AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0427050


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0427050 MtrunA17_Chr3g0129301 99.338 302 2 0 5 306 399 700 0.0 617
Msa0427050 MtrunA17_Chr3g0129301 29.000 300 160 6 32 278 99 398 1.14e-24 103
Msa0427050 MtrunA17_Chr3g0119921 32.273 220 146 3 25 242 488 706 4.24e-30 120
Msa0427050 MtrunA17_Chr3g0119921 26.786 168 101 3 122 289 306 451 3.94e-13 69.7
Msa0427050 MtrunA17_Chr2g0327291 31.858 226 152 2 14 238 350 574 4.81e-29 116
Msa0427050 MtrunA17_Chr2g0327291 26.016 246 151 3 39 256 64 306 9.13e-21 92.4
Msa0427050 MtrunA17_Chr4g0028471 32.743 226 150 2 14 238 350 574 1.11e-28 115
Msa0427050 MtrunA17_Chr4g0028471 26.316 247 149 4 39 256 64 306 5.50e-21 93.2
Msa0427050 MtrunA17_Chr8g0371361 30.303 264 164 7 12 262 457 713 9.49e-28 113
Msa0427050 MtrunA17_Chr8g0371361 26.923 286 167 7 39 285 154 436 4.19e-24 102
Msa0427050 MtrunA17_Chr7g0220881 29.924 264 165 7 12 262 459 715 2.57e-27 112
Msa0427050 MtrunA17_Chr7g0220881 26.573 286 168 6 39 285 154 436 2.88e-24 102
Msa0427050 MtrunA17_Chr1g0181461 30.303 264 164 6 12 262 305 561 5.36e-27 110
Msa0427050 MtrunA17_Chr1g0181461 28.966 290 162 9 51 298 12 299 9.21e-24 101
Msa0427050 MtrunA17_Chr3g0130211 31.383 188 87 6 28 189 21 192 8.79e-17 78.6
Msa0427050 MtrunA17_Chr1g0180601 27.236 246 152 8 36 256 1052 1295 1.52e-15 77.4
Msa0427050 MtrunA17_Chr8g0344651 26.383 235 149 7 33 245 592 824 1.97e-15 77.0
Msa0427050 MtrunA17_Chr4g0041871 27.632 228 139 7 36 240 1003 1227 4.89e-15 75.9
Msa0427050 MtrunA17_Chr4g0041871 25.221 226 128 7 50 246 357 570 5.24e-11 63.5
Msa0427050 MtrunA17_Chr7g0264631 26.721 247 152 9 36 256 1078 1321 7.29e-15 75.1
Msa0427050 MtrunA17_Chr1g0178481 29.231 195 111 7 43 212 384 576 4.13e-13 69.7
Msa0427050 MtrunA17_Chr5g0410921 30.811 185 103 7 50 212 370 551 1.29e-12 68.6
Msa0427050 MtrunA17_Chr5g0410921 24.280 243 145 7 11 232 979 1203 1.44e-11 65.5
Msa0427050 MtrunA17_Chr1g0156821 30.220 182 108 5 50 212 1008 1189 1.86e-12 68.2
Msa0427050 MtrunA17_Chr3g0093091 25.094 267 169 8 58 294 642 907 2.45e-12 67.4
Msa0427050 MtrunA17_Chr7g0249091 27.826 230 128 6 38 230 85 313 2.95e-12 66.6
Msa0427050 MtrunA17_Chr2g0285311 23.723 274 174 7 39 279 369 640 3.73e-12 67.0
Msa0427050 MtrunA17_Chr3g0123411 28.079 203 124 6 50 232 919 1119 9.70e-12 65.9
Msa0427050 MtrunA17_Chr1g0211721 30.178 169 103 5 67 225 377 540 1.09e-11 65.5
Msa0427050 MtrunA17_Chr6g0453051 27.604 192 116 6 50 220 377 566 3.45e-11 64.3
Msa0427050 MtrunA17_Chr6g0453051 26.577 222 138 8 34 232 1003 1222 5.44e-11 63.5
Msa0427050 MtrunA17_Chr3g0128381 29.697 165 99 4 53 200 407 571 4.19e-11 63.5
Msa0427050 MtrunA17_Chr8g0393151 27.928 222 122 7 39 232 19 230 4.63e-11 62.0
Msa0427050 MtrunA17_Chr1g0156551 28.994 169 105 4 67 225 454 617 8.42e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0427050 AT5G64840.1 88.742 302 34 0 5 306 391 692 0.0 537
Msa0427050 AT5G64840.1 27.184 309 170 6 32 287 90 396 5.30e-22 96.7
Msa0427050 AT5G09930.1 84.437 302 47 0 5 306 377 678 3.94e-174 498
Msa0427050 AT5G09930.1 26.471 306 175 5 32 287 77 382 1.81e-23 100
Msa0427050 AT1G64550.1 31.739 230 154 3 15 242 479 707 1.62e-30 121
Msa0427050 AT1G64550.1 23.026 304 169 6 32 289 168 452 1.70e-15 77.4
Msa0427050 AT5G60790.1 30.973 226 154 2 14 238 355 579 1.66e-27 112
Msa0427050 AT5G60790.1 26.016 246 151 4 39 256 69 311 2.92e-19 88.6
Msa0427050 AT3G54540.2 31.604 212 133 4 44 244 501 711 1.25e-26 110
Msa0427050 AT3G54540.2 26.421 299 180 5 39 298 163 460 4.03e-26 108
Msa0427050 AT3G54540.1 31.604 212 133 4 44 244 501 711 1.25e-26 110
Msa0427050 AT3G54540.1 26.421 299 180 5 39 298 163 460 4.03e-26 108
Msa0427050 AT1G27940.2 26.961 204 123 6 53 234 174 373 8.04e-14 72.4
Msa0427050 AT1G27940.2 27.320 194 117 6 42 212 793 985 3.65e-13 70.5
Msa0427050 AT1G28010.1 26.961 204 123 6 53 234 389 588 8.08e-14 72.4
Msa0427050 AT1G28010.1 26.804 194 118 6 42 212 1009 1201 5.78e-12 67.0
Msa0427050 AT4G33460.1 31.313 198 101 8 39 212 40 226 1.54e-13 69.7
Msa0427050 AT1G27940.1 26.961 204 123 6 53 234 388 587 1.68e-13 71.6
Msa0427050 AT1G27940.1 27.320 194 117 6 42 212 1007 1199 7.97e-13 69.7
