Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002930 | Msa0022640 | 0.841314 | 5.122446e-58 | -8.615850e-47 |
| Msa0016120 | Msa0022640 | 0.818971 | 1.483523e-52 | -8.615850e-47 |
| Msa0020630 | Msa0022640 | 0.820913 | 5.336006e-53 | -8.615850e-47 |
| Msa0022640 | Msa0032500 | 0.802076 | 6.660885e-49 | -8.615850e-47 |
| Msa0022640 | Msa0036430 | 0.813880 | 2.045568e-51 | -8.615850e-47 |
| Msa0022640 | Msa0053110 | 0.804119 | 2.517418e-49 | -8.615850e-47 |
| Msa0022640 | Msa0078430 | 0.804727 | 1.879779e-49 | -8.615850e-47 |
| Msa0022640 | Msa0079770 | 0.811380 | 7.205754e-51 | -8.615850e-47 |
| Msa0022640 | Msa0084500 | 0.814760 | 1.307217e-51 | -8.615850e-47 |
| Msa0022640 | Msa0094100 | 0.803607 | 3.216362e-49 | -8.615850e-47 |
| Msa0022640 | Msa0098440 | 0.818610 | 1.791824e-52 | -8.615850e-47 |
| Msa0022640 | Msa0103000 | 0.811255 | 7.673103e-51 | -8.615850e-47 |
| Msa0022640 | Msa0106790 | 0.852753 | 3.753188e-61 | -8.615850e-47 |
| Msa0022640 | Msa0118380 | 0.854870 | 9.226570e-62 | -8.615850e-47 |
| Msa0022640 | Msa0118400 | 0.881132 | 3.092908e-70 | -8.615850e-47 |
| Msa0022640 | Msa0127440 | 0.810794 | 9.656083e-51 | -8.615850e-47 |
| Msa0022640 | Msa0130570 | 0.829376 | 5.329936e-55 | -8.615850e-47 |
| Msa0022640 | Msa0134040 | 0.822329 | 2.511186e-53 | -8.615850e-47 |
| Msa0022640 | Msa0141600 | 0.832683 | 8.217479e-56 | -8.615850e-47 |
| Msa0022640 | Msa0147560 | 0.837882 | 3.997695e-57 | -8.615850e-47 |
| Msa0022640 | Msa0149500 | 0.809795 | 1.586182e-50 | -8.615850e-47 |
| Msa0022640 | Msa0153420 | 0.848610 | 5.491255e-60 | -8.615850e-47 |
| Msa0022640 | Msa0153430 | 0.802709 | 4.932935e-49 | -8.615850e-47 |
| Msa0022640 | Msa0155110 | 0.801475 | 8.849271e-49 | -8.615850e-47 |
| Msa0022640 | Msa0159750 | 0.822164 | 2.742619e-53 | -8.615850e-47 |
| Msa0022640 | Msa0161100 | 0.809500 | 1.835139e-50 | -8.615850e-47 |
| Msa0022640 | Msa0161680 | 0.998235 | 1.682003e-259 | -8.615850e-47 |
| Msa0022640 | Msa0164660 | 0.812978 | 3.229501e-51 | -8.615850e-47 |
| Msa0022640 | Msa0170580 | 0.811160 | 8.044772e-51 | -8.615850e-47 |
| Msa0022640 | Msa0173090 | 0.800892 | 1.164718e-48 | -8.615850e-47 |
| Msa0022640 | Msa0176470 | 0.816832 | 4.511462e-52 | -8.615850e-47 |
| Msa0022640 | Msa0181090 | 0.828243 | 1.001664e-54 | -8.615850e-47 |
| Msa0022640 | Msa0183610 | 0.807994 | 3.850618e-50 | -8.615850e-47 |
| Msa0022640 | Msa0193760 | 0.801893 | 7.262112e-49 | -8.615850e-47 |
| Msa0022640 | Msa0199730 | 0.825879 | 3.685067e-54 | -8.615850e-47 |
| Msa0022640 | Msa0203030 | 0.841001 | 6.190212e-58 | -8.615850e-47 |
| Msa0022640 | Msa0208630 | 0.809514 | 1.821957e-50 | -8.615850e-47 |
| Msa0022640 | Msa0213080 | 0.821972 | 3.038992e-53 | -8.615850e-47 |
| Msa0022640 | Msa0219190 | 0.840537 | 8.192227e-58 | -8.615850e-47 |
| Msa0022640 | Msa0219310 | 0.801455 | 8.932075e-49 | -8.615850e-47 |
