Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323440 | XP_013445265.1 | 94.092 | 694 | 27 | 1 | 1 | 680 | 1 | 694 | 0.0 | 1355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323440 | sp|Q39128|KAT1_ARATH | 55.237 | 697 | 263 | 7 | 1 | 671 | 1 | 674 | 0.0 | 755 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323440 | A0A072TQ05 | 94.092 | 694 | 27 | 1 | 1 | 680 | 1 | 694 | 0.0 | 1355 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012740 | Msa1323440 | 0.812839 | 3.464341e-51 | -8.615850e-47 |
| Msa0030030 | Msa1323440 | 0.811752 | 5.982930e-51 | -8.615850e-47 |
| Msa0040190 | Msa1323440 | 0.801092 | 1.060044e-48 | -8.615850e-47 |
| Msa0077330 | Msa1323440 | 0.821221 | 4.530881e-53 | -8.615850e-47 |
| Msa0685880 | Msa1323440 | 0.802514 | 5.411983e-49 | -8.615850e-47 |
| Msa0721150 | Msa1323440 | 0.803493 | 3.395722e-49 | -8.615850e-47 |
| Msa0736930 | Msa1323440 | 0.805213 | 1.488246e-49 | -8.615850e-47 |
| Msa0739610 | Msa1323440 | 0.809036 | 2.307335e-50 | -8.615850e-47 |
| Msa0765010 | Msa1323440 | 0.829556 | 4.818595e-55 | -8.615850e-47 |
| Msa0842270 | Msa1323440 | 0.801964 | 7.022341e-49 | -8.615850e-47 |
| Msa0169960 | Msa1323440 | 0.818179 | 2.243226e-52 | -8.615850e-47 |
| Msa0181290 | Msa1323440 | 0.818728 | 1.684324e-52 | -8.615850e-47 |
| Msa0216560 | Msa1323440 | 0.804076 | 2.569823e-49 | -8.615850e-47 |
| Msa0226290 | Msa1323440 | 0.805420 | 1.346532e-49 | -8.615850e-47 |
| Msa1238370 | Msa1323440 | 0.810158 | 1.324321e-50 | -8.615850e-47 |
| Msa1242430 | Msa1323440 | 0.803737 | 3.021447e-49 | -8.615850e-47 |
| Msa1248400 | Msa1323440 | 0.805179 | 1.512770e-49 | -8.615850e-47 |
| Msa1254470 | Msa1323440 | 0.805208 | 1.491438e-49 | -8.615850e-47 |
| Msa1323440 | Msa1405470 | 0.822096 | 2.844022e-53 | -8.615850e-47 |
| Msa0417130 | Msa1323440 | 0.806675 | 7.330971e-50 | -8.615850e-47 |
| Msa0440110 | Msa1323440 | 0.822038 | 2.933471e-53 | -8.615850e-47 |
| Msa1016110 | Msa1323440 | 0.810475 | 1.131546e-50 | -8.615850e-47 |
| Msa0253370 | Msa1323440 | 0.824927 | 6.191743e-54 | -8.615850e-47 |
| Msa0256170 | Msa1323440 | 0.813214 | 2.866394e-51 | -8.615850e-47 |
| Msa0295840 | Msa1323440 | 0.819131 | 1.364212e-52 | -8.615850e-47 |
| Msa0310490 | Msa1323440 | 0.802116 | 6.535574e-49 | -8.615850e-47 |
| Msa0330400 | Msa1323440 | 0.814687 | 1.356886e-51 | -8.615850e-47 |
