1:12022848-12022867 Msa0008350:intron 20.0%
!!! GATTTTAGATATATAGTCTT+AGG + chr1_1:12023154-12023173 Msa0008350:intron 20.0%
!! ACAAAGGTTAAATATGTAAA+TGG + chr1_1:12023511-12023530 Msa0008350:intron 20.0%
!! CAAAAACTTATTAACTTACA+AGG - chr1_1:12023605-12023624 None:intergenic 20.0%
!!! AACAAAATTTGAAATTCATG+TGG + chr1_1:12023808-12023827 Msa0008350:intron 20.0%
!! TATGATAATTGTTGTGAATT+CGG + chr1_1:12024097-12024116 Msa0008350:intron 20.0%
!!! TTATTATTACTTTTCTTGTG+AGG + chr1_1:12025270-12025289 Msa0008350:intron 20.0%
!! ATAACAAAATCAATACAAGT+TGG + chr1_1:12025351-12025370 Msa0008350:intron 20.0%
!!! TACCTTTTAATTTTTGGTTT+TGG + chr1_1:12025754-12025773 Msa0008350:intron 20.0%
!!! TTTTATGGTTAACATGTAAA+AGG - chr1_1:12026062-12026081 None:intergenic 20.0%
!! GAAAGAAGGAATAAATTAAT+TGG - chr1_1:12026223-12026242 None:intergenic 20.0%
!! GAATAAGTATTTCTTGAATA+AGG + chr1_1:12026333-12026352 Msa0008350:intron 20.0%
!!! AGTCTTTTCAAATTTAATCA+TGG + chr1_1:12026383-12026402 Msa0008350:intron 20.0%
!!! TTACAATTTTAGAAGTCAAA+GGG - chr1_1:12026493-12026512 None:intergenic 20.0%
!!! CTCTTTGTAAGTATTTTTTA+AGG - chr1_1:12026588-12026607 None:intergenic 20.0%
!! ATGCATTGTTAAATTCAAAT+TGG + chr1_1:12026737-12026756 Msa0008350:intron 20.0%
!! TTAGTTGATTGTAATATTTG+CGG - chr1_1:12026860-12026879 None:intergenic 20.0%
!! GGAAAAACTAATAATATTAG+CGG - chr1_1:12026927-12026946 None:intergenic 20.0%
!! AATGTATATCTGCTTATTAT+AGG + chr1_1:12027087-12027106 Msa0008350:intron 20.0%
!!! TCTCCTCTAATTTTTTTTTT+TGG - chr1_1:12027220-12027239 None:intergenic 20.0%
!!! ATTATATTTTGGATGTGTTT+GGG + chr1_1:12027682-12027701 Msa0008350:intron 20.0%
!! TTATTAATTATTAACCGTTG+TGG - chr1_1:12027749-12027768 None:intergenic 20.0%
!!! GCTAAAGTTAATTTTGTTTT+TGG - chr1_1:12028025-12028044 None:intergenic 20.0%
!!! TATCTATTGAATTTTCTTTG+TGG + chr1_1:12028092-12028111 Msa0008350:intron 20.0%
!!! TTTACAATACCGATATTTTT+AGG + chr1_1:12029240-12029259 Msa0008350:intron 20.0%
!! TATGTCAATCCTAAAAATAT+CGG - chr1_1:12029252-12029271 None:intergenic 20.0%
!!! ATTTTTAGGATTGACATATT+CGG + chr1_1:12029254-12029273 Msa0008350:intron 20.0%
!! TAACACTCATAGTTATATAA+AGG + chr1_1:12029378-12029397 Msa0008350:intron 20.0%
!! ATCTTAATAAGAGATGAAAA+GGG - chr1_1:12029954-12029973 None:intergenic 20.0%
!! AATCTTAATAAGAGATGAAA+AGG - chr1_1:12029955-12029974 None:intergenic 20.0%
!!! TCATGAAAAGCATAATATTT+AGG - chr1_1:12031236-12031255 None:intergenic 20.0%
!! TATATAGTACTCATTATTCA+AGG - chr1_1:12031365-12031384 None:intergenic 20.0%
!! CTATGTTAAATTATGCTTTA+TGG + chr1_1:12031434-12031453 Msa0008350:intron 20.0%
!!! GCTTTATTTTATTGTATTTG+GGG + chr1_1:12031589-12031608 Msa0008350:intron 20.0%
!! TTCAATAAGAAATCAAATAG+AGG - chr1_1:12031695-12031714 None:intergenic 20.0%
!!! AGATTTTAGAGAGAAAAATT+GGG + chr1_1:12032347-12032366 Msa0008350:intron 20.0%
!! AAATTATAGATGAAAGTTGA+CGG + chr1_1:12032390-12032409 Msa0008350:intron 20.0%
!!! TTGTGAAATTTTGGAAATTT+TGG + chr1_1:12032448-12032467 Msa0008350:intron 20.0%
!!! TGTGAAATTTTGGAAATTTT+GGG + chr1_1:12032449-12032468 Msa0008350:intron 20.0%
!!! ATCTCCATATTTTTTTTAAG+AGG - chr1_1:12033238-12033257 None:intergenic 20.0%
!! TGAATGTATATTAATAAAGG+AGG + chr1_1:12033290-12033309 Msa0008350:intron 20.0%
!! GAATGTATATTAATAAAGGA+GGG + chr1_1:12033291-12033310 Msa0008350:intron 20.0%
!!! AATAAAAGAGTATTTTGGTA+TGG + chr1_1:12033555-12033574 Msa0008350:intron 20.0%
!!! TAGAGAATAAAAGAGTATTT+TGG + chr1_1:12033630-12033649 Msa0008350:intron 20.0%
!!! AATAAAAGAGTATTTTGGTA+AGG + chr1_1:12033555-12033574 Msa0008350:intron 20.0%
!!! ATAAAAGAGTATTTTGGTAA+GGG + chr1_1:12033636-12033655 Msa0008350:intron 20.0%
!! TAAAAAAACTTGTGTCTTAA+GGG - chr1_1:12033677-12033696 None:intergenic 20.0%
!! TTAAAAAAACTTGTGTCTTA+AGG - chr1_1:12033678-12033697 None:intergenic 20.0%
!! TTCAACGAAAAATTACTAAA+TGG + chr1_1:12034118-12034137 Msa0008350:intron 20.0%
!!! TGATGGGTTTTTAAATTTTT+TGG - chr1_1:12034328-12034347 None:intergenic 20.0%
!! TCATAATCTAACTAATTTCA+TGG + chr1_1:12034755-12034774 Msa0008350:intron 20.0%
!! CATAATCTAACTAATTTCAT+GGG + chr1_1:12034756-12034775 Msa0008350:intron 20.0%
!! TAATAAAAATATCTTGGATG+AGG + chr1_1:12034802-12034821 Msa0008350:intron 20.0%
!! TTAGATTATGAGTTTAATCA+AGG - chr1_1:12035592-12035611 None:intergenic 20.0%
!! TCATAATCTAACTAATTTCA+TGG + chr1_1:12034755-12034774 Msa0008350:intron 20.0%
!! CATAATCTAACTAATTTCAT+GGG + chr1_1:12034756-12034775 Msa0008350:intron 20.0%
!! TACAATGCATAAAATATGTA+AGG + chr1_1:12035735-12035754 Msa0008350:intron 20.0%
!!! CTTCTTTTTTTTTTTTTTGG+TGG + chr1_1:12036169-12036188 Msa0008350:intron 20.0%
!! AGCAAAAAGAAACAAAAAAA+AGG + chr1_1:12036208-12036227 Msa0008350:intron 20.0%
!! TTCATACGAAGTTAAAAAAA+CGG + chr1_1:12036430-12036449 Msa0008350:intron 20.0%
!! TAAAAGAGTTTAATAGTGAT+AGG + chr1_1:12036635-12036654 Msa0008350:intron 20.0%
!! TTCTCAATAAAAAATAAGAC+CGG - chr1_1:12037714-12037733 None:intergenic 20.0%
!!! TATTATGTTTCTAATTCACA+TGG + chr1_1:12037753-12037772 Msa0008350:intron 20.0%
!!! TCACATCATTACTTTTTTAA+TGG + chr1_1:12038296-12038315 Msa0008350:intron 20.0%
!! AATCAAAATAGTTCAATTTG+TGG - chr1_1:12038337-12038356 None:intergenic 20.0%
!! GTTAATATATTCTCAAATGT+AGG + chr1_1:12038427-12038446 Msa0008350:intron 20.0%
!!! AATTGATTCAGTTTATTATG+TGG - chr1_1:12038630-12038649 None:intergenic 20.0%
!! GGAAAATAAAAGAAAATCAA+TGG - chr1_1:12039305-12039324 None:intergenic 20.0%
!! TTGAAAAAAGATTTACATCA+TGG + chr1_1:12039380-12039399 Msa0008350:CDS 20.0%
!! GAGACAATTTCAAATAATAA+TGG + chr1_1:12039428-12039447 Msa0008350:CDS 20.0%
!! AACTTTTCAATTTCATCCAT+AGG + chr1_1:12022563-12022582 Msa0008350:intron 25.0%
! ATTATTCAAGGATAATCCTA+TGG - chr1_1:12022582-12022601 None:intergenic 25.0%
! CACACATAAATAATACATCA+TGG - chr1_1:12022711-12022730 None:intergenic 25.0%
!! GAAAATTTAAAGTACTCCTA+AGG - chr1_1:12023039-12023058 None:intergenic 25.0%
!!! AGGAGTACTTTAAATTTTCT+TGG + chr1_1:12023040-12023059 Msa0008350:intron 25.0%
! AATGCTTAGAAATTACAGTA+TGG - chr1_1:12023214-12023233 None:intergenic 25.0%
!!! AACATTTTGATCATTTTGAG+TGG - chr1_1:12023240-12023259 None:intergenic 25.0%
! AAAATGATCAAAATGTTGAG+CGG + chr1_1:12023243-12023262 Msa0008350:intron 25.0%
!! GTGTTAATTATTTTCCTACT+AGG - chr1_1:12023301-12023320 None:intergenic 25.0%
! AAGAAAAAGAAGCTAAGTTT+GGG - chr1_1:12023454-12023473 None:intergenic 25.0%
! AAAGAAAAAGAAGCTAAGTT+TGG - chr1_1:12023455-12023474 None:intergenic 25.0%
! TTTGTCTTCAAGTAAAACAA+AGG + chr1_1:12023495-12023514 Msa0008350:intron 25.0%
! GAAGAAGATGAAAACAATAA+GGG - chr1_1:12023941-12023960 None:intergenic 25.0%
! AGAAGAAGATGAAAACAATA+AGG - chr1_1:12023942-12023961 None:intergenic 25.0%
! TATCAATGAGTTCTTACAAA+GGG + chr1_1:12024366-12024385 Msa0008350:intron 25.0%
!!! GTTTTTTCACAAACTCAATT+TGG + chr1_1:12024867-12024886 Msa0008350:intron 25.0%
!! TTTTGCATATGGAATTATGA+TGG - chr1_1:12025105-12025124 None:intergenic 25.0%
! TGTTATGATAATAGGAAACA+AGG - chr1_1:12025337-12025356 None:intergenic 25.0%
! AATTGGAGAAAAAGACTTAA+TGG + chr1_1:12025475-12025494 Msa0008350:intron 25.0%
! TAAAAAGATGGAAACAACAA+GGG + chr1_1:12025573-12025592 Msa0008350:intron 25.0%
! GACCAAAACCAAAAATTAAA+AGG - chr1_1:12025759-12025778 None:intergenic 25.0%
! AAGTTATTAACTTACAATGG+TGG + chr1_1:12025911-12025930 Msa0008350:intron 25.0%
! ACTACAATCTAAGAAAAAGA+AGG - chr1_1:12026440-12026459 None:intergenic 25.0%
!!! GTTACAATTTTAGAAGTCAA+AGG - chr1_1:12026494-12026513 None:intergenic 25.0%
!!! AAATTGTAACTTTTTTCGTG+AGG + chr1_1:12026504-12026523 Msa0008350:intron 25.0%
! TTTCGTGAGGTAAAAAATTT+AGG + chr1_1:12026517-12026536 Msa0008350:intron 25.0%
!! AGGTAAAAAATTTAGGATCA+GGG + chr1_1:12026524-12026543 Msa0008350:intron 25.0%
!! GCTTAAAATCTTTTCTACTT+TGG - chr1_1:12026566-12026585 None:intergenic 25.0%
! AACTAATATTGTATGTTCAG+AGG + chr1_1:12026874-12026893 Msa0008350:intron 25.0%
! ACTAATATTGTATGTTCAGA+GGG + chr1_1:12026875-12026894 Msa0008350:intron 25.0%
! ATTAGAGGAGAGAAAAAATA+AGG + chr1_1:12027229-12027248 Msa0008350:intron 25.0%
! TTAGAGGAGAGAAAAAATAA+GGG + chr1_1:12027230-12027249 Msa0008350:intron 25.0%
! TAACATTACCAGAGATATAT+AGG - chr1_1:12027545-12027564 None:intergenic 25.0%
!!! ATAACTATGTGACTGATTTT+TGG - chr1_1:12027601-12027620 None:intergenic 25.0%
!! TATACAATTTTTCTCATCGT+TGG - chr1_1:12027638-12027657 None:intergenic 25.0%
! CAAACACATCCAAAATATAA+TGG - chr1_1:12027683-12027702 None:intergenic 25.0%
!!! CATTATATTTTGGATGTGTT+TGG + chr1_1:12027681-12027700 Msa0008350:intron 25.0%
! TTCAATGACATTAACAAGAT+GGG - chr1_1:12027772-12027791 None:intergenic 25.0%
! ATTCAATGACATTAACAAGA+TGG - chr1_1:12027773-12027792 None:intergenic 25.0%
! TAATATACTATCACCAAAAG+AGG + chr1_1:12027869-12027888 Msa0008350:intron 25.0%
! AATATACTATCACCAAAAGA+GGG + chr1_1:12027870-12027889 Msa0008350:intron 25.0%
!!! AGTGTATTTTGAAAAAGGTT+GGG - chr1_1:12028848-12028867 None:intergenic 25.0%
! TTTCTCATAATAATCAAGAC+CGG - chr1_1:12029099-12029118 None:intergenic 25.0%
!!! AGGGCAATTTTTTTTTCTTA+GGG + chr1_1:12029155-12029174 Msa0008350:intron 25.0%
!! ACACATAACTGAGAAATTTT+AGG - chr1_1:12029291-12029310 None:intergenic 25.0%
! ATTGGTGTATAAACCAAAAA+AGG + chr1_1:12029333-12029352 Msa0008350:intron 25.0%
! ATATTAATGAGAAGTTGAGA+TGG - chr1_1:12029427-12029446 None:intergenic 25.0%
!! ATGAATGTTTTGTAGCATAA+AGG - chr1_1:12029929-12029948 None:intergenic 25.0%
! GCTAACGATTTATATATACT+TGG - chr1_1:12030055-12030074 None:intergenic 25.0%
!!! ATGCAACTAGTTTTTAACTA+AGG - chr1_1:12030306-12030325 None:intergenic 25.0%
! AGTATTTGAATGTTTAAGCA+TGG + chr1_1:12030367-12030386 Msa0008350:intron 25.0%
!!! TTACTGTTTTTAATTGAAGC+TGG + chr1_1:12030468-12030487 Msa0008350:intron 25.0%
!!! TTTTAATTGAAGCTGGATAT+TGG + chr1_1:12030475-12030494 Msa0008350:intron 25.0%
! AAGTAAAACAATGGAACAAA+TGG - chr1_1:12030606-12030625 None:intergenic 25.0%
! AAAGCATACAAGTAAAACAA+TGG - chr1_1:12030615-12030634 None:intergenic 25.0%
! TTGAAAAAAGATTTGCATCA+TGG + chr1_1:12030687-12030706 Msa0008350:intron 25.0%
! GAGACAACTTCAAATAATAA+TGG + chr1_1:12030735-12030754 Msa0008350:intron 25.0%
!! TCCAATTTGTTTGATGAAAA+CGG - chr1_1:12030798-12030817 None:intergenic 25.0%
! GAAGTGGATAAAAATAGTAA+TGG + chr1_1:12031002-12031021 Msa0008350:CDS 25.0%
! CAACAATATGTTATAGCAAA+AGG + chr1_1:12031029-12031048 Msa0008350:intron 25.0%
! TTTAGATTCAATAGACACAA+GGG - chr1_1:12031510-12031529 None:intergenic 25.0%
!! TTTTAGATTCAATAGACACA+AGG - chr1_1:12031511-12031530 None:intergenic 25.0%
! TACTCTGTATATCTTAACAT+AGG + chr1_1:12031628-12031647 Msa0008350:intron 25.0%
! ACTCTGTATATCTTAACATA+GGG + chr1_1:12031629-12031648 Msa0008350:intron 25.0%
! AACTAACATTGTTTATGGTT+TGG + chr1_1:12031812-12031831 Msa0008350:intron 25.0%
! TAAGTGAAAACAGTCAAAAA+CGG - chr1_1:12032092-12032111 None:intergenic 25.0%
!!! GAGATTTTAGAGAGAAAAAT+TGG + chr1_1:12032346-12032365 Msa0008350:intron 25.0%
!!! GATTTTAGAGAGAAAAATTG+GGG + chr1_1:12032348-12032367 Msa0008350:intron 25.0%
!! ATAATTTGTCATGTCTATCA+CGG - chr1_1:12032377-12032396 None:intergenic 25.0%
! TGTGTTTATATGATTCATGT+TGG - chr1_1:12032665-12032684 None:intergenic 25.0%
! CAAATAATATGCATTTCATG+CGG + chr1_1:12033112-12033131 Msa0008350:intron 25.0%
! ATTGTCACCAAAGATAAATT+GGG - chr1_1:12033197-12033216 None:intergenic 25.0%
! AATTGTCACCAAAGATAAAT+TGG - chr1_1:12033198-12033217 None:intergenic 25.0%
! TTGGCCTCTTAAAAAAAATA+TGG + chr1_1:12033231-12033250 Msa0008350:intron 25.0%
!! ATCCTTTTGGTATTATAAGT+TGG + chr1_1:12033779-12033798 Msa0008350:intron 25.0%
! AACCAACTTATAATACCAAA+AGG - chr1_1:12033784-12033803 None:intergenic 25.0%
!!! GATTTTAAAATTGTTCACGA+GGG - chr1_1:12033833-12033852 None:intergenic 25.0%
!!! TGATTTTAAAATTGTTCACG+AGG - chr1_1:12033834-12033853 None:intergenic 25.0%
! TTTGAATGACTTAATGTCAA+GGG - chr1_1:12033895-12033914 None:intergenic 25.0%
!! AATCTAAGACAATTTCCTAA+GGG - chr1_1:12034081-12034100 None:intergenic 25.0%
!! TAATCTAAGACAATTTCCTA+AGG - chr1_1:12034082-12034101 None:intergenic 25.0%
!!! CTATTGATATTTAATTTGGC+CGG - chr1_1:12034249-12034268 None:intergenic 25.0%
! ATCCAAACCATTATTCTTAT+AGG - chr1_1:12034383-12034402 None:intergenic 25.0%
!!! TTTGTTATTCGTGATTGATT+CGG + chr1_1:12034597-12034616 Msa0008350:intron 25.0%
! AGATGTTATTAAATTCGAAG+TGG - chr1_1:12034677-12034696 None:intergenic 25.0%
! TAGATTATGAGTCTAATCAA+GGG - chr1_1:12034745-12034764 None:intergenic 25.0%
! TTAGATTATGAGTCTAATCA+AGG - chr1_1:12034746-12034765 None:intergenic 25.0%
! CAAAAATAAAGTCAAATGAG+TGG - chr1_1:12034941-12034960 None:intergenic 25.0%
! TGAAAAAGGGTTTAGATTTA+GGG - chr1_1:12034965-12034984 None:intergenic 25.0%
! TTGAAAAAGGGTTTAGATTT+AGG - chr1_1:12034966-12034985 None:intergenic 25.0%
!! TATTAATAAGGGGTATGTTT+AGG - chr1_1:12035016-12035035 None:intergenic 25.0%
!! TTAGGACTAGTATTAATAAG+GGG - chr1_1:12035026-12035045 None:intergenic 25.0%
!! GTTAGGACTAGTATTAATAA+GGG - chr1_1:12035027-12035046 None:intergenic 25.0%
!! AGTTAGGACTAGTATTAATA+AGG - chr1_1:12035028-12035047 None:intergenic 25.0%
! AAGAAATGTGAAAAAAGCAA+AGG + chr1_1:12035154-12035173 Msa0008350:intron 25.0%
! AGAAATGTGAAAAAAGCAAA+GGG + chr1_1:12035155-12035174 Msa0008350:intron 25.0%
! AGTGTTGTGCAAATATTTAA+CGG + chr1_1:12035427-12035446 Msa0008350:intron 25.0%
! TCAAGGACAATTAAGAAAAT+TGG - chr1_1:12035575-12035594 None:intergenic 25.0%
!! ATTTTGCTTATAATAGTGAC+CGG + chr1_1:12036064-12036083 Msa0008350:intron 25.0%
!!! GAATATATGTGCTGATTTTA+TGG - chr1_1:12036343-12036362 None:intergenic 25.0%
!!! TGCCTACAATAATTTTGTTT+GGG + chr1_1:12036453-12036472 Msa0008350:intron 25.0%
!!! GCAATTTAGAATGTTTTGAT+TGG - chr1_1:12036692-12036711 None:intergenic 25.0%
! ATTATGAGATTAATGGTGAT+AGG - chr1_1:12036799-12036818 None:intergenic 25.0%
! TGTGTTGTGCAAATATTTAA+TGG + chr1_1:12037002-12037021 Msa0008350:intron 25.0%
! GATGTACAATAGAAAAATGA+CGG - chr1_1:12037482-12037501 None:intergenic 25.0%
!! ACTATTTCTCATAGCATTAA+TGG + chr1_1:12037537-12037556 Msa0008350:intron 25.0%
! GAGAAAAAAAACTAAATCAC+AGG + chr1_1:12037729-12037748 Msa0008350:intron 25.0%
! TCTAATTCACATGGATATAA+AGG + chr1_1:12037762-12037781 Msa0008350:intron 25.0%
!! CATATCCTTATTTCTTCTTA+GGG - chr1_1:12037985-12038004 None:intergenic 25.0%
!! ACATATCCTTATTTCTTCTT+AGG - chr1_1:12037986-12038005 None:intergenic 25.0%
! CATTAATGTGTATGACATTT+AGG + chr1_1:12038084-12038103 Msa0008350:intron 25.0%
!!! CATCATTACTTTTTTAATGG+TGG + chr1_1:12038299-12038318 Msa0008350:intron 25.0%
! CATTTCACTAAAAAACTACA+TGG - chr1_1:12038673-12038692 None:intergenic 25.0%
! TGTAAACACTTGGTTTAATT+CGG - chr1_1:12038748-12038767 None:intergenic 25.0%
! ATTAATGACATGTAAACACT+TGG - chr1_1:12038758-12038777 None:intergenic 25.0%
! ATTGTTGATCAGAAAATAAG+TGG - chr1_1:12038996-12039015 None:intergenic 25.0%
ATAAGTGAGTGTGAAGAAAA+TGG + chr1_1:12022108-12022127 Msa0008350:CDS 30.0%
! TGACTTGCAAGAATATGTAA+TGG + chr1_1:12022248-12022267 Msa0008350:intron 30.0%
CAAGAATATGTAATGGCAAA+AGG + chr1_1:12022255-12022274 Msa0008350:intron 30.0%
GACAGTAAAAAACTGCATAA+GGG - chr1_1:12022335-12022354 None:intergenic 30.0%
TGACAGTAAAAAACTGCATA+AGG - chr1_1:12022336-12022355 None:intergenic 30.0%
ACAATGGAATCCTAAACATT+TGG + chr1_1:12022449-12022468 Msa0008350:CDS 30.0%
ACTTGAAAAGCCAAATGTTT+AGG - chr1_1:12022462-12022481 None:intergenic 30.0%
AGCATTGTGTATGTTCAAAT+TGG + chr1_1:12022760-12022779 Msa0008350:intron 30.0%
TGTCAATACTTGAAATCTCT+TGG - chr1_1:12023082-12023101 None:intergenic 30.0%
AATTGCTTCACTAAACTTTC+CGG + chr1_1:12023185-12023204 Msa0008350:intron 30.0%
CTTACCTAATTGCTTAGAAT+AGG + chr1_1:12023324-12023343 Msa0008350:intron 30.0%
TCATCCTATTCTAAGCAATT+AGG - chr1_1:12023331-12023350 None:intergenic 30.0%
AACTTATTAACTTACAAGGG+TGG - chr1_1:12023601-12023620 None:intergenic 30.0%
TGTAACATAGTTTGACGAAA+TGG - chr1_1:12023636-12023655 None:intergenic 30.0%
ATGATCCCTGATTATATTAC+AGG + chr1_1:12023731-12023750 Msa0008350:intron 30.0%
TGATCCCTGATTATATTACA+GGG + chr1_1:12023732-12023751 Msa0008350:intron 30.0%
!!! TACCTTTTCGTTTTTGGTTT+TGG - chr1_1:12023759-12023778 None:intergenic 30.0%
TTGTTCCCTGTAATATAGTT+CGG - chr1_1:12023848-12023867 None:intergenic 30.0%
CAAAAACGAAAAGTTACTGA+GGG + chr1_1:12023872-12023891 Msa0008350:intron 30.0%
CATATTCTTCTTCTTCTTCT+GGG + chr1_1:12023973-12023992 Msa0008350:intron 30.0%
TGATGAAAACATTGTTAGCA+GGG - chr1_1:12024015-12024034 None:intergenic 30.0%
ATGATGAAAACATTGTTAGC+AGG - chr1_1:12024016-12024035 None:intergenic 30.0%
CCTTAAAGAAACATGCTTTA+TGG - chr1_1:12024039-12024058 None:intergenic 30.0%
CCATAAAGCATGTTTCTTTA+AGG + chr1_1:12024036-12024055 Msa0008350:intron 30.0%
! TAAAGCATGTTTCTTTAAGG+CGG + chr1_1:12024039-12024058 Msa0008350:intron 30.0%
!! GCTTGTGTTTACTTTGAAAT+TGG - chr1_1:12024177-12024196 None:intergenic 30.0%
TTGATTCCTAGATTAGATCT+AGG - chr1_1:12024219-12024238 None:intergenic 30.0%
TTGTAAGAACTCATTGATAG+TGG - chr1_1:12024365-12024384 None:intergenic 30.0%
CTATCAATGAGTTCTTACAA+AGG + chr1_1:12024365-12024384 Msa0008350:intron 30.0%
TTCTTACAAAGGGATACAAA+TGG + chr1_1:12024376-12024395 Msa0008350:intron 30.0%
TCTTACAAAGGGATACAAAT+GGG + chr1_1:12024377-12024396 Msa0008350:intron 30.0%
TTTCACAAACTCAATTTGGA+AGG + chr1_1:12024871-12024890 Msa0008350:intron 30.0%
ATAGCTGTGAAGTTTCTTTA+AGG + chr1_1:12024960-12024979 Msa0008350:intron 30.0%
TTGACATTAGATATTGCATC+AGG - chr1_1:12025041-12025060 None:intergenic 30.0%
!!! ATGACAACTTGTTTTGCATA+TGG - chr1_1:12025116-12025135 None:intergenic 30.0%
AGGTTGAGATTAGAATTGTA+AGG + chr1_1:12025208-12025227 Msa0008350:intron 30.0%
AAGGAATTGGGTATATGAAT+TGG + chr1_1:12025302-12025321 Msa0008350:intron 30.0%
ATGATAATAGGAAACAAGGA+TGG - chr1_1:12025333-12025352 None:intergenic 30.0%
AAGAAGCTATGGAATTCAAT+TGG + chr1_1:12025458-12025477 Msa0008350:intron 30.0%
GTAAAAAGATGGAAACAACA+AGG + chr1_1:12025572-12025591 Msa0008350:intron 30.0%
!!! TAACTTTTCGTTTCTGGTTT+TGG + chr1_1:12025646-12025665 Msa0008350:intron 30.0%
! CCAAAAATTAAAAGGTACAG+AGG - chr1_1:12025751-12025770 None:intergenic 30.0%
!!! CCTCTGTACCTTTTAATTTT+TGG + chr1_1:12025748-12025767 Msa0008350:intron 30.0%
TTTAGGCTGAATTTGAAAGA+AGG - chr1_1:12026237-12026256 None:intergenic 30.0%
TCTAAGAAAAAGAAGGTTGA+AGG - chr1_1:12026433-12026452 None:intergenic 30.0%
! GAGGTAAAAAATTTAGGATC+AGG + chr1_1:12026523-12026542 Msa0008350:intron 30.0%
! GGTAAAAAATTTAGGATCAG+GGG + chr1_1:12026525-12026544 Msa0008350:intron 30.0%
!! GTTTTGTTAAAAAAAGGGTC+AGG - chr1_1:12026694-12026713 None:intergenic 30.0%
!!! ACAAAACCTTTTTTTTGGTG+TGG + chr1_1:12026707-12026726 Msa0008350:intron 30.0%
CTATTTCCACACCAAAAAAA+AGG - chr1_1:12026716-12026735 None:intergenic 30.0%
AAGATGCATTATGATATGTC+AGG - chr1_1:12026795-12026814 None:intergenic 30.0%
! ATCATAATGCATCTTTTGAG+AGG + chr1_1:12026800-12026819 Msa0008350:intron 30.0%
!!! TATGTGACTGATTTTTGGTT+TGG - chr1_1:12027596-12027615 None:intergenic 30.0%
!!! GTTACTTTTCGATTCGTTTT+CGG + chr1_1:12027704-12027723 Msa0008350:intron 30.0%
ATATACTATCACCAAAAGAG+GGG + chr1_1:12027871-12027890 Msa0008350:intron 30.0%
AAGTTAAATTTCACTCCTTG+TGG - chr1_1:12028060-12028079 None:intergenic 30.0%
!! TTTGAGTTTTGTGGAATGAA+AGG - chr1_1:12028135-12028154 None:intergenic 30.0%
! GTAATCATTTCAGGACTTTT+TGG - chr1_1:12028295-12028314 None:intergenic 30.0%
TCCTGAAATGATTACAAGAA+AGG + chr1_1:12028300-12028319 Msa0008350:intron 30.0%
TCCTTTCTTGTAATCATTTC+AGG - chr1_1:12028304-12028323 None:intergenic 30.0%
ACTAATGAGAATCGTATTGT+GGG - chr1_1:12028506-12028525 None:intergenic 30.0%
TACTAATGAGAATCGTATTG+TGG - chr1_1:12028507-12028526 None:intergenic 30.0%
!! AGGATCATATTTTAGATCAG+AGG - chr1_1:12028589-12028608 None:intergenic 30.0%
! GCTTTCTAATGTAATTTTGC+AGG - chr1_1:12028609-12028628 None:intergenic 30.0%
!! ATTTTGAAAAAGGTTGGGAA+CGG - chr1_1:12028843-12028862 None:intergenic 30.0%
!! GAGTGTATTTTGAAAAAGGT+TGG - chr1_1:12028849-12028868 None:intergenic 30.0%
TTCTCATACTACCATTAATG+TGG + chr1_1:12028952-12028971 Msa0008350:intron 30.0%
TACAGAGTTATCCACATTAA+TGG - chr1_1:12028966-12028985 None:intergenic 30.0%
TTCTCATAATAATCAAGACC+GGG - chr1_1:12029098-12029117 None:intergenic 30.0%
!!! GAGGGCAATTTTTTTTTCTT+AGG + chr1_1:12029154-12029173 Msa0008350:intron 30.0%
!!! GCAATTTTTTTTTCTTAGGG+AGG + chr1_1:12029158-12029177 Msa0008350:intron 30.0%
!! GTTATGTGTGAGTTTTTAAG+TGG + chr1_1:12029302-12029321 Msa0008350:intron 30.0%
!! TTTTAAGTGGTGCTTTTCAT+TGG + chr1_1:12029315-12029334 Msa0008350:intron 30.0%
TTGAGATGGAATGAAAAACA+AGG - chr1_1:12029413-12029432 None:intergenic 30.0%
TCAGCTTCACTAATCAAATA+TGG + chr1_1:12029483-12029502 Msa0008350:intron 30.0%
AAGTAATGATGTGAAAGAGA+TGG - chr1_1:12029513-12029532 None:intergenic 30.0%
TATTTCCACCTCAATATTAC+TGG + chr1_1:12029722-12029741 Msa0008350:CDS 30.0%
CAAGCTCTATCAACAAAATT+AGG + chr1_1:12029869-12029888 Msa0008350:intron 30.0%
ACAAAATTAGGAGCAATAAG+TGG + chr1_1:12029881-12029900 Msa0008350:intron 30.0%
CAAAATTAGGAGCAATAAGT+GGG + chr1_1:12029882-12029901 Msa0008350:intron 30.0%
! TGTTTTGTAGCATAAAGGTT+GGG - chr1_1:12029924-12029943 None:intergenic 30.0%
! ATGTTTTGTAGCATAAAGGT+TGG - chr1_1:12029925-12029944 None:intergenic 30.0%
CACATGTAATGCATAAAAAC+TGG - chr1_1:12030238-12030257 None:intergenic 30.0%
TTTGAATGTTTAAGCATGGA+AGG + chr1_1:12030371-12030390 Msa0008350:intron 30.0%
TAAAGAGAAAGCAACAATGA+TGG + chr1_1:12030500-12030519 Msa0008350:CDS 30.0%
TTTGTTTGATGAAAACGGTA+TGG - chr1_1:12030793-12030812 None:intergenic 30.0%
! ACCGTTTTCATCAAACAAAT+TGG + chr1_1:12030794-12030813 Msa0008350:CDS 30.0%
! AACAAGTTTTCCATCAAAGA+AGG + chr1_1:12030828-12030847 Msa0008350:CDS 30.0%
! AAAGCTTTGTGTAACATCAT+TGG + chr1_1:12030920-12030939 Msa0008350:CDS 30.0%
TGTAACATCATTGGAATCTA+TGG + chr1_1:12030929-12030948 Msa0008350:CDS 30.0%
GATTTCACTATTTCGAAACT+CGG + chr1_1:12030954-12030973 Msa0008350:CDS 30.0%
GACAGTAAAAAACTGCATAA+GGG - chr1_1:12022335-12022354 None:intergenic 30.0%
TGACAGTAAAAAACTGCATA+AGG - chr1_1:12022336-12022355 None:intergenic 30.0%
GATACAACTATTGATGAAAG+GGG - chr1_1:12031343-12031362 None:intergenic 30.0%
GGATACAACTATTGATGAAA+GGG - chr1_1:12031344-12031363 None:intergenic 30.0%
AGGATACAACTATTGATGAA+AGG - chr1_1:12031345-12031364 None:intergenic 30.0%
! GTGTCAAGATATAGAGTTTT+TGG - chr1_1:12031656-12031675 None:intergenic 30.0%
GTGTGAACTAACATTGTTTA+TGG + chr1_1:12031807-12031826 Msa0008350:intron 30.0%
!! GTTCAACTATTTTAAACCGT+TGG - chr1_1:12031873-12031892 None:intergenic 30.0%
AAAAAACTTTGGTTGTGTTG+AGG - chr1_1:12032002-12032021 None:intergenic 30.0%
ACTGCAACATAACATTGTTA+CGG + chr1_1:12032145-12032164 Msa0008350:intron 30.0%
ATGCTATCTAAGTTAGAAGA+TGG - chr1_1:12032247-12032266 None:intergenic 30.0%
TTTATATTACCAACTTGGAG+TGG - chr1_1:12032273-12032292 None:intergenic 30.0%
GGAGATTTATATTACCAACT+TGG - chr1_1:12032278-12032297 None:intergenic 30.0%
! CGTTTAGATTTTCGTGATTT+CGG - chr1_1:12032574-12032593 None:intergenic 30.0%
TATGCATCCCAATTTATCTT+TGG + chr1_1:12033187-12033206 Msa0008350:intron 30.0%
ATGGAGATTAGATAAGAAAG+TGG + chr1_1:12033250-12033269 Msa0008350:intron 30.0%
GTATATTAATAAAGGAGGGA+TGG + chr1_1:12033295-12033314 Msa0008350:intron 30.0%
AAAAAGGAAAGAGAAAGAGA+GGG + chr1_1:12033325-12033344 Msa0008350:intron 30.0%
TTTCTTAACATGTGTCTGAA+GGG + chr1_1:12033742-12033761 Msa0008350:intron 30.0%
! ACAAGTTAGCAATATCCTTT+TGG + chr1_1:12033766-12033785 Msa0008350:intron 30.0%
GTTTGAATGACTTAATGTCA+AGG - chr1_1:12033896-12033915 None:intergenic 30.0%
GAAGTATAAGAAAAGAACCA+CGG - chr1_1:12033922-12033941 None:intergenic 30.0%
! GTGGTTCTTTTCTTATACTT+CGG + chr1_1:12033921-12033940 Msa0008350:intron 30.0%
! ATCTTTTCTTTTGCTCGATT+AGG - chr1_1:12034148-12034167 None:intergenic 30.0%
CACCTATAAGAATAATGGTT+TGG + chr1_1:12034378-12034397 Msa0008350:intron 30.0%
!! TAATGGTTTGGATTAGCTTT+CGG + chr1_1:12034390-12034409 Msa0008350:intron 30.0%
GTCGTTGTATATAACATCAA+CGG + chr1_1:12034629-12034648 Msa0008350:intron 30.0%
TGTATATAACATCAACGGTT+CGG + chr1_1:12034634-12034653 Msa0008350:intron 30.0%
AACTAATTTCATGGGCTTAA+TGG + chr1_1:12034764-12034783 Msa0008350:intron 30.0%
CAAATGAGTGGTTAGATATA+GGG - chr1_1:12034929-12034948 None:intergenic 30.0%
TCAAATGAGTGGTTAGATAT+AGG - chr1_1:12034930-12034949 None:intergenic 30.0%
GCATCTAGTAGTTTGAAAAA+GGG - chr1_1:12034978-12034997 None:intergenic 30.0%
TGCATCTAGTAGTTTGAAAA+AGG - chr1_1:12034979-12034998 None:intergenic 30.0%
AGGACAATTAAGAAAATTGG+TGG - chr1_1:12035572-12035591 None:intergenic 30.0%
AACTAATTTCATGGGCTTAA+TGG + chr1_1:12034764-12034783 Msa0008350:intron 30.0%
TGCATAAAATATGTAAGGTC+CGG + chr1_1:12035740-12035759 Msa0008350:intron 30.0%
! GTGCCTACAATAATTTTGTT+TGG + chr1_1:12036452-12036471 Msa0008350:intron 30.0%
AGCCCAAACAAAATTATTGT+AGG - chr1_1:12036458-12036477 None:intergenic 30.0%
! GTCAATTTTCTTCAGCTTAA+TGG + chr1_1:12036488-12036507 Msa0008350:intron 30.0%
ATAAAGTCTCAAATGAGTGT+TGG + chr1_1:12036562-12036581 Msa0008350:intron 30.0%
TAAAGTCTCAAATGAGTGTT+GGG + chr1_1:12036563-12036582 Msa0008350:intron 30.0%
! AGTGTTGGGAGAATATTTAA+CGG + chr1_1:12036577-12036596 Msa0008350:intron 30.0%
! GTTTAATAGTGATAGGTTGA+TGG + chr1_1:12036642-12036661 Msa0008350:intron 30.0%
!! TTGTGTTTGCAATGTTGTTT+TGG - chr1_1:12036669-12036688 None:intergenic 30.0%
AGTGCAGTGCAAATATTTAA+CGG + chr1_1:12037185-12037204 Msa0008350:intron 30.0%
TACAATAGAAAAATGACGGT+GGG - chr1_1:12037478-12037497 None:intergenic 30.0%
ATTTCTCATAGCATTAATGG+TGG + chr1_1:12037540-12037559 Msa0008350:intron 30.0%
TAGTAATTGTGTACTCTATC+CGG + chr1_1:12037692-12037711 Msa0008350:intron 30.0%
ATTCACATGGATATAAAGGA+CGG + chr1_1:12037766-12037785 Msa0008350:intron 30.0%
CTTGCAATGACGATATTATT+AGG + chr1_1:12038024-12038043 Msa0008350:intron 30.0%
GAAGTTTCGTGTTTAAATTC+AGG - chr1_1:12038063-12038082 None:intergenic 30.0%
TAATGTGTATGACATTTAGG+TGG + chr1_1:12038087-12038106 Msa0008350:intron 30.0%
AATGTGTATGACATTTAGGT+GGG + chr1_1:12038088-12038107 Msa0008350:intron 30.0%
! TTTTGTCCCTCGTTATATAA+AGG + chr1_1:12038166-12038185 Msa0008350:intron 30.0%
TTTGTCCCTCGTTATATAAA+GGG + chr1_1:12038167-12038186 Msa0008350:intron 30.0%
AAGAACCCTTTATATAACGA+GGG - chr1_1:12038175-12038194 None:intergenic 30.0%
AAAGAGATGAAATTCCATGT+TGG - chr1_1:12038277-12038296 None:intergenic 30.0%
CAAAATAGTTCAATTTGTGG+AGG - chr1_1:12038334-12038353 None:intergenic 30.0%
AAATTGCATGATACAAACCA+GGG - chr1_1:12038556-12038575 None:intergenic 30.0%
AAAATTGCATGATACAAACC+AGG - chr1_1:12038557-12038576 None:intergenic 30.0%
!! CATTAATCACTTTTAACACG+TGG - chr1_1:12038584-12038603 None:intergenic 30.0%
!!! ATAAGTGGAACTAGTTTTGA+AGG - chr1_1:12038981-12039000 None:intergenic 30.0%
TATCCAGCTTCAGTTAAAAA+CGG - chr1_1:12039170-12039189 None:intergenic 30.0%
!! TTTTAACTGAAGCTGGATAT+TGG + chr1_1:12039171-12039190 Msa0008350:intron 30.0%
TATATGCTAGACTCAGAAAA+GGG + chr1_1:12039237-12039256 Msa0008350:CDS 30.0%
TTTGTTTGATGAAAACGGTA+TGG - chr1_1:12030793-12030812 None:intergenic 30.0%
! ACCGTTTTCATCAAACAAAT+TGG + chr1_1:12030794-12030813 Msa0008350:CDS 30.0%
! CCCAATTTGTTTGATGAAAA+CGG - chr1_1:12039491-12039510 None:intergenic 30.0%
! CCGTTTTCATCAAACAAATT+GGG + chr1_1:12030795-12030814 Msa0008350:CDS 30.0%
! ACTCAACAAGTTTTTCATCA+AGG + chr1_1:12039517-12039536 Msa0008350:CDS 30.0%
! AACAAGTTTTTCATCAAGGA+AGG + chr1_1:12039521-12039540 Msa0008350:CDS 30.0%
! AAAGCTTTGTGTAACATCAT+TGG + chr1_1:12030920-12030939 Msa0008350:CDS 30.0%
TGTAACATCATTGGAATCTA+TGG + chr1_1:12030929-12030948 Msa0008350:CDS 30.0%
GATTTCACTATTTCGAAACT+CGG + chr1_1:12030954-12030973 Msa0008350:CDS 30.0%
! GTTTTCTTTATTCACTTCTG+TGG - chr1_1:12039693-12039712 None:intergenic 30.0%
GAAGTGAATAAAGAAAACAG+TGG + chr1_1:12039695-12039714 Msa0008350:CDS 30.0%
CAACAATATGTAATAGCGAA+AGG + chr1_1:12039722-12039741 Msa0008350:CDS 30.0%
GACAGTAAAAAACTGCATAA+GGG - chr1_1:12022335-12022354 None:intergenic 30.0%
TGACAGTAAAAAACTGCATA+AGG - chr1_1:12022336-12022355 None:intergenic 30.0%
AGAATGGAATCCTAAACATT+TGG + chr1_1:12039916-12039935 Msa0008350:CDS 30.0%
ACATGAAAAGCCAAATGTTT+AGG - chr1_1:12039929-12039948 None:intergenic 30.0%
TTCTTCTGTTCCTTCTTTGA+TGG - chr1_1:12022067-12022086 None:intergenic 35.0%
TGTGAAGAAAATGGCATCAA+AGG + chr1_1:12022117-12022136 Msa0008350:CDS 35.0%
! AAAGCTTTGTGTGACATCAT+TGG + chr1_1:12022146-12022165 Msa0008350:CDS 35.0%
TGTGACATCATTGGAATCTA+TGG + chr1_1:12022155-12022174 Msa0008350:CDS 35.0%
GATTTCACTACTTCGAAACT+TGG + chr1_1:12022180-12022199 Msa0008350:CDS 35.0%
! GCAAAAGGTGTGAAGAAATT+GGG + chr1_1:12022270-12022289 Msa0008350:intron 35.0%
TAAAGTTTACTCTGTGCCTT+TGG + chr1_1:12022371-12022390 Msa0008350:CDS 35.0%
TTGAGTAGTAGCAAATCCTT+AGG + chr1_1:12023020-12023039 Msa0008350:intron 35.0%
! TTTAAATTTTCTTGGCGAGC+TGG + chr1_1:12023048-12023067 Msa0008350:intron 35.0%
AGAAATTACAGTATGGCAAC+CGG - chr1_1:12023207-12023226 None:intergenic 35.0%
! AACTCTAAGAATTGCCTAGT+AGG + chr1_1:12023284-12023303 Msa0008350:intron 35.0%
ACAAAAACACACGAACTTAC+AGG - chr1_1:12023539-12023558 None:intergenic 35.0%
TGGTCCCTGTAATATAATCA+GGG - chr1_1:12023739-12023758 None:intergenic 35.0%
TTGGTCCCTGTAATATAATC+AGG - chr1_1:12023740-12023759 None:intergenic 35.0%
GACCAAAACCAAAAACGAAA+AGG + chr1_1:12023754-12023773 Msa0008350:intron 35.0%
! CAAAAACGAAAAGGTACAGA+GGG + chr1_1:12023763-12023782 Msa0008350:intron 35.0%
TGTTCCCTGTAATATAGTTC+GGG - chr1_1:12023847-12023866 None:intergenic 35.0%
! CCTCAGTAACTTTTCGTTTT+TGG - chr1_1:12023874-12023893 None:intergenic 35.0%
CCAAAAACGAAAAGTTACTG+AGG + chr1_1:12023871-12023890 Msa0008350:intron 35.0%
CCAGAAGAAGAAGAAGAATA+TGG - chr1_1:12023975-12023994 None:intergenic 35.0%
CCATATTCTTCTTCTTCTTC+TGG + chr1_1:12023972-12023991 Msa0008350:intron 35.0%
ACCAATACAACTATGATGTG+TGG + chr1_1:12024133-12024152 Msa0008350:intron 35.0%
TCCACACATCATAGTTGTAT+TGG - chr1_1:12024137-12024156 None:intergenic 35.0%
!! AGAACTCATTGATAGTGGAT+TGG - chr1_1:12024360-12024379 None:intergenic 35.0%
GGGAAAATGGGTAGAAATTA+GGG - chr1_1:12024441-12024460 None:intergenic 35.0%
TGGGAAAATGGGTAGAAATT+AGG - chr1_1:12024442-12024461 None:intergenic 35.0%
ATTGGTGAGATTGGGAAAAT+GGG - chr1_1:12024453-12024472 None:intergenic 35.0%
TCTTGTTCATTGGTGAGATT+GGG - chr1_1:12024461-12024480 None:intergenic 35.0%
! TCATTGAGTGTCTTGTTCAT+TGG - chr1_1:12024471-12024490 None:intergenic 35.0%
GGAAACATTGTAAACACCTT+GGG - chr1_1:12024504-12024523 None:intergenic 35.0%
ACTTCAAGAGAGAGAAACTT+GGG - chr1_1:12024585-12024604 None:intergenic 35.0%
AACTTCAAGAGAGAGAAACT+TGG - chr1_1:12024586-12024605 None:intergenic 35.0%
!! TTTCAGCTCATTTTTGAGAG+GGG - chr1_1:12024618-12024637 None:intergenic 35.0%
!! GTTTCAGCTCATTTTTGAGA+GGG - chr1_1:12024619-12024638 None:intergenic 35.0%
!! TGTTTCAGCTCATTTTTGAG+AGG - chr1_1:12024620-12024639 None:intergenic 35.0%
TTTGATGCGAGTTTCAGAAA+TGG - chr1_1:12024922-12024941 None:intergenic 35.0%
!! ATTTCTGAAACTCGCATCAA+AGG + chr1_1:12024921-12024940 Msa0008350:intron 35.0%
TTCACAGCTATGAAGCAAAT+GGG - chr1_1:12024951-12024970 None:intergenic 35.0%
TACAAGACTCAATTACCATG+TGG - chr1_1:12024997-12025016 None:intergenic 35.0%
AAAGCACATGAGAAGTGAAA+AGG + chr1_1:12025188-12025207 Msa0008350:intron 35.0%
ATGTTGAAGACATTGTTAGC+AGG + chr1_1:12025498-12025517 Msa0008350:intron 35.0%
TGTTGAAGACATTGTTAGCA+GGG + chr1_1:12025499-12025518 Msa0008350:intron 35.0%
TCAGAGAGAGAGTAAAAAGA+TGG + chr1_1:12025561-12025580 Msa0008350:intron 35.0%
AGAAACGAAAAGTTACAGAG+GGG - chr1_1:12025641-12025660 None:intergenic 35.0%
CAGAAACGAAAAGTTACAGA+GGG - chr1_1:12025642-12025661 None:intergenic 35.0%
! TGGTCACTGACTATATTACA+AGG - chr1_1:12025673-12025692 None:intergenic 35.0%
TAATATAGTCAGTGACCATC+TGG + chr1_1:12025675-12025694 Msa0008350:intron 35.0%
TTTGGTCCCTATAGTATAGT+CGG + chr1_1:12025772-12025791 Msa0008350:intron 35.0%
TGATTCCCGACTATACTATA+GGG - chr1_1:12025781-12025800 None:intergenic 35.0%
ATGATTCCCGACTATACTAT+AGG - chr1_1:12025782-12025801 None:intergenic 35.0%
TGTAATAGAGTTTGACGAGA+AGG + chr1_1:12025876-12025895 Msa0008350:intron 35.0%
! AAAAAATTTAGGATCAGGGG+TGG + chr1_1:12026528-12026547 Msa0008350:intron 35.0%
GTTAAAAAAAGGGTCAGGTT+CGG - chr1_1:12026689-12026708 None:intergenic 35.0%
ACAAGACATAATCCATTTCC+TGG + chr1_1:12026824-12026843 Msa0008350:intron 35.0%
TAATAATATTAGCGGTGAGC+CGG - chr1_1:12026919-12026938 None:intergenic 35.0%
AGTGAAGTATGAAGTGTGAA+AGG + chr1_1:12027475-12027494 Msa0008350:intron 35.0%
AATGAGATGTAATGGTTCGT+AGG + chr1_1:12027513-12027532 Msa0008350:intron 35.0%
GGTAGATTCCTATATATCTC+TGG + chr1_1:12027534-12027553 Msa0008350:intron 35.0%
! TAACTCATCTTGTGCTATTG+AGG - chr1_1:12027897-12027916 None:intergenic 35.0%
!!! GTCTATTGTTTTTTGTGTGC+TGG - chr1_1:12027949-12027968 None:intergenic 35.0%
!!! TTGTTTTTGGCCATCAAAGA+TGG - chr1_1:12028012-12028031 None:intergenic 35.0%
TTAAATTTCACTCCTTGTGG+TGG - chr1_1:12028057-12028076 None:intergenic 35.0%
!! TCACTTGTGTTTGAGTTTTG+TGG - chr1_1:12028144-12028163 None:intergenic 35.0%
GGTCGTTTATGCAACTTATA+TGG - chr1_1:12028168-12028187 None:intergenic 35.0%
ATTGAACCTCATGTAGAACA+AGG + chr1_1:12028196-12028215 Msa0008350:intron 35.0%
TTGAACCTCATGTAGAACAA+GGG + chr1_1:12028197-12028216 Msa0008350:intron 35.0%
GGGAATTGAACAAAATTGTC+AGG + chr1_1:12028217-12028236 Msa0008350:intron 35.0%
AATGCAATTCGATTTAGCCA+TGG + chr1_1:12028240-12028259 Msa0008350:intron 35.0%
!!! TGAAGGTGTCGATTTTTGTT+TGG - chr1_1:12028445-12028464 None:intergenic 35.0%
TAATGAGAATCGTATTGTGG+GGG - chr1_1:12028504-12028523 None:intergenic 35.0%
CTAATGAGAATCGTATTGTG+GGG - chr1_1:12028505-12028524 None:intergenic 35.0%
!! ATATTTTAGATCAGAGGCAG+TGG - chr1_1:12028583-12028602 None:intergenic 35.0%
ATCAGTCAATTAGTCGAGTA+CGG - chr1_1:12028742-12028761 None:intergenic 35.0%
ACGGAAGTAATACTTTCTTC+TGG - chr1_1:12028824-12028843 None:intergenic 35.0%
!! TCGCGAGTGTATTTTGAAAA+AGG - chr1_1:12028853-12028872 None:intergenic 35.0%
TCTCATAATAATCAAGACCG+GGG - chr1_1:12029097-12029116 None:intergenic 35.0%
TCGGTATTGTAAATTGAGCT+AGG - chr1_1:12029233-12029252 None:intergenic 35.0%
ATGAGTGTTACCTGAAACAA+AGG - chr1_1:12029368-12029387 None:intergenic 35.0%
TCACATCATTACTTCTCTCA+TGG + chr1_1:12029519-12029538 Msa0008350:intron 35.0%
ATGGACTTCCAGTAATATTG+AGG - chr1_1:12029733-12029752 None:intergenic 35.0%
TTAGAGTATGATACTGACCA+GGG - chr1_1:12029801-12029820 None:intergenic 35.0%
! TTTAGAGTATGATACTGACC+AGG - chr1_1:12029802-12029821 None:intergenic 35.0%
AGAGCTTGAAATTAAACACG+TGG - chr1_1:12029857-12029876 None:intergenic 35.0%
! GTTTTGTAGCATAAAGGTTG+GGG - chr1_1:12029923-12029942 None:intergenic 35.0%
!! AACAATGATGGATGTAAGCA+AGG + chr1_1:12030512-12030531 Msa0008350:CDS 35.0%
!! ACAATGATGGATGTAAGCAA+GGG + chr1_1:12030513-12030532 Msa0008350:CDS 35.0%
TAGATGTTGGAGTCAGAAAA+GGG + chr1_1:12030541-12030560 Msa0008350:CDS 35.0%
ATGGAATTAGCAACTTCTCT+AGG - chr1_1:12030774-12030793 None:intergenic 35.0%
TTCCATCAAAGAAGGATCAA+AGG + chr1_1:12030836-12030855 Msa0008350:CDS 35.0%
TTCCTTTGATCCTTCTTTGA+TGG - chr1_1:12030841-12030860 None:intergenic 35.0%
ATAAGTGAGTGTGAAGCAAA+TGG + chr1_1:12030882-12030901 Msa0008350:CDS 35.0%
TTTCCATCAACACATTCCAA+GGG - chr1_1:12031164-12031183 None:intergenic 35.0%
!! AACTATTGCTGTTTGTCACA+CGG + chr1_1:12031193-12031212 Msa0008350:CDS 35.0%
ATGAGCTTAAAGTTCAACCT+GGG + chr1_1:12031252-12031271 Msa0008350:CDS 35.0%
!!! AAAGGGGTTTTGTTTTCACT+TGG - chr1_1:12031327-12031346 None:intergenic 35.0%
!! GTTTTTCGTTCTAAGTCCAA+CGG + chr1_1:12031854-12031873 Msa0008350:intron 35.0%
!! TTGAGGATGATGGGAAATAA+TGG - chr1_1:12031985-12032004 None:intergenic 35.0%
! TTTTGTAACAGCCGAAATCT+CGG - chr1_1:12032050-12032069 None:intergenic 35.0%
AAAACAGTCAAAAACGGTAC+CGG - chr1_1:12032086-12032105 None:intergenic 35.0%
ACAACAACACCAACATAAGA+GGG - chr1_1:12032303-12032322 None:intergenic 35.0%
! ATGTCTGCGTTGTGAAATTT+TGG + chr1_1:12032439-12032458 Msa0008350:intron 35.0%
TTTCATCTTTCGTTCAGATC+TGG - chr1_1:12032782-12032801 None:intergenic 35.0%
ATAATATGCATTTCATGCGG+TGG + chr1_1:12033115-12033134 Msa0008350:intron 35.0%
! ATCTTTGGTGACAATTTCAG+TGG + chr1_1:12033202-12033221 Msa0008350:intron 35.0%
! TCTTTGGTGACAATTTCAGT+GGG + chr1_1:12033203-12033222 Msa0008350:intron 35.0%
!! ACAATTTCAGTGGGTTAGTT+TGG + chr1_1:12033212-12033231 Msa0008350:intron 35.0%
GAAAAAGGAAAGAGAAAGAG+AGG + chr1_1:12033324-12033343 Msa0008350:intron 35.0%
CATATACAGAGAGATAGAGA+CGG + chr1_1:12033373-12033392 Msa0008350:intron 35.0%
ATATACAGAGAGATAGAGAC+GGG + chr1_1:12033374-12033393 Msa0008350:intron 35.0%
TTGGTATGGAAAATGCTAAC+TGG + chr1_1:12033569-12033588 Msa0008350:intron 35.0%
GTTTCTTAACATGTGTCTGA+AGG + chr1_1:12033741-12033760 Msa0008350:intron 35.0%
ATGACTTAATGTCAAGGGAT+TGG - chr1_1:12033890-12033909 None:intergenic 35.0%
CCAACAATTAGTTGTGTTGT+CGG + chr1_1:12034044-12034063 Msa0008350:intron 35.0%
CAAACTCTGCTTAGATCATA+CGG + chr1_1:12034218-12034237 Msa0008350:intron 35.0%
TGGGTCACCTATAAGAATAA+TGG + chr1_1:12034373-12034392 Msa0008350:intron 35.0%
ATTATAGTTGCGGTTCAGTT+TGG - chr1_1:12034423-12034442 None:intergenic 35.0%
CGAACATGCTATTATAGTTG+CGG - chr1_1:12034433-12034452 None:intergenic 35.0%
AGCTTCCATTAACCATACAT+GGG - chr1_1:12034565-12034584 None:intergenic 35.0%
TAGCTTCCATTAACCATACA+TGG - chr1_1:12034566-12034585 None:intergenic 35.0%
CAAGGGCAATTAAGTGAATT+TGG - chr1_1:12034728-12034747 None:intergenic 35.0%
AATGTGAAAAAAGCAAAGGG+AGG + chr1_1:12035158-12035177 Msa0008350:intron 35.0%
TACTCTACAATGAGAGAGTT+TGG - chr1_1:12035232-12035251 None:intergenic 35.0%
!! GGTGCGTACAATAATTTGTT+TGG + chr1_1:12035305-12035324 Msa0008350:intron 35.0%
! TAACGAGTGGTCAATTTTCA+TGG + chr1_1:12035332-12035351 Msa0008350:intron 35.0%
! AACGAGTGGTCAATTTTCAT+GGG + chr1_1:12035333-12035352 Msa0008350:intron 35.0%
! GTCAATTTTCATGGGCTTAA+TGG + chr1_1:12035341-12035360 Msa0008350:intron 35.0%
GCATAAAATATGTAAGGTCC+GGG + chr1_1:12035741-12035760 Msa0008350:intron 35.0%
CATAAAATATGTAAGGTCCG+GGG + chr1_1:12035742-12035761 Msa0008350:intron 35.0%
GATTAATGAGTTACTCCCTT+CGG + chr1_1:12035933-12035952 Msa0008350:intron 35.0%
TGCTTATAATAGTGACCGAA+GGG - chr1_1:12035951-12035970 None:intergenic 35.0%
TTGCTTATAATAGTGACCGA+AGG - chr1_1:12035952-12035971 None:intergenic 35.0%
ACTTTAATACTTACTCCCTC+CGG - chr1_1:12036086-12036105 None:intergenic 35.0%
! TAGCTAGTTTATCTCTCAGA+AGG + chr1_1:12036250-12036269 Msa0008350:intron 35.0%
!! GCTGATTTTATGGCTAAGAA+GGG - chr1_1:12036333-12036352 None:intergenic 35.0%
!!! TGCTGATTTTATGGCTAAGA+AGG - chr1_1:12036334-12036353 None:intergenic 35.0%
TATCAACTTTCAGGGCTTAA+TGG + chr1_1:12036907-12036926 Msa0008350:intron 35.0%
GTACAATAGAAAAATGACGG+TGG - chr1_1:12037479-12037498 None:intergenic 35.0%
TAGATTCGTCTCAAAATGAG+TGG - chr1_1:12037674-12037693 None:intergenic 35.0%
TTCACATGGATATAAAGGAC+GGG + chr1_1:12037767-12037786 Msa0008350:intron 35.0%
ATGTGTATGACATTTAGGTG+GGG + chr1_1:12038089-12038108 Msa0008350:intron 35.0%
CAAGAACCCTTTATATAACG+AGG - chr1_1:12038176-12038195 None:intergenic 35.0%
!! AGAAGTACTTCTAGTTGAGA+TGG - chr1_1:12038216-12038235 None:intergenic 35.0%
TCTCTTGAATCTTTCTCAAC+TGG + chr1_1:12038233-12038252 Msa0008350:intron 35.0%
TCAAATGTAGGTTATGCAAG+TGG + chr1_1:12038439-12038458 Msa0008350:intron 35.0%
CAAATGTAGGTTATGCAAGT+GGG + chr1_1:12038440-12038459 Msa0008350:intron 35.0%
TATTACCACCTCAACTTTAC+TGG + chr1_1:12038477-12038496 Msa0008350:CDS 35.0%
!! TAATCACTTTTAACACGTGG+AGG - chr1_1:12038581-12038600 None:intergenic 35.0%
!! TTACCGTTTTTAACTGAAGC+TGG + chr1_1:12039164-12039183 Msa0008350:intron 35.0%
TAAAGAGAAAGCAACATCGT+CGG + chr1_1:12039196-12039215 Msa0008350:CDS 35.0%
GTATATGCTAGACTCAGAAA+AGG + chr1_1:12039236-12039255 Msa0008350:CDS 35.0%
TGAATTTGACTCTCATTGAG+TGG - chr1_1:12039326-12039345 None:intergenic 35.0%
ATGGAATTAGCAACTTCTCT+AGG - chr1_1:12030774-12030793 None:intergenic 35.0%
TTTCATCAAGGAAGGATCAA+AGG + chr1_1:12039529-12039548 Msa0008350:CDS 35.0%
TTTCCATCAACACCTTCTAA+AGG - chr1_1:12039857-12039876 None:intergenic 35.0%
ATGTGCTTAAAGTTCAACCT+GGG + chr1_1:12039945-12039964 Msa0008350:CDS 35.0%
AGAAAATGGCATCAAAGGAG+AGG + chr1_1:12022122-12022141 Msa0008350:CDS 40.0%
! GGCAAAAGGTGTGAAGAAAT+TGG + chr1_1:12022269-12022288 Msa0008350:intron 40.0%
GTCACACTGATACTTCACAA+TGG + chr1_1:12022433-12022452 Msa0008350:CDS 40.0%
AAGTGCTCAAAGTTCAACCT+GGG + chr1_1:12022478-12022497 Msa0008350:CDS 40.0%
AAACAACATGATCCTGTGGA+AGG - chr1_1:12022524-12022543 None:intergenic 40.0%
TTCCACAGGATCATGTTGTT+TGG + chr1_1:12022523-12022542 Msa0008350:intron 40.0%
! TCCACAGGATCATGTTGTTT+GGG + chr1_1:12022524-12022543 Msa0008350:intron 40.0%
AATCCTTCTGTTCAGACACT+CGG - chr1_1:12022902-12022921 None:intergenic 40.0%
ACAGAATGTAAACAATCGCC+TGG + chr1_1:12022971-12022990 Msa0008350:intron 40.0%
ATGTTACAAAAACGCCTTGC+TGG + chr1_1:12023648-12023667 Msa0008350:intron 40.0%
! CCTCTGTACCTTTTCGTTTT+TGG - chr1_1:12023765-12023784 None:intergenic 40.0%
! CCAAAAACGAAAAGGTACAG+AGG + chr1_1:12023762-12023781 Msa0008350:intron 40.0%
TAATATAGTTCGGGACCATC+TGG - chr1_1:12023838-12023857 None:intergenic 40.0%
ATGGTCCCGAACTATATTAC+AGG + chr1_1:12023839-12023858 Msa0008350:intron 40.0%
TGGTCCCGAACTATATTACA+GGG + chr1_1:12023840-12023859 Msa0008350:intron 40.0%
AACTATGATGTGTGGAGCAA+AGG + chr1_1:12024141-12024160 Msa0008350:intron 40.0%
ACAGCACCTAGATCTAATCT+AGG + chr1_1:12024210-12024229 Msa0008350:intron 40.0%
AGCTCAAAACCACAAGCATA+TGG + chr1_1:12024246-12024265 Msa0008350:intron 40.0%
TTCTTGCTTCCATATGCTTG+TGG - chr1_1:12024258-12024277 None:intergenic 40.0%
CAAGAGATGATTACCCAGTT+CGG + chr1_1:12024296-12024315 Msa0008350:intron 40.0%
CATTGGTGAGATTGGGAAAA+TGG - chr1_1:12024454-12024473 None:intergenic 40.0%
! GTCTTGTTCATTGGTGAGAT+TGG - chr1_1:12024462-12024481 None:intergenic 40.0%
! CAATGATTTTCACTCACCCA+AGG + chr1_1:12024485-12024504 Msa0008350:intron 40.0%
GGGAAACATTGTAAACACCT+TGG - chr1_1:12024505-12024524 None:intergenic 40.0%
CTTTGTAGTGAGGTTCTCTT+GGG - chr1_1:12024530-12024549 None:intergenic 40.0%
TCTTTGTAGTGAGGTTCTCT+TGG - chr1_1:12024531-12024550 None:intergenic 40.0%
! AAAGCGTGACACGATTTTGA+CGG - chr1_1:12024662-12024681 None:intergenic 40.0%
!!! GCAAGTTTTGAGGATAAGGT+TGG - chr1_1:12024727-12024746 None:intergenic 40.0%
! GGAAAACGTGACACGATTTT+CGG - chr1_1:12024758-12024777 None:intergenic 40.0%
AACACAATCGTGACACGATT+TGG - chr1_1:12024850-12024869 None:intergenic 40.0%
CTTCACAGCTATGAAGCAAA+TGG - chr1_1:12024952-12024971 None:intergenic 40.0%
TGCATCAGGACAAGAACATA+TGG - chr1_1:12025027-12025046 None:intergenic 40.0%
CATATACCCAATTCCTTCCT+TGG - chr1_1:12025299-12025318 None:intergenic 40.0%
TCCATACGATGAAGAAGCTA+TGG + chr1_1:12025447-12025466 Msa0008350:intron 40.0%
TCCATAGCTTCTTCATCGTA+TGG - chr1_1:12025451-12025470 None:intergenic 40.0%
CCAGAAACGAAAAGTTACAG+AGG - chr1_1:12025643-12025662 None:intergenic 40.0%
! CCTCTGTAACTTTTCGTTTC+TGG + chr1_1:12025640-12025659 Msa0008350:intron 40.0%
AATTTAGGTGGTCTTCCAGA+TGG - chr1_1:12025693-12025712 None:intergenic 40.0%
TTGGTCCCTATAGTATAGTC+GGG + chr1_1:12025773-12025792 Msa0008350:intron 40.0%
TGACTAGGCTAAACATGCTT+AGG - chr1_1:12025816-12025835 None:intergenic 40.0%
!!! AGTCAAAGGGTGCTTCTTTT+AGG - chr1_1:12026480-12026499 None:intergenic 40.0%
! GGTGATAGTTTTCCAGGAAA+TGG - chr1_1:12026839-12026858 None:intergenic 40.0%
! ATTTGCGGTGATAGTTTTCC+AGG - chr1_1:12026845-12026864 None:intergenic 40.0%
GTATGTTCAGAGGGATTGTT+TGG + chr1_1:12026884-12026903 Msa0008350:intron 40.0%
GATTGTTTGGCTACTATCAC+CGG + chr1_1:12026897-12026916 Msa0008350:intron 40.0%
TTGCTGCGAATGAGATGTAA+TGG + chr1_1:12027505-12027524 Msa0008350:intron 40.0%
TGAACTGCACTAAACCACAA+CGG + chr1_1:12027732-12027751 Msa0008350:intron 40.0%
!!! TGTTTTTTGTGTGCTGGACT+TGG - chr1_1:12027943-12027962 None:intergenic 40.0%
CCGCTTGTTTGTTTGAGTAT+GGG - chr1_1:12027980-12027999 None:intergenic 40.0%
CCCATACTCAAACAAACAAG+CGG + chr1_1:12027977-12027996 Msa0008350:intron 40.0%
TCCGCTTGTTTGTTTGAGTA+TGG - chr1_1:12027981-12028000 None:intergenic 40.0%
!! TTTTTGGCCATCAAAGATGG+TGG - chr1_1:12028009-12028028 None:intergenic 40.0%
CAATTCCCTTGTTCTACATG+AGG - chr1_1:12028205-12028224 None:intergenic 40.0%
TCTCGTTTCGATCTTGGATT+GGG - chr1_1:12028270-12028289 None:intergenic 40.0%
GACATGCATATGTGTGCTAA+CGG - chr1_1:12028359-12028378 None:intergenic 40.0%
TAACTGATAAGCACCACGAA+CGG + chr1_1:12028532-12028551 Msa0008350:intron 40.0%
ACGAACGGAATAACCAATCA+CGG + chr1_1:12028547-12028566 Msa0008350:intron 40.0%
TTACTAAACCACACCGACAA+AGG + chr1_1:12028774-12028793 Msa0008350:intron 40.0%
TATTTCGTGTGTCTAGTGCT+AGG + chr1_1:12029033-12029052 Msa0008350:intron 40.0%
ATTTCGTGTGTCTAGTGCTA+GGG + chr1_1:12029034-12029053 Msa0008350:intron 40.0%
! GAAGTAATTTTGTACTCCCC+CGG + chr1_1:12029077-12029096 Msa0008350:intron 40.0%
CTCATAATAATCAAGACCGG+GGG - chr1_1:12029096-12029115 None:intergenic 40.0%
GACTTCCAGTAATATTGAGG+TGG - chr1_1:12029730-12029749 None:intergenic 40.0%
AGAAGATCAGTAATGGCGTT+TGG - chr1_1:12029775-12029794 None:intergenic 40.0%
AGGGTGTAGAAGATCAGTAA+TGG - chr1_1:12029782-12029801 None:intergenic 40.0%
ATTACTGATCTTCTACACCC+TGG + chr1_1:12029781-12029800 Msa0008350:CDS 40.0%
TTGAGTTCAAACTCGTACGA+AGG - chr1_1:12030173-12030192 None:intergenic 40.0%
GTAGATGTTGGAGTCAGAAA+AGG + chr1_1:12030540-12030559 Msa0008350:CDS 40.0%
TGTGAAGCAAATGGCATCAA+AGG + chr1_1:12030891-12030910 Msa0008350:CDS 40.0%
! TGAAGCTGTTTCAACAGAAG+TGG + chr1_1:12030986-12031005 Msa0008350:CDS 40.0%
GTTTCCATCAACACATTCCA+AGG - chr1_1:12031165-12031184 None:intergenic 40.0%
CATGAGCTTAAAGTTCAACC+TGG + chr1_1:12031251-12031270 Msa0008350:CDS 40.0%
! TGATGATGCAGTAGTGTATG+TGG + chr1_1:12031476-12031495 Msa0008350:intron 40.0%
CAGTAGTGTATGTGGAAAGT+AGG + chr1_1:12031484-12031503 Msa0008350:intron 40.0%
AAATAATGGTGGTAAGGAGG+GGG - chr1_1:12031971-12031990 None:intergenic 40.0%
GAAATAATGGTGGTAAGGAG+GGG - chr1_1:12031972-12031991 None:intergenic 40.0%
GGAAATAATGGTGGTAAGGA+GGG - chr1_1:12031973-12031992 None:intergenic 40.0%
GATGGGAAATAATGGTGGTA+AGG - chr1_1:12031977-12031996 None:intergenic 40.0%
!! AGGATGATGGGAAATAATGG+TGG - chr1_1:12031982-12032001 None:intergenic 40.0%
TTGGTTGTGTTGAGGATGAT+GGG - chr1_1:12031994-12032013 None:intergenic 40.0%
TTTGGTTGTGTTGAGGATGA+TGG - chr1_1:12031995-12032014 None:intergenic 40.0%
! AAGGTCTTGTACCGAGATTT+CGG + chr1_1:12032036-12032055 Msa0008350:intron 40.0%
AAACAGTCAAAAACGGTACC+GGG - chr1_1:12032085-12032104 None:intergenic 40.0%
GTTTCTCTGGTGTATTGTGT+CGG - chr1_1:12032187-12032206 None:intergenic 40.0%
AACTGAATCAAAGAGGAAGG+AGG - chr1_1:12032221-12032240 None:intergenic 40.0%
CTGAACTGAATCAAAGAGGA+AGG - chr1_1:12032224-12032243 None:intergenic 40.0%
ATGGCTGAACTGAATCAAAG+AGG - chr1_1:12032228-12032247 None:intergenic 40.0%
ATATTACCAACTTGGAGTGG+AGG - chr1_1:12032270-12032289 None:intergenic 40.0%
CACAACAACACCAACATAAG+AGG - chr1_1:12032304-12032323 None:intergenic 40.0%
!! CTCTTATGTTGGTGTTGTTG+TGG + chr1_1:12032302-12032321 Msa0008350:intron 40.0%
AAATGTTGCCATGCAGATTG+CGG - chr1_1:12032544-12032563 None:intergenic 40.0%
!! GTCATTGTTGATAACGATGG+TGG - chr1_1:12032625-12032644 None:intergenic 40.0%
!! GTGGTCATTGTTGATAACGA+TGG - chr1_1:12032628-12032647 None:intergenic 40.0%
AGAAAGATGACGACAGAAGT+TGG + chr1_1:12032729-12032748 Msa0008350:intron 40.0%
CTGAACGAAAGATGAAAGTG+TGG + chr1_1:12032785-12032804 Msa0008350:intron 40.0%
GAGAGATGGATATGAGAAGA+AGG + chr1_1:12032902-12032921 Msa0008350:intron 40.0%
GATGGATATGAGAAGAAGGT+TGG + chr1_1:12032906-12032925 Msa0008350:intron 40.0%
! GATATGAGAAGAAGGTTGGT+GGG + chr1_1:12032910-12032929 Msa0008350:intron 40.0%
CAAGTATGCTAAAGCGATGA+CGG + chr1_1:12032990-12033009 Msa0008350:intron 40.0%
GGAAAGAAGAGAGAGAAAGA+GGG + chr1_1:12033083-12033102 Msa0008350:intron 40.0%
GAAAGAAGAGAGAGAAAGAG+GGG + chr1_1:12033084-12033103 Msa0008350:intron 40.0%
AAAGAAGAGAGAGAAAGAGG+GGG + chr1_1:12033085-12033104 Msa0008350:intron 40.0%
TAATAAAGGAGGGATGGATG+AGG + chr1_1:12033301-12033320 Msa0008350:intron 40.0%
AATAAAGGAGGGATGGATGA+GGG + chr1_1:12033302-12033321 Msa0008350:intron 40.0%
AGATATGAGAGAGAGGGATA+TGG + chr1_1:12033350-12033369 Msa0008350:intron 40.0%
AGGGAGGTAAGATATAGAGA+GGG + chr1_1:12033417-12033436 Msa0008350:intron 40.0%
TCGGTGTGCAATTCATAAAC+TGG + chr1_1:12033940-12033959 Msa0008350:intron 40.0%
CCGACAACACAACTAATTGT+TGG - chr1_1:12034047-12034066 None:intergenic 40.0%
AACCACCCATGTATGGTTAA+TGG + chr1_1:12034557-12034576 Msa0008350:intron 40.0%
TTCCATTAACCATACATGGG+TGG - chr1_1:12034562-12034581 None:intergenic 40.0%
GGGCAATTAAGTGAATTTGG+TGG - chr1_1:12034725-12034744 None:intergenic 40.0%
AGCAAAGGGAGGTTACATTA+AGG + chr1_1:12035169-12035188 Msa0008350:intron 40.0%
GCAAAGGGAGGTTACATTAA+GGG + chr1_1:12035170-12035189 Msa0008350:intron 40.0%
AGGTTACATTAAGGGACAGA+GGG + chr1_1:12035178-12035197 Msa0008350:intron 40.0%
TTTGTTTGGTCTCTAACGAG+TGG + chr1_1:12035319-12035338 Msa0008350:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr1_1:12036067-12036086 Msa0008350:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr1_1:12036068-12036087 Msa0008350:intron 40.0%
AACTCCAAACTCTCTCATTG+TGG + chr1_1:12035225-12035244 Msa0008350:intron 40.0%
TACTCCACAATGAGAGAGTT+TGG - chr1_1:12036405-12036424 None:intergenic 40.0%
! TATTTGCACTGCACTTGTTG+TGG - chr1_1:12037180-12037199 None:intergenic 40.0%
AAAACACTTGTGCTTTCGCA+CGG - chr1_1:12037418-12037437 None:intergenic 40.0%
CAGCACCCTAAGAAGAAATA+AGG + chr1_1:12037977-12037996 Msa0008350:intron 40.0%
TCGTCATTGCAAGTCAAGTT+AGG - chr1_1:12038017-12038036 None:intergenic 40.0%
!!! GATGCATGCACCTTTGTTTT+CGG + chr1_1:12038143-12038162 Msa0008350:intron 40.0%
AGGGACAAAACCGAAAACAA+AGG - chr1_1:12038156-12038175 None:intergenic 40.0%
ATGGACTTCCAGTAAAGTTG+AGG - chr1_1:12038488-12038507 None:intergenic 40.0%
! TTAGTGATGGCTTTTGGCAT+TGG - chr1_1:12038524-12038543 None:intergenic 40.0%
! AGCAGATTAGTGATGGCTTT+TGG - chr1_1:12038530-12038549 None:intergenic 40.0%
AAAGAGAAAGCAACATCGTC+GGG + chr1_1:12039197-12039216 Msa0008350:CDS 40.0%
! AGACTCAGAAAAGGGTATGA+AGG + chr1_1:12039245-12039264 Msa0008350:CDS 40.0%
ATAAGTGCGTGTGAAGCAAA+TGG + chr1_1:12039575-12039594 Msa0008350:CDS 40.0%
TGTGAAGCAAATGGCATCAA+AGG + chr1_1:12030891-12030910 Msa0008350:CDS 40.0%
AGCGAAAGGAGTGAAGAAAT+TGG + chr1_1:12039736-12039755 Msa0008350:CDS 40.0%
GCGAAAGGAGTGAAGAAATT+GGG + chr1_1:12039737-12039756 Msa0008350:CDS 40.0%
GTTTACTCTGTGCCTTTAGA+AGG + chr1_1:12039842-12039861 Msa0008350:CDS 40.0%
!! AGAAGGTGTTGATGGAAACA+TGG + chr1_1:12039859-12039878 Msa0008350:CDS 40.0%
GTCACACTGATACATCAGAA+TGG + chr1_1:12039900-12039919 Msa0008350:CDS 40.0%
CATGTGCTTAAAGTTCAACC+TGG + chr1_1:12039944-12039963 Msa0008350:CDS 40.0%
GTTTACTCTGTGCCTTTGGA+AGG + chr1_1:12022375-12022394 Msa0008350:CDS 45.0%
CTTCCATCAACACCTTCCAA+AGG - chr1_1:12022390-12022409 None:intergenic 45.0%
CAAGTGCTCAAAGTTCAACC+TGG + chr1_1:12022477-12022496 Msa0008350:CDS 45.0%
TGTGGAAGGAAGTGACAAAC+TGG - chr1_1:12022510-12022529 None:intergenic 45.0%
! AGTTTGTCACTTCCTTCCAC+AGG + chr1_1:12022509-12022528 Msa0008350:intron 45.0%
ACCCAAACAACATGATCCTG+TGG - chr1_1:12022528-12022547 None:intergenic 45.0%
! TAGGGAGTGATAGCGATTTC+CGG + chr1_1:12022866-12022885 Msa0008350:intron 45.0%
GACACTCGGTAATCTACTTC+CGG - chr1_1:12022888-12022907 None:intergenic 45.0%
TTACCGAGTGTCTGAACAGA+AGG + chr1_1:12022896-12022915 Msa0008350:intron 45.0%
AGCAGAATAGTTGTCTTGCC+AGG - chr1_1:12022992-12023011 None:intergenic 45.0%
! AAAAACGCCTTGCTGGCTAA+CGG + chr1_1:12023655-12023674 Msa0008350:intron 45.0%
CTTGGCTAAACACGCTTATG+TGG + chr1_1:12023700-12023719 Msa0008350:intron 45.0%
AATTCATGTGGCCTTCCAGA+TGG + chr1_1:12023820-12023839 Msa0008350:intron 45.0%
TAGCAGGGTATGTGATTCCA+GGG - chr1_1:12024000-12024019 None:intergenic 45.0%
TTAGCAGGGTATGTGATTCC+AGG - chr1_1:12024001-12024020 None:intergenic 45.0%
CGAACTGGGTAATCATCTCT+TGG - chr1_1:12024298-12024317 None:intergenic 45.0%
GTCCTAACTTGACCTACTCT+GGG + chr1_1:12024318-12024337 Msa0008350:intron 45.0%
TCCTAACTTGACCTACTCTG+GGG + chr1_1:12024319-12024338 Msa0008350:intron 45.0%
TAGTGAGGTTCTCTTGGGTT+GGG - chr1_1:12024525-12024544 None:intergenic 45.0%
GGTTGAGTGTCTTTGTAGTG+AGG - chr1_1:12024540-12024559 None:intergenic 45.0%
CTGCAAAGGAGGGAACTTTA+GGG - chr1_1:12024561-12024580 None:intergenic 45.0%
ACTGCAAAGGAGGGAACTTT+AGG - chr1_1:12024562-12024581 None:intergenic 45.0%
AAACTTGGGACTGCAAAGGA+GGG - chr1_1:12024571-12024590 None:intergenic 45.0%
AGAGAAACTTGGGACTGCAA+AGG - chr1_1:12024575-12024594 None:intergenic 45.0%
TTCCCAAATCGTGACACGTT+TGG + chr1_1:12024680-12024699 Msa0008350:intron 45.0%
CACCAAACGTGTCACGATTT+GGG - chr1_1:12024685-12024704 None:intergenic 45.0%
! GATAAGGTTGGTCGTACCTT+GGG - chr1_1:12024715-12024734 None:intergenic 45.0%
!!! CTGGGCAAGTTTTGAGGATA+AGG - chr1_1:12024731-12024750 None:intergenic 45.0%
TCCAATCGTGACACGATTTC+GGG - chr1_1:12024779-12024798 None:intergenic 45.0%
GTCCAATCGTGACACGATTT+CGG - chr1_1:12024780-12024799 None:intergenic 45.0%
! TGGCAAGCGTGTCAAGATTT+TGG - chr1_1:12024830-12024849 None:intergenic 45.0%
CTGAAACTCGCATCAAAGGA+TGG + chr1_1:12024925-12024944 Msa0008350:intron 45.0%
AAGGCGATAACTTTGCCACA+TGG + chr1_1:12024979-12024998 Msa0008350:intron 45.0%
! CTTTTCTTGTGAGGTGACCA+AGG + chr1_1:12025279-12025298 Msa0008350:intron 45.0%
AGGTGACCAAGGAAGGAATT+GGG + chr1_1:12025290-12025309 Msa0008350:intron 45.0%
AGCAGGGCATATGATTTCAG+AGG + chr1_1:12025515-12025534 Msa0008350:intron 45.0%
CTAGGCTAAACATGCTTAGG+TGG - chr1_1:12025813-12025832 None:intergenic 45.0%
! TCCTTTTCGCATATCTCACG+TGG + chr1_1:12026156-12026175 Msa0008350:intron 45.0%
TCCACGTGAGATATGCGAAA+AGG - chr1_1:12026160-12026179 None:intergenic 45.0%
! CAAACTCTGCTAGCATCGAA+CGG + chr1_1:12027566-12027585 Msa0008350:intron 45.0%
!! TCACTCCTTGTGGTGGATAA+AGG - chr1_1:12028050-12028069 None:intergenic 45.0%
CTACATGAGGTTCAATTGCG+AGG - chr1_1:12028192-12028211 None:intergenic 45.0%
! ATCTTGGATTGGGGTTTCCA+TGG - chr1_1:12028260-12028279 None:intergenic 45.0%
CTCGTTTCGATCTTGGATTG+GGG - chr1_1:12028269-12028288 None:intergenic 45.0%
CTCTCGTTTCGATCTTGGAT+TGG - chr1_1:12028271-12028290 None:intergenic 45.0%
TTGGTCTCTCGTTTCGATCT+TGG - chr1_1:12028276-12028295 None:intergenic 45.0%
CATATGTGTGCTAACGGTTG+TGG - chr1_1:12028353-12028372 None:intergenic 45.0%
GTTGTCGACCAAGGACAATT+TGG - chr1_1:12028405-12028424 None:intergenic 45.0%
TTTGGAGACTTCTTCGAGAC+AGG - chr1_1:12028427-12028446 None:intergenic 45.0%
! GTGATTGGTTATTCCGTTCG+TGG - chr1_1:12028548-12028567 None:intergenic 45.0%
CGAACGGAATAACCAATCAC+GGG + chr1_1:12028548-12028567 Msa0008350:intron 45.0%
GAATAACCAATCACGGGATC+TGG + chr1_1:12028554-12028573 Msa0008350:intron 45.0%
ATTAGGAGGAGGAGATGCTA+GGG - chr1_1:12028650-12028669 None:intergenic 45.0%
!! TGACATGTTTGGTTCTGGGT+GGG - chr1_1:12028715-12028734 None:intergenic 45.0%
!! TGGCTGACATGTTTGGTTCT+GGG - chr1_1:12028719-12028738 None:intergenic 45.0%
AGTCAATTAGTCGAGTACGG+TGG - chr1_1:12028739-12028758 None:intergenic 45.0%
TTCTGGACAGACCTATGGAT+AGG - chr1_1:12028807-12028826 None:intergenic 45.0%
CTTTCTTCTGGACAGACCTA+TGG - chr1_1:12028812-12028831 None:intergenic 45.0%
!!! AAGGTGCATGCAGCCTTTTT+TGG - chr1_1:12029349-12029368 None:intergenic 45.0%
TCAATTGCAGCTTGTGCTAG+TGG + chr1_1:12029684-12029703 Msa0008350:intron 45.0%
CAATTGCAGCTTGTGCTAGT+GGG + chr1_1:12029685-12029704 Msa0008350:intron 45.0%
CATTGGAGAGTTGGGAAGAA+TGG - chr1_1:12029752-12029771 None:intergenic 45.0%
TCAGTAATGGCGTTTGGCAT+TGG - chr1_1:12029769-12029788 None:intergenic 45.0%
!! ATGATGGATGTAAGCAAGGG+TGG + chr1_1:12030516-12030535 Msa0008350:CDS 45.0%
! GGAGTCAGAAAAGGGTATGA+AGG + chr1_1:12030549-12030568 Msa0008350:intron 45.0%
! GTCAGAAAAGGGTATGAAGG+AGG + chr1_1:12030552-12030571 Msa0008350:intron 45.0%
! AGAAAAGGGTATGAAGGAGG+TGG + chr1_1:12030555-12030574 Msa0008350:intron 45.0%
AGCAAATGGCATCAAAGGTG+AGG + chr1_1:12030896-12030915 Msa0008350:CDS 45.0%
TGAAGTTTACTCTGTGCCCT+TGG + chr1_1:12031145-12031164 Msa0008350:CDS 45.0%
GTCACACGGATACATCAGAA+TGG + chr1_1:12031207-12031226 Msa0008350:CDS 45.0%
TGACAAATAGGAACAGTCCC+AGG - chr1_1:12031272-12031291 None:intergenic 45.0%
TGTGGGAGGATGTGACAAAT+AGG - chr1_1:12031284-12031303 None:intergenic 45.0%
TATTTGTCACATCCTCCCAC+AGG + chr1_1:12031283-12031302 Msa0008350:CDS 45.0%
AAACAACATGATCCTGTGGG+AGG - chr1_1:12031298-12031317 None:intergenic 45.0%
TCCCACAGGATCATGTTGTT+TGG + chr1_1:12031297-12031316 Msa0008350:intron 45.0%
CCCAAACAACATGATCCTGT+GGG - chr1_1:12022527-12022546 None:intergenic 45.0%
! CCCACAGGATCATGTTGTTT+GGG + chr1_1:12031298-12031317 Msa0008350:intron 45.0%
ACCCAAACAACATGATCCTG+TGG - chr1_1:12022528-12022547 None:intergenic 45.0%
GGGAAATAATGGTGGTAAGG+AGG - chr1_1:12031974-12031993 None:intergenic 45.0%
GGCTGTTACAAAACAGCCAT+GGG + chr1_1:12032057-12032076 Msa0008350:intron 45.0%
! CTGGTGTATTGTGTCGGTAA+CGG - chr1_1:12032181-12032200 None:intergenic 45.0%
AAGAGGAAGGAGGATGGTAA+CGG - chr1_1:12032211-12032230 None:intergenic 45.0%
GAATCAAAGAGGAAGGAGGA+TGG - chr1_1:12032217-12032236 None:intergenic 45.0%
AATCTCCCTCCCTCTTATGT+TGG + chr1_1:12032291-12032310 Msa0008350:intron 45.0%
CAACACCAACATAAGAGGGA+GGG - chr1_1:12032299-12032318 None:intergenic 45.0%
ACAACACCAACATAAGAGGG+AGG - chr1_1:12032300-12032319 None:intergenic 45.0%
! AACGATGGTGGTTGTGATCA+AGG - chr1_1:12032613-12032632 None:intergenic 45.0%
AAGATGACGACAGAAGTTGG+TGG + chr1_1:12032732-12032751 Msa0008350:intron 45.0%
ACACAGTGGTGTGATGATAG+TGG + chr1_1:12032868-12032887 Msa0008350:intron 45.0%
GGATATGAGAAGAAGGTTGG+TGG + chr1_1:12032909-12032928 Msa0008350:intron 45.0%
! GGTGTTATAACACGGATCTG+AGG + chr1_1:12032946-12032965 Msa0008350:intron 45.0%
TATAACACGGATCTGAGGAG+AGG + chr1_1:12032951-12032970 Msa0008350:intron 45.0%
ATAACACGGATCTGAGGAGA+GGG + chr1_1:12032952-12032971 Msa0008350:intron 45.0%
CGTCATCGCTTTAGCATACT+TGG - chr1_1:12032992-12033011 None:intergenic 45.0%
AGGTGAGAGAAAGGAAACAG+TGG + chr1_1:12033058-12033077 Msa0008350:intron 45.0%
TGAGAGAAAGGAAACAGTGG+AGG + chr1_1:12033061-12033080 Msa0008350:intron 45.0%
GAGAGAAAGGAAACAGTGGA+GGG + chr1_1:12033062-12033081 Msa0008350:intron 45.0%
GGGAAAGAAGAGAGAGAAAG+AGG + chr1_1:12033082-12033101 Msa0008350:intron 45.0%
AAGAAGAGAGAGAAAGAGGG+GGG + chr1_1:12033086-12033105 Msa0008350:intron 45.0%
AGGGTGAGATATGAGAGAGA+GGG + chr1_1:12033344-12033363 Msa0008350:intron 45.0%
TTAGGAAAGAGAGCTAGCAG+AGG + chr1_1:12033397-12033416 Msa0008350:intron 45.0%
TAGGAAAGAGAGCTAGCAGA+GGG + chr1_1:12033398-12033417 Msa0008350:intron 45.0%
GAGGGAGGTAAGATATAGAG+AGG + chr1_1:12033416-12033435 Msa0008350:intron 45.0%
AATGCTAACTGGTGCCCTTA+AGG + chr1_1:12033580-12033599 Msa0008350:intron 45.0%
TAAGTCATTCAAACGCACCG+TGG + chr1_1:12033902-12033921 Msa0008350:intron 45.0%
TCGGTAACACTAGATCCCTT+AGG + chr1_1:12034063-12034082 Msa0008350:intron 45.0%
CTTAGATCATACGGTCGAAC+CGG + chr1_1:12034227-12034246 Msa0008350:intron 45.0%
CAACAACAACCACCCATGTA+TGG + chr1_1:12034550-12034569 Msa0008350:intron 45.0%
GAGGTTACATTAAGGGACAG+AGG + chr1_1:12035177-12035196 Msa0008350:intron 45.0%
ATCCCAATGAGCTGAAGAAG+CGG + chr1_1:12036299-12036318 Msa0008350:intron 45.0%
TTCCGCTTCTTCAGCTCATT+GGG - chr1_1:12036304-12036323 None:intergenic 45.0%
ATTCCGCTTCTTCAGCTCAT+TGG - chr1_1:12036305-12036324 None:intergenic 45.0%
AATGAGCTGAAGAAGCGGAA+TGG + chr1_1:12036304-12036323 Msa0008350:intron 45.0%
ATGAGCTGAAGAAGCGGAAT+GGG + chr1_1:12036305-12036324 Msa0008350:intron 45.0%
GCACGGGTCATATAACATTG+CGG - chr1_1:12037401-12037420 None:intergenic 45.0%
AAACACTTGTGCTTTCGCAC+GGG - chr1_1:12037417-12037436 None:intergenic 45.0%
GTTACTTAACCAGTGCCCAA+AGG + chr1_1:12037944-12037963 Msa0008350:intron 45.0%
TGCTGTTAACTGGTGCCTTT+GGG - chr1_1:12037962-12037981 None:intergenic 45.0%
!! CTTCTTAGGGTGCTGTTAAC+TGG - chr1_1:12037972-12037991 None:intergenic 45.0%
TCAGCTTCACTGATCCAACA+TGG + chr1_1:12038260-12038279 Msa0008350:intron 45.0%
GACTTCCAGTAAAGTTGAGG+TGG - chr1_1:12038485-12038504 None:intergenic 45.0%
!! GCTTTTGGCATTGGAGAGTT+GGG - chr1_1:12038515-12038534 None:intergenic 45.0%
AGGGTGTAGCAGATTAGTGA+TGG - chr1_1:12038537-12038556 None:intergenic 45.0%
ATCACTAATCTGCTACACCC+TGG + chr1_1:12038536-12038555 Msa0008350:CDS 45.0%
CATTGCGTGAATAGTGCATG+TGG + chr1_1:12038890-12038909 Msa0008350:intron 45.0%
! CTCAGAAAAGGGTATGAAGG+AGG + chr1_1:12039248-12039267 Msa0008350:CDS 45.0%
! AGAAAAGGGTATGAAGGAGG+TGG + chr1_1:12030555-12030574 Msa0008350:intron 45.0%
AGCAAATGGCATCAAAGGTG+AGG + chr1_1:12030896-12030915 Msa0008350:CDS 45.0%
!! GTGCCTTTAGAAGGTGTTGA+TGG + chr1_1:12039851-12039870 Msa0008350:CDS 45.0%
AAACAACATGATCCTGTGGG+AGG - chr1_1:12031298-12031317 None:intergenic 45.0%
TCCCACAGGATCATGTTGTT+TGG + chr1_1:12031297-12031316 Msa0008350:intron 45.0%
CCCAAACAACATGATCCTGT+GGG - chr1_1:12022527-12022546 None:intergenic 45.0%
! CCCACAGGATCATGTTGTTT+GGG + chr1_1:12031298-12031317 Msa0008350:intron 45.0%
ACCCAAACAACATGATCCTG+TGG - chr1_1:12022528-12022547 None:intergenic 45.0%
!!! AATAACAAAATTTTAAATTT+AGG - chr1_1:12025708-12025727 None:intergenic 5.0%
!!! AATTTAAAATTTTGTTATTT+TGG + chr1_1:12025709-12025728 Msa0008350:intron 5.0%
!!! AAGTTTTTAAATATTATTTA+TGG + chr1_1:12030397-12030416 Msa0008350:intron 5.0%
!!! TTTTTTTTAAAAAAAAACTT+TGG - chr1_1:12032013-12032032 None:intergenic 5.0%
!! AATTTATAATAAAAATATCT+TGG + chr1_1:12034796-12034815 Msa0008350:intron 5.0%
!! AAAAAATTGATATTATAAAA+TGG - chr1_1:12036941-12036960 None:intergenic 5.0%
!! TATATATATATATATATAGA+AGG + chr1_1:12039067-12039086 Msa0008350:intron 5.0%
!! GTGCCTTTGGAAGGTGTTGA+TGG + chr1_1:12022384-12022403 Msa0008350:CDS 50.0%
TGACAAACTGGAACAGTCCC+AGG - chr1_1:12022498-12022517 None:intergenic 50.0%
ATAGTTCGGGACCATCTGGA+AGG - chr1_1:12023834-12023853 None:intergenic 50.0%
AGCAGGGTATGTGATTCCAG+GGG - chr1_1:12023999-12024018 None:intergenic 50.0%
GGTCAAGTTAGGACCGAACT+GGG - chr1_1:12024312-12024331 None:intergenic 50.0%
AGGTCAAGTTAGGACCGAAC+TGG - chr1_1:12024313-12024332 None:intergenic 50.0%
GGTCCTAACTTGACCTACTC+TGG + chr1_1:12024317-12024336 Msa0008350:intron 50.0%
CCTAACTTGACCTACTCTGG+GGG + chr1_1:12024320-12024339 Msa0008350:intron 50.0%
ATCAATCTCTCCCCCAGAGT+AGG - chr1_1:12024333-12024352 None:intergenic 50.0%
GTAGTGAGGTTCTCTTGGGT+TGG - chr1_1:12024526-12024545 None:intergenic 50.0%
GAAACTTGGGACTGCAAAGG+AGG - chr1_1:12024572-12024591 None:intergenic 50.0%
!! CAGCTCATTTTTGAGAGGGG+AGG - chr1_1:12024615-12024634 None:intergenic 50.0%
!! CACGATTTTGACGGTTGCAG+AGG - chr1_1:12024653-12024672 None:intergenic 50.0%
GCACCAAACGTGTCACGATT+TGG - chr1_1:12024686-12024705 None:intergenic 50.0%
! GGATAAGGTTGGTCGTACCT+TGG - chr1_1:12024716-12024735 None:intergenic 50.0%
!! GACACGATTTTCGGCTTGCT+GGG - chr1_1:12024749-12024768 None:intergenic 50.0%
!! TGACACGATTTTCGGCTTGC+TGG - chr1_1:12024750-12024769 None:intergenic 50.0%
TCCCGAAATCGTGTCACGAT+TGG + chr1_1:12024775-12024794 Msa0008350:intron 50.0%
CACCCTGCAAAACATGCTCA+CGG + chr1_1:12024799-12024818 Msa0008350:intron 50.0%
! TGCCGTGAGCATGTTTTGCA+GGG - chr1_1:12024804-12024823 None:intergenic 50.0%
TCTTGTGAGGTGACCAAGGA+AGG + chr1_1:12025283-12025302 Msa0008350:intron 50.0%
GAGGTGACCAAGGAAGGAAT+TGG + chr1_1:12025289-12025308 Msa0008350:intron 50.0%
! TGCTATTGAGGCCCCTCTTT+TGG - chr1_1:12027885-12027904 None:intergenic 50.0%
GACTCGACCACCATCTTTGA+TGG + chr1_1:12027999-12028018 Msa0008350:intron 50.0%
!! CTCCTTGTGGTGGATAAAGG+CGG - chr1_1:12028047-12028066 None:intergenic 50.0%
CATGAGGTTCAATTGCGAGG+CGG - chr1_1:12028189-12028208 None:intergenic 50.0%
! AAGGACAATTTGGAGGCACG+TGG - chr1_1:12028395-12028414 None:intergenic 50.0%
ACGTGCCTCCAAATTGTCCT+TGG + chr1_1:12028394-12028413 Msa0008350:intron 50.0%
GTCGACCAAGGACAATTTGG+AGG - chr1_1:12028402-12028421 None:intergenic 50.0%
CCACAGACAGGTTCTTGTGA+AGG - chr1_1:12028462-12028481 None:intergenic 50.0%
CCTTCACAAGAACCTGTCTG+TGG + chr1_1:12028459-12028478 Msa0008350:intron 50.0%
GGATTTAGTCTGCCACAGAC+AGG - chr1_1:12028474-12028493 None:intergenic 50.0%
TCGTATTGTGGGGGCAACAT+TGG - chr1_1:12028495-12028514 None:intergenic 50.0%
GATTAGGAGGAGGAGATGCT+AGG - chr1_1:12028651-12028670 None:intergenic 50.0%
AAGACGGTTGTGGGATTAGG+AGG - chr1_1:12028664-12028683 None:intergenic 50.0%
!! CTGACATGTTTGGTTCTGGG+TGG - chr1_1:12028716-12028735 None:intergenic 50.0%
! GTGGCTGACATGTTTGGTTC+TGG - chr1_1:12028720-12028739 None:intergenic 50.0%
AGTACGGTGGCTGACATGTT+TGG - chr1_1:12028726-12028745 None:intergenic 50.0%
GATAGGAGGGGTTCCTTTGT+CGG - chr1_1:12028790-12028809 None:intergenic 50.0%
AAGGAACCCCTCCTATCCAT+AGG + chr1_1:12028793-12028812 Msa0008350:intron 50.0%
GACAGACCTATGGATAGGAG+GGG - chr1_1:12028802-12028821 None:intergenic 50.0%
GGACAGACCTATGGATAGGA+GGG - chr1_1:12028803-12028822 None:intergenic 50.0%
TGGACAGACCTATGGATAGG+AGG - chr1_1:12028804-12028823 None:intergenic 50.0%
! GCTGCATGCACCTTTGTTTC+AGG + chr1_1:12029355-12029374 Msa0008350:intron 50.0%
! GCGTTTGGCATTGGAGAGTT+GGG - chr1_1:12029760-12029779 None:intergenic 50.0%
AGGAGCAATAAGTGGGTGTC+CGG + chr1_1:12029889-12029908 Msa0008350:intron 50.0%
AAAGGTTGGGGTTCAAACCC+CGG - chr1_1:12029911-12029930 None:intergenic 50.0%
AGCAAGGGTGGTGTAGATGT+TGG + chr1_1:12030528-12030547 Msa0008350:CDS 50.0%
GTGCCCTTGGAATGTGTTGA+TGG + chr1_1:12031158-12031177 Msa0008350:CDS 50.0%
CGGCTGTTACAAAACAGCCA+TGG + chr1_1:12032056-12032075 Msa0008350:intron 50.0%
TAGCATCCTCCACTCCAAGT+TGG + chr1_1:12032261-12032280 Msa0008350:intron 50.0%
!! CATGTTGGTTCTCTGAGACG+TGG - chr1_1:12032650-12032669 None:intergenic 50.0%
!! AGTTGGTGGTGATGATGTCG+CGG + chr1_1:12032746-12032765 Msa0008350:intron 50.0%
ACCACCATCGTCATCACTAG+CGG - chr1_1:12032811-12032830 None:intergenic 50.0%
! AGTGATGACGATGGTGGTTG+TGG + chr1_1:12032813-12032832 Msa0008350:intron 50.0%
! GTGATGACGATGGTGGTTGT+GGG + chr1_1:12032814-12032833 Msa0008350:intron 50.0%
! TGATGACGATGGTGGTTGTG+GGG + chr1_1:12032815-12032834 Msa0008350:intron 50.0%
!! CAGTGGTGTGATGATAGTGG+TGG + chr1_1:12032871-12032890 Msa0008350:intron 50.0%
!! TGGTGTGATGATAGTGGTGG+CGG + chr1_1:12032874-12032893 Msa0008350:intron 50.0%
!! ATGAGAAGAAGGTTGGTGGG+TGG + chr1_1:12032913-12032932 Msa0008350:intron 50.0%
!! GTGGTGGCGGTGTTATAACA+CGG + chr1_1:12032938-12032957 Msa0008350:intron 50.0%
TCTGAGGAGAGGGATGATGA+TGG + chr1_1:12032962-12032981 Msa0008350:intron 50.0%
GAGGGATGGATGAGGGAAAA+AGG + chr1_1:12033309-12033328 Msa0008350:intron 50.0%
GAGGGTGAGATATGAGAGAG+AGG + chr1_1:12033343-12033362 Msa0008350:intron 50.0%
! CAGAGAGATAGAGACGGGTT+AGG + chr1_1:12033379-12033398 Msa0008350:intron 50.0%
AAGGTCCGGGGTTCAAACTT+CGG + chr1_1:12035754-12035773 Msa0008350:intron 50.0%
AGTTGCCGAAGTTTGAACCC+CGG - chr1_1:12035762-12035781 None:intergenic 50.0%
AGGAGAGACTCTAAGCCATC+TGG + chr1_1:12036270-12036289 Msa0008350:intron 50.0%
AGAGACTCTAAGCCATCTGG+AGG + chr1_1:12036273-12036292 Msa0008350:intron 50.0%
! GTGCTGTTAACTGGTGCCTT+TGG - chr1_1:12037963-12037982 None:intergenic 50.0%
CATTGGAGAGTTGGGAAGCA+TGG - chr1_1:12038507-12038526 None:intergenic 50.0%
!! GGCTTTTGGCATTGGAGAGT+TGG - chr1_1:12038516-12038535 None:intergenic 50.0%
AACATCGTCGGGTGTAAGCA+AGG + chr1_1:12039208-12039227 Msa0008350:CDS 50.0%
ACATCGTCGGGTGTAAGCAA+GGG + chr1_1:12039209-12039228 Msa0008350:CDS 50.0%
TGACAAACAGGAACAGTCCC+AGG - chr1_1:12039965-12039984 None:intergenic 50.0%
TGTGGGAGGATGTGACAAAC+AGG - chr1_1:12039977-12039996 None:intergenic 50.0%
TGTTTGTCACATCCTCCCAC+AGG + chr1_1:12039976-12039995 Msa0008350:CDS 50.0%
TCATACGCCGTTAGCCAGCA+AGG - chr1_1:12023665-12023684 None:intergenic 55.0%
CTAACGGCGTATGACGTGGT+GGG + chr1_1:12023671-12023690 Msa0008350:intron 55.0%
TTCTTCTTCTTCTGGGCCCC+TGG + chr1_1:12023980-12023999 Msa0008350:intron 55.0%
CCCCCAGAGTAGGTCAAGTT+AGG - chr1_1:12024323-12024342 None:intergenic 55.0%
!!! GGCTTGCTGGGCAAGTTTTG+AGG - chr1_1:12024737-12024756 None:intergenic 55.0%
! GTGCCGTGAGCATGTTTTGC+AGG - chr1_1:12024805-12024824 None:intergenic 55.0%
GCACCTGTCGTTAGCTAGCA+AGG + chr1_1:12025847-12025866 Msa0008350:intron 55.0%
ACGCCTTGCTAGCTAACGAC+AGG - chr1_1:12025853-12025872 None:intergenic 55.0%
! CTCTGCTAGCATCGAACGGT+CGG + chr1_1:12027570-12027589 Msa0008350:intron 55.0%
AGCCGCCTTTATCCACCACA+AGG + chr1_1:12028042-12028061 Msa0008350:intron 55.0%
TCGAGACAGGTTGTCGACCA+AGG - chr1_1:12028414-12028433 None:intergenic 55.0%
GATGCTAGGGCTGGGAATGT+AGG - chr1_1:12028637-12028656 None:intergenic 55.0%
ACGGTTGTGGGATTAGGAGG+AGG - chr1_1:12028661-12028680 None:intergenic 55.0%
GCGAAGACGGTTGTGGGATT+AGG - chr1_1:12028667-12028686 None:intergenic 55.0%
GCAGTTGCGAAGACGGTTGT+GGG - chr1_1:12028673-12028692 None:intergenic 55.0%
!! CATGTTTGGTTCTGGGTGGG+AGG - chr1_1:12028712-12028731 None:intergenic 55.0%
! GGCGTTTGGCATTGGAGAGT+TGG - chr1_1:12029761-12029780 None:intergenic 55.0%
GGAGCAATAAGTGGGTGTCC+GGG + chr1_1:12029890-12029909 Msa0008350:intron 55.0%
GAGCAATAAGTGGGTGTCCG+GGG + chr1_1:12029891-12029910 Msa0008350:intron 55.0%
AATGGTGGTAAGGAGGGGGA+TGG - chr1_1:12031967-12031986 None:intergenic 55.0%
ACAAAACAGCCATGGGCTCC+CGG + chr1_1:12032064-12032083 Msa0008350:intron 55.0%
!! GGATGGTAACGGCGTTTCTC+TGG - chr1_1:12032200-12032219 None:intergenic 55.0%
CATGCAGATTGCGGTTGTCG+CGG - chr1_1:12032535-12032554 None:intergenic 55.0%
!! GTTGGTTCTCTGAGACGTGG+TGG - chr1_1:12032647-12032666 None:intergenic 55.0%
! GATGACGATGGTGGTTGTGG+GGG + chr1_1:12032816-12032835 Msa0008350:intron 55.0%
! ATGACGATGGTGGTTGTGGG+GGG + chr1_1:12032817-12032836 Msa0008350:intron 55.0%
! GGTGGTGGTTGTAGACACAG+TGG + chr1_1:12032854-12032873 Msa0008350:intron 55.0%
!! TGTGATGATAGTGGTGGCGG+TGG + chr1_1:12032877-12032896 Msa0008350:intron 55.0%
!! GTGATGATAGTGGTGGCGGT+GGG + chr1_1:12032878-12032897 Msa0008350:intron 55.0%
!! AGAAGAAGGTTGGTGGGTGG+TGG + chr1_1:12032916-12032935 Msa0008350:intron 55.0%
! GCTAAAGCGATGACGGTCGT+CGG + chr1_1:12032997-12033016 Msa0008350:intron 55.0%
!! AGAGAGGAGTGGTGGATGGT+TGG + chr1_1:12033027-12033046 Msa0008350:intron 55.0%
!! AGGAGTGGTGGATGGTTGGT+GGG + chr1_1:12033031-12033050 Msa0008350:intron 55.0%
GAAAGAGAGCTAGCAGAGGG+AGG + chr1_1:12033401-12033420 Msa0008350:intron 55.0%
CATCGTGAGCTTAGCTCAGC+TGG + chr1_1:12035708-12035727 Msa0008350:intron 55.0%
GTGAGCTTAGCTCAGCTGGT+TGG + chr1_1:12035712-12035731 Msa0008350:intron 55.0%
CATTGGGATCGTCCTCCAGA+TGG - chr1_1:12036288-12036307 None:intergenic 55.0%
TAACTGGTGCCTTTGGGCAC+TGG - chr1_1:12037956-12037975 None:intergenic 55.0%
CTGGCTAACGGCGTATGACG+TGG + chr1_1:12023667-12023686 Msa0008350:intron 60.0%
GCTAACGGCGTATGACGTGG+TGG + chr1_1:12023670-12023689 Msa0008350:intron 60.0%
!! TGACGTGGTGGGTGCTGACT+TGG + chr1_1:12023682-12023701 Msa0008350:intron 60.0%
!! CGTTTGGTGCGTACGACCCA+AGG + chr1_1:12024696-12024715 Msa0008350:intron 60.0%
AGCTAACGACAGGTGCGTGG+CGG - chr1_1:12025843-12025862 None:intergenic 60.0%
GCTAGCTAACGACAGGTGCG+TGG - chr1_1:12025846-12025865 None:intergenic 60.0%
TGGCAGCCAGATCCCGTGAT+TGG - chr1_1:12028563-12028582 None:intergenic 60.0%
GAGGAGGAGATGCTAGGGCT+GGG - chr1_1:12028645-12028664 None:intergenic 60.0%
GGCAGTTGCGAAGACGGTTG+TGG - chr1_1:12028674-12028693 None:intergenic 60.0%
AGGCGTGGCAGTTGCGAAGA+CGG - chr1_1:12028680-12028699 None:intergenic 60.0%
TGGGTGGGAGGAAGATGGTG+AGG - chr1_1:12028700-12028719 None:intergenic 60.0%
!! GGTTCTGGGTGGGAGGAAGA+TGG - chr1_1:12028705-12028724 None:intergenic 60.0%
GAGGGGTTCCTTTGTCGGTG+TGG - chr1_1:12028785-12028804 None:intergenic 60.0%
! AAAACGGTACCGGGAGCCCA+TGG - chr1_1:12032076-12032095 None:intergenic 60.0%
CGCGACAACCGCAATCTGCA+TGG + chr1_1:12032533-12032552 Msa0008350:intron 60.0%
! TGGTGGTGATGATGTCGCGG+TGG + chr1_1:12032749-12032768 Msa0008350:intron 60.0%
! TGGTGATGATGTCGCGGTGG+TGG + chr1_1:12032752-12032771 Msa0008350:intron 60.0%
! TGATGATGTCGCGGTGGTGG+AGG + chr1_1:12032755-12032774 Msa0008350:intron 60.0%
! GTGGCCGCTAGTGATGACGA+TGG + chr1_1:12032804-12032823 Msa0008350:intron 60.0%
! GCCGCTAGTGATGACGATGG+TGG + chr1_1:12032807-12032826 Msa0008350:intron 60.0%
!! AGAAGGTTGGTGGGTGGTGG+TGG + chr1_1:12032919-12032938 Msa0008350:intron 60.0%
! AAAGCGATGACGGTCGTCGG+TGG + chr1_1:12033000-12033019 Msa0008350:intron 60.0%
! TCGGAGAGAGGAGTGGTGGA+TGG + chr1_1:12033023-12033042 Msa0008350:intron 60.0%
!! GAGGAGTGGTGGATGGTTGG+TGG + chr1_1:12033030-12033049 Msa0008350:intron 60.0%
!! AGTGGTGGATGGTTGGTGGG+TGG + chr1_1:12033034-12033053 Msa0008350:intron 60.0%
!! GTGGTGGATGGTTGGTGGGT+GGG + chr1_1:12033035-12033054 Msa0008350:intron 60.0%
GTGGGTGGGAGGTGAGAGAA+AGG + chr1_1:12033049-12033068 Msa0008350:intron 60.0%
TCGTCGGGTGTAAGCAAGGG+TGG + chr1_1:12039212-12039231 Msa0008350:CDS 60.0%
GCTAACGACAGGTGCGTGGC+GGG - chr1_1:12025842-12025861 None:intergenic 65.0%
GGAGGAGGAGATGCTAGGGC+TGG - chr1_1:12028646-12028665 None:intergenic 65.0%
GGGAGGAAGATGGTGAGGCG+TGG - chr1_1:12028695-12028714 None:intergenic 65.0%
GGTGGTAAGGAGGGGGATGG+CGG - chr1_1:12031964-12031983 None:intergenic 65.0%
! ACGATGGTGGTTGTGGGGGG+TGG + chr1_1:12032820-12032839 Msa0008350:intron 65.0%
! CGATGGTGGTTGTGGGGGGT+GGG + chr1_1:12032821-12032840 Msa0008350:intron 65.0%
! GATGGTGGTTGTGGGGGGTG+GGG + chr1_1:12032822-12032841 Msa0008350:intron 65.0%
! GTGGGGAGCTCAGATGGTGG+TGG + chr1_1:12032839-12032858 Msa0008350:intron 65.0%
!! TGGTGGCGGTGGGTGAGAGA+TGG + chr1_1:12032888-12032907 Msa0008350:intron 65.0%
!! AGGTTGGTGGGTGGTGGTGG+TGG + chr1_1:12032922-12032941 Msa0008350:intron 65.0%
!! TTGGTGGGTGGTGGTGGTGG+CGG + chr1_1:12032925-12032944 Msa0008350:intron 65.0%
! CGATGACGGTCGTCGGTGGT+CGG + chr1_1:12033004-12033023 Msa0008350:intron 65.0%
TCGGTGGTCGGAGAGAGGAG+TGG + chr1_1:12033016-12033035 Msa0008350:intron 65.0%
GTGGTCGGAGAGAGGAGTGG+TGG + chr1_1:12033019-12033038 Msa0008350:intron 65.0%
!! GTGGATGGTTGGTGGGTGGG+AGG + chr1_1:12033038-12033057 Msa0008350:intron 65.0%
!! GTGCGTGGCGGGTGCTGACT+AGG - chr1_1:12025831-12025850 None:intergenic 70.0%
TGGGGGGTGGGGAGCTCAGA+TGG + chr1_1:12032833-12032852 Msa0008350:intron 70.0%
GGGGTGGGGAGCTCAGATGG+TGG + chr1_1:12032836-12032855 Msa0008350:intron 70.0%
GGTCGTCGGTGGTCGGAGAG+AGG + chr1_1:12033011-12033030 Msa0008350:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 12022057 12040024 12022057 ID=Msa0008350;Name=Msa0008350
chr1_1 mRNA 12022057 12040024 12022057 ID=Msa0008350-mRNA-1;Parent=Msa0008350;Name=Msa0008350-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0|0|1|0.28|0.37|8|0|659
chr1_1 exon 12022057 12022246 12022057 ID=Msa0008350-mRNA-1:exon:4530;Parent=Msa0008350-mRNA-1
chr1_1 exon 12022277 12022509 12022277 ID=Msa0008350-mRNA-1:exon:4531;Parent=Msa0008350-mRNA-1
chr1_1 exon 12029694 12029802 12029694 ID=Msa0008350-mRNA-1:exon:4532;Parent=Msa0008350-mRNA-1
chr1_1 exon 12030487 12030562 12030487 ID=Msa0008350-mRNA-1:exon:4533;Parent=Msa0008350-mRNA-1
chr1_1 exon 12030776 12031023 12030776 ID=Msa0008350-mRNA-1:exon:4534;Parent=Msa0008350-mRNA-1
chr1_1 exon 12031138 12031310 12031138 ID=Msa0008350-mRNA-1:exon:4535;Parent=Msa0008350-mRNA-1
chr1_1 exon 12038449 12038557 12038449 ID=Msa0008350-mRNA-1:exon:4536;Parent=Msa0008350-mRNA-1
chr1_1 exon 12039183 12040024 12039183 ID=Msa0008350-mRNA-1:exon:4537;Parent=Msa0008350-mRNA-1
chr1_1 CDS 12022057 12022246 12022057 ID=Msa0008350-mRNA-1:cds;Parent=Msa0008350-mRNA-1
chr1_1 CDS 12022277 12022509 12022277 ID=Msa0008350-mRNA-1:cds;Parent=Msa0008350-mRNA-1
chr1_1 CDS 12029694 12029802 12029694 ID=Msa0008350-mRNA-1:cds;Parent=Msa0008350-mRNA-1
chr1_1 CDS 12030487 12030562 12030487 ID=Msa0008350-mRNA-1:cds;Parent=Msa0008350-mRNA-1
chr1_1 CDS 12030776 12031023 12030776 ID=Msa0008350-mRNA-1:cds;Parent=Msa0008350-mRNA-1
chr1_1 CDS 12031138 12031310 12031138 ID=Msa0008350-mRNA-1:cds;Parent=Msa0008350-mRNA-1
chr1_1 CDS 12038449 12038557 12038449 ID=Msa0008350-mRNA-1:cds;Parent=Msa0008350-mRNA-1
chr1_1 CDS 12039183 12040024 12039183 ID=Msa0008350-mRNA-1:cds;Parent=Msa0008350-mRNA-1
Gene Sequence

>Msa0008350

ATGTTCTCCATCAAAGAAGGAACAGAAGAATCTGAAATTGTGAAGAACACAATAAGTGAGTGTGAAGAAAATGGCATCAAAGGAGAGGAAAAGCTTTGTGTGACATCATTGGAATCTATGGTTGATTTCACTACTTCGAAACTTGGAAACAATGTTGAAGCTGTCTCAACAGAAGTGAAAAAAGAAAGCAGTGTGAAGAAATTGGGAGAGAAGAATAAAGCTGTAGTGTGTCACAAAGAGAATTACCCTTATGCAGTTTTTTACTGTCATAAAACAGATTCAATTAAAGTTTACTCTGTGCCTTTGGAAGGTGTTGATGGAAGTAGAGTTAAAGCTGTTGCTGTGTGTCACACTGATACTTCACAATGGAATCCTAAACATTTGGCTTTTCAAGTGCTCAAAGTTCAACCTGGGACTGTTCCACTTGTGCTAGTGGGAACAAATGCTGCAATATTTCCACCTCAATATTACTGGAAGTCCATTCTTCCCAACTCTCCAATGCCAAACGCCATTACTGATCTTCTACACCCTGCTGGATATTGGAGTAAAGAGAAAGCAACAATGATGGATGTAAGCAAGGGTGGTGTAGATGTTGGAGTCAGAAAAGGAGAAGTTGCTAATTCCATACCGTTTTCATCAAACAAATTGGAAAACATACTCAACAAGTTTTCCATCAAAGAAGGATCAAAGGAAGCTGAAATTGTGAAGAGAACAATAAGTGAGTGTGAAGCAAATGGCATCAAAGGTGAGGAAAAGCTTTGTGTAACATCATTGGAATCTATGGTTGATTTCACTATTTCGAAACTCGGAAACAATGTTGAAGCTGTTTCAACAGAAGTGGATAAAAATAGTAATGATTCAACTGAAGTTTACTCTGTGCCCTTGGAATGTGTTGATGGAAACATGTTTAAAACTATTGCTGTTTGTCACACGGATACATCAGAATGGAATCCTAAATATTATGCTTTTCATGAGCTTAAAGTTCAACCTGGGACTGTTCCTATTTGTCACATCCTCCCACAGGATCATGTTATGCAAGTGGGAACTAATGCTGCAATATTACCACCTCAACTTTACTGGAAGTCCATGCTTCCCAACTCTCCAATGCCAAAAGCCATCACTAATCTGCTACACCCTGCTGGATATTGGAGTAAAGAGAAAGCAACATCGTCGGGTGTAAGCAAGGGTGGTGTATATGCTAGACTCAGAAAAGGGTATGAAGGAGGTGGCACTTATCTGAATGATGAAAAATTTATTCCATTGATTTTCTTTTATTTTCCACTCAATGAGAGTCAAATTCAACTACATGATAAACAAAATGTAACACTTTTCTTCTTGAAAAAAGATTTACATCATGGAACAAAATTGAACTTGCAATTCAGAGAGACAATTTCAAATAATAATGGAACAAAATTCTTGCCTAGAGAAGTTGCTAATTCCATACCGTTTTCATCAAACAAATTGGGAAACATACTCAACAAGTTTTTCATCAAGGAAGGATCAAAGGAAGCTGAAATTGTGAAGAGAACAATAAGTGCGTGTGAAGCAAATGGCATCAAAGGTGAGGAAAAGCTTTGTGTAACATCATTGGAATCTATGGTTGATTTCACTATTTCGAAACTCGGAAACAATGTTGAAGCTATTTCCACAGAAGTGAATAAAGAAAACAGTGGTTTGCAACAATATGTAATAGCGAAAGGAGTGAAGAAATTGGGAGAGAAGAATAAAGTTGTAGTGTGTCACAAAGAGAATTACCCTTATGCAGTTTTTTACTGTCATAAAACTGATTCAACTGAAGTTTACTCTGTGCCTTTAGAAGGTGTTGATGGAAACATGGTTAAAACTATTGTTGTTTGTCACACTGATACATCAGAATGGAATCCTAAACATTTGGCTTTTCATGTGCTTAAAGTTCAACCTGGGACTGTTCCTGTTTGTCACATCCTCCCACAGGATCATGTTGTTTGGGTTTCCAAGTGA
Protein sequence

>Msa0008350

MFSIKEGTEESEIVKNTISECEENGIKGEEKLCVTSLESMVDFTTSKLGNNVEAVSTEVKKESSVKKLGEKNKAVVCHKENYPYAVFYCHKTDSIKVYSVPLEGVDGSRVKAVAVCHTDTSQWNPKHLAFQVLKVQPGTVPLVLVGTNAAIFPPQYYWKSILPNSPMPNAITDLLHPAGYWSKEKATMMDVSKGGVDVGVRKGEVANSIPFSSNKLENILNKFSIKEGSKEAEIVKRTISECEANGIKGEEKLCVTSLESMVDFTISKLGNNVEAVSTEVDKNSNDSTEVYSVPLECVDGNMFKTIAVCHTDTSEWNPKYYAFHELKVQPGTVPICHILPQDHVMQVGTNAAILPPQLYWKSMLPNSPMPKAITNLLHPAGYWSKEKATSSGVSKGGVYARLRKGYEGGGTYLNDEKFIPLIFFYFPLNESQIQLHDKQNVTLFFLKKDLHHGTKLNLQFRETISNNNGTKFLPREVANSIPFSSNKLGNILNKFFIKEGSKEAEIVKRTISACEANGIKGEEKLCVTSLESMVDFTISKLGNNVEAISTEVNKENSGLQQYVIAKGVKKLGEKNKVVVCHKENYPYAVFYCHKTDSTEVYSVPLEGVDGNMVKTIVVCHTDTSEWNPKHLAFHVLKVQPGTVPVCHILPQDHVVWVSK*