| Msa0022640 | Msa0220300 | 0.803789 | 2.948156e-49 | -8.615850e-47 |
| Msa0022640 | Msa0235550 | 0.809243 | 2.083727e-50 | -8.615850e-47 |
| Msa0022640 | Msa0251240 | 0.820691 | 5.999832e-53 | -8.615850e-47 |
| Msa0022640 | Msa0257680 | 0.806424 | 8.282705e-50 | -8.615850e-47 |
| Msa0022640 | Msa0260970 | 0.821101 | 4.828024e-53 | -8.615850e-47 |
| Msa0022640 | Msa0274520 | 0.809079 | 2.259237e-50 | -8.615850e-47 |
| Msa0022640 | Msa0280490 | 0.804305 | 2.302363e-49 | -8.615850e-47 |
| Msa0022640 | Msa0288200 | 0.802875 | 4.558587e-49 | -8.615850e-47 |
| Msa0022640 | Msa0298240 | 0.819480 | 1.136252e-52 | -8.615850e-47 |
| Msa0022640 | Msa0300620 | 0.805787 | 1.127981e-49 | -8.615850e-47 |
| Msa0022640 | Msa0301980 | 0.810517 | 1.108147e-50 | -8.615850e-47 |
| Msa0022640 | Msa0318270 | 0.805009 | 1.641630e-49 | -8.615850e-47 |
| Msa0022640 | Msa0318310 | 0.801994 | 6.922140e-49 | -8.615850e-47 |
| Msa0022640 | Msa0322830 | 0.837810 | 4.173131e-57 | -8.615850e-47 |
| Msa0022640 | Msa0322840 | 0.826040 | 3.374624e-54 | -8.615850e-47 |
| Msa0022640 | Msa0323610 | 0.808844 | 2.536192e-50 | -8.615850e-47 |
| Msa0022640 | Msa0329620 | 0.815930 | 7.183730e-52 | -8.615850e-47 |
| Msa0022640 | Msa0329710 | 0.803411 | 3.531460e-49 | -8.615850e-47 |
| Msa0022640 | Msa0335270 | 0.809569 | 1.773673e-50 | -8.615850e-47 |
| Msa0022640 | Msa0352000 | 0.826217 | 3.061613e-54 | -8.615850e-47 |
| Msa0022640 | Msa0352010 | 0.826597 | 2.485604e-54 | -8.615850e-47 |
| Msa0022640 | Msa0362780 | 0.805729 | 1.159648e-49 | -8.615850e-47 |
| Msa0022640 | Msa0370600 | 0.812137 | 4.932310e-51 | -8.615850e-47 |
| Msa0022640 | Msa0371540 | 0.839051 | 1.997058e-57 | -8.615850e-47 |
| Msa0022640 | Msa0371570 | 0.849262 | 3.619998e-60 | -8.615850e-47 |
| Msa0022640 | Msa0378500 | 0.825927 | 3.588502e-54 | -8.615850e-47 |
| Msa0022640 | Msa0408630 | 0.811377 | 7.218718e-51 | -8.615850e-47 |
| Msa0022640 | Msa0413740 | 0.805750 | 1.148175e-49 | -8.615850e-47 |
| Msa0022640 | Msa0413930 | 0.815141 | 1.076226e-51 | -8.615850e-47 |
| Msa0022640 | Msa0418000 | 0.819237 | 1.290313e-52 | -8.615850e-47 |
| Msa0022640 | Msa0418200 | 0.820403 | 6.988289e-53 | -8.615850e-47 |
| Msa0022640 | Msa0419820 | 0.819980 | 8.735411e-53 | -8.615850e-47 |
| Msa0022640 | Msa0419970 | 0.838936 | 2.137735e-57 | -8.615850e-47 |
| Msa0022640 | Msa0419990 | 0.828339 | 9.496608e-55 | -8.615850e-47 |
| Msa0022640 | Msa0436460 | 0.840064 | 1.089113e-57 | -8.615850e-47 |
| Msa0022640 | Msa0436500 | 0.854440 | 1.229000e-61 | -8.615850e-47 |
| Msa0022640 | Msa0458790 | 0.803893 | 2.804316e-49 | -8.615850e-47 |
| Msa0022640 | Msa0464540 | 0.829231 | 5.780372e-55 | -8.615850e-47 |
| Msa0022640 | Msa0465930 | 0.831362 | 1.742507e-55 | -8.615850e-47 |
| Msa0022640 | Msa0465970 | 0.805729 | 1.159975e-49 | -8.615850e-47 |
| Msa0022640 | Msa0466050 | 0.812198 | 4.783910e-51 | -8.615850e-47 |
| Msa0022640 | Msa0466060 | 0.827241 | 1.744488e-54 | -8.615850e-47 |
| Msa0022640 | Msa0480980 | 0.806923 | 6.496345e-50 | -8.615850e-47 |
| Msa0022640 | Msa0503580 | 0.806708 | 7.213999e-50 | -8.615850e-47 |
| Msa0022640 | Msa0505390 | 0.802118 | 6.527565e-49 | -8.615850e-47 |
| Msa0022640 | Msa0517330 | 0.819736 | 9.930473e-53 | -8.615850e-47 |
| Msa0022640 | Msa0517340 | 0.839192 | 1.835849e-57 | -8.615850e-47 |
| Msa0022640 | Msa0520510 | 0.812853 | 3.439337e-51 | -8.615850e-47 |
| Msa0022640 | Msa0524050 | 0.810032 | 1.410102e-50 | -8.615850e-47 |
| Msa0022640 | Msa0531430 | 0.808098 | 3.659974e-50 | -8.615850e-47 |
| Msa0022640 | Msa0532300 | 0.832909 | 7.223235e-56 | -8.615850e-47 |
| Msa0022640 | Msa0532330 | 0.808130 | 3.602314e-50 | -8.615850e-47 |
| Msa0022640 | Msa0533070 | 0.806578 | 7.686191e-50 | -8.615850e-47 |
| Msa0022640 | Msa0534590 | 0.807154 | 5.806423e-50 | -8.615850e-47 |
| Msa0022640 | Msa0575250 | 0.815706 | 8.056204e-52 | -8.615850e-47 |
| Msa0022640 | Msa0581760 | 0.808656 | 2.782674e-50 | -8.615850e-47 |
| Msa0022640 | Msa0584130 | 0.831907 | 1.278752e-55 | -8.615850e-47 |
| Msa0022640 | Msa0607200 | 0.812443 | 4.228955e-51 | -8.615850e-47 |
| Msa0022640 | Msa0618290 | 0.811385 | 7.188120e-51 | -8.615850e-47 |
| Msa0022640 | Msa0619330 | 0.802221 | 6.218914e-49 | -8.615850e-47 |
| Msa0022640 | Msa0621890 | 0.803969 | 2.705027e-49 | -8.615850e-47 |
| Msa0022640 | Msa0625890 | 0.802341 | 5.875010e-49 | -8.615850e-47 |
| Msa0022640 | Msa0629370 | 0.817119 | 3.889868e-52 | -8.615850e-47 |
| Msa0022640 | Msa0631120 | 0.801602 | 8.333558e-49 | -8.615850e-47 |
| Msa0022640 | Msa0642180 | 0.803639 | 3.166860e-49 | -8.615850e-47 |
| Msa0022640 | Msa0649970 | 0.835210 | 1.915764e-56 | -8.615850e-47 |
| Msa0022640 | Msa0653020 | 0.814381 | 1.585622e-51 | -8.615850e-47 |
| Msa0022640 | Msa0663090 | 0.811842 | 5.719424e-51 | -8.615850e-47 |
| Msa0022640 | Msa0663680 | 0.811600 | 6.456288e-51 | -8.615850e-47 |
| Msa0022640 | Msa0680150 | 0.828815 | 7.288158e-55 | -8.615850e-47 |
| Msa0022640 | Msa0682530 | 0.839224 | 1.800804e-57 | -8.615850e-47 |
| Msa0022640 | Msa0691160 | 0.819157 | 1.345659e-52 | -8.615850e-47 |
| Msa0022640 | Msa0701770 | 0.804433 | 2.165132e-49 | -8.615850e-47 |
| Msa0022640 | Msa0708640 | 0.813893 | 2.032158e-51 | -8.615850e-47 |
| Msa0022640 | Msa0715310 | 0.802568 | 5.275136e-49 | -8.615850e-47 |
| Msa0022640 | Msa0716450 | 0.809838 | 1.552378e-50 | -8.615850e-47 |
| Msa0022640 | Msa0716760 | 0.802550 | 5.320205e-49 | -8.615850e-47 |
| Msa0022640 | Msa0717260 | 0.813974 | 1.950626e-51 | -8.615850e-47 |
| Msa0022640 | Msa0717670 | 0.808054 | 3.739372e-50 | -8.615850e-47 |
| Msa0022640 | Msa0734660 | 0.811827 | 5.762499e-51 | -8.615850e-47 |
| Msa0022640 | Msa0754030 | 0.807495 | 4.915992e-50 | -8.615850e-47 |
| Msa0022640 | Msa0760890 | 0.825167 | 5.432506e-54 | -8.615850e-47 |
| Msa0022640 | Msa0773610 | 0.850184 | 2.001193e-60 | -8.615850e-47 |
| Msa0022640 | Msa0776220 | 0.812186 | 4.811790e-51 | -8.615850e-47 |
| Msa0022640 | Msa0792510 | 0.820632 | 6.190166e-53 | -8.615850e-47 |
| Msa0022640 | Msa0807110 | 0.801040 | 1.085941e-48 | -8.615850e-47 |
| Msa0022640 | Msa0811000 | 0.815573 | 8.626507e-52 | -8.615850e-47 |
| Msa0022640 | Msa0813670 | 0.800817 | 1.206429e-48 | -8.615850e-47 |
| Msa0022640 | Msa0815320 | 0.806203 | 9.221326e-50 | -8.615850e-47 |
| Msa0022640 | Msa0823400 | 0.805952 | 1.040922e-49 | -8.615850e-47 |
| Msa0022640 | Msa0833040 | 0.810967 | 8.856357e-51 | -8.615850e-47 |
| Msa0022640 | Msa0843640 | 0.816474 | 5.427069e-52 | -8.615850e-47 |
| Msa0022640 | Msa0853540 | 0.837189 | 6.020018e-57 | -8.615850e-47 |
| Msa0022640 | Msa0862020 | 0.808345 | 3.241530e-50 | -8.615850e-47 |
| Msa0022640 | Msa0862100 | 0.806586 | 7.655866e-50 | -8.615850e-47 |
| Msa0022640 | Msa0870620 | 0.824828 | 6.532648e-54 | -8.615850e-47 |
| Msa0022640 | Msa0870690 | 0.810773 | 9.755028e-51 | -8.615850e-47 |
| Msa0022640 | Msa0873190 | 0.809654 | 1.700744e-50 | -8.615850e-47 |
| Msa0022640 | Msa0885060 | 0.854087 | 1.554369e-61 | -8.615850e-47 |
| Msa0022640 | Msa0886980 | 0.800203 | 1.609131e-48 | -8.615850e-47 |
| Msa0022640 | Msa0894890 | 0.800790 | 1.221818e-48 | -8.615850e-47 |
| Msa0022640 | Msa0896210 | 0.800991 | 1.111692e-48 | -8.615850e-47 |
| Msa0022640 | Msa0898370 | 0.808944 | 2.414180e-50 | -8.615850e-47 |
| Msa0022640 | Msa0903730 | 0.813782 | 2.150201e-51 | -8.615850e-47 |
| Msa0022640 | Msa0909710 | 0.804925 | 1.709281e-49 | -8.615850e-47 |
| Msa0022640 | Msa0937940 | 0.821548 | 3.807913e-53 | -8.615850e-47 |
| Msa0022640 | Msa0946320 | 0.817134 | 3.860277e-52 | -8.615850e-47 |
| Msa0022640 | Msa0951710 | 0.806269 | 8.929473e-50 | -8.615850e-47 |
| Msa0022640 | Msa0974750 | 0.800393 | 1.472272e-48 | -8.615850e-47 |
| Msa0022640 | Msa0981740 | 0.801928 | 7.142013e-49 | -8.615850e-47 |
| Msa0022640 | Msa0988480 | 0.816230 | 6.156818e-52 | -8.615850e-47 |
| Msa0022640 | Msa0999350 | 0.814244 | 1.700873e-51 | -8.615850e-47 |
| Msa0022640 | Msa0999360 | 0.827187 | 1.796709e-54 | -8.615850e-47 |
| Msa0022640 | Msa0999400 | 0.810064 | 1.388102e-50 | -8.615850e-47 |
| Msa0022640 | Msa0999410 | 0.811196 | 7.900585e-51 | -8.615850e-47 |
| Msa0022640 | Msa1002620 | 0.810926 | 9.041169e-51 | -8.615850e-47 |
| Msa0022640 | Msa1004210 | 0.831327 | 1.778043e-55 | -8.615850e-47 |
| Msa0022640 | Msa1009000 | 0.800829 | 1.199460e-48 | -8.615850e-47 |
| Msa0022640 | Msa1010110 | 0.825852 | 3.740169e-54 | -8.615850e-47 |
| Msa0022640 | Msa1014270 | 0.825740 | 3.975681e-54 | -8.615850e-47 |
| Msa0022640 | Msa1020720 | 0.853779 | 1.906534e-61 | -8.615850e-47 |
| Msa0022640 | Msa1021770 | 0.825481 | 4.579405e-54 | -8.615850e-47 |
| Msa0022640 | Msa1023400 | 0.807455 | 5.013996e-50 | -8.615850e-47 |
| Msa0022640 | Msa1027240 | 0.803093 | 4.108902e-49 | -8.615850e-47 |
| Msa0022640 | Msa1033560 | 0.814118 | 1.813077e-51 | -8.615850e-47 |
| Msa0022640 | Msa1034680 | 0.843493 | 1.354937e-58 | -8.615850e-47 |
| Msa0022640 | Msa1036390 | 0.812657 | 3.797343e-51 | -8.615850e-47 |
| Msa0022640 | Msa1046610 | 0.847028 | 1.498353e-59 | -8.615850e-47 |
| Msa0022640 | Msa1055260 | 0.811607 | 6.434466e-51 | -8.615850e-47 |
| Msa0022640 | Msa1055280 | 0.823452 | 1.374674e-53 | -8.615850e-47 |
| Msa0022640 | Msa1060580 | 0.825488 | 4.562060e-54 | -8.615850e-47 |
| Msa0022640 | Msa1073340 | 0.812349 | 4.432616e-51 | -8.615850e-47 |
| Msa0022640 | Msa1080460 | 0.802938 | 4.424217e-49 | -8.615850e-47 |
| Msa0022640 | Msa1098560 | 0.802052 | 6.736277e-49 | -8.615850e-47 |
| Msa0022640 | Msa1112870 | 0.804290 | 2.318591e-49 | -8.615850e-47 |
| Msa0022640 | Msa1113850 | 0.810594 | 1.066470e-50 | -8.615850e-47 |
| Msa0022640 | Msa1127140 | 0.800314 | 1.527168e-48 | -8.615850e-47 |
| Msa0022640 | Msa1139410 | 0.835594 | 1.532068e-56 | -8.615850e-47 |
| Msa0022640 | Msa1145020 | 0.809392 | 1.935516e-50 | -8.615850e-47 |
| Msa0022640 | Msa1154820 | 0.819517 | 1.113968e-52 | -8.615850e-47 |
| Msa0022640 | Msa1159360 | 0.811519 | 6.723063e-51 | -8.615850e-47 |
| Msa0022640 | Msa1176160 | 0.835426 | 1.689835e-56 | -8.615850e-47 |
| Msa0022640 | Msa1201990 | 0.817375 | 3.407498e-52 | -8.615850e-47 |
| Msa0022640 | Msa1221200 | -0.819232 | 1.294207e-52 | -8.615850e-47 |
| Msa0022640 | Msa1222970 | 0.813966 | 1.958893e-51 | -8.615850e-47 |
| Msa0022640 | Msa1223460 | 0.813790 | 2.141976e-51 | -8.615850e-47 |
| Msa0022640 | Msa1228190 | 0.810212 | 1.289512e-50 | -8.615850e-47 |
| Msa0022640 | Msa1228610 | 0.819097 | 1.388668e-52 | -8.615850e-47 |
| Msa0022640 | Msa1248040 | 0.818565 | 1.834478e-52 | -8.615850e-47 |
| Msa0022640 | Msa1262310 | 0.808105 | 3.647631e-50 | -8.615850e-47 |
| Msa0022640 | Msa1264020 | 0.804225 | 2.391978e-49 | -8.615850e-47 |
| Msa0022640 | Msa1265960 | 0.809419 | 1.910472e-50 | -8.615850e-47 |
| Msa0022640 | Msa1266960 | 0.800056 | 1.723301e-48 | -8.615850e-47 |
| Msa0022640 | Msa1271260 | 0.814453 | 1.528894e-51 | -8.615850e-47 |
| Msa0022640 | Msa1271280 | 0.807521 | 4.853300e-50 | -8.615850e-47 |
| Msa0022640 | Msa1277400 | 0.803238 | 3.835364e-49 | -8.615850e-47 |
| Msa0022640 | Msa1281720 | 0.812212 | 4.749264e-51 | -8.615850e-47 |
| Msa0022640 | Msa1292010 | 0.808083 | 3.687234e-50 | -8.615850e-47 |
| Msa0022640 | Msa1296800 | 0.807355 | 5.263315e-50 | -8.615850e-47 |
| Msa0022640 | Msa1305750 | 0.815067 | 1.117565e-51 | -8.615850e-47 |
| Msa0022640 | Msa1307190 | 0.829898 | 3.978912e-55 | -8.615850e-47 |
| Msa0022640 | Msa1321000 | 0.818488 | 1.909763e-52 | -8.615850e-47 |
| Msa0022640 | Msa1326000 | 0.801530 | 8.622908e-49 | -8.615850e-47 |
| Msa0022640 | Msa1329990 | 0.836307 | 1.010501e-56 | -8.615850e-47 |
| Msa0022640 | Msa1339440 | 0.803294 | 3.733619e-49 | -8.615850e-47 |
| Msa0022640 | Msa1347290 | 0.811219 | 7.810585e-51 | -8.615850e-47 |
| Msa0022640 | Msa1355400 | 0.816414 | 5.597462e-52 | -8.615850e-47 |
| Msa0022640 | Msa1358870 | -0.807257 | 5.521833e-50 | -8.615850e-47 |
| Msa0022640 | Msa1367080 | 0.808423 | 3.119965e-50 | -8.615850e-47 |
| Msa0022640 | Msa1373950 | 0.817554 | 3.105708e-52 | -8.615850e-47 |
| Msa0022640 | Msa1378760 | 0.806270 | 8.923255e-50 | -8.615850e-47 |
| Msa0022640 | Msa1379990 | 0.846625 | 1.930669e-59 | -8.615850e-47 |
| Msa0022640 | Msa1385620 | 0.807587 | 4.698590e-50 | -8.615850e-47 |
| Msa0022640 | Msa1408870 | 0.800735 | 1.253457e-48 | -8.615850e-47 |
| Msa0022640 | Msa1411070 | 0.844607 | 6.810076e-59 | -8.615850e-47 |
| Msa0022640 | Msa1420060 | 0.853193 | 2.809252e-61 | -8.615850e-47 |
| Msa0022640 | Msa1421550 | 0.806964 | 6.370028e-50 | -8.615850e-47 |
| Msa0022640 | Msa1423990 | 0.804565 | 2.031960e-49 | -8.615850e-47 |
| Msa0022640 | Msa1424690 | 0.836670 | 8.167684e-57 | -8.615850e-47 |
| Msa0022640 | Msa1429250 | 0.807496 | 4.913943e-50 | -8.615850e-47 |
| Msa0022640 | Msa1429420 | 0.806618 | 7.537647e-50 | -8.615850e-47 |
| Msa0022640 | Msa1435670 | 0.801044 | 1.084073e-48 | -8.615850e-47 |
| Msa0022640 | Msa1440220 | 0.828073 | 1.101028e-54 | -8.615850e-47 |
| Msa0022640 | Msa1442290 | 0.818052 | 2.397218e-52 | -8.615850e-47 |
| Msa0022640 | Msa1447440 | 0.801380 | 9.252859e-49 | -8.615850e-47 |
| Msa0022640 | Msa1453710 | 0.826679 | 2.377145e-54 | -8.615850e-47 |
| Msa0022640 | Msa1460380 | 0.801853 | 7.400960e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0022640 | MtrunA17_Chr1g0175821 | 46.316 | 190 | 92 | 1 | 6 | 185 | 26 | 215 | 4.46e-48 | 155 |
| Msa0022640 | MtrunA17_Chr1g0175811 | 40.724 | 221 | 81 | 6 | 1 | 186 | 1 | 206 | 1.33e-36 | 126 |
| Msa0022640 | MtrunA17_Chr1g0175791 | 44.571 | 175 | 64 | 4 | 8 | 155 | 67 | 235 | 1.34e-29 | 109 |
| Msa0022640 | MtrunA17_Chr5g0420601 | 33.333 | 201 | 96 | 5 | 21 | 186 | 85 | 282 | 2.11e-18 | 80.5 |
| Msa0022640 | MtrunA17_Chr1g0175781 | 30.769 | 208 | 95 | 5 | 21 | 186 | 90 | 290 | 4.85e-15 | 71.2 |
| Msa0022640 | MtrunA17_Chr1g0175751 | 28.846 | 208 | 99 | 5 | 21 | 186 | 119 | 319 | 9.46e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 31 sgRNAs with CRISPR-Local
Find 35 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAACTTGGTCAAGGTTTA+AGG | 0.142695 | 1_1:+42538426 | None:intergenic |
| CTTGTAAACAATTCCTTCTT+TGG | 0.221022 | 1_1:+42538568 | None:intergenic |
| CTTCGAAAAGAGTGGATTAA+TGG | 0.276341 | 1_1:-42538645 | Msa0022640:CDS |
| CTTGGTCAAGGTTTAAGGTT+AGG | 0.388940 | 1_1:+42538431 | None:intergenic |
| ATGGCTACTCTACATCAATC+TGG | 0.390287 | 1_1:-42538913 | Msa0022640:CDS |
| GCAAGCAACACCCGTTCAAT+TGG | 0.411385 | 1_1:-42538816 | Msa0022640:CDS |
| TGCTCGTTGTATGGAGCAAA+AGG | 0.418843 | 1_1:-42538786 | Msa0022640:CDS |
| GGAAAATTGCACACCAAAGA+AGG | 0.418990 | 1_1:-42538581 | Msa0022640:CDS |
| GGTCTCGATTGCTCGTTGTA+TGG | 0.434380 | 1_1:-42538795 | Msa0022640:CDS |
| CAATAAAATTGAAGAATTGA+AGG | 0.437348 | 1_1:-42538519 | Msa0022640:CDS |
| AGAAGGAATTGTTTACAAGT+TGG | 0.457133 | 1_1:-42538564 | Msa0022640:CDS |
| CTGAATCTGATAATAACATA+GGG | 0.473665 | 1_1:-42538697 | Msa0022640:CDS |
| AGGAATTGTTTACAAGTTGG+AGG | 0.487776 | 1_1:-42538561 | Msa0022640:CDS |
| AAAGGATCATGAGGCATATG+AGG | 0.490646 | 1_1:-42538870 | Msa0022640:CDS |
| ATTGTAGTTCAGCACAATGT+TGG | 0.502018 | 1_1:-42538491 | Msa0022640:CDS |
| TCTGAATCTGATAATAACAT+AGG | 0.504914 | 1_1:-42538698 | Msa0022640:CDS |
| GAGTGGATTAATGGAAAGAA+CGG | 0.524492 | 1_1:-42538636 | Msa0022640:CDS |
| GCACAATGTTGGCTTTAATG+AGG | 0.525326 | 1_1:-42538480 | Msa0022640:CDS |
| TCATGAGGCATATGAGGAGT+GGG | 0.527499 | 1_1:-42538864 | Msa0022640:CDS |
| GCAATCGAGACCAATTGAAC+GGG | 0.527802 | 1_1:+42538806 | None:intergenic |
| GTAGAGTAGCCATTCTCAGC+TGG | 0.533250 | 1_1:+42538923 | None:intergenic |
| AAGACTACACCAGCTGAGAA+TGG | 0.552919 | 1_1:-42538932 | Msa0022640:CDS |
| TGGCTACTCTACATCAATCT+GGG | 0.557094 | 1_1:-42538912 | Msa0022640:CDS |
| GAGTTAATCTTCGAAAAGAG+TGG | 0.570774 | 1_1:-42538653 | Msa0022640:CDS |
| ATCATGAGGCATATGAGGAG+TGG | 0.581486 | 1_1:-42538865 | Msa0022640:CDS |
| AGAATGGATCCCAAGAGATG+TGG | 0.586826 | 1_1:-42538977 | Msa0022640:CDS |
| CGGGTGTTGCTTGCAAAACA+CGG | 0.601763 | 1_1:+42538825 | None:intergenic |
| TATCACAGAAAAGGATCATG+AGG | 0.608121 | 1_1:-42538879 | Msa0022640:CDS |
| AGCAATCGAGACCAATTGAA+CGG | 0.624783 | 1_1:+42538805 | None:intergenic |
| TGAATCTGATAATAACATAG+GGG | 0.669556 | 1_1:-42538696 | Msa0022640:CDS |
| CATGAGGCATATGAGGAGTG+GGG | 0.686751 | 1_1:-42538863 | Msa0022640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATAAAATTGAAGAATTGA+AGG | - | chr1_1:42538891-42538910 | Msa0022640:CDS | 20.0% |
| !! | TGACAATTTTATCACAGAAA+AGG | - | chr1_1:42538522-42538541 | Msa0022640:CDS | 25.0% |
| ! | TCTGAATCTGATAATAACAT+AGG | - | chr1_1:42538712-42538731 | Msa0022640:CDS | 25.0% |
| ! | CTGAATCTGATAATAACATA+GGG | - | chr1_1:42538713-42538732 | Msa0022640:CDS | 25.0% |
| ! | TGAATCTGATAATAACATAG+GGG | - | chr1_1:42538714-42538733 | Msa0022640:CDS | 25.0% |
| !! | AATGAAAACTCCAAGATTTT+AGG | - | chr1_1:42538808-42538827 | Msa0022640:CDS | 25.0% |
| ! | GTGCAATTTTCCTAAAATCT+TGG | + | chr1_1:42538821-42538840 | None:intergenic | 30.0% |
| CTTGTAAACAATTCCTTCTT+TGG | + | chr1_1:42538845-42538864 | None:intergenic | 30.0% | |
| AGAAGGAATTGTTTACAAGT+TGG | - | chr1_1:42538846-42538865 | Msa0022640:CDS | 30.0% | |
| TATCACAGAAAAGGATCATG+AGG | - | chr1_1:42538531-42538550 | Msa0022640:CDS | 35.0% | |
| TGATTTGAAAAAGAGCTGCA+GGG | - | chr1_1:42538651-42538670 | Msa0022640:CDS | 35.0% | |
| GAGTTAATCTTCGAAAAGAG+TGG | - | chr1_1:42538757-42538776 | Msa0022640:CDS | 35.0% | |
| !! | CTTCGAAAAGAGTGGATTAA+TGG | - | chr1_1:42538765-42538784 | Msa0022640:CDS | 35.0% |
| !! | GAGTGGATTAATGGAAAGAA+CGG | - | chr1_1:42538774-42538793 | Msa0022640:CDS | 35.0% |
| ! | AGGAATTGTTTACAAGTTGG+AGG | - | chr1_1:42538849-42538868 | Msa0022640:CDS | 35.0% |
| ATTGTAGTTCAGCACAATGT+TGG | - | chr1_1:42538919-42538938 | Msa0022640:CDS | 35.0% | |
| ! | CTACGTTTTCCACATCTCTT+GGG | + | chr1_1:42538445-42538464 | None:intergenic | 40.0% |
| ATGGCTACTCTACATCAATC+TGG | - | chr1_1:42538497-42538516 | Msa0022640:CDS | 40.0% | |
| TGGCTACTCTACATCAATCT+GGG | - | chr1_1:42538498-42538517 | Msa0022640:CDS | 40.0% | |
| AAAGGATCATGAGGCATATG+AGG | - | chr1_1:42538540-42538559 | Msa0022640:CDS | 40.0% | |
| AGCAATCGAGACCAATTGAA+CGG | + | chr1_1:42538608-42538627 | None:intergenic | 40.0% | |
| GTGATTTGAAAAAGAGCTGC+AGG | - | chr1_1:42538650-42538669 | Msa0022640:CDS | 40.0% | |
| GGAAAATTGCACACCAAAGA+AGG | - | chr1_1:42538829-42538848 | Msa0022640:CDS | 40.0% | |
| !! | GCACAATGTTGGCTTTAATG+AGG | - | chr1_1:42538930-42538949 | Msa0022640:CDS | 40.0% |
| ! | GCTACGTTTTCCACATCTCT+TGG | + | chr1_1:42538446-42538465 | None:intergenic | 45.0% |
| AAGACTACACCAGCTGAGAA+TGG | - | chr1_1:42538478-42538497 | Msa0022640:CDS | 45.0% | |
| ATCATGAGGCATATGAGGAG+TGG | - | chr1_1:42538545-42538564 | Msa0022640:CDS | 45.0% | |
| TCATGAGGCATATGAGGAGT+GGG | - | chr1_1:42538546-42538565 | Msa0022640:CDS | 45.0% | |
| GCAATCGAGACCAATTGAAC+GGG | + | chr1_1:42538607-42538626 | None:intergenic | 45.0% | |
| TGCTCGTTGTATGGAGCAAA+AGG | - | chr1_1:42538624-42538643 | Msa0022640:CDS | 45.0% | |
| GTAGAGTAGCCATTCTCAGC+TGG | + | chr1_1:42538490-42538509 | None:intergenic | 50.0% | |
| CATGAGGCATATGAGGAGTG+GGG | - | chr1_1:42538547-42538566 | Msa0022640:CDS | 50.0% | |
| !! | CGGGTGTTGCTTGCAAAACA+CGG | + | chr1_1:42538588-42538607 | None:intergenic | 50.0% |
| GCAAGCAACACCCGTTCAAT+TGG | - | chr1_1:42538594-42538613 | Msa0022640:CDS | 50.0% | |
| GGTCTCGATTGCTCGTTGTA+TGG | - | chr1_1:42538615-42538634 | Msa0022640:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 42538436 | 42538996 | 42538436 | ID=Msa0022640;Name=Msa0022640 |
| chr1_1 | mRNA | 42538436 | 42538996 | 42538436 | ID=Msa0022640-mRNA-1;Parent=Msa0022640;Name=Msa0022640-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|-1|0|1|-1|1|1|0|186 |
| chr1_1 | exon | 42538436 | 42538996 | 42538436 | ID=Msa0022640-mRNA-1:exon:12457;Parent=Msa0022640-mRNA-1 |
| chr1_1 | CDS | 42538436 | 42538996 | 42538436 | ID=Msa0022640-mRNA-1:cds;Parent=Msa0022640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