Msa0427050 AT4G25960.1 27.391 230 143 7 50 259 415 640 1.82e-13 71.6
Msa0427050 AT5G52860.1 25.547 274 177 6 58 305 49 321 4.04e-13 70.1
Msa0427050 AT3G28390.1 25.974 231 147 9 53 263 364 590 1.20e-12 68.9
Msa0427050 AT3G28345.1 22.968 283 190 10 36 294 356 634 2.94e-12 67.8
Msa0427050 AT3G28415.1 25.893 224 142 9 53 256 355 574 3.24e-12 67.8
Msa0427050 AT3G28415.2 26.786 224 140 10 53 256 363 582 3.56e-12 67.4
Msa0427050 AT1G10680.1 27.322 183 112 5 50 212 375 556 4.23e-12 67.4
Msa0427050 AT1G10680.1 24.314 255 153 9 11 244 972 1207 5.25e-11 63.9
Msa0427050 AT5G46540.1 23.140 242 146 6 14 234 1000 1222 4.44e-12 67.4
Msa0427050 AT1G10680.2 27.322 183 112 5 50 212 375 556 5.27e-12 67.0
Msa0427050 AT3G28860.1 25.909 220 138 7 36 232 1007 1224 2.69e-11 64.7
Msa0427050 AT3G28860.1 29.268 205 119 9 50 232 379 579 3.32e-11 64.7
Msa0427050 AT1G63270.1 27.222 180 107 6 51 212 23 196 8.84e-11 61.2
Msa0427050 AT3G28380.1 22.263 274 185 9 50 303 373 638 9.66e-11 63.2

Find 82 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAATTTGCAGTATTATT+TGG 0.118260 3_2:+77733014 Msa0427050:intron
TTGGATTTGGCTTTCAATTT+AGG 0.142201 3_2:-77733099 None:intergenic
TACTTTACTAAAATTGATTA+TGG 0.188943 3_2:+77730267 Msa0427050:CDS
ACCATCAACTCTACTTGTTT+TGG 0.234739 3_2:+77731522 Msa0427050:CDS
CAGAAATTGGAAAGACTTCT+TGG 0.282365 3_2:+77729963 Msa0427050:intron
GACGATATTAAAGGACTTCT+TGG 0.283294 3_2:+77730537 Msa0427050:CDS
TACCTTTGACATCTTGGATT+TGG 0.289284 3_2:-77733112 None:intergenic
GAAGTTTACCTTTGACATCT+TGG 0.293270 3_2:-77733118 None:intergenic
TCCAAAACAAGTAGAGTTGA+TGG 0.315178 3_2:-77731523 None:intergenic
ACAGTTAGGAACTTGGATTT+TGG 0.319199 3_2:+77730071 Msa0427050:CDS
ACCTCAAGCATTTCTTTAGA+AGG 0.324032 3_2:-77731571 None:intergenic
ATTATAGCATTTGTGATTCC+TGG 0.339255 3_2:+77733495 Msa0427050:three_prime_UTR
AACGGAAACAAATGAAAATC+AGG 0.359605 3_2:+77730012 Msa0427050:CDS
ACTTTACTAAAATTGATTAT+GGG 0.374049 3_2:+77730268 Msa0427050:CDS
ACAGGCTGAGGCACTTGATC+TGG 0.376554 3_2:+77730464 Msa0427050:intron
TAACTATTTCGAGCAGAATC+AGG 0.379580 3_2:+77730345 Msa0427050:CDS
TTCATTTGTTTCCGTTCAAA+TGG 0.384165 3_2:-77730005 None:intergenic
ATTGCCATTCTTGGTCCAAA+TGG 0.399808 3_2:+77730232 Msa0427050:CDS
AAAATTGTTCTCTTCATGTA+TGG 0.407853 3_2:-77733343 None:intergenic
GTACTCTTGCCACATCCATT+TGG 0.408591 3_2:-77730247 None:intergenic
TGGAGGAGTGACGATATTAA+AGG 0.411374 3_2:+77730528 Msa0427050:CDS
TTAGATTTATTCACCAAATG+AGG 0.419755 3_2:+77733364 Msa0427050:three_prime_UTR
TAGAGGAAGCTGCCGAGGAC+TGG 0.429062 3_2:+77730508 Msa0427050:CDS
GGCAAATCTTACAATTGAAA+GGG 0.431561 3_2:+77730201 Msa0427050:CDS
AGGATAACTTCACCGCTGAT+TGG 0.444666 3_2:-77730301 None:intergenic
TGATTCTGCTCGAAATAGTT+AGG 0.448814 3_2:-77730343 None:intergenic
TCTCTTCATGTATGGTGTAA+TGG 0.464376 3_2:-77733335 None:intergenic
TCAGCGGTGAAGTTATCCTT+GGG 0.465273 3_2:+77730305 Msa0427050:CDS
TGGAGAAGAATCTTGATGCC+AGG 0.465875 3_2:+77733034 Msa0427050:CDS
TGTTGTAACAGTTAGGAACT+TGG 0.467480 3_2:+77730064 Msa0427050:CDS
ATCAGCGGTGAAGTTATCCT+TGG 0.477715 3_2:+77730304 Msa0427050:CDS
CTTTGTCGTCAAGCTCAGCC+TGG 0.480481 3_2:-77733074 None:intergenic
ACATCCATTTGGACCAAGAA+TGG 0.482881 3_2:-77730236 None:intergenic
ACGATATTAAAGGACTTCTT+GGG 0.489351 3_2:+77730538 Msa0427050:CDS
AGTTAAAGATGGCACTGTGC+AGG 0.495959 3_2:+77731817 Msa0427050:CDS
AGGCAAATCTTACAATTGAA+AGG 0.498825 3_2:+77730200 Msa0427050:CDS
GAAGATCTGTTGTAACAGTT+AGG 0.500389 3_2:+77730057 Msa0427050:CDS
TTGTATATATCATGTCTCAA+TGG 0.506183 3_2:+77733429 Msa0427050:three_prime_UTR
GGATGAACCAACGAATCACT+TGG 0.511588 3_2:+77731543 Msa0427050:CDS
GGTATATCCAAGTGATTCGT+TGG 0.512337 3_2:-77731550 None:intergenic
CTTCCACTGCTTCCACGCAC+AGG 0.512959 3_2:-77730038 None:intergenic
GTGCAAAGAATTCAAAGAGA+TGG 0.519064 3_2:+77733296 Msa0427050:CDS
GGCACTGTGCAGGATTATGC+TGG 0.519823 3_2:+77731827 Msa0427050:CDS
ATCGTCACTCCTCCAGTCCT+CGG 0.521542 3_2:-77730520 None:intergenic
TAGATTTATTCACCAAATGA+GGG 0.529000 3_2:+77733365 Msa0427050:three_prime_UTR
CAAGCAAAACAGAAGTCTAA+AGG 0.530649 3_2:+77733274 Msa0427050:CDS
TTCCCTGTGCGTGGAAGCAG+TGG 0.531912 3_2:+77730035 Msa0427050:CDS
TGAGACATGATATATACAAA+AGG 0.541276 3_2:-77733425 None:intergenic
ATCATGAGATACGGTGATAA+CGG 0.548364 3_2:-77731756 None:intergenic
GACAGTAGAGGAAGCTGCCG+AGG 0.548939 3_2:+77730503 Msa0427050:CDS
TCTATTGAGTGGTGGTGAGA+AGG 0.550123 3_2:+77730602 Msa0427050:CDS
AGGAAGCTGCCGAGGACTGG+AGG 0.551231 3_2:+77730511 Msa0427050:CDS
AAGGAAGAAGCAAAAGATGC+AGG 0.553204 3_2:+77733243 Msa0427050:CDS
AGAGTGATTGAAGTTAAAGA+TGG 0.555267 3_2:+77731806 Msa0427050:CDS
GGAGAAGAATCTTGATGCCA+GGG 0.558623 3_2:+77733035 Msa0427050:CDS
TTACAGTCTCAACAACAACT+TGG 0.561617 3_2:+77733524 Msa0427050:three_prime_UTR
TCATGTATGGTGTAATGGAA+TGG 0.574779 3_2:-77733330 None:intergenic
AAAATCAGGTTCCCTGTGCG+TGG 0.579340 3_2:+77730026 Msa0427050:CDS
TTGAGACTGTAAACTTCACC+AGG 0.588650 3_2:-77733513 None:intergenic
TTCCACTGCTTCCACGCACA+GGG 0.589830 3_2:-77730037 None:intergenic
CGTAAAGTTTCTCTATTGAG+TGG 0.590268 3_2:+77730591 Msa0427050:CDS
GGCACTTGATCTGGAAAAGA+CGG 0.593050 3_2:+77730473 Msa0427050:CDS
GATTTATTCACCAAATGAGG+GGG 0.599202 3_2:+77733367 Msa0427050:three_prime_UTR
AAAGTACCGATCATGAGATA+CGG 0.606013 3_2:-77731765 None:intergenic
AGCCAAATCCAAGATGTCAA+AGG 0.614850 3_2:+77733110 Msa0427050:CDS
GCAAATCTTACAATTGAAAG+GGG 0.619588 3_2:+77730202 Msa0427050:CDS
AGATTTATTCACCAAATGAG+GGG 0.619882 3_2:+77733366 Msa0427050:three_prime_UTR
AAAGTTTCTCTATTGAGTGG+TGG 0.627890 3_2:+77730594 Msa0427050:CDS
ATCAGGCTGAGAAAGAAGCA+AGG 0.628611 3_2:+77733224 Msa0427050:intron
ATTCTTGGTCCAAATGGATG+TGG 0.633025 3_2:+77730238 Msa0427050:CDS
ATTGGAAAGACTTCTTGGAG+AGG 0.634177 3_2:+77729968 Msa0427050:CDS
GCAATACATTATGCTCCCCA+AGG 0.635416 3_2:-77730321 None:intergenic
TAGTAGAGAAGCCATTTGAA+CGG 0.638546 3_2:+77729994 Msa0427050:CDS
GACGGTGCTTGAGACAGTAG+AGG 0.647160 3_2:+77730491 Msa0427050:CDS
TTATCACCGTATCTCATGAT+CGG 0.661904 3_2:+77731759 Msa0427050:CDS
ACCTTCTAAAGAAATGCTTG+AGG 0.662881 3_2:+77731570 Msa0427050:CDS
GGAGGCAATAAATGAGTACG+AGG 0.667247 3_2:+77731730 Msa0427050:intron
CAGCGGTGAAGTTATCCTTG+GGG 0.685607 3_2:+77730306 Msa0427050:CDS
GGTTTAGAGAAGCCAATCAG+CGG 0.693977 3_2:+77730289 Msa0427050:CDS
AAACACATTAGCATCCGCTG+TGG 0.734759 3_2:+77733598 Msa0427050:three_prime_UTR
GAGGCAATAAATGAGTACGA+GGG 0.751118 3_2:+77731731 Msa0427050:CDS
AAATAGCATTAAGACCACAG+CGG 0.779665 3_2:-77733612 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAACATTAATTTTTACAATA+CGG - chr3_2:77729886-77729905 None:intergenic 10.0%
!! TCAAAAAAAAAGAAAATATT+AGG - chr3_2:77731655-77731674 None:intergenic 10.0%
!! AATTATAAATCAATATTAGT+CGG - chr3_2:77731701-77731720 None:intergenic 10.0%
!!! TTCTTTTAAGTAAATAACAT+AGG - chr3_2:77729921-77729940 None:intergenic 15.0%
!! TACTTTACTAAAATTGATTA+TGG + chr3_2:77730267-77730286 Msa0427050:CDS 15.0%
!! ACTTTACTAAAATTGATTAT+GGG + chr3_2:77730268-77730287 Msa0427050:CDS 15.0%
!!! AAAGTTTTGAAATAAAGAAT+TGG - chr3_2:77730414-77730433 None:intergenic 15.0%
!!! TTCTTAAATTTCTTTAAAGA+CGG - chr3_2:77730911-77730930 None:intergenic 15.0%
!! TTTAAAGAAATTTAAGAAAC+AGG + chr3_2:77730913-77730932 Msa0427050:intron 15.0%
!!! TAAATGTATTTGACAATTTT+GGG + chr3_2:77731019-77731038 Msa0427050:intron 15.0%
!! ATGATTTATTCCTAATAAAA+AGG + chr3_2:77731132-77731151 Msa0427050:intron 15.0%
!! TGATTTATTCCTAATAAAAA+GGG + chr3_2:77731133-77731152 Msa0427050:intron 15.0%
!! AGTATATTTAAACAATCTAT+GGG - chr3_2:77731908-77731927 None:intergenic 15.0%
!! AAGTATATTTAAACAATCTA+TGG - chr3_2:77731909-77731928 None:intergenic 15.0%
!! ATATTCATTATATACAAAAC+TGG - chr3_2:77732928-77732947 None:intergenic 15.0%
!!! ATTGATTTATTTGAAAAATC+AGG + chr3_2:77733207-77733226 Msa0427050:intron 15.0%
!!! ATTAATTTTTACAATACGGA+AGG - chr3_2:77729882-77729901 None:intergenic 20.0%
!!! AAAGATTTTCAAAATGTCTA+AGG - chr3_2:77730833-77730852 None:intergenic 20.0%
!!! GTAAATGTATTTGACAATTT+TGG + chr3_2:77731018-77731037 Msa0427050:intron 20.0%
!! TGAACATTAAATACAGATAA+AGG - chr3_2:77731618-77731637 None:intergenic 20.0%
!! AAATTAAAACAGAATACATC+AGG - chr3_2:77732274-77732293 None:intergenic 20.0%
!!! TGATGTATTCTGTTTTAATT+TGG + chr3_2:77732273-77732292 Msa0427050:intron 20.0%
!!! CCATATTTTACTTTTTGAAA+GGG - chr3_2:77732387-77732406 None:intergenic 20.0%
!!! TCCATATTTTACTTTTTGAA+AGG - chr3_2:77732388-77732407 None:intergenic 20.0%
!! TAAATTATACCCTCAAAATT+AGG - chr3_2:77732809-77732828 None:intergenic 20.0%
!! TTGAATCATTCAATGAAAAA+TGG - chr3_2:77732868-77732887 None:intergenic 20.0%
!! CATGTTTGTTTATTGTTATA+GGG + chr3_2:77732971-77732990 Msa0427050:intron 20.0%
!! TGAAAATTTGCAGTATTATT+TGG + chr3_2:77733014-77733033 Msa0427050:intron 20.0%
!!! AGCTTATTTCTATGATTGAA+TGG + chr3_2:77730709-77730728 Msa0427050:intron 25.0%
! TTAAGAAACAGGAACTAAAA+TGG + chr3_2:77730924-77730943 Msa0427050:intron 25.0%
! TATATGCATTTAGTGAGAAA+GGG - chr3_2:77731427-77731446 None:intergenic 25.0%
! TTATATGCATTTAGTGAGAA+AGG - chr3_2:77731428-77731447 None:intergenic 25.0%
! CATATAATGCAACACTATTA+GGG + chr3_2:77731441-77731460 Msa0427050:intron 25.0%
! ATATAATGCAACACTATTAG+GGG + chr3_2:77731442-77731461 Msa0427050:intron 25.0%
!! ATATTGTTCCATGTTTTACT+AGG + chr3_2:77731468-77731487 Msa0427050:intron 25.0%
! GGTAAGAAAAAAAAATGAGA+CGG - chr3_2:77731597-77731616 None:intergenic 25.0%
! AAAGAAAATATTAGGCTGAT+GGG - chr3_2:77731647-77731666 None:intergenic 25.0%
! AAAAGAAAATATTAGGCTGA+TGG - chr3_2:77731648-77731667 None:intergenic 25.0%
! TGATTTATAATTCTTCTACC+AGG + chr3_2:77731709-77731728 Msa0427050:intron 25.0%
! CATGTAATACTAATGATCAA+TGG - chr3_2:77732004-77732023 None:intergenic 25.0%
!!! GTATTACATGTGTTTTTTGT+TGG + chr3_2:77732014-77732033 Msa0427050:intron 25.0%
! TTAAGAAAATTGAGGAATGA+GGG - chr3_2:77732106-77732125 None:intergenic 25.0%
! AATAAAGTGAAGAAATCTGA+GGG - chr3_2:77732227-77732246 None:intergenic 25.0%
! AAATAAAGTGAAGAAATCTG+AGG - chr3_2:77732228-77732247 None:intergenic 25.0%
! TCAGATTTCTTCACTTTATT+TGG + chr3_2:77732227-77732246 Msa0427050:intron 25.0%
!! CAGATTTCTTCACTTTATTT+GGG + chr3_2:77732228-77732247 Msa0427050:intron 25.0%
! ATGTAAAATTCCTATCACAA+AGG - chr3_2:77732301-77732320 None:intergenic 25.0%
!!! TTTTTTTTCAACAGCATATC+TGG + chr3_2:77732336-77732355 Msa0427050:intron 25.0%
! CCCTTTCAAAAAGTAAAATA+TGG + chr3_2:77732384-77732403 Msa0427050:intron 25.0%
! AAATAACTTAGACGATCAAA+AGG + chr3_2:77732549-77732568 Msa0427050:intron 25.0%
! TGAATGATTCAATAGACATA+TGG + chr3_2:77732876-77732895 Msa0427050:intron 25.0%
! AACAATAAACAAACATGCAT+TGG - chr3_2:77732968-77732987 None:intergenic 25.0%
! GCATGTTTGTTTATTGTTAT+AGG + chr3_2:77732970-77732989 Msa0427050:intron 25.0%
! AAAATTGTTCTCTTCATGTA+TGG - chr3_2:77733346-77733365 None:intergenic 25.0%
! TTAGATTTATTCACCAAATG+AGG + chr3_2:77733364-77733383 Msa0427050:three_prime_UTR 25.0%
! TAGATTTATTCACCAAATGA+GGG + chr3_2:77733365-77733384 Msa0427050:three_prime_UTR 25.0%
! TGAGACATGATATATACAAA+AGG - chr3_2:77733428-77733447 None:intergenic 25.0%
! TTGTATATATCATGTCTCAA+TGG + chr3_2:77733429-77733448 Msa0427050:three_prime_UTR 25.0%
TCTGTTGTCACATATACATA+AGG - chr3_2:77729947-77729966 None:intergenic 30.0%
GTATATGTGACAACAGAAAT+TGG + chr3_2:77729950-77729969 Msa0427050:intron 30.0%
TTCATTTGTTTCCGTTCAAA+TGG - chr3_2:77730008-77730027 None:intergenic 30.0%
AACGGAAACAAATGAAAATC+AGG + chr3_2:77730012-77730031 Msa0427050:CDS 30.0%
AGGCAAATCTTACAATTGAA+AGG + chr3_2:77730200-77730219 Msa0427050:CDS 30.0%
GGCAAATCTTACAATTGAAA+GGG + chr3_2:77730201-77730220 Msa0427050:CDS 30.0%
GCAAATCTTACAATTGAAAG+GGG + chr3_2:77730202-77730221 Msa0427050:CDS 30.0%
TTGACTGAGAAAATGCTATT+TGG + chr3_2:77730377-77730396 Msa0427050:intron 30.0%
AAATAAAGAATTGGAACCGA+TGG - chr3_2:77730405-77730424 None:intergenic 30.0%
ACGATATTAAAGGACTTCTT+GGG + chr3_2:77730538-77730557 Msa0427050:CDS 30.0%
! AGCAATATCATCTAATTTGC+GGG - chr3_2:77730802-77730821 None:intergenic 30.0%
CAGCAATATCATCTAATTTG+CGG - chr3_2:77730803-77730822 None:intergenic 30.0%
AACAAACAACCACATTTCAA+AGG - chr3_2:77730864-77730883 None:intergenic 30.0%
!! GATTCTTCTTCAACTTGTTT+TGG + chr3_2:77730996-77731015 Msa0427050:intron 30.0%
TCCTAATAAAAAGGGAAATG+TGG + chr3_2:77731141-77731160 Msa0427050:intron 30.0%
! ACCACATTTCCCTTTTTATT+AGG - chr3_2:77731145-77731164 None:intergenic 30.0%
AAACTATTTACATGCTTCCA+TGG + chr3_2:77731352-77731371 Msa0427050:intron 30.0%
GCATATAATGCAACACTATT+AGG + chr3_2:77731440-77731459 Msa0427050:intron 30.0%
TTTATAATTCTTCTACCAGG+AGG + chr3_2:77731712-77731731 Msa0427050:intron 30.0%
AGAGTGATTGAAGTTAAAGA+TGG + chr3_2:77731806-77731825 Msa0427050:CDS 30.0%
!!! TGTGTTTTTTGTTGGATTCT+TGG + chr3_2:77732022-77732041 Msa0427050:intron 30.0%
AATCATCATTTGCATCTAGA+TGG - chr3_2:77732068-77732087 None:intergenic 30.0%
! CTAGATGCAAATGATGATTT+TGG + chr3_2:77732069-77732088 Msa0427050:intron 30.0%
GTTAAGAAAATTGAGGAATG+AGG - chr3_2:77732107-77732126 None:intergenic 30.0%
AAAACAGAATACATCAGGTA+GGG - chr3_2:77732269-77732288 None:intergenic 30.0%
TAAAACAGAATACATCAGGT+AGG - chr3_2:77732270-77732289 None:intergenic 30.0%
! TAATTTGGTTCCTTTGTGAT+AGG + chr3_2:77732288-77732307 Msa0427050:intron 30.0%
TCAGTCTTTCATTTCATAAG+TGG + chr3_2:77732453-77732472 Msa0427050:intron 30.0%
TCTTTCATTTCATAAGTGGA+AGG + chr3_2:77732457-77732476 Msa0427050:intron 30.0%
TTTCATAAGTGGAAGGATAT+AGG + chr3_2:77732464-77732483 Msa0427050:intron 30.0%
CATTCAATGAAAAATGGCTT+CGG - chr3_2:77732862-77732881 None:intergenic 30.0%
!! TTGGATTTGGCTTTCAATTT+AGG - chr3_2:77733102-77733121 None:intergenic 30.0%
AAACTTCTGTGAAACTCATA+TGG + chr3_2:77733134-77733153 Msa0427050:intron 30.0%
AGATTTATTCACCAAATGAG+GGG + chr3_2:77733366-77733385 Msa0427050:three_prime_UTR 30.0%
ATTATAGCATTTGTGATTCC+TGG + chr3_2:77733495-77733514 Msa0427050:three_prime_UTR 30.0%
CAGAAATTGGAAAGACTTCT+TGG + chr3_2:77729963-77729982 Msa0427050:intron 35.0%
TAGTAGAGAAGCCATTTGAA+CGG + chr3_2:77729994-77730013 Msa0427050:CDS 35.0%
GAAGATCTGTTGTAACAGTT+AGG + chr3_2:77730057-77730076 Msa0427050:CDS 35.0%
TGTTGTAACAGTTAGGAACT+TGG + chr3_2:77730064-77730083 Msa0427050:CDS 35.0%
! ACAGTTAGGAACTTGGATTT+TGG + chr3_2:77730071-77730090 Msa0427050:CDS 35.0%
! TTGCCTTGTTGAAAAGTTTC+TGG - chr3_2:77730186-77730205 None:intergenic 35.0%
GGAGAAAAAATTGCCATTCT+TGG + chr3_2:77730223-77730242 Msa0427050:CDS 35.0%
TGATTCTGCTCGAAATAGTT+AGG - chr3_2:77730346-77730365 None:intergenic 35.0%
TAACTATTTCGAGCAGAATC+AGG + chr3_2:77730345-77730364 Msa0427050:CDS 35.0%
!! AAAATGCTATTTGGTGCCAT+CGG + chr3_2:77730386-77730405 Msa0427050:intron 35.0%
GACGATATTAAAGGACTTCT+TGG + chr3_2:77730537-77730556 Msa0427050:CDS 35.0%
CGTAAAGTTTCTCTATTGAG+TGG + chr3_2:77730591-77730610 Msa0427050:CDS 35.0%
AAAGTTTCTCTATTGAGTGG+TGG + chr3_2:77730594-77730613 Msa0427050:CDS 35.0%
!!! TTTTGCTCTCCTTTGAAATG+TGG + chr3_2:77730852-77730871 Msa0427050:intron 35.0%
! ATGGCTATGATGATGTTAAG+AGG + chr3_2:77730943-77730962 Msa0427050:intron 35.0%
! ACCATCAACTCTACTTGTTT+TGG + chr3_2:77731522-77731541 Msa0427050:CDS 35.0%
TCCAAAACAAGTAGAGTTGA+TGG - chr3_2:77731526-77731545 None:intergenic 35.0%
! ACCTTCTAAAGAAATGCTTG+AGG + chr3_2:77731570-77731589 Msa0427050:CDS 35.0%
ACCTCAAGCATTTCTTTAGA+AGG - chr3_2:77731574-77731593 None:intergenic 35.0%
AATCAATATTAGTCGGTCCT+TGG - chr3_2:77731694-77731713 None:intergenic 35.0%
ATCATGAGATACGGTGATAA+CGG - chr3_2:77731759-77731778 None:intergenic 35.0%
TTATCACCGTATCTCATGAT+CGG + chr3_2:77731759-77731778 Msa0427050:CDS 35.0%
!! AAAGTACCGATCATGAGATA+CGG - chr3_2:77731768-77731787 None:intergenic 35.0%
ATGGGACACAAAAAAGCTAA+TGG - chr3_2:77731890-77731909 None:intergenic 35.0%
GCGGATAGTTAAGAAAATTG+AGG - chr3_2:77732114-77732133 None:intergenic 35.0%
TCAGGTAGGGACTAATAATT+TGG - chr3_2:77732256-77732275 None:intergenic 35.0%
TAATGAAGTGAACAGTCTTG+TGG + chr3_2:77732412-77732431 Msa0427050:intron 35.0%
!!! ACTTAGTTTTGACACTTGAG+AGG + chr3_2:77732580-77732599 Msa0427050:intron 35.0%
!!! CTTAGTTTTGACACTTGAGA+GGG + chr3_2:77732581-77732600 Msa0427050:intron 35.0%
! TTGCTATTAAGCTCTCTTAG+TGG + chr3_2:77732655-77732674 Msa0427050:intron 35.0%
GTTCATAATCTAAGTTGCAC+TGG + chr3_2:77732744-77732763 Msa0427050:intron 35.0%
!! ATGTGTTCCATTTTTCGTCA+AGG + chr3_2:77732769-77732788 Msa0427050:intron 35.0%
! ATGACGGTTACCTAATTTTG+AGG + chr3_2:77732796-77732815 Msa0427050:intron 35.0%
! TGACGGTTACCTAATTTTGA+GGG + chr3_2:77732797-77732816 Msa0427050:intron 35.0%
TCACGAAGTTACTATCAACA+TGG - chr3_2:77732832-77732851 None:intergenic 35.0%
TACCTTTGACATCTTGGATT+TGG - chr3_2:77733115-77733134 None:intergenic 35.0%
GAAGTTTACCTTTGACATCT+TGG - chr3_2:77733121-77733140 None:intergenic 35.0%
CAAGCAAAACAGAAGTCTAA+AGG + chr3_2:77733274-77733293 Msa0427050:CDS 35.0%
GTGCAAAGAATTCAAAGAGA+TGG + chr3_2:77733296-77733315 Msa0427050:CDS 35.0%
! TCATGTATGGTGTAATGGAA+TGG - chr3_2:77733333-77733352 None:intergenic 35.0%
TCTCTTCATGTATGGTGTAA+TGG - chr3_2:77733338-77733357 None:intergenic 35.0%
GATTTATTCACCAAATGAGG+GGG + chr3_2:77733367-77733386 Msa0427050:three_prime_UTR 35.0%
TTACAGTCTCAACAACAACT+TGG + chr3_2:77733524-77733543 Msa0427050:three_prime_UTR 35.0%
ATTGGAAAGACTTCTTGGAG+AGG + chr3_2:77729968-77729987 Msa0427050:CDS 40.0%
!!! GAACTTGGATTTTGGCTTTG+AGG + chr3_2:77730079-77730098 Msa0427050:CDS 40.0%
! GTGCCAGAAACTTTTCAACA+AGG + chr3_2:77730180-77730199 Msa0427050:intron 40.0%
ATTGCCATTCTTGGTCCAAA+TGG + chr3_2:77730232-77730251 Msa0427050:CDS 40.0%
ACATCCATTTGGACCAAGAA+TGG - chr3_2:77730239-77730258 None:intergenic 40.0%
ATTCTTGGTCCAAATGGATG+TGG + chr3_2:77730238-77730257 Msa0427050:CDS 40.0%
!! GCTGACTTGATTTAGTCAAC+AGG + chr3_2:77730446-77730465 Msa0427050:intron 40.0%
TTGATTTAGTCAACAGGCTG+AGG + chr3_2:77730452-77730471 Msa0427050:intron 40.0%
TGGAGGAGTGACGATATTAA+AGG + chr3_2:77730528-77730547 Msa0427050:CDS 40.0%
ATCAACCATCTCAATGTTCG+AGG - chr3_2:77730979-77730998 None:intergenic 40.0%
ATCCATACACCTGCATTCTT+TGG + chr3_2:77731046-77731065 Msa0427050:intron 40.0%
TCCATACACCTGCATTCTTT+GGG + chr3_2:77731047-77731066 Msa0427050:intron 40.0%
ATGAAATGCCCAAAGAATGC+AGG - chr3_2:77731058-77731077 None:intergenic 40.0%
!! AAGGGAAATGTGGTGCTATT+AGG + chr3_2:77731151-77731170 Msa0427050:intron 40.0%
AGAGATGAGAGGTAAAACAG+AGG - chr3_2:77731230-77731249 None:intergenic 40.0%
! GTTCCATGTTTTACTAGGCA+CGG + chr3_2:77731473-77731492 Msa0427050:intron 40.0%
!!! GCTGGCTTTTTGCAAATTCA+TGG + chr3_2:77731495-77731514 Msa0427050:CDS 40.0%
GGTATATCCAAGTGATTCGT+TGG - chr3_2:77731553-77731572 None:intergenic 40.0%
AAAACTCTGTATCCGATCCA+AGG + chr3_2:77731674-77731693 Msa0427050:intron 40.0%
ATATTAGTCGGTCCTTGGAT+CGG - chr3_2:77731689-77731708 None:intergenic 40.0%
GAGGCAATAAATGAGTACGA+GGG + chr3_2:77731731-77731750 Msa0427050:CDS 40.0%
ACACAAAAAAGCTAATGGCG+GGG - chr3_2:77731885-77731904 None:intergenic 40.0%
GACACAAAAAAGCTAATGGC+GGG - chr3_2:77731886-77731905 None:intergenic 40.0%
GGACACAAAAAAGCTAATGG+CGG - chr3_2:77731887-77731906 None:intergenic 40.0%
GATTCAGAGATAGTTGAAGC+AGG + chr3_2:77731938-77731957 Msa0427050:intron 40.0%
GATAGTTGAAGCAGGTTAAC+TGG + chr3_2:77731946-77731965 Msa0427050:intron 40.0%
ATGAACAAGATCGCCAAGAA+GGG - chr3_2:77732143-77732162 None:intergenic 40.0%
TATTAAGCTCTCTTAGTGGC+AGG + chr3_2:77732659-77732678 Msa0427050:intron 40.0%
CATACAGCCTTGACGAAAAA+TGG - chr3_2:77732779-77732798 None:intergenic 40.0%
! TTTTCGTCAAGGCTGTATGA+CGG + chr3_2:77732780-77732799 Msa0427050:intron 40.0%
! AGACATATGGTGATGCTGTA+AGG + chr3_2:77732889-77732908 Msa0427050:intron 40.0%
! GACATATGGTGATGCTGTAA+GGG + chr3_2:77732890-77732909 Msa0427050:intron 40.0%
AGCCAAATCCAAGATGTCAA+AGG + chr3_2:77733110-77733129 Msa0427050:CDS 40.0%
CTGTGAAACTCATATGGATG+AGG + chr3_2:77733140-77733159 Msa0427050:intron 40.0%
AAGGAAGAAGCAAAAGATGC+AGG + chr3_2:77733243-77733262 Msa0427050:CDS 40.0%
!! CTTCTGTTTTGCTTGCTGAA+AGG - chr3_2:77733269-77733288 None:intergenic 40.0%
TTGAGACTGTAAACTTCACC+AGG - chr3_2:77733516-77733535 None:intergenic 40.0%
GTACTCTTGCCACATCCATT+TGG - chr3_2:77730250-77730269 None:intergenic 45.0%
GGTTTAGAGAAGCCAATCAG+CGG + chr3_2:77730289-77730308 Msa0427050:CDS 45.0%
AGGATAACTTCACCGCTGAT+TGG - chr3_2:77730304-77730323 None:intergenic 45.0%
ATCAGCGGTGAAGTTATCCT+TGG + chr3_2:77730304-77730323 Msa0427050:CDS 45.0%
TCAGCGGTGAAGTTATCCTT+GGG + chr3_2:77730305-77730324 Msa0427050:CDS 45.0%
GCAATACATTATGCTCCCCA+AGG - chr3_2:77730324-77730343 None:intergenic 45.0%
GGCACTTGATCTGGAAAAGA+CGG + chr3_2:77730473-77730492 Msa0427050:CDS 45.0%
! TCTATTGAGTGGTGGTGAGA+AGG + chr3_2:77730602-77730621 Msa0427050:CDS 45.0%
GCGGGTAAAGAAGCAATTCT+CGG - chr3_2:77730784-77730803 None:intergenic 45.0%
TCCAACCTCGAACATTGAGA+TGG + chr3_2:77730971-77730990 Msa0427050:intron 45.0%
ACCATCTCAATGTTCGAGGT+TGG - chr3_2:77730975-77730994 None:intergenic 45.0%
! GTGCTATTAGGTTCTCACCA+TGG + chr3_2:77731163-77731182 Msa0427050:intron 45.0%
TATTAGGTTCTCACCATGGC+AGG + chr3_2:77731167-77731186 Msa0427050:intron 45.0%
ATTAGGTTCTCACCATGGCA+GGG + chr3_2:77731168-77731187 Msa0427050:intron 45.0%
CATGCTTCCATGGTACTCTT+CGG + chr3_2:77731362-77731381 Msa0427050:intron 45.0%
!! GTTGTATCCGAAGAGTACCA+TGG - chr3_2:77731372-77731391 None:intergenic 45.0%
GGATGAACCAACGAATCACT+TGG + chr3_2:77731543-77731562 Msa0427050:CDS 45.0%
CGTACTCATTTATTGCCTCC+TGG - chr3_2:77731730-77731749 None:intergenic 45.0%
GGAGGCAATAAATGAGTACG+AGG + chr3_2:77731730-77731749 Msa0427050:intron 45.0%
AGTTAAAGATGGCACTGTGC+AGG + chr3_2:77731817-77731836 Msa0427050:CDS 45.0%
! AAAAAAGCTAATGGCGGGGA+GGG - chr3_2:77731881-77731900 None:intergenic 45.0%
TGAACAAGATCGCCAAGAAG+GGG - chr3_2:77732142-77732161 None:intergenic 45.0%
GATGAACAAGATCGCCAAGA+AGG - chr3_2:77732144-77732163 None:intergenic 45.0%
TGATAGCAAATACGCCTGTG+AGG + chr3_2:77732513-77732532 Msa0427050:intron 45.0%
GATAGCAAATACGCCTGTGA+GGG + chr3_2:77732514-77732533 Msa0427050:intron 45.0%
! TAGTCCTTTTGATCCCTCAC+AGG - chr3_2:77732530-77732549 None:intergenic 45.0%
GAGAGCTTAATAGCAACAGC+TGG - chr3_2:77732651-77732670 None:intergenic 45.0%
TCTCTTAGTGGCAGGATTCA+GGG + chr3_2:77732667-77732686 Msa0427050:intron 45.0%
TGGAGAAGAATCTTGATGCC+AGG + chr3_2:77733034-77733053 Msa0427050:CDS 45.0%
GGAGAAGAATCTTGATGCCA+GGG + chr3_2:77733035-77733054 Msa0427050:CDS 45.0%
ATCAGGCTGAGAAAGAAGCA+AGG + chr3_2:77733224-77733243 Msa0427050:intron 45.0%
AAACACATTAGCATCCGCTG+TGG + chr3_2:77733598-77733617 Msa0427050:three_prime_UTR 45.0%
!!! TTTTTTTTTTACTAAAATTA+AGG + chr3_2:77732623-77732642 Msa0427050:intron 5.0%
!!! TTTTTTTTTACTAAAATTAA+GGG + chr3_2:77732624-77732643 Msa0427050:intron 5.0%
AAAATCAGGTTCCCTGTGCG+TGG + chr3_2:77730026-77730045 Msa0427050:CDS 50.0%
CAGCGGTGAAGTTATCCTTG+GGG + chr3_2:77730306-77730325 Msa0427050:CDS 50.0%
GCCCAAAGAATGCAGGTGTA+TGG - chr3_2:77731051-77731070 None:intergenic 50.0%
TTCTCACCATGGCAGGGTTT+GGG + chr3_2:77731174-77731193 Msa0427050:intron 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG - chr3_2:77731279-77731298 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr3_2:77731278-77731297 None:intergenic 50.0%
CAGCCGTGCCTAGTAAAACA+TGG - chr3_2:77731479-77731498 None:intergenic 50.0%
! CATGTTTTACTAGGCACGGC+TGG + chr3_2:77731477-77731496 Msa0427050:intron 50.0%
! AAAAAGCTAATGGCGGGGAG+GGG - chr3_2:77731880-77731899 None:intergenic 50.0%
! CAAAAAAGCTAATGGCGGGG+AGG - chr3_2:77731882-77731901 None:intergenic 50.0%
GAACAAGATCGCCAAGAAGG+GGG - chr3_2:77732141-77732160 None:intergenic 50.0%
TACGCCTGTGAGGGATCAAA+AGG + chr3_2:77732523-77732542 Msa0427050:intron 50.0%
CTCTCTTAGTGGCAGGATTC+AGG + chr3_2:77732666-77732685 Msa0427050:intron 50.0%
TTAGTGGCAGGATTCAGGGA+AGG + chr3_2:77732671-77732690 Msa0427050:intron 50.0%
TAGTGGCAGGATTCAGGGAA+GGG + chr3_2:77732672-77732691 Msa0427050:intron 50.0%
! GCGTTCAAGCTCTTTTTCCC+TGG - chr3_2:77733055-77733074 None:intergenic 50.0%
GGAAAAAGAGCTTGAACGCC+AGG + chr3_2:77733056-77733075 Msa0427050:CDS 50.0%
CACCAAATGAGGGGGATAGA+AGG + chr3_2:77733375-77733394 Msa0427050:three_prime_UTR 50.0%
CACCTTCTATCCCCCTCATT+TGG - chr3_2:77733380-77733399 None:intergenic 50.0%
TTCCACTGCTTCCACGCACA+GGG - chr3_2:77730040-77730059 None:intergenic 55.0%
! ACAGGCTGAGGCACTTGATC+TGG + chr3_2:77730464-77730483 Msa0427050:intron 55.0%
GACGGTGCTTGAGACAGTAG+AGG + chr3_2:77730491-77730510 Msa0427050:CDS 55.0%
ATCGTCACTCCTCCAGTCCT+CGG - chr3_2:77730523-77730542 None:intergenic 55.0%
GTTCTCACCATGGCAGGGTT+TGG + chr3_2:77731173-77731192 Msa0427050:intron 55.0%
TCTCACCATGGCAGGGTTTG+GGG + chr3_2:77731175-77731194 Msa0427050:intron 55.0%
GAGGGAGAGAGAGAGATGAG+AGG - chr3_2:77731241-77731260 None:intergenic 55.0%
GGGAGAGAGAGAGAGAGAGA+GGG - chr3_2:77731259-77731278 None:intergenic 55.0%
AGGGAGAGAGAGAGAGAGAG+AGG - chr3_2:77731260-77731279 None:intergenic 55.0%
GGCACTGTGCAGGATTATGC+TGG + chr3_2:77731827-77731846 Msa0427050:CDS 55.0%
! AAAAGCTAATGGCGGGGAGG+GGG - chr3_2:77731879-77731898 None:intergenic 55.0%
TATCCGCTTTGCCCCCTTCT+TGG + chr3_2:77732127-77732146 Msa0427050:intron 55.0%
CTTTGTCGTCAAGCTCAGCC+TGG - chr3_2:77733077-77733096 None:intergenic 55.0%