| Msa1188380 | Msa1323440 | 0.814642 | 1.388479e-51 | -8.615850e-47 |
| Msa0502910 | Msa1323440 | 0.809281 | 2.045233e-50 | -8.615850e-47 |
| Msa0844350 | Msa1323440 | 0.814830 | 1.261662e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323440 | MtrunA17_Chr8g0356081 | 94.092 | 694 | 27 | 1 | 1 | 680 | 1 | 694 | 0.0 | 1355 |
| Msa1323440 | MtrunA17_Chr2g0286031 | 51.399 | 679 | 198 | 10 | 122 | 680 | 17 | 683 | 0.0 | 629 |
| Msa1323440 | MtrunA17_Chr4g0063141 | 56.540 | 474 | 188 | 3 | 20 | 477 | 26 | 497 | 0.0 | 545 |
| Msa1323440 | MtrunA17_Chr2g0277651 | 48.000 | 475 | 231 | 3 | 22 | 480 | 47 | 521 | 2.10e-154 | 467 |
| Msa1323440 | MtrunA17_Chr1g0148981 | 46.857 | 525 | 201 | 8 | 20 | 469 | 30 | 551 | 3.57e-150 | 461 |
| Msa1323440 | MtrunA17_Chr3g0138671 | 43.794 | 564 | 282 | 9 | 20 | 561 | 23 | 573 | 7.87e-144 | 433 |
| Msa1323440 | MtrunA17_Chr3g0138131 | 50.508 | 394 | 171 | 5 | 23 | 397 | 46 | 434 | 4.57e-125 | 379 |
| Msa1323440 | MtrunA17_Chr5g0434371 | 32.371 | 485 | 297 | 9 | 29 | 490 | 71 | 547 | 3.10e-74 | 255 |
| Msa1323440 | MtrunA17_Chr2g0286041 | 62.121 | 132 | 39 | 1 | 1 | 121 | 1 | 132 | 9.80e-48 | 164 |
| Msa1323440 | MtrunA17_Chr4g0063071 | 32.883 | 222 | 147 | 1 | 248 | 467 | 5 | 226 | 1.39e-32 | 126 |
| Msa1323440 | MtrunA17_Chr4g0062571 | 30.769 | 221 | 121 | 7 | 71 | 274 | 2 | 207 | 1.76e-16 | 79.3 |
| Msa1323440 | MtrunA17_Chr4g0073941 | 20.343 | 467 | 271 | 12 | 38 | 406 | 97 | 560 | 5.43e-16 | 82.0 |
| Msa1323440 | MtrunA17_Chr4g0063081 | 30.270 | 185 | 108 | 6 | 57 | 223 | 8 | 189 | 3.61e-15 | 74.7 |
| Msa1323440 | MtrunA17_Chr4g0062561 | 30.088 | 226 | 121 | 8 | 71 | 274 | 2 | 212 | 6.79e-15 | 78.6 |
| Msa1323440 | MtrunA17_Chr4g0009161 | 49.315 | 73 | 36 | 1 | 405 | 477 | 12 | 83 | 1.05e-11 | 65.1 |
| Msa1323440 | MtrunA17_Chr4g0001481 | 19.271 | 192 | 154 | 1 | 216 | 406 | 374 | 565 | 6.84e-11 | 65.9 |
| Msa1323440 | MtrunA17_Chr3g0138141 | 50.769 | 65 | 32 | 0 | 408 | 472 | 11 | 75 | 8.48e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1323440 | AT5G46240.1 | 55.237 | 697 | 263 | 7 | 1 | 671 | 1 | 674 | 0.0 | 755 |
| Msa1323440 | AT4G18290.1 | 54.993 | 711 | 270 | 12 | 1 | 676 | 1 | 696 | 0.0 | 724 |
| Msa1323440 | AT4G18290.2 | 54.993 | 711 | 270 | 12 | 1 | 676 | 12 | 707 | 0.0 | 724 |
| Msa1323440 | AT2G26650.1 | 56.092 | 476 | 188 | 4 | 18 | 477 | 27 | 497 | 0.0 | 546 |
| Msa1323440 | AT2G25600.1 | 54.526 | 475 | 196 | 4 | 21 | 477 | 51 | 523 | 6.52e-172 | 514 |
| Msa1323440 | AT4G32500.1 | 53.333 | 480 | 202 | 4 | 18 | 477 | 44 | 521 | 1.31e-171 | 513 |
| Msa1323440 | AT2G26650.2 | 56.423 | 397 | 152 | 4 | 97 | 477 | 1 | 392 | 7.54e-148 | 448 |
| Msa1323440 | AT4G22200.2 | 46.612 | 487 | 237 | 6 | 15 | 481 | 40 | 523 | 2.29e-147 | 441 |
| Msa1323440 | AT4G22200.1 | 46.612 | 487 | 237 | 6 | 15 | 481 | 40 | 523 | 1.99e-145 | 443 |
| Msa1323440 | AT4G32650.1 | 38.586 | 679 | 324 | 12 | 15 | 670 | 52 | 660 | 1.43e-135 | 413 |
| Msa1323440 | AT4G32650.3 | 38.586 | 679 | 323 | 13 | 15 | 670 | 52 | 659 | 1.28e-134 | 411 |
| Msa1323440 | AT4G32650.2 | 44.928 | 483 | 244 | 6 | 15 | 477 | 52 | 532 | 3.98e-128 | 392 |
| Msa1323440 | AT3G02850.3 | 34.449 | 508 | 279 | 10 | 15 | 476 | 26 | 525 | 1.20e-82 | 273 |
| Msa1323440 | AT3G02850.2 | 34.314 | 510 | 281 | 10 | 13 | 476 | 24 | 525 | 1.12e-81 | 275 |
| Msa1323440 | AT3G02850.1 | 34.314 | 510 | 281 | 10 | 13 | 476 | 24 | 525 | 2.79e-81 | 275 |
| Msa1323440 | AT5G37500.4 | 33.480 | 454 | 274 | 8 | 38 | 468 | 55 | 503 | 4.98e-74 | 253 |
| Msa1323440 | AT5G37500.1 | 33.480 | 454 | 274 | 8 | 38 | 468 | 55 | 503 | 1.88e-73 | 253 |
| Msa1323440 | AT5G37500.2 | 33.480 | 454 | 274 | 8 | 38 | 468 | 55 | 503 | 4.69e-73 | 253 |
| Msa1323440 | AT5G37500.3 | 33.184 | 446 | 270 | 8 | 46 | 468 | 9 | 449 | 4.48e-70 | 244 |
| Msa1323440 | AT5G57940.1 | 20.127 | 472 | 269 | 13 | 38 | 406 | 86 | 552 | 1.88e-12 | 71.2 |
| Msa1323440 | AT5G57940.2 | 20.127 | 472 | 269 | 13 | 38 | 406 | 86 | 552 | 1.88e-12 | 71.2 |
| Msa1323440 | AT5G57940.3 | 20.127 | 472 | 269 | 13 | 38 | 406 | 79 | 545 | 2.26e-12 | 70.9 |
Find 112 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTGACATGCTTCGTTTA+TGG | 0.146203 | 8_4:-31777847 | Msa1323440:CDS |
| TGAACATATAATAGACTTTA+TGG | 0.172466 | 8_4:-31772651 | Msa1323440:CDS |
| CAAAATTATTGCATAGTAAA+AGG | 0.184100 | 8_4:+31771901 | None:intergenic |
| TACTTGCTCCTAAAGAAATT+TGG | 0.186425 | 8_4:+31772597 | None:intergenic |
| GAGAAAACATACAAAATTTC+TGG | 0.193463 | 8_4:+31777032 | None:intergenic |
| AAAAGATTTGACATTATAAT+TGG | 0.201416 | 8_4:+31773447 | None:intergenic |
| GGTCAAGAAGATTTAGGTTT+TGG | 0.233837 | 8_4:-31772920 | Msa1323440:CDS |
| GAAAATCTTGTGAAACTCTT+TGG | 0.257211 | 8_4:+31774087 | None:intergenic |
| TAAAATTTGTGAAAGCTCTT+TGG | 0.273667 | 8_4:+31773524 | None:intergenic |
| ATTACATAAAATCTCATTAA+TGG | 0.275482 | 8_4:-31771939 | Msa1323440:three_prime_UTR |
| ATTATAATTGGTGCTGCTTC+TGG | 0.277918 | 8_4:+31773459 | None:intergenic |
| TTAAGTGGTCAAGAAGATTT+AGG | 0.282480 | 8_4:-31772926 | Msa1323440:CDS |
| ACCGATCATAGCAGCGAGTT+TGG | 0.288257 | 8_4:-31777878 | Msa1323440:CDS |
| AGGAGTGACCAAATTTCTTT+AGG | 0.296498 | 8_4:-31772605 | Msa1323440:CDS |
| GAAGATACATTTGGAGAGAT+TGG | 0.307981 | 8_4:-31773585 | Msa1323440:CDS |
| ATGCTTGCGCGAATTGCTTT+TGG | 0.309205 | 8_4:+31774155 | None:intergenic |
| TGTAGCATAACATCTACTTT+AGG | 0.324139 | 8_4:+31773926 | None:intergenic |
| ATTGTTTCTTTCAATTCCTT+TGG | 0.325775 | 8_4:+31771828 | None:intergenic |
| TCTTTCTGTTTCCATCTAAC+AGG | 0.326795 | 8_4:+31772725 | None:intergenic |
| CAAAACAAGAGTCATGAAAA+TGG | 0.327013 | 8_4:-31772686 | Msa1323440:CDS |
| AGACTCATTTCCTTAAAATC+AGG | 0.330725 | 8_4:+31777243 | None:intergenic |
| GGATTAACAGCTTATATCAT+TGG | 0.331046 | 8_4:-31777093 | Msa1323440:CDS |
| TCTGAATTTAGTATTATTGT+AGG | 0.333982 | 8_4:+31772093 | None:intergenic |
| GCTGCTATGATCGGTGAATA+TGG | 0.336774 | 8_4:+31777886 | None:intergenic |
| ACATTAACTACTACTGGATA+TGG | 0.350187 | 8_4:-31777180 | Msa1323440:CDS |
| AAACAGCAAGAAACAATAAA+TGG | 0.355281 | 8_4:-31774182 | Msa1323440:CDS |
| TTTAGTATTATTGTAGGCCT+TGG | 0.358325 | 8_4:+31772099 | None:intergenic |
| ATCATAAGAAAATTGCAAAA+AGG | 0.364458 | 8_4:-31778101 | Msa1323440:intron |
| TGCTTCTGGATTTGCTTGTA+AGG | 0.365673 | 8_4:+31773473 | None:intergenic |
| TGGGTTGATGATTTCCAAAC+TGG | 0.382275 | 8_4:-31778533 | Msa1323440:CDS |
| TATAATTTCTTGCAGGGCTT+GGG | 0.383623 | 8_4:-31778310 | Msa1323440:intron |
| ATCAAACTTGTTGCTAGCTC+TGG | 0.385508 | 8_4:-31771789 | Msa1323440:three_prime_UTR |
| AGCAACAACCTTTCACTGTT+AGG | 0.391736 | 8_4:-31773548 | Msa1323440:CDS |
| ATAGGTACCATGATTCAAAA+AGG | 0.392543 | 8_4:-31777287 | Msa1323440:CDS |
| TGACAAATCTTGTTGTTCAA+TGG | 0.396179 | 8_4:-31777065 | Msa1323440:CDS |
| TGGATACATGTTGTTCAACT+TGG | 0.398387 | 8_4:-31777115 | Msa1323440:CDS |
| AGAAGCTAAGTCCTGTTAGA+TGG | 0.400842 | 8_4:-31772736 | Msa1323440:CDS |
| ATTGTGACATTAACTACTAC+TGG | 0.403325 | 8_4:-31777186 | Msa1323440:CDS |
| GAAACTGCAGGAGAAAAGTT+TGG | 0.409163 | 8_4:-31772126 | Msa1323440:intron |
| AGGTAGGATTTCTGCACAAC+AGG | 0.414712 | 8_4:+31774113 | None:intergenic |
| ATCGGTGAATATGGAGCTAA+TGG | 0.417380 | 8_4:+31777895 | None:intergenic |
| ATCATAGATAACATTGTGAA+TGG | 0.421566 | 8_4:-31778198 | Msa1323440:CDS |
| TTAACTATTTACTTGCAGAT+AGG | 0.425817 | 8_4:-31777305 | Msa1323440:CDS |
| GATCTCATTCGCAGTGTTGA+TGG | 0.426673 | 8_4:-31773770 | Msa1323440:CDS |
| ACTGGTATCTTGCCATCTCT+TGG | 0.429334 | 8_4:-31778515 | Msa1323440:CDS |
| AGCAGCTCATCCAATGAATC+AGG | 0.431556 | 8_4:+31772461 | None:intergenic |
| TTCTTAGTTTAGTTTCTTGG+TGG | 0.442673 | 8_4:+31778483 | None:intergenic |
| GGCAGAAAAGCAAATTGAAA+GGG | 0.444608 | 8_4:+31778243 | None:intergenic |
| ATAGAATTACCTCCGTTAGA+AGG | 0.446907 | 8_4:+31777437 | None:intergenic |
| CAGATAACCTTAGCCATGTT+AGG | 0.447586 | 8_4:-31772625 | Msa1323440:CDS |
| GCAAGTGCAGAAGATACATT+TGG | 0.454936 | 8_4:-31773594 | Msa1323440:CDS |
| CAAGAGATGTTGTTTGACAT+TGG | 0.455628 | 8_4:-31777135 | Msa1323440:CDS |
| TTCTAGTGCTTTACTCTGCA+TGG | 0.457513 | 8_4:-31778272 | Msa1323440:CDS |
| GATCTATACATGTTGGTCTC+AGG | 0.472398 | 8_4:-31773887 | Msa1323440:CDS |
| TTTAAATAGGTTCCTTCTAA+CGG | 0.473145 | 8_4:-31777449 | Msa1323440:intron |
| ACCAACATGTATAGATCTGT+TGG | 0.488657 | 8_4:+31773893 | None:intergenic |
| GATGAGCTGCTCAAGATTGT+TGG | 0.491676 | 8_4:-31772449 | Msa1323440:intron |
| TCTTATGATCATCAATAAGA+AGG | 0.495380 | 8_4:+31778115 | None:intergenic |
| CTTGCAGGGCTTGGGACAAG+TGG | 0.496211 | 8_4:-31778302 | Msa1323440:intron |
| GAGATGGCAAGATACCAGTT+TGG | 0.505157 | 8_4:+31778519 | None:intergenic |
| GATATGTGATAGCAATGTAT+TGG | 0.506357 | 8_4:-31777212 | Msa1323440:CDS |
| TACCAGTAATTTCGATCGAA+GGG | 0.507573 | 8_4:+31778446 | None:intergenic |
| CTTGTGAAACTCTTTGGAAG+AGG | 0.512428 | 8_4:+31774093 | None:intergenic |
| GGATACATGTTGTTCAACTT+GGG | 0.513252 | 8_4:-31777114 | Msa1323440:CDS |
| TCCAAACTCGCTGCTATGAT+CGG | 0.522570 | 8_4:+31777877 | None:intergenic |
| GTCTTGTCCTACATAGTGAA+TGG | 0.526427 | 8_4:+31772526 | None:intergenic |
| AATCTATTGACATATGAGAA+TGG | 0.530668 | 8_4:+31778569 | None:intergenic |
| TTGTTTGCAGTACACTGTGC+TGG | 0.530735 | 8_4:-31777333 | Msa1323440:CDS |
| TGTCTCAAGTTCAAAACAGA+AGG | 0.534513 | 8_4:-31774209 | Msa1323440:CDS |
| CAAAGATAAACCAGGTACAT+AGG | 0.535059 | 8_4:+31777945 | None:intergenic |
| GACTCATTTCCTTAAAATCA+GGG | 0.537535 | 8_4:+31777244 | None:intergenic |
| CATCