Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0631840 | XP_013455017.1 | 97.647 | 255 | 6 | 0 | 1 | 255 | 1 | 255 | 0.0 | 509 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0631840 | sp|O80934|Y2766_ARATH | 78.346 | 254 | 55 | 0 | 2 | 255 | 72 | 325 | 2.35e-151 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003280 | Msa0631840 | 0.801529 | 8.624709e-49 | -8.615850e-47 |
| Msa0003470 | Msa0631840 | 0.804644 | 1.956272e-49 | -8.615850e-47 |
| Msa0008350 | Msa0631840 | 0.838103 | 3.507745e-57 | -8.615850e-47 |
| Msa0008850 | Msa0631840 | 0.847921 | 8.516309e-60 | -8.615850e-47 |
| Msa0011850 | Msa0631840 | 0.853764 | 1.925482e-61 | -8.615850e-47 |
| Msa0024680 | Msa0631840 | 0.807394 | 5.165466e-50 | -8.615850e-47 |
| Msa0027540 | Msa0631840 | 0.804093 | 2.549041e-49 | -8.615850e-47 |
| Msa0030000 | Msa0631840 | 0.862022 | 6.798896e-64 | -8.615850e-47 |
| Msa0038310 | Msa0631840 | 0.827737 | 1.325807e-54 | -8.615850e-47 |
| Msa0047470 | Msa0631840 | 0.800882 | 1.169731e-48 | -8.615850e-47 |
| Msa0050730 | Msa0631840 | 0.832249 | 1.052761e-55 | -8.615850e-47 |
| Msa0050760 | Msa0631840 | 0.806003 | 1.015569e-49 | -8.615850e-47 |
| Msa0057260 | Msa0631840 | 0.853776 | 1.910866e-61 | -8.615850e-47 |
| Msa0060600 | Msa0631840 | 0.812853 | 3.440563e-51 | -8.615850e-47 |
| Msa0075310 | Msa0631840 | 0.800865 | 1.179470e-48 | -8.615850e-47 |
| Msa0079250 | Msa0631840 | 0.801180 | 1.016797e-48 | -8.615850e-47 |
| Msa0086090 | Msa0631840 | 0.813735 | 2.202060e-51 | -8.615850e-47 |
| Msa0087110 | Msa0631840 | 0.816953 | 4.238668e-52 | -8.615850e-47 |
| Msa0094420 | Msa0631840 | 0.814254 | 1.692163e-51 | -8.615850e-47 |
| Msa0102750 | Msa0631840 | 0.810652 | 1.036228e-50 | -8.615850e-47 |
| Msa0103060 | Msa0631840 | 0.811335 | 7.371104e-51 | -8.615850e-47 |
| Msa0105340 | Msa0631840 | 0.815372 | 9.560191e-52 | -8.615850e-47 |
| Msa0105420 | Msa0631840 | 0.824450 | 8.020792e-54 | -8.615850e-47 |
| Msa0605230 | Msa0631840 | 0.804012 | 2.649359e-49 | -8.615850e-47 |
| Msa0606060 | Msa0631840 | 0.846141 | 2.616908e-59 | -8.615850e-47 |
| Msa0617830 | Msa0631840 | 0.815719 | 8.005334e-52 | -8.615850e-47 |
| Msa0619330 | Msa0631840 | 0.808393 | 3.165671e-50 | -8.615850e-47 |
| Msa0622340 | Msa0631840 | 0.803658 | 3.138001e-49 | -8.615850e-47 |
| Msa0622390 | Msa0631840 | 0.807326 | 5.337671e-50 | -8.615850e-47 |
| Msa0624730 | Msa0631840 | 0.845321 | 4.367467e-59 | -8.615850e-47 |
| Msa0626230 | Msa0631840 | 0.819108 | 1.380781e-52 | -8.615850e-47 |
| Msa0631840 | Msa0647000 | 0.822476 | 2.321148e-53 | -8.615850e-47 |
| Msa0631840 | Msa0656680 | 0.804842 | 1.778602e-49 | -8.615850e-47 |
| Msa0631840 | Msa0667220 | 0.816179 | 6.320419e-52 | -8.615850e-47 |
| Msa0631840 | Msa0670980 | 0.808186 | 3.504891e-50 | -8.615850e-47 |
| Msa0631840 | Msa0674220 | 0.851163 | 1.061533e-60 | -8.615850e-47 |
| Msa0631840 | Msa0674300 | 0.819424 | 1.169827e-52 | -8.615850e-47 |
| Msa0631840 | Msa0681890 | 0.825481 | 4.578808e-54 | -8.615850e-47 |
| Msa0631840 | Msa0686610 | 0.861004 | 1.390946e-63 | -8.615850e-47 |
| Msa0631840 | Msa0724050 | 0.804908 | 1.723708e-49 | -8.615850e-47 |
| Msa0631840 | Msa0726440 | 0.819273 | 1.266451e-52 | -8.615850e-47 |
| Msa0631840 | Msa0726610 | 0.816667 | 4.913864e-52 | -8.615850e-47 |
| Msa0631840 | Msa0740420 | 0.812476 | 4.159314e-51 | -8.615850e-47 |
| Msa0631840 | Msa0743640 | 0.802403 | 5.704178e-49 | -8.615850e-47 |
| Msa0631840 | Msa0754860 | 0.827887 | 1.220269e-54 | -8.615850e-47 |
| Msa0631840 | Msa0763880 | 0.801403 | 9.155819e-49 | -8.615850e-47 |
| Msa0631840 | Msa0787720 | 0.806110 | 9.644617e-50 | -8.615850e-47 |
| Msa0631840 | Msa0796450 | 0.818889 | 1.548229e-52 | -8.615850e-47 |
| Msa0631840 | Msa0796590 | 0.808001 | 3.838381e-50 | -8.615850e-47 |
| Msa0631840 | Msa0796810 | 0.835883 | 1.294507e-56 | -8.615850e-47 |
| Msa0631840 | Msa0812660 | 0.815473 | 9.078942e-52 | -8.615850e-47 |
| Msa0631840 | Msa0820670 | 0.833265 | 5.891291e-56 | -8.615850e-47 |
| Msa0631840 | Msa0824770 | 0.809508 | 1.827893e-50 | -8.615850e-47 |
| Msa0631840 | Msa0833940 | 0.839081 | 1.960635e-57 | -8.615850e-47 |
| Msa0631840 | Msa0834130 | 0.810458 | 1.141331e-50 | -8.615850e-47 |
| Msa0631840 | Msa0837990 | 0.816639 | 4.986622e-52 | -8.615850e-47 |
| Msa0631840 | Msa0896210 | 0.807929 | 3.975312e-50 | -8.615850e-47 |
| Msa0631840 | Msa0907700 | 0.811971 | 5.360969e-51 | -8.615850e-47 |
| Msa0631840 | Msa0922540 | 0.831230 | 1.877483e-55 | -8.615850e-47 |
| Msa0631840 | Msa0925160 | 0.811877 | 5.618297e-51 | -8.615850e-47 |
| Msa0631840 | Msa0955310 | 0.821482 | 3.943795e-53 | -8.615850e-47 |
| Msa0631840 | Msa0958020 | 0.818725 | 1.687501e-52 | -8.615850e-47 |
| Msa0631840 | Msa0971860 | 0.810770 | 9.769077e-51 | -8.615850e-47 |
| Msa0631840 | Msa0990520 | 0.824987 | 5.993277e-54 | -8.615850e-47 |
| Msa0631840 | Msa0996090 | 0.842926 | 1.918746e-58 | -8.615850e-47 |
| Msa0631840 | Msa1002040 | 0.808363 | 3.213827e-50 | -8.615850e-47 |
| Msa0631840 | Msa1015060 | 0.818689 | 1.719625e-52 | -8.615850e-47 |
| Msa0631840 | Msa1029320 | 0.814213 | 1.727445e-51 | -8.615850e-47 |
| Msa0631840 | Msa1030280 | 0.802375 | 5.780864e-49 | -8.615850e-47 |
| Msa0631840 | Msa1038320 | 0.808656 | 2.781705e-50 | -8.615850e-47 |
| Msa0631840 | Msa1043870 | 0.812643 | 3.824779e-51 | -8.615850e-47 |
| Msa0631840 | Msa1056640 | 0.825904 | 3.634134e-54 | -8.615850e-47 |
| Msa0631840 | Msa1067920 | 0.822122 | 2.804928e-53 | -8.615850e-47 |
| Msa0631840 | Msa1089530 | 0.827234 | 1.751312e-54 | -8.615850e-47 |
| Msa0631840 | Msa1092820 | 0.811971 | 5.361324e-51 | -8.615850e-47 |
| Msa0631840 | Msa1097380 | 0.810020 | 1.418373e-50 | -8.615850e-47 |
| Msa0631840 | Msa1113200 | 0.822189 | 2.705588e-53 | -8.615850e-47 |
| Msa0631840 | Msa1115330 | 0.800481 | 1.412682e-48 | -8.615850e-47 |
| Msa0631840 | Msa1142280 | 0.800183 | 1.624088e-48 | -8.615850e-47 |
| Msa0631840 | Msa1157160 | 0.805797 | 1.122403e-49 | -8.615850e-47 |
| Msa0631840 | Msa1166180 | 0.806006 | 1.014350e-49 | -8.615850e-47 |
| Msa0631840 | Msa1166280 | 0.800034 | 1.741938e-48 | -8.615850e-47 |
| Msa0631840 | Msa1172590 | 0.803679 | 3.106628e-49 | -8.615850e-47 |
| Msa0631840 | Msa1181380 | 0.801806 | 7.569162e-49 | -8.615850e-47 |
| Msa0631840 | Msa1200920 | 0.808333 | 3.260413e-50 | -8.615850e-47 |
| Msa0631840 | Msa1218650 | 0.807041 | 6.134270e-50 | -8.615850e-47 |
| Msa0631840 | Msa1220450 | -0.835346 | 1.769879e-56 | -8.615850e-47 |
| Msa0631840 | Msa1220460 | -0.830371 | 3.048754e-55 | -8.615850e-47 |
| Msa0631840 | Msa1220480 | -0.828257 | 9.941734e-55 | -8.615850e-47 |
| Msa0631840 | Msa1220740 | 0.805239 | 1.469464e-49 | -8.615850e-47 |
| Msa0631840 | Msa1223840 | 0.800349 | 1.502365e-48 | -8.615850e-47 |
| Msa0631840 | Msa1237030 | 0.802705 | 4.941916e-49 | -8.615850e-47 |
| Msa0631840 | Msa1263660 | 0.846152 | 2.599221e-59 | -8.615850e-47 |
| Msa0631840 | Msa1265070 | 0.809563 | 1.779116e-50 | -8.615850e-47 |
| Msa0631840 | Msa1276110 | 0.803224 | 3.861034e-49 | -8.615850e-47 |
| Msa0631840 | Msa1284030 | 0.820575 | 6.381205e-53 | -8.615850e-47 |
| Msa0631840 | Msa1300860 | 0.807512 | 4.874656e-50 | -8.615850e-47 |
| Msa0631840 | Msa1303720 | 0.814216 | 1.724570e-51 | -8.615850e-47 |
| Msa0631840 | Msa1303780 | 0.815894 | 7.317934e-52 | -8.615850e-47 |
| Msa0631840 | Msa1323060 | 0.838595 | 2.620240e-57 | -8.615850e-47 |
| Msa0631840 | Msa1327820 | 0.835062 | 2.087809e-56 | -8.615850e-47 |
| Msa0631840 | Msa1337730 | 0.809540 | 1.799174e-50 | -8.615850e-47 |
| Msa0631840 | Msa1341930 | 0.822320 | 2.523484e-53 | -8.615850e-47 |
| Msa0631840 | Msa1352290 | 0.830928 | 2.227306e-55 | -8.615850e-47 |
| Msa0631840 | Msa1358870 | -0.810105 | 1.359648e-50 | -8.615850e-47 |
| Msa0631840 | Msa1365040 | -0.812408 | 4.304532e-51 | -8.615850e-47 |
| Msa0631840 | Msa1367390 | -0.819123 | 1.369704e-52 | -8.615850e-47 |
| Msa0631840 | Msa1367940 | 0.811585 | 6.506018e-51 | -8.615850e-47 |
| Msa0631840 | Msa1370650 | 0.803939 | 2.743636e-49 | -8.615850e-47 |
| Msa0631840 | Msa1376530 | 0.801932 | 7.131498e-49 | -8.615850e-47 |
| Msa0631840 | Msa1381130 | 0.810011 | 1.425121e-50 | -8.615850e-47 |
| Msa0631840 | Msa1395570 | 0.840044 | 1.102126e-57 | -8.615850e-47 |
| Msa0631840 | Msa1397540 | 0.812306 | 4.530504e-51 | -8.615850e-47 |
| Msa0631840 | Msa1408790 | 0.801884 | 7.294784e-49 | -8.615850e-47 |
| Msa0631840 | Msa1419110 | 0.802875 | 4.558712e-49 | -8.615850e-47 |
| Msa0631840 | Msa1435470 | 0.812660 | 3.791908e-51 | -8.615850e-47 |
| Msa0631840 | Msa1439230 | 0.808665 | 2.770562e-50 | -8.615850e-47 |
| Msa0631840 | Msa1440600 | 0.808527 | 2.964013e-50 | -8.615850e-47 |
| Msa0631840 | Msa1447560 | 0.820284 | 7.438365e-53 | -8.615850e-47 |
| Msa0631840 | Msa1456810 | 0.854049 | 1.593746e-61 | -8.615850e-47 |
| Msa0631840 | Msa1457670 | -0.801159 | 1.026723e-48 | -8.615850e-47 |
| Msa0631840 | Msa1458920 | 0.812255 | 4.647311e-51 | -8.615850e-47 |
| Msa0631840 | Msa1463970 | 0.809993 | 1.437357e-50 | -8.615850e-47 |
| Msa0631840 | Msa1464560 | 0.835735 | 1.411119e-56 | -8.615850e-47 |
| Msa0125230 | Msa0631840 | 0.867734 | 1.100276e-65 | -8.615850e-47 |
| Msa0132620 | Msa0631840 | 0.829177 | 5.957641e-55 | -8.615850e-47 |
| Msa0139740 | Msa0631840 | 0.804187 | 2.436711e-49 | -8.615850e-47 |
| Msa0159560 | Msa0631840 | 0.802034 | 6.793279e-49 | -8.615850e-47 |
| Msa0164360 | Msa0631840 | 0.815535 | 8.796288e-52 | -8.615850e-47 |
| Msa0185390 | Msa0631840 | 0.809555 | 1.786141e-50 | -8.615850e-47 |
| Msa0207000 | Msa0631840 | 0.821976 | 3.031980e-53 | -8.615850e-47 |
| Msa0208520 | Msa0631840 | 0.809522 | 1.815342e-50 | -8.615850e-47 |
| Msa0227500 | Msa0631840 | 0.810879 | 9.254874e-51 | -8.615850e-47 |
| Msa0371610 | Msa0631840 | 0.803722 | 3.043775e-49 | -8.615850e-47 |
| Msa0378340 | Msa0631840 | 0.803278 | 3.762636e-49 | -8.615850e-47 |
| Msa0420070 | Msa0631840 | 0.809819 | 1.567320e-50 | -8.615850e-47 |
| Msa0421800 | Msa0631840 | 0.825521 | 4.479333e-54 | -8.615850e-47 |
| Msa0423110 | Msa0631840 | 0.820830 | 5.575270e-53 | -8.615850e-47 |
| Msa0423360 | Msa0631840 | -0.802704 | 4.945469e-49 | -8.615850e-47 |
| Msa0427050 | Msa0631840 | 0.834793 | 2.439824e-56 | -8.615850e-47 |
| Msa0465510 | Msa0631840 | 0.826728 | 2.313552e-54 | -8.615850e-47 |
| Msa0467800 | Msa0631840 | 0.806020 | 1.007442e-49 | -8.615850e-47 |
| Msa0467880 | Msa0631840 | 0.806466 | 8.115362e-50 | -8.615850e-47 |
| Msa0252180 | Msa0631840 | 0.852808 | 3.619608e-61 | -8.615850e-47 |
| Msa0264350 | Msa0631840 | 0.810759 | 9.824390e-51 | -8.615850e-47 |
| Msa0278620 | Msa0631840 | 0.815207 | 1.040763e-51 | -8.615850e-47 |
| Msa0284780 | Msa0631840 | 0.806795 | 6.915177e-50 | -8.615850e-47 |
| Msa0288240 | Msa0631840 | 0.816948 | 4.249723e-52 | -8.615850e-47 |
| Msa0292070 | Msa0631840 | 0.808381 | 3.185482e-50 | -8.615850e-47 |
| Msa0296760 | Msa0631840 | 0.832185 | 1.092033e-55 | -8.615850e-47 |
| Msa0301180 | Msa0631840 | 0.803202 | 3.900873e-49 | -8.615850e-47 |
| Msa0318000 | Msa0631840 | 0.820942 | 5.253303e-53 | -8.615850e-47 |
| Msa0320540 | Msa0631840 | 0.805152 | 1.532583e-49 | -8.615850e-47 |
| Msa0328210 | Msa0631840 | 0.809619 | 1.730254e-50 | -8.615850e-47 |
| Msa0336270 | Msa0631840 | 0.836612 | 8.449382e-57 | -8.615850e-47 |
| Msa0486570 | Msa0631840 | 0.846461 | 2.140603e-59 | -8.615850e-47 |
| Msa0514260 | Msa0631840 | 0.822392 | 2.428424e-53 | -8.615850e-47 |
| Msa0514990 | Msa0631840 | 0.809626 | 1.724552e-50 | -8.615850e-47 |
| Msa0524090 | Msa0631840 | 0.828249 | 9.983527e-55 | -8.615850e-47 |
| Msa0524120 | Msa0631840 | 0.837540 | 4.893142e-57 | -8.615850e-47 |
| Msa0524200 | Msa0631840 | -0.820477 | 6.718661e-53 | -8.615850e-47 |
| Msa0535450 | Msa0631840 | 0.911337 | 6.813392e-83 | -8.615850e-47 |
| Msa0540320 | Msa0631840 | 0.851604 | 7.967319e-61 | -8.615850e-47 |
| Msa0540340 | Msa0631840 | 0.804332 | 2.273076e-49 | -8.615850e-47 |
| Msa0550630 | Msa0631840 | 0.806648 | 7.428803e-50 | -8.615850e-47 |
| Msa0576600 | Msa0631840 | 0.807836 | 4.161553e-50 | -8.615850e-47 |
| Msa0577870 | Msa0631840 | 0.823650 | 1.235752e-53 | -8.615850e-47 |
| Msa0582110 | Msa0631840 | 0.851991 | 6.184584e-61 | -8.615850e-47 |
| Msa0587690 | Msa0631840 | 0.802191 | 6.307190e-49 | -8.615850e-47 |
| Msa0596100 | Msa0631840 | 0.841982 | 3.413467e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0631840 | MtrunA17_Chr4g0009941 | 97.647 | 255 | 6 | 0 | 1 | 255 | 1 | 255 | 0.0 | 509 |
| Msa0631840 | MtrunA17_Chr7g0238901 | 81.569 | 255 | 47 | 0 | 1 | 255 | 75 | 329 | 2.87e-157 | 440 |
| Msa0631840 | MtrunA17_Chr8g0338051 | 30.508 | 236 | 125 | 8 | 35 | 248 | 100 | 318 | 8.16e-25 | 100 |
| Msa0631840 | MtrunA17_Chr4g0034391 | 47.297 | 74 | 38 | 1 | 107 | 179 | 183 | 256 | 4.65e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0631840 | AT2G37660.1 | 78.346 | 254 | 55 | 0 | 2 | 255 | 72 | 325 | 2.39e-152 | 427 |
| Msa0631840 | AT5G02240.1 | 80.242 | 248 | 49 | 0 | 8 | 255 | 6 | 253 | 2.74e-149 | 417 |
| Msa0631840 | AT4G31530.1 | 31.405 | 242 | 127 | 8 | 35 | 254 | 100 | 324 | 4.21e-24 | 99.0 |
| Msa0631840 | AT4G31530.2 | 31.963 | 219 | 111 | 7 | 35 | 232 | 100 | 301 | 2.76e-22 | 94.4 |
| Msa0631840 | AT2G34460.1 | 31.373 | 255 | 137 | 11 | 9 | 251 | 49 | 277 | 1.14e-18 | 83.6 |
| Msa0631840 | AT3G18890.1 | 28.910 | 211 | 113 | 6 | 9 | 198 | 84 | 278 | 1.23e-12 | 67.8 |
Find 89 sgRNAs with CRISPR-Local
Find 341 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTGTGTTGGTTGGGTCTA+TGG | 0.227152 | 4_3:-15235655 | Msa0631840:CDS |
| ATACTATTCTTGTGGCATTC+TGG | 0.254330 | 4_3:-15233143 | Msa0631840:three_prime_UTR |
| AGACTTCAATGAGTGATTTC+AGG | 0.293709 | 4_3:-15233348 | Msa0631840:three_prime_UTR |
| TTGTTGTTTGTTGGTAGTTT+AGG | 0.300721 | 4_3:+15238708 | None:intergenic |
| TAACCATCCTTTGAACAGTT+TGG | 0.309070 | 4_3:-15235619 | Msa0631840:CDS |
| GAAGAATATCTGTCCAATTC+TGG | 0.321510 | 4_3:-15235381 | Msa0631840:CDS |
| AACCATCCTTTGAACAGTTT+GGG | 0.323678 | 4_3:-15235618 | Msa0631840:CDS |
| CCTTTGAACAGTTTGGGAAA+TGG | 0.335160 | 4_3:-15235612 | Msa0631840:CDS |
| GAAGAAAGCAAACAGAAAAT+TGG | 0.341940 | 4_3:-15236626 | Msa0631840:CDS |
| CAGATAAGCACTAATGACTT+TGG | 0.346603 | 4_3:+15233423 | None:intergenic |
| GCATCTGTACCTTGAATTGC+AGG | 0.352388 | 4_3:+15236551 | None:intergenic |
| CGTGTATGGAACACCAGAAT+TGG | 0.363435 | 4_3:+15235368 | None:intergenic |
| AAACTCAGGCCTTCCACCTT+TGG | 0.364997 | 4_3:+15236475 | None:intergenic |
| AAGAAATATTAAGATTTGTA+TGG | 0.366220 | 4_3:+15233168 | None:intergenic |
| TTCAATTCAATTCAATTCAA+TGG | 0.374172 | 4_3:-15238581 | Msa0631840:exon |
| CAAACCACTGTCCTTGTTAC+CGG | 0.374374 | 4_3:-15238547 | Msa0631840:CDS |
| CCAAACCTCTGGCAATATAT+TGG | 0.375239 | 4_3:+15236657 | None:intergenic |
| TATGATAGGTTGACTGGATT+GGG | 0.379614 | 4_3:-15236332 | Msa0631840:intron |
| AAACTGTTCAAAGGATGGTT+AGG | 0.380370 | 4_3:+15235621 | None:intergenic |
| ATTGTGTTGGTTGGGTCTAT+GGG | 0.382254 | 4_3:-15235654 | Msa0631840:CDS |
| CCAATATATTGCCAGAGGTT+TGG | 0.384643 | 4_3:-15236657 | Msa0631840:CDS |
| AGATGAAGAAAAGAAGGTTC+TGG | 0.388347 | 4_3:+15238664 | None:intergenic |
| AGATAAGCACTAATGACTTT+GGG | 0.391470 | 4_3:+15233424 | None:intergenic |
| TTCAGAAATAAGTTAGATAT+AGG | 0.394570 | 4_3:-15233380 | Msa0631840:three_prime_UTR |
| AATAGCATTAGCACCTGTTC+AGG | 0.409482 | 4_3:+15236431 | None:intergenic |
| AATTGCAGGAACAATGCTTT+CGG | 0.413542 | 4_3:+15236565 | None:intergenic |
| AAGAGGTTGTTGTTGTTTGT+TGG | 0.420134 | 4_3:+15238699 | None:intergenic |
| AAAGCCTTGAAGTCCTTTGT+TGG | 0.422367 | 4_3:+15233539 | None:intergenic |
| ACCGGTGCTGGTGGTCGAAC+AGG | 0.435417 | 4_3:-15238529 | Msa0631840:intron |
| CAAACCCAGGTTTCATTTGT+GGG | 0.437050 | 4_3:+15236504 | None:intergenic |
| GTTGGTTCACCTGCACCCTC+AGG | 0.437593 | 4_3:+15233557 | None:intergenic |
| ATTCAATTCAATTCAATGGC+AGG | 0.439004 | 4_3:-15238577 | Msa0631840:exon |
| ATATGATAGGTTGACTGGAT+TGG | 0.441585 | 4_3:-15236333 | Msa0631840:intron |
| TTTGGGAAATGGAAATATAC+TGG | 0.444100 | 4_3:-15235601 | Msa0631840:intron |
| AGCATTGTTCCTGCAATTCA+AGG | 0.445346 | 4_3:-15236560 | Msa0631840:CDS |
| TCAAACCCAGGTTTCATTTG+TGG | 0.465991 | 4_3:+15236503 | None:intergenic |
| TGAACCAACAAAGGACTTCA+AGG | 0.468496 | 4_3:-15233543 | Msa0631840:CDS |
| GGTGTTCGAGGACTCATTGT+AGG | 0.469552 | 4_3:-15234532 | Msa0631840:CDS |
| ACTGTCCTTGTTACCGGTGC+TGG | 0.470130 | 4_3:-15238541 | Msa0631840:CDS |
| GTGTACCTTATGATCGTGTA+TGG | 0.472644 | 4_3:+15235354 | None:intergenic |
| TTCTGATCTAACCAAACCTC+TGG | 0.473775 | 4_3:+15236646 | None:intergenic |
| TGTAGCAGAAGTCTGTGTTC+AGG | 0.473986 | 4_3:-15234458 | Msa0631840:intron |
| TTGACAGGCACTAAATTATG+AGG | 0.476024 | 4_3:-15233615 | Msa0631840:intron |
| TGAAGCATATTGTGTTGGTT+GGG | 0.478830 | 4_3:-15235662 | Msa0631840:CDS |
| TGCTACATCAGCTCTAGGTA+TGG | 0.479729 | 4_3:+15234474 | None:intergenic |
| TGTTGGTAGTTTAGGAACAT+TGG | 0.492480 | 4_3:+15238716 | None:intergenic |
| TCAGGCCTTCCACCTTTGGT+TGG | 0.499708 | 4_3:+15236479 | None:intergenic |
| TTCCCAAACTGTTCAAAGGA+TGG | 0.501526 | 4_3:+15235616 | None:intergenic |
| AACTGTTCAAAGGATGGTTA+GGG | 0.504635 | 4_3:+15235622 | None:intergenic |
| CCATTTCCCAAACTGTTCAA+AGG | 0.506648 | 4_3:+15235612 | None:intergenic |
| GTGTTCCATACACGATCATA+AGG | 0.512424 | 4_3:-15235359 | Msa0631840:intron |
| TGATGGTGCATATCCTGAAC+AGG | 0.512492 | 4_3:-15236444 | Msa0631840:intron |
| CCATGAACAGCTAAGGCTGC+AGG | 0.516056 | 4_3:-15235687 | Msa0631840:intron |
| GTGAAGCATATTGTGTTGGT+TGG | 0.518358 | 4_3:-15235663 | Msa0631840:CDS |
| GATAAAGAAGGAGGTGTTCG+AGG | 0.519821 | 4_3:-15234544 | Msa0631840:CDS |
| GCATCAAAACCTGAGGGTGC+AGG | 0.524749 | 4_3:-15233566 | Msa0631840:CDS |
| TTATGAGGAGACTAAATTCA+AGG | 0.530143 | 4_3:-15233600 | Msa0631840:CDS |
| TATATCTAACTTATTTCTGA+AGG | 0.530502 | 4_3:+15233382 | None:intergenic |
| TTTCTTTGATACTATTCTTG+TGG | 0.534447 | 4_3:-15233151 | Msa0631840:three_prime_UTR |
| GGAAAGATTGTATGATCAAG+AGG | 0.540030 | 4_3:+15233189 | None:intergenic |
| GTGTTGGTTGGGTCTATGGG+TGG | 0.540126 | 4_3:-15235651 | Msa0631840:CDS |
| TGATGAAGATGAAGAAAAGA+AGG | 0.540364 | 4_3:+15238658 | None:intergenic |
| CCTTGTTGATTCAGACCTGG+TGG | 0.541562 | 4_3:-15234574 | Msa0631840:intron |
| GCTGTCCCACAAATGAAACC+TGG | 0.549601 | 4_3:-15236509 | Msa0631840:CDS |
| ACCTGTTCGACCACCAGCAC+CGG | 0.551491 | 4_3:+15238528 | None:intergenic |
| GAAAGCAAACAGAAAATTGG+TGG | 0.572686 | 4_3:-15236623 | Msa0631840:CDS |
| CCTTTGGTTGGATCAAACCC+AGG | 0.573204 | 4_3:+15236491 | None:intergenic |
| GGTGGCTTGCTTGATAAAGA+AGG | 0.575976 | 4_3:-15234556 | Msa0631840:CDS |
| GTGTTCGAGGACTCATTGTA+GGG | 0.578516 | 4_3:-15234531 | Msa0631840:CDS |
| TCTTTATCAAGCAAGCCACC+AGG | 0.585110 | 4_3:+15234559 | None:intergenic |
| GGGTTTGATCCAACCAAAGG+TGG | 0.593347 | 4_3:-15236488 | Msa0631840:CDS |
| GACCACCAGCACCGGTAACA+AGG | 0.596740 | 4_3:+15238536 | None:intergenic |
| GTCCTTGTTACCGGTGCTGG+TGG | 0.600483 | 4_3:-15238538 | Msa0631840:CDS |
| TTGATCCAACCAAAGGTGGA+AGG | 0.601871 | 4_3:-15236484 | Msa0631840:CDS |
| ACTTCTGCTACATCAGCTCT+AGG | 0.602986 | 4_3:+15234469 | None:intergenic |
| TCGAGGACTCATTGTAGGGA+AGG | 0.603080 | 4_3:-15234527 | Msa0631840:CDS |
| TCTGGATTATGTCAGTGAAG+AGG | 0.610477 | 4_3:+15238682 | None:intergenic |
| CGCGACCAATATATTGCCAG+AGG | 0.611486 | 4_3:-15236662 | Msa0631840:CDS |
| CTGTCCCACAAATGAAACCT+GGG | 0.620890 | 4_3:-15236508 | Msa0631840:CDS |
| CCATCATCGAAATAAAACTC+AGG | 0.630148 | 4_3:+15236461 | None:intergenic |
| AGGAGTGAAGCATATTGTGT+TGG | 0.636269 | 4_3:-15235667 | Msa0631840:CDS |
| GGGTGCAGGTGAACCAACAA+AGG | 0.644031 | 4_3:-15233552 | Msa0631840:CDS |
| GACCTAGCATCAAAACCTGA+GGG | 0.644948 | 4_3:-15233572 | Msa0631840:CDS |
| CCTGGGTTTGATCCAACCAA+AGG | 0.647766 | 4_3:-15236491 | Msa0631840:CDS |
| ATGTGATTATTGTCTAACAA+TGG | 0.650932 | 4_3:-15233455 | Msa0631840:three_prime_UTR |
| TGACCTAGCATCAAAACCTG+AGG | 0.657872 | 4_3:-15233573 | Msa0631840:CDS |
| TTAGGAACATTGGATCTACG+TGG | 0.725497 | 4_3:+15238726 | None:intergenic |
| AGCACCGGTAACAAGGACAG+TGG | 0.733144 | 4_3:+15238543 | None:intergenic |
| GGCTTGCTTGATAAAGAAGG+AGG | 0.735031 | 4_3:-15234553 | Msa0631840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATAAAATAAAATAAAA+TGG | + | chr4_3:15235878-15235897 | None:intergenic | 0.0% |
| !!! | AGTTTTCAATTTTTTTAAAT+TGG | - | chr4_3:15233454-15233473 | Msa0631840:three_prime_UTR | 10.0% |
| !!! | GTTTTCAATTTTTTTAAATT+GGG | - | chr4_3:15233455-15233474 | Msa0631840:three_prime_UTR | 10.0% |
| !!! | TTTTCAATTTTTTTAAATTG+GGG | - | chr4_3:15233456-15233475 | Msa0631840:three_prime_UTR | 10.0% |
| !!! | AATTTCATTTATTTGAAATT+GGG | - | chr4_3:15233495-15233514 | Msa0631840:exon | 10.0% |
| !! | TTCTTATTAAAAAAAAAAAG+TGG | - | chr4_3:15233903-15233922 | Msa0631840:intron | 10.0% |
| !!! | AAAAACAATAAAAACTATTT+TGG | + | chr4_3:15234441-15234460 | None:intergenic | 10.0% |
| !!! | TATATTTTAAAAAACTGAAT+CGG | - | chr4_3:15238159-15238178 | Msa0631840:intron | 10.0% |
| !!! | ATTACATTGTAATTGTTTTA+GGG | - | chr4_3:15233381-15233400 | Msa0631840:three_prime_UTR | 15.0% |
| !! | TCAAATAAATGAAATTCTAA+AGG | + | chr4_3:15233491-15233510 | None:intergenic | 15.0% |
| !!! | GAATTTCATTTATTTGAAAT+TGG | - | chr4_3:15233494-15233513 | Msa0631840:exon | 15.0% |
| !!! | ATTTCATTTATTTGAAATTG+GGG | - | chr4_3:15233496-15233515 | Msa0631840:exon | 15.0% |
| !!! | AAAAGTATTATACACATTTA+AGG | + | chr4_3:15235645-15235664 | None:intergenic | 15.0% |
| !!! | TTAAATGTGTATAATACTTT+TGG | - | chr4_3:15235644-15235663 | Msa0631840:CDS | 15.0% |
| !! | AAAAAAATCTAAGCATATAT+AGG | - | chr4_3:15237041-15237060 | Msa0631840:intron | 15.0% |
| !! | AAAAAATCTAAGCATATATA+GGG | - | chr4_3:15237042-15237061 | Msa0631840:intron | 15.0% |
| !! | ATCAAATGATAAAAGAAAAA+TGG | + | chr4_3:15237835-15237854 | None:intergenic | 15.0% |
| !!! | GTTTTTTAAAATATAGTCAT+TGG | + | chr4_3:15238154-15238173 | None:intergenic | 15.0% |
| !! | AAGAAATATTAAGATTTGTA+TGG | + | chr4_3:15238672-15238691 | None:intergenic | 15.0% |
| !! | AAAACAAAAACAATACTCAA+TGG | + | chr4_3:15233224-15233243 | None:intergenic | 20.0% |
| !! | TTCAATTCAATTCAATTCAA+TGG | - | chr4_3:15233256-15233275 | Msa0631840:three_prime_UTR | 20.0% |
| !!! | GATTACATTGTAATTGTTTT+AGG | - | chr4_3:15233380-15233399 | Msa0631840:three_prime_UTR | 20.0% |
| !! | TATCATTATTAATATGCCAA+TGG | + | chr4_3:15233602-15233621 | None:intergenic | 20.0% |
| !!! | CAAATGTATGTTTTAACAAA+AGG | + | chr4_3:15233813-15233832 | None:intergenic | 20.0% |
| !! | AAGAAACAATATAATGAGTA+TGG | - | chr4_3:15234329-15234348 | Msa0631840:intron | 20.0% |
| !!! | ACGTAAACTCAATTTTTTTT+AGG | - | chr4_3:15234372-15234391 | Msa0631840:intron | 20.0% |
| !!! | AACAATAAAAACTATTTTGG+AGG | + | chr4_3:15234438-15234457 | None:intergenic | 20.0% |
| !!! | TAATGGATATTAAGATGTTT+AGG | - | chr4_3:15234852-15234871 | Msa0631840:intron | 20.0% |
| !! | AAAATATTCTTAGCATACAT+AGG | + | chr4_3:15235440-15235459 | None:intergenic | 20.0% |
| !! | GATCATTATATTATTGTGTT+TGG | + | chr4_3:15235777-15235796 | None:intergenic | 20.0% |
| !!! | GAATTTTTTTAAAGTTTACC+AGG | + | chr4_3:15236078-15236097 | None:intergenic | 20.0% |
| !! | TTTAAAAAAATTCCTAACCA+AGG | - | chr4_3:15236085-15236104 | Msa0631840:intron | 20.0% |
| !! | AAATGAAGTAACTAAAGTAT+TGG | + | chr4_3:15236277-15236296 | None:intergenic | 20.0% |
| !!! | TTTCATAGTCTTAGAATTTT+CGG | - | chr4_3:15236294-15236313 | Msa0631840:intron | 20.0% |
| !! | TATAGTTTCATATTAATTGC+AGG | - | chr4_3:15236416-15236435 | Msa0631840:intron | 20.0% |
| !!! | AACTTCTATATGTTTTAACA+AGG | + | chr4_3:15236519-15236538 | None:intergenic | 20.0% |
| !!! | TAAAAAACTTTTAGAATACC+TGG | - | chr4_3:15236722-15236741 | Msa0631840:intron | 20.0% |
| !!! | AATAGTGATTTGTTCAAATT+CGG | + | chr4_3:15236866-15236885 | None:intergenic | 20.0% |
| !! | ATATTATCTCTTATAGAACT+TGG | - | chr4_3:15237403-15237422 | Msa0631840:intron | 20.0% |
| !! | TATTATCTCTTATAGAACTT+GGG | - | chr4_3:15237404-15237423 | Msa0631840:intron | 20.0% |
| !!! | ATAATTTTGGGATGTTTTTT+TGG | + | chr4_3:15237464-15237483 | None:intergenic | 20.0% |
| !! | AAATGATAAAAGAAAAATGG+CGG | + | chr4_3:15237832-15237851 | None:intergenic | 20.0% |
| !!! | TATATCTAACTTATTTCTGA+AGG | + | chr4_3:15238458-15238477 | None:intergenic | 20.0% |
| !! | TTCAGAAATAAGTTAGATAT+AGG | - | chr4_3:15238457-15238476 | Msa0631840:intron | 20.0% |
| ! | GTTTATTTATTGTGCCTTTA+GGG | - | chr4_3:15233518-15233537 | Msa0631840:CDS | 25.0% |
| ! | TTTATTTATTGTGCCTTTAG+GGG | - | chr4_3:15233519-15233538 | Msa0631840:CDS | 25.0% |
| !! | GAAAATTCTCATTGTTGTTA+GGG | + | chr4_3:15233557-15233576 | None:intergenic | 25.0% |
| !! | AGAAAATTCTCATTGTTGTT+AGG | + | chr4_3:15233558-15233577 | None:intergenic | 25.0% |
| !! | TGAATTTTGTTAGTTACCAT+TGG | - | chr4_3:15233583-15233602 | Msa0631840:CDS | 25.0% |
| ! | TCTTCTACTTCAATAATAGT+CGG | + | chr4_3:15233643-15233662 | None:intergenic | 25.0% |
| ! | AGAAAAGAAGAAACATAATC+TGG | + | chr4_3:15233887-15233906 | None:intergenic | 25.0% |
| !! | ATATTGGGCTTTTCTAAATT+TGG | - | chr4_3:15234281-15234300 | Msa0631840:intron | 25.0% |
| ! | ATGGCATACTATATTTAAGT+AGG | - | chr4_3:15234509-15234528 | Msa0631840:CDS | 25.0% |
| ! | AGAACAAAAACTTTGTGTAA+TGG | - | chr4_3:15234835-15234854 | Msa0631840:intron | 25.0% |
| ! | TTCTCAATTAGGTGATAAAA+AGG | + | chr4_3:15235091-15235110 | None:intergenic | 25.0% |
| ! | AACCTATCATATGAAAAAGT+AGG | + | chr4_3:15235496-15235515 | None:intergenic | 25.0% |
| !! | TACACATTTAAGGCATATTT+AGG | + | chr4_3:15235635-15235654 | None:intergenic | 25.0% |
| !! | TTGAAGTTTTCAATCTTCTT+AGG | - | chr4_3:15235687-15235706 | Msa0631840:intron | 25.0% |
| ! | TTTAAAAACATTCCAAATGG+GGG | + | chr4_3:15235728-15235747 | None:intergenic | 25.0% |
| ! | GTTTAAAAACATTCCAAATG+GGG | + | chr4_3:15235729-15235748 | None:intergenic | 25.0% |
| ! | CGTTTAAAAACATTCCAAAT+GGG | + | chr4_3:15235730-15235749 | None:intergenic | 25.0% |
| !!! | CCATTTGGAATGTTTTTAAA+CGG | - | chr4_3:15235728-15235747 | Msa0631840:intron | 25.0% |
| ! | GAAAATGAAAACAGAAAACA+TGG | + | chr4_3:15235810-15235829 | None:intergenic | 25.0% |
| ! | TTGTGAATAATTGCGATAAA+GGG | + | chr4_3:15235989-15236008 | None:intergenic | 25.0% |
| !!! | AATTTTTAGTTGGGAATCTT+AGG | + | chr4_3:15236055-15236074 | None:intergenic | 25.0% |
| !!! | TTTACCAGGAATTTTTAGTT+GGG | + | chr4_3:15236064-15236083 | None:intergenic | 25.0% |
| !!! | TTCATAGTCTTAGAATTTTC+GGG | - | chr4_3:15236295-15236314 | Msa0631840:intron | 25.0% |
| ! | TTTCATATTAATTGCAGGTT+TGG | - | chr4_3:15236421-15236440 | Msa0631840:intron | 25.0% |
| ! | GTATATTCAAAATAGTTTCC+TGG | + | chr4_3:15236667-15236686 | None:intergenic | 25.0% |
| !!! | AGTTTTTTAACTCAATCAAC+TGG | + | chr4_3:15236711-15236730 | None:intergenic | 25.0% |
| ! | ATATATAGGGAATCTACAAT+TGG | - | chr4_3:15237055-15237074 | Msa0631840:intron | 25.0% |
| !!! | GAGCATTTGTTGATAATTTT+GGG | + | chr4_3:15237476-15237495 | None:intergenic | 25.0% |
| ! | CATAATCATTGAAATTGTAG+TGG | - | chr4_3:15237518-15237537 | Msa0631840:intron | 25.0% |
| ! | ACAAAATTGACTAAAAAGAG+TGG | + | chr4_3:15237804-15237823 | None:intergenic | 25.0% |
| ! | TTGAATCTTGAATTACTTTC+AGG | - | chr4_3:15237861-15237880 | Msa0631840:intron | 25.0% |
| !!! | TCGTTTTTGATTTCAAATGT+GGG | - | chr4_3:15238339-15238358 | Msa0631840:intron | 25.0% |
| ! | ATGTGATTATTGTCTAACAA+TGG | - | chr4_3:15238382-15238401 | Msa0631840:intron | 25.0% |
| ! | TTTCTTTGATACTATTCTTG+TGG | - | chr4_3:15238686-15238705 | Msa0631840:five_prime_UTR | 25.0% |
| !!! | ACACGTAGCTTTTTTTATAT+AGG | + | chr4_3:15238742-15238761 | None:intergenic | 25.0% |
| !! | TTGTTGTTTGTTGGTAGTTT+AGG | + | chr4_3:15233132-15233151 | None:intergenic | 30.0% |
| TGATGAAGATGAAGAAAAGA+AGG | + | chr4_3:15233182-15233201 | None:intergenic | 30.0% | |
| ATTCAATTCAATTCAATGGC+AGG | - | chr4_3:15233260-15233279 | Msa0631840:three_prime_UTR | 30.0% | |
| !!! | TGTTTTAGGGTTACAGAATT+AGG | - | chr4_3:15233394-15233413 | Msa0631840:three_prime_UTR | 30.0% |
| !!! | GTTTTAGGGTTACAGAATTA+GGG | - | chr4_3:15233395-15233414 | Msa0631840:three_prime_UTR | 30.0% |
| GGTTTATTTATTGTGCCTTT+AGG | - | chr4_3:15233517-15233536 | Msa0631840:CDS | 30.0% | |
| GTACTAAAAAAAACCCCTAA+AGG | + | chr4_3:15233535-15233554 | None:intergenic | 30.0% | |
| CTTGTGAATGAGTATTTGTT+AGG | - | chr4_3:15233672-15233691 | Msa0631840:intron | 30.0% | |
| AAGAAGAAACATAATCTGGA+TGG | + | chr4_3:15233883-15233902 | None:intergenic | 30.0% | |
| AGAAGATAAAGTTAGTGTGT+TGG | - | chr4_3:15234229-15234248 | Msa0631840:intron | 30.0% | |
| GACTGGACATTCTTTATATT+GGG | - | chr4_3:15234266-15234285 | Msa0631840:intron | 30.0% | |
| !!! | GGTTCACTGTTTTTTATTGA+TGG | - | chr4_3:15234490-15234509 | Msa0631840:CDS | 30.0% |
| ! | TTTCTGATGTTTGTTGGAAA+TGG | - | chr4_3:15234761-15234780 | Msa0631840:intron | 30.0% |
| TTACTTGCTTAGAGAATGTT+GGG | - | chr4_3:15234796-15234815 | Msa0631840:intron | 30.0% | |
| TGGATATTAAGATGTTTAGG+TGG | - | chr4_3:15234855-15234874 | Msa0631840:intron | 30.0% | |
| TCTACTAGTAGTATATGACT+TGG | - | chr4_3:15234958-15234977 | Msa0631840:intron | 30.0% | |
| ! | TATTGACTATTGTACGAGAA+CGG | + | chr4_3:15235046-15235065 | None:intergenic | 30.0% |
| !!! | GATTTGTTGGTTAACTTTTC+AGG | - | chr4_3:15235121-15235140 | Msa0631840:intron | 30.0% |
| GAAGAAAGCAAACAGAAAAT+TGG | - | chr4_3:15235211-15235230 | Msa0631840:intron | 30.0% | |
| !! | GTGCTGATGATATTTTCATT+GGG | - | chr4_3:15235236-15235255 | Msa0631840:intron | 30.0% |
| ! | TGCTGATGATATTTTCATTG+GGG | - | chr4_3:15235237-15235256 | Msa0631840:intron | 30.0% |
| !!! | GACCTACTTTTTCATATGAT+AGG | - | chr4_3:15235491-15235510 | Msa0631840:intron | 30.0% |
| !! | TTTTCATATGATAGGTTGAC+TGG | - | chr4_3:15235499-15235518 | Msa0631840:intron | 30.0% |
| CAGAAAAATCAAATAGATGC+TGG | - | chr4_3:15235528-15235547 | Msa0631840:intron | 30.0% | |
| TTCTTTCCATTACTCATATG+CGG | - | chr4_3:15235565-15235584 | Msa0631840:intron | 30.0% | |
| TTCAATCTTCTTAGGATTCT+TGG | - | chr4_3:15235695-15235714 | Msa0631840:intron | 30.0% | |
| CCGTTTAAAAACATTCCAAA+TGG | + | chr4_3:15235731-15235750 | None:intergenic | 30.0% | |
| GTTGTGAATAATTGCGATAA+AGG | + | chr4_3:15235990-15236009 | None:intergenic | 30.0% | |
| !!! | GTTTACCAGGAATTTTTAGT+TGG | + | chr4_3:15236065-15236084 | None:intergenic | 30.0% |
| TTTGGGAAATGGAAATATAC+TGG | - | chr4_3:15236236-15236255 | Msa0631840:intron | 30.0% | |
| TGGATATCAAGATAATATCG+CGG | + | chr4_3:15236691-15236710 | None:intergenic | 30.0% | |
| TTCAAACCATTGTCAATAAG+TGG | - | chr4_3:15236907-15236926 | Msa0631840:intron | 30.0% | |
| TTATAGCCACTTATTGACAA+TGG | + | chr4_3:15236916-15236935 | None:intergenic | 30.0% | |
| ATTTCAATGTACTTTGTTGC+TGG | - | chr4_3:15237188-15237207 | Msa0631840:intron | 30.0% | |
| !!! | TCTAGGTATGGTTTTAGTTT+CGG | + | chr4_3:15237354-15237373 | None:intergenic | 30.0% |
| !!! | CGAGCATTTGTTGATAATTT+TGG | + | chr4_3:15237477-15237496 | None:intergenic | 30.0% |
| !! | ACTACAGATCTGTATTGATT+GGG | + | chr4_3:15237680-15237699 | None:intergenic | 30.0% |
| ! | CACTTTCTAGTAAAAACAAG+TGG | + | chr4_3:15237923-15237942 | None:intergenic | 30.0% |
| TCAAGGTTCATATTGTGAAT+TGG | + | chr4_3:15238014-15238033 | None:intergenic | 30.0% | |
| ! | CTTGATTTGATAACCATGTA+GGG | - | chr4_3:15238029-15238048 | Msa0631840:intron | 30.0% |
| TTATGAGGAGACTAAATTCA+AGG | - | chr4_3:15238237-15238256 | Msa0631840:intron | 30.0% | |
| TCAAAAACGAGAATTGATCT+GGG | + | chr4_3:15238329-15238348 | None:intergenic | 30.0% | |
| ATCAAAAACGAGAATTGATC+TGG | + | chr4_3:15238330-15238349 | None:intergenic | 30.0% | |
| !!! | CTCGTTTTTGATTTCAAATG+TGG | - | chr4_3:15238338-15238357 | Msa0631840:intron | 30.0% |
| AGATAAGCACTAATGACTTT+GGG | + | chr4_3:15238416-15238435 | None:intergenic | 30.0% | |
| !! | TGTTGGTAGTTTAGGAACAT+TGG | + | chr4_3:15233124-15233143 | None:intergenic | 35.0% |
| !! | AAGAGGTTGTTGTTGTTTGT+TGG | + | chr4_3:15233141-15233160 | None:intergenic | 35.0% |
| AGATGAAGAAAAGAAGGTTC+TGG | + | chr4_3:15233176-15233195 | None:intergenic | 35.0% | |
| ! | AAAAGACTAGTCCATTAGGT+GGG | + | chr4_3:15233754-15233773 | None:intergenic | 35.0% |
| !!! | ACCTAATGGACTAGTCTTTT+GGG | - | chr4_3:15233754-15233773 | Msa0631840:intron | 35.0% |
| ATTCTGAATGAGAATCAACG+CGG | + | chr4_3:15233929-15233948 | None:intergenic | 35.0% | |
| TTCAGAATCACATAATTCGC+TGG | - | chr4_3:15233941-15233960 | Msa0631840:intron | 35.0% | |
| TCAGAATCACATAATTCGCT+GGG | - | chr4_3:15233942-15233961 | Msa0631840:intron | 35.0% | |
| TGAAAGTCAGTTGAAGAAAC+TGG | - | chr4_3:15234169-15234188 | Msa0631840:intron | 35.0% | |
| GAAAGTCAGTTGAAGAAACT+GGG | - | chr4_3:15234170-15234189 | Msa0631840:intron | 35.0% | |
| !! | ATAAAGTTAGTGTGTTGGCT+GGG | - | chr4_3:15234234-15234253 | Msa0631840:intron | 35.0% |
| GGACTGGACATTCTTTATAT+TGG | - | chr4_3:15234265-15234284 | Msa0631840:intron | 35.0% | |
| GAGAAGCAATTCTCTTCATT+GGG | + | chr4_3:15234307-15234326 | None:intergenic | 35.0% | |
| TGAGAAGCAATTCTCTTCAT+TGG | + | chr4_3:15234308-15234327 | None:intergenic | 35.0% | |
| AGAAACTCTAAATGCTAGCA+TGG | - | chr4_3:15234468-15234487 | Msa0631840:CDS | 35.0% | |
| GAAACTCTAAATGCTAGCAT+GGG | - | chr4_3:15234469-15234488 | Msa0631840:CDS | 35.0% | |
| AGAAGAATTCGATACGTGTA+GGG | + | chr4_3:15234577-15234596 | None:intergenic | 35.0% | |
| TAGAAGAATTCGATACGTGT+AGG | + | chr4_3:15234578-15234597 | None:intergenic | 35.0% | |
| !! | TGTTGGTTTCTGATGTTTGT+TGG | - | chr4_3:15234755-15234774 | Msa0631840:intron | 35.0% |
| CTTACTTGCTTAGAGAATGT+TGG | - | chr4_3:15234795-15234814 | Msa0631840:intron | 35.0% | |
| TACTTGCTTAGAGAATGTTG+GGG | - | chr4_3:15234797-15234816 | Msa0631840:intron | 35.0% | |
| CACATTGAGAGTTCTCAATT+AGG | + | chr4_3:15235102-15235121 | None:intergenic | 35.0% | |
| ! | GAACTCTCAATGTGATTTGT+TGG | - | chr4_3:15235108-15235127 | Msa0631840:intron | 35.0% |
| GAAAGCAAACAGAAAATTGG+TGG | - | chr4_3:15235214-15235233 | Msa0631840:intron | 35.0% | |
| !!! | GGTGCTGATGATATTTTCAT+TGG | - | chr4_3:15235235-15235254 | Msa0631840:intron | 35.0% |
| AATTGCAGGAACAATGCTTT+CGG | + | chr4_3:15235275-15235294 | None:intergenic | 35.0% | |
| CCATCATCGAAATAAAACTC+AGG | + | chr4_3:15235379-15235398 | None:intergenic | 35.0% | |
| !!! | CCTGAGTTTTATTTCGATGA+TGG | - | chr4_3:15235376-15235395 | Msa0631840:CDS | 35.0% |
| ! | ATATGATAGGTTGACTGGAT+TGG | - | chr4_3:15235504-15235523 | Msa0631840:intron | 35.0% |
| ! | TATGATAGGTTGACTGGATT+GGG | - | chr4_3:15235505-15235524 | Msa0631840:intron | 35.0% |
| ! | TGAGTAATGGAAAGAAAGCA+TGG | + | chr4_3:15235561-15235580 | None:intergenic | 35.0% |
| GCATATTTAGGAATCAAGAC+TGG | + | chr4_3:15235623-15235642 | None:intergenic | 35.0% | |
| TAATTGCGATAAAGGGAAGA+CGG | + | chr4_3:15235982-15236001 | None:intergenic | 35.0% | |
| TACTTCCTAAATTGCTAGCA+AGG | + | chr4_3:15236025-15236044 | None:intergenic | 35.0% | |
| CTAGCAATTTAGGAAGTAAG+CGG | - | chr4_3:15236027-15236046 | Msa0631840:intron | 35.0% | |
| TAGCAATTTAGGAAGTAAGC+GGG | - | chr4_3:15236028-15236047 | Msa0631840:intron | 35.0% | |
| GATTCCCAACTAAAAATTCC+TGG | - | chr4_3:15236057-15236076 | Msa0631840:intron | 35.0% | |
| TTTATCTCCATGAACAGCTA+AGG | - | chr4_3:15236143-15236162 | Msa0631840:intron | 35.0% | |
| !! | TGAAGCATATTGTGTTGGTT+GGG | - | chr4_3:15236175-15236194 | Msa0631840:intron | 35.0% |
| AACTGTTCAAAGGATGGTTA+GGG | + | chr4_3:15236218-15236237 | None:intergenic | 35.0% | |
| AAACTGTTCAAAGGATGGTT+AGG | + | chr4_3:15236219-15236238 | None:intergenic | 35.0% | |
| TAACCATCCTTTGAACAGTT+TGG | - | chr4_3:15236218-15236237 | Msa0631840:intron | 35.0% | |
| AACCATCCTTTGAACAGTTT+GGG | - | chr4_3:15236219-15236238 | Msa0631840:intron | 35.0% | |
| GAAGAATATCTGTCCAATTC+TGG | - | chr4_3:15236456-15236475 | Msa0631840:CDS | 35.0% | |
| GGTTCAGCTATGATTACTAA+AGG | + | chr4_3:15236646-15236665 | None:intergenic | 35.0% | |
| TTAGTAATCATAGCTGAACC+AGG | - | chr4_3:15236646-15236665 | Msa0631840:CDS | 35.0% | |
| ! | TCTACATAGTTTGTCGATCA+CGG | + | chr4_3:15236991-15237010 | None:intergenic | 35.0% |
| CGACAAACTATGTAGATACT+TGG | - | chr4_3:15236995-15237014 | Msa0631840:intron | 35.0% | |
| TACGTACTCATCTAATTGCT+TGG | - | chr4_3:15237107-15237126 | Msa0631840:intron | 35.0% | |
| ACGTACTCATCTAATTGCTT+GGG | - | chr4_3:15237108-15237127 | Msa0631840:intron | 35.0% | |
| !! | TTTTTGGTATCAGTGGAAGT+TGG | + | chr4_3:15237448-15237467 | None:intergenic | 35.0% |
| !!! | GGATGTTTTTTTGGTATCAG+TGG | + | chr4_3:15237455-15237474 | None:intergenic | 35.0% |
| AAATGCTCGAGTGAATCATA+TGG | - | chr4_3:15237488-15237507 | Msa0631840:intron | 35.0% | |
| ! | TGGCTCGTGAATTTGTTTAT+TGG | - | chr4_3:15237538-15237557 | Msa0631840:intron | 35.0% |
| TTGATTGCATTTGTCTCGTA+TGG | - | chr4_3:15237602-15237621 | Msa0631840:intron | 35.0% | |
| ! | CACTACAGATCTGTATTGAT+TGG | + | chr4_3:15237681-15237700 | None:intergenic | 35.0% |
| AATTGACTAAAAAGAGTGGC+AGG | + | chr4_3:15237800-15237819 | None:intergenic | 35.0% | |
| CTAGTAAAAACAAGTGGCAT+AGG | + | chr4_3:15237917-15237936 | None:intergenic | 35.0% | |
| CCTACATGGTTATCAAATCA+AGG | + | chr4_3:15238031-15238050 | None:intergenic | 35.0% | |
| ! | CCTTGATTTGATAACCATGT+AGG | - | chr4_3:15238028-15238047 | Msa0631840:intron | 35.0% |
| TAACCATGTAGGGAAATATC+AGG | - | chr4_3:15238039-15238058 | Msa0631840:intron | 35.0% | |
| GAATCGGTTATTGTGAGATT+TGG | - | chr4_3:15238175-15238194 | Msa0631840:intron | 35.0% | |
| !! | CTTCATCTTGTTGATTTGAC+AGG | - | chr4_3:15238207-15238226 | Msa0631840:intron | 35.0% |
| TTGACAGGCACTAAATTATG+AGG | - | chr4_3:15238222-15238241 | Msa0631840:intron | 35.0% | |
| CAGATAAGCACTAATGACTT+TGG | + | chr4_3:15238417-15238436 | None:intergenic | 35.0% | |
| AGACTTCAATGAGTGATTTC+AGG | - | chr4_3:15238489-15238508 | Msa0631840:intron | 35.0% | |
| GGAAAGATTGTATGATCAAG+AGG | + | chr4_3:15238651-15238670 | None:intergenic | 35.0% | |
| ATACTATTCTTGTGGCATTC+TGG | - | chr4_3:15238694-15238713 | Msa0631840:five_prime_UTR | 35.0% | |
| TTAGGAACATTGGATCTACG+TGG | + | chr4_3:15233114-15233133 | None:intergenic | 40.0% | |
| TCTGGATTATGTCAGTGAAG+AGG | + | chr4_3:15233158-15233177 | None:intergenic | 40.0% | |
| !! | CATTTTAGTCCACTCGATGT+GGG | + | chr4_3:15233701-15233720 | None:intergenic | 40.0% |
| ! | GTGGACTAAAATGCTTGATG+TGG | - | chr4_3:15233708-15233727 | Msa0631840:intron | 40.0% |
| GATGTGGTACTTAAACCATG+AGG | - | chr4_3:15233724-15233743 | Msa0631840:intron | 40.0% | |
| ! | CAAAAGACTAGTCCATTAGG+TGG | + | chr4_3:15233755-15233774 | None:intergenic | 40.0% |
| !!! | CACCTAATGGACTAGTCTTT+TGG | - | chr4_3:15233753-15233772 | Msa0631840:intron | 40.0% |
| ! | ACCCAAAAGACTAGTCCATT+AGG | + | chr4_3:15233758-15233777 | None:intergenic | 40.0% |
| !!! | AATGGACTAGTCTTTTGGGT+TGG | - | chr4_3:15233758-15233777 | Msa0631840:intron | 40.0% |
| !!! | ATGGACTAGTCTTTTGGGTT+GGG | - | chr4_3:15233759-15233778 | Msa0631840:intron | 40.0% |
| CTTAGAAGAATGTAGACAGC+TGG | - | chr4_3:15233843-15233862 | Msa0631840:intron | 40.0% | |
| ACATAATCTGGATGGTCTAG+TGG | + | chr4_3:15233875-15233894 | None:intergenic | 40.0% | |
| ! | GATAAAGTTAGTGTGTTGGC+TGG | - | chr4_3:15234233-15234252 | Msa0631840:intron | 40.0% |
| GAAGAATTCGATACGTGTAG+GGG | + | chr4_3:15234576-15234595 | None:intergenic | 40.0% | |
| ACATAATTCGCAATTCGCGT+CGG | + | chr4_3:15234631-15234650 | None:intergenic | 40.0% | |
| AAAACATCTGTGATGCTCCT+TGG | + | chr4_3:15234690-15234709 | None:intergenic | 40.0% | |
| ! | TGACACTTGTCTAAAGTGTC+TGG | - | chr4_3:15234717-15234736 | Msa0631840:intron | 40.0% |
| ACTTGCTTAGAGAATGTTGG+GGG | - | chr4_3:15234798-15234817 | Msa0631840:intron | 40.0% | |
| CCAAACCTCTGGCAATATAT+TGG | + | chr4_3:15235183-15235202 | None:intergenic | 40.0% | |
| CCAATATATTGCCAGAGGTT+TGG | - | chr4_3:15235180-15235199 | Msa0631840:intron | 40.0% | |
| TTCTGATCTAACCAAACCTC+TGG | + | chr4_3:15235194-15235213 | None:intergenic | 40.0% | |
| AGCATTGTTCCTGCAATTCA+AGG | - | chr4_3:15235277-15235296 | Msa0631840:intron | 40.0% | |
| CAAACCCAGGTTTCATTTGT+GGG | + | chr4_3:15235336-15235355 | None:intergenic | 40.0% | |
| TCAAACCCAGGTTTCATTTG+TGG | + | chr4_3:15235337-15235356 | None:intergenic | 40.0% | |
| AATAGCATTAGCACCTGTTC+AGG | + | chr4_3:15235409-15235428 | None:intergenic | 40.0% | |
| TTCCACCTTGCTAGCAATTT+AGG | - | chr4_3:15236017-15236036 | Msa0631840:intron | 40.0% | |
| TTCCTAAATTGCTAGCAAGG+TGG | + | chr4_3:15236022-15236041 | None:intergenic | 40.0% | |
| AGCAATTTAGGAAGTAAGCG+GGG | - | chr4_3:15236029-15236048 | Msa0631840:intron | 40.0% | |
| AGTGAGTAATGACCTTGGTT+AGG | + | chr4_3:15236100-15236119 | None:intergenic | 40.0% | |
| GCATTAGTGAGTAATGACCT+TGG | + | chr4_3:15236105-15236124 | None:intergenic | 40.0% | |
| AGGAGTGAAGCATATTGTGT+TGG | - | chr4_3:15236170-15236189 | Msa0631840:intron | 40.0% | |
| ! | GTGAAGCATATTGTGTTGGT+TGG | - | chr4_3:15236174-15236193 | Msa0631840:intron | 40.0% |
| !! | TATTGTGTTGGTTGGGTCTA+TGG | - | chr4_3:15236182-15236201 | Msa0631840:intron | 40.0% |
| !! | ATTGTGTTGGTTGGGTCTAT+GGG | - | chr4_3:15236183-15236202 | Msa0631840:intron | 40.0% |
| TTCCCAAACTGTTCAAAGGA+TGG | + | chr4_3:15236224-15236243 | None:intergenic | 40.0% | |
| CCATTTCCCAAACTGTTCAA+AGG | + | chr4_3:15236228-15236247 | None:intergenic | 40.0% | |
| CCTTTGAACAGTTTGGGAAA+TGG | - | chr4_3:15236225-15236244 | Msa0631840:intron | 40.0% | |
| GTGTTCCATACACGATCATA+AGG | - | chr4_3:15236478-15236497 | Msa0631840:CDS | 40.0% | |
| GTGTACCTTATGATCGTGTA+TGG | + | chr4_3:15236486-15236505 | None:intergenic | 40.0% | |
| ! | TGTTTTCACATTCCCAAACC+TGG | - | chr4_3:15236558-15236577 | Msa0631840:CDS | 40.0% |
| !! | ATACCTGGTGTCATTATCTG+TGG | - | chr4_3:15236737-15236756 | Msa0631840:intron | 40.0% |
| TTTCCACAGATAATGACACC+AGG | + | chr4_3:15236743-15236762 | None:intergenic | 40.0% | |
| GCAACACTACAGTACTATAG+CGG | + | chr4_3:15236944-15236963 | None:intergenic | 40.0% | |
| GCTATAGTACTGTAGTGTTG+CGG | - | chr4_3:15236943-15236962 | Msa0631840:intron | 40.0% | |
| TTGTCGATCACGGAAAATAG+TGG | + | chr4_3:15236981-15237000 | None:intergenic | 40.0% | |
| TCTGCTCATGAATCTCATCT+TGG | - | chr4_3:15237710-15237729 | Msa0631840:intron | 40.0% | |
| GTTCCTGATATTTCCCTACA+TGG | + | chr4_3:15238045-15238064 | None:intergenic | 40.0% | |
| TGAACCAACAAAGGACTTCA+AGG | - | chr4_3:15238294-15238313 | Msa0631840:intron | 40.0% | |
| AAAGCCTTGAAGTCCTTTGT+TGG | + | chr4_3:15238301-15238320 | None:intergenic | 40.0% | |
| GATCAAGAGGCAAAAACTCT+AGG | + | chr4_3:15238638-15238657 | None:intergenic | 40.0% | |
| CAAACCACTGTCCTTGTTAC+CGG | - | chr4_3:15233290-15233309 | Msa0631840:three_prime_UTR | 45.0% | |
| !! | GCATTTTAGTCCACTCGATG+TGG | + | chr4_3:15233702-15233721 | None:intergenic | 45.0% |
| ! | ATCTGGATGGTCTAGTGGAT+TGG | + | chr4_3:15233870-15233889 | None:intergenic | 45.0% |
| ! | ACATAATTCGCTGGGTTGAG+TGG | - | chr4_3:15233950-15233969 | Msa0631840:intron | 45.0% |
| !! | TACTCTTGGTTCGCGAGTTT+TGG | + | chr4_3:15234054-15234073 | None:intergenic | 45.0% |
| CTAGTTTCTACGGGTACTCT+TGG | + | chr4_3:15234068-15234087 | None:intergenic | 45.0% | |
| AGAACGATGTTGTAGCCTGA+AGG | - | chr4_3:15234122-15234141 | Msa0631840:intron | 45.0% | |
| TTAGAAGAACGCGAGCAAGA+GGG | - | chr4_3:15234145-15234164 | Msa0631840:intron | 45.0% | |
| TCAGTTGAAGAAACTGGGAC+TGG | - | chr4_3:15234175-15234194 | Msa0631840:intron | 45.0% | |
| TATAGAGCTTCGGTACGCTT+CGG | + | chr4_3:15234553-15234572 | None:intergenic | 45.0% | |
| AGTGTCTGGCACATGTCTTA+CGG | - | chr4_3:15234731-15234750 | Msa0631840:intron | 45.0% | |
| GCATCTGTACCTTGAATTGC+AGG | + | chr4_3:15235289-15235308 | None:intergenic | 45.0% | |
| CTGTCCCACAAATGAAACCT+GGG | - | chr4_3:15235329-15235348 | Msa0631840:intron | 45.0% | |
| TTGATCCAACCAAAGGTGGA+AGG | - | chr4_3:15235353-15235372 | Msa0631840:intron | 45.0% | |
| ! | TGATGGTGCATATCCTGAAC+AGG | - | chr4_3:15235393-15235412 | Msa0631840:CDS | 45.0% |
| CAAACGCCGCATATGAGTAA+TGG | + | chr4_3:15235574-15235593 | None:intergenic | 45.0% | |
| CATTACTCATATGCGGCGTT+TGG | - | chr4_3:15235572-15235591 | Msa0631840:intron | 45.0% | |
| TAAAGGGAAGACGGAAAGCA+AGG | + | chr4_3:15235973-15235992 | None:intergenic | 45.0% | |
| CGTGTATGGAACACCAGAAT+TGG | + | chr4_3:15236472-15236491 | None:intergenic | 45.0% | |
| ! | TTTTGACCTGTGCAATGCAC+AGG | + | chr4_3:15236596-15236615 | None:intergenic | 45.0% |
| CAGGTCTGAATCAACAAGGA+AGG | + | chr4_3:15237262-15237281 | None:intergenic | 45.0% | |
| !! | CTTCCTTGTTGATTCAGACC+TGG | - | chr4_3:15237260-15237279 | Msa0631840:intron | 45.0% |
| TCTTTATCAAGCAAGCCACC+AGG | + | chr4_3:15237281-15237300 | None:intergenic | 45.0% | |
| !! | GGTGGCTTGCTTGATAAAGA+AGG | - | chr4_3:15237281-15237300 | Msa0631840:intron | 45.0% |
| ! | GGCTTGCTTGATAAAGAAGG+AGG | - | chr4_3:15237284-15237303 | Msa0631840:intron | 45.0% |
| !! | GATAAAGAAGGAGGTGTTCG+AGG | - | chr4_3:15237293-15237312 | Msa0631840:intron | 45.0% |
| GTGTTCGAGGACTCATTGTA+GGG | - | chr4_3:15237306-15237325 | Msa0631840:intron | 45.0% | |
| !! | TGCTACATCAGCTCTAGGTA+TGG | + | chr4_3:15237366-15237385 | None:intergenic | 45.0% |
| ACTTCTGCTACATCAGCTCT+AGG | + | chr4_3:15237371-15237390 | None:intergenic | 45.0% | |
| TGTAGCAGAAGTCTGTGTTC+AGG | - | chr4_3:15237379-15237398 | Msa0631840:intron | 45.0% | |
| GGCAGGACACGTTAAAGTTT+AGG | + | chr4_3:15237783-15237802 | None:intergenic | 45.0% | |
| TGACCTAGCATCAAAACCTG+AGG | - | chr4_3:15238264-15238283 | Msa0631840:intron | 45.0% | |
| GACCTAGCATCAAAACCTGA+GGG | - | chr4_3:15238265-15238284 | Msa0631840:intron | 45.0% | |
| !!! | AGTCTTTTGGGTTGGGCTGT+TGG | - | chr4_3:15233766-15233785 | Msa0631840:intron | 50.0% |
| CTTCACGAATCTGAGCGAAC+CGG | + | chr4_3:15234024-15234043 | None:intergenic | 50.0% | |
| ! | TCTCGCGACGCTAGTTTCTA+CGG | + | chr4_3:15234078-15234097 | None:intergenic | 50.0% |
| AAACTAGCGTCGCGAGAGTA+AGG | - | chr4_3:15234081-15234100 | Msa0631840:intron | 50.0% | |
| AACTAGCGTCGCGAGAGTAA+GGG | - | chr4_3:15234082-15234101 | Msa0631840:intron | 50.0% | |
| CTCGCGTTCTTCTAACCTTC+AGG | + | chr4_3:15234140-15234159 | None:intergenic | 50.0% | |
| GTTAGAAGAACGCGAGCAAG+AGG | - | chr4_3:15234144-15234163 | Msa0631840:intron | 50.0% | |
| ! | GAAGAAACTGGGACTGGTAG+CGG | - | chr4_3:15234181-15234200 | Msa0631840:intron | 50.0% |
| ! | CGTGTAGGGGTATAGAGCTT+CGG | + | chr4_3:15234563-15234582 | None:intergenic | 50.0% |
| TCTCATGATAGCTGTGTCCG+AGG | - | chr4_3:15234659-15234678 | Msa0631840:intron | 50.0% | |
| GTGTCTGGCACATGTCTTAC+GGG | - | chr4_3:15234732-15234751 | Msa0631840:intron | 50.0% | |
| CGCGACCAATATATTGCCAG+AGG | - | chr4_3:15235175-15235194 | Msa0631840:intron | 50.0% | |
| GCTGTCCCACAAATGAAACC+TGG | - | chr4_3:15235328-15235347 | Msa0631840:intron | 50.0% | |
| CCTTTGGTTGGATCAAACCC+AGG | + | chr4_3:15235349-15235368 | None:intergenic | 50.0% | |
| CCTGGGTTTGATCCAACCAA+AGG | - | chr4_3:15235346-15235365 | Msa0631840:intron | 50.0% | |
| GGGTTTGATCCAACCAAAGG+TGG | - | chr4_3:15235349-15235368 | Msa0631840:intron | 50.0% | |
| AAACTCAGGCCTTCCACCTT+TGG | + | chr4_3:15235365-15235384 | None:intergenic | 50.0% | |
| CTTGGATTCTCACCCCCATT+TGG | - | chr4_3:15235713-15235732 | Msa0631840:intron | 50.0% | |
| TAGGTGGTCTGTCCAGGTTT+GGG | + | chr4_3:15236573-15236592 | None:intergenic | 50.0% | |
| CCACCAGGTCTGAATCAACA+AGG | + | chr4_3:15237266-15237285 | None:intergenic | 50.0% | |
| !! | CCTTGTTGATTCAGACCTGG+TGG | - | chr4_3:15237263-15237282 | Msa0631840:intron | 50.0% |
| GGTGTTCGAGGACTCATTGT+AGG | - | chr4_3:15237305-15237324 | Msa0631840:intron | 50.0% | |
| TCGAGGACTCATTGTAGGGA+AGG | - | chr4_3:15237310-15237329 | Msa0631840:intron | 50.0% | |
| !! | CACCCTCAGGTTTTGATGCT+AGG | + | chr4_3:15238270-15238289 | None:intergenic | 50.0% |
| !! | AGCACCGGTAACAAGGACAG+TGG | + | chr4_3:15233297-15233316 | None:intergenic | 55.0% |
| ACTGTCCTTGTTACCGGTGC+TGG | - | chr4_3:15233296-15233315 | Msa0631840:three_prime_UTR | 55.0% | |
| GTTAGGAGTCCCACATCGAG+TGG | - | chr4_3:15233689-15233708 | Msa0631840:intron | 55.0% | |
| CATTAGGTGGGAGAGCCTCA+TGG | + | chr4_3:15233742-15233761 | None:intergenic | 55.0% | |
| CATGAGGCTCTCCCACCTAA+TGG | - | chr4_3:15233740-15233759 | Msa0631840:intron | 55.0% | |
| TTGAGTGGCGAACCGCGAAT+TGG | - | chr4_3:15233965-15233984 | Msa0631840:intron | 55.0% | |
| GGTTCGCACGAACCAATTCG+CGG | + | chr4_3:15233980-15233999 | None:intergenic | 55.0% | |
| TGCGCGAAAGAACCGCGAAT+CGG | + | chr4_3:15234001-15234020 | None:intergenic | 55.0% | |
| ! | CTCGCGACGCTAGTTTCTAC+GGG | + | chr4_3:15234077-15234096 | None:intergenic | 55.0% |
| ACTAGCGTCGCGAGAGTAAG+GGG | - | chr4_3:15234083-15234102 | Msa0631840:intron | 55.0% | |
| !! | TGTGTTGGCTGGGCTCTTGT+TGG | - | chr4_3:15234244-15234263 | Msa0631840:intron | 55.0% |
| GATGCTCCTTGGACTCTCCT+CGG | + | chr4_3:15234679-15234698 | None:intergenic | 55.0% | |
| GGCACATGTCTTACGGGTGT+TGG | - | chr4_3:15234738-15234757 | Msa0631840:intron | 55.0% | |
| TCAGGCCTTCCACCTTTGGT+TGG | + | chr4_3:15235361-15235380 | None:intergenic | 55.0% | |
| GGGAAGACGGAAAGCAAGGT+AGG | + | chr4_3:15235969-15235988 | None:intergenic | 55.0% | |
| CCTGCAGCCTTAGCTGTTCA+TGG | + | chr4_3:15236153-15236172 | None:intergenic | 55.0% | |
| CCATGAACAGCTAAGGCTGC+AGG | - | chr4_3:15236150-15236169 | Msa0631840:intron | 55.0% | |
| !! | GTGTTGGTTGGGTCTATGGG+TGG | - | chr4_3:15236186-15236205 | Msa0631840:intron | 55.0% |
| GTAGGTGGTCTGTCCAGGTT+TGG | + | chr4_3:15236574-15236593 | None:intergenic | 55.0% | |
| CTGTGCAATGCACAGGTAGG+TGG | + | chr4_3:15236589-15236608 | None:intergenic | 55.0% | |
| CACCTACCTGTGCATTGCAC+AGG | - | chr4_3:15236587-15236606 | Msa0631840:CDS | 55.0% | |
| GACCTGTGCAATGCACAGGT+AGG | + | chr4_3:15236592-15236611 | None:intergenic | 55.0% | |
| ! | GCATCAAAACCTGAGGGTGC+AGG | - | chr4_3:15238271-15238290 | Msa0631840:intron | 55.0% |
| GGGTGCAGGTGAACCAACAA+AGG | - | chr4_3:15238285-15238304 | Msa0631840:intron | 55.0% | |
| ! | GTCCTTGTTACCGGTGCTGG+TGG | - | chr4_3:15233299-15233318 | Msa0631840:three_prime_UTR | 60.0% |
| !! | GACCACCAGCACCGGTAACA+AGG | + | chr4_3:15233304-15233323 | None:intergenic | 60.0% |
| ACCTGTTCGACCACCAGCAC+CGG | + | chr4_3:15233312-15233331 | None:intergenic | 60.0% | |
| !! | GGTTCGTGCGAACCGATTCG+CGG | - | chr4_3:15233986-15234005 | Msa0631840:intron | 60.0% |
| TTCGCGGTTCTTTCGCGCAC+CGG | - | chr4_3:15234002-15234021 | Msa0631840:intron | 60.0% | |
| CTAGCGTCGCGAGAGTAAGG+GGG | - | chr4_3:15234084-15234103 | Msa0631840:intron | 60.0% | |
| TGGCTGGGCTCTTGTTGGAC+TGG | - | chr4_3:15234249-15234268 | Msa0631840:intron | 60.0% | |
| ! | ATTCGCGTCGGTACGCGGTA+CGG | + | chr4_3:15234619-15234638 | None:intergenic | 60.0% |
| ! | TCGCAATTCGCGTCGGTACG+CGG | + | chr4_3:15234624-15234643 | None:intergenic | 60.0% |
| CTGTGTCCGAGGAGAGTCCA+AGG | - | chr4_3:15234670-15234689 | Msa0631840:intron | 60.0% | |
| CACAGGTAGGTGGTCTGTCC+AGG | + | chr4_3:15236579-15236598 | None:intergenic | 60.0% | |
| ! | GTTGGTTCACCTGCACCCTC+AGG | + | chr4_3:15238283-15238302 | None:intergenic | 60.0% |
| !! | ACCGGTGCTGGTGGTCGAAC+AGG | - | chr4_3:15233308-15233327 | Msa0631840:three_prime_UTR | 65.0% |
| !! | TGGTAGCGGCTGCTGCTGTC+TGG | - | chr4_3:15234195-15234214 | Msa0631840:intron | 65.0% |
| TAGCGGCTGCTGCTGTCTGG+AGG | - | chr4_3:15234198-15234217 | Msa0631840:intron | 65.0% | |
| ! | TTCGCGTCGGTACGCGGTAC+GGG | + | chr4_3:15234618-15234637 | None:intergenic | 65.0% |
| CGGTACGGGTTCGCGGTACG+CGG | + | chr4_3:15234604-15234623 | None:intergenic | 70.0% | |
| CGGTACGCGGTACGGGTTCG+CGG | + | chr4_3:15234611-15234630 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 15233083 | 15238776 | 15233083 | ID=Msa0631840;Name=Msa0631840 |
| chr4_3 | mRNA | 15233083 | 15238776 | 15233083 | ID=Msa0631840-mRNA-1;Parent=Msa0631840;Name=Msa0631840-mRNA-1;_AED=0.02;_eAED=0.02;_QI=192|1|1|1|1|1|7|428|255 |
| chr4_3 | exon | 15233083 | 15233630 | 15233083 | ID=Msa0631840-mRNA-1:exon:4314;Parent=Msa0631840-mRNA-1 |
| chr4_3 | exon | 15234459 | 15234582 | 15234459 | ID=Msa0631840-mRNA-1:exon:4313;Parent=Msa0631840-mRNA-1 |
| chr4_3 | exon | 15235360 | 15235421 | 15235360 | ID=Msa0631840-mRNA-1:exon:4312;Parent=Msa0631840-mRNA-1 |
| chr4_3 | exon | 15235602 | 15235699 | 15235602 | ID=Msa0631840-mRNA-1:exon:4311;Parent=Msa0631840-mRNA-1 |
| chr4_3 | exon | 15236310 | 15236346 | 15236310 | ID=Msa0631840-mRNA-1:exon:4310;Parent=Msa0631840-mRNA-1 |
| chr4_3 | exon | 15236445 | 15236716 | 15236445 | ID=Msa0631840-mRNA-1:exon:4309;Parent=Msa0631840-mRNA-1 |
| chr4_3 | exon | 15238530 | 15238776 | 15238530 | ID=Msa0631840-mRNA-1:exon:4308;Parent=Msa0631840-mRNA-1 |
| chr4_3 | five_prime_UTR | 15238585 | 15238776 | 15238585 | ID=Msa0631840-mRNA-1:five_prime_utr;Parent=Msa0631840-mRNA-1 |
| chr4_3 | CDS | 15238530 | 15238584 | 15238530 | ID=Msa0631840-mRNA-1:cds;Parent=Msa0631840-mRNA-1 |
| chr4_3 | CDS | 15236445 | 15236716 | 15236445 | ID=Msa0631840-mRNA-1:cds;Parent=Msa0631840-mRNA-1 |
| chr4_3 | CDS | 15236310 | 15236346 | 15236310 | ID=Msa0631840-mRNA-1:cds;Parent=Msa0631840-mRNA-1 |
| chr4_3 | CDS | 15235602 | 15235699 | 15235602 | ID=Msa0631840-mRNA-1:cds;Parent=Msa0631840-mRNA-1 |
| chr4_3 | CDS | 15235360 | 15235421 | 15235360 | ID=Msa0631840-mRNA-1:cds;Parent=Msa0631840-mRNA-1 |
| chr4_3 | CDS | 15234459 | 15234582 | 15234459 | ID=Msa0631840-mRNA-1:cds;Parent=Msa0631840-mRNA-1 |
| chr4_3 | CDS | 15233511 | 15233630 | 15233511 | ID=Msa0631840-mRNA-1:cds;Parent=Msa0631840-mRNA-1 |
| chr4_3 | three_prime_UTR | 15233083 | 15233510 | 15233083 | ID=Msa0631840-mRNA-1:three_prime_utr;Parent=Msa0631840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