TTCCCTGTGCGTGGAAGCAG+TGG + chr3_2:77730035-77730054 Msa0427050:CDS 60.0%
CTTCCACTGCTTCCACGCAC+AGG - chr3_2:77730041-77730060 None:intergenic 60.0%
GACAGTAGAGGAAGCTGCCG+AGG + chr3_2:77730503-77730522 Msa0427050:CDS 60.0%
TAGAGGAAGCTGCCGAGGAC+TGG + chr3_2:77730508-77730527 Msa0427050:CDS 60.0%
ACCATGGCAGGGTTTGGGGA+AGG + chr3_2:77731179-77731198 Msa0427050:intron 60.0%
CCATGGCAGGGTTTGGGGAA+GGG + chr3_2:77731180-77731199 Msa0427050:intron 60.0%
! AAAGCTAATGGCGGGGAGGG+GGG - chr3_2:77731878-77731897 None:intergenic 60.0%
TCGCCAAGAAGGGGGCAAAG+CGG - chr3_2:77732133-77732152 None:intergenic 60.0%
TGGCAGGATTCAGGGAAGGG+TGG + chr3_2:77732675-77732694 Msa0427050:intron 60.0%
GGCAGGATTCAGGGAAGGGT+GGG + chr3_2:77732676-77732695 Msa0427050:intron 60.0%
AGGAAGCTGCCGAGGACTGG+AGG + chr3_2:77730511-77730530 Msa0427050:CDS 65.0%
CCCTTCCCCAAACCCTGCCA+TGG - chr3_2:77731183-77731202 None:intergenic 65.0%
! AAGCTAATGGCGGGGAGGGG+GGG - chr3_2:77731877-77731896 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 77729873 77733631 77729873 ID=Msa0427050;Name=Msa0427050
chr3_2 mRNA 77729873 77733631 77729873 ID=Msa0427050-mRNA-1;Parent=Msa0427050;Name=Msa0427050-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0.85|0.75|0.87|1|1|8|307|306
chr3_2 exon 77729873 77729884 77729873 ID=Msa0427050-mRNA-1:exon:20294;Parent=Msa0427050-mRNA-1
chr3_2 exon 77729966 77730106 77729966 ID=Msa0427050-mRNA-1:exon:20295;Parent=Msa0427050-mRNA-1
chr3_2 exon 77730187 77730366 77730187 ID=Msa0427050-mRNA-1:exon:20296;Parent=Msa0427050-mRNA-1
chr3_2 exon 77730468 77730623 77730468 ID=Msa0427050-mRNA-1:exon:20297;Parent=Msa0427050-mRNA-1
chr3_2 exon 77731490 77731591 77731490 ID=Msa0427050-mRNA-1:exon:20298;Parent=Msa0427050-mRNA-1
chr3_2 exon 77731731 77731859 77731731 ID=Msa0427050-mRNA-1:exon:20299;Parent=Msa0427050-mRNA-1
chr3_2 exon 77733027 77733131 77733027 ID=Msa0427050-mRNA-1:exon:20300;Parent=Msa0427050-mRNA-1
chr3_2 exon 77733229 77733631 77733229 ID=Msa0427050-mRNA-1:exon:20301;Parent=Msa0427050-mRNA-1
chr3_2 CDS 77729873 77729884 77729873 ID=Msa0427050-mRNA-1:cds;Parent=Msa0427050-mRNA-1
chr3_2 CDS 77729966 77730106 77729966 ID=Msa0427050-mRNA-1:cds;Parent=Msa0427050-mRNA-1
chr3_2 CDS 77730187 77730366 77730187 ID=Msa0427050-mRNA-1:cds;Parent=Msa0427050-mRNA-1
chr3_2 CDS 77730468 77730623 77730468 ID=Msa0427050-mRNA-1:cds;Parent=Msa0427050-mRNA-1
chr3_2 CDS 77731490 77731591 77731490 ID=Msa0427050-mRNA-1:cds;Parent=Msa0427050-mRNA-1
chr3_2 CDS 77731731 77731859 77731731 ID=Msa0427050-mRNA-1:cds;Parent=Msa0427050-mRNA-1
chr3_2 CDS 77733027 77733131 77733027 ID=Msa0427050-mRNA-1:cds;Parent=Msa0427050-mRNA-1
chr3_2 CDS 77733229 77733324 77733229 ID=Msa0427050-mRNA-1:cds;Parent=Msa0427050-mRNA-1
chr3_2 three_prime_UTR 77733325 77733631 77733325 ID=Msa0427050-mRNA-1:three_prime_utr;Parent=Msa0427050-mRNA-1
Gene Sequence

>Msa0427050

ATGCATCCTTCCAAATTGGAAAGACTTCTTGGAGAGGAACTAGTAGAGAAGCCATTTGAACGGAAACAAATGAAAATCAGGTTCCCTGTGCGTGGAAGCAGTGGAAGATCTGTTGTAACAGTTAGGAACTTGGATTTTGGCTTTGAGGATAAAAAACTTTTCAACAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTCTTGGTCCAAATGGATGTGGCAAGAGTACTTTACTAAAATTGATTATGGGTTTAGAGAAGCCAATCAGCGGTGAAGTTATCCTTGGGGAGCATAATGTATTGCCTAACTATTTCGAGCAGAATCAGGCTGAGGCACTTGATCTGGAAAAGACGGTGCTTGAGACAGTAGAGGAAGCTGCCGAGGACTGGAGGAGTGACGATATTAAAGGACTTCTTGGGCGTTGTAATTTTAAATCTGATATGCTTGATCGTAAAGTTTCTCTATTGAGTGGTGGTGAGAAGGCACGGCTGGCTTTTTGCAAATTCATGGTAAAACCATCAACTCTACTTGTTTTGGATGAACCAACGAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAAATGAGTACGAGGGCACCGTTATCACCGTATCTCATGATCGGTACTTTATAAAGCAGATAGTTAATAGAGTGATTGAAGTTAAAGATGGCACTGTGCAGGATTATGCTGGAGATTACAATTATTATTTGGAGAAGAATCTTGATGCCAGGGAAAAAGAGCTTGAACGCCAGGCTGAGCTTGACGACAAAGCTCCTAAATTGAAAGCCAAATCCAAGATGTCAAAGGCTGAGAAAGAAGCAAGGAAGAAGCAAAAGATGCAGGCCTTTCAGCAAGCAAAACAGAAGTCTAAAGGTGCAAAGAATTCAAAGAGATGGAATTAA

Protein sequence

>Msa0427050

MHPSKLERLLGEELVEKPFERKQMKIRFPVRGSSGRSVVTVRNLDFGFEDKKLFNKANLTIERGEKIAILGPNGCGKSTLLKLIMGLEKPISGEVILGEHNVLPNYFEQNQAEALDLEKTVLETVEEAAEDWRSDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYEGTVITVSHDRYFIKQIVNRVIEVKDGTVQDYAGDYNYYLEKNLDAREKELERQAELDDKAPKLKAKSKMSKAEKEARKKQKMQAFQQAKQKSKGAKNSKRWN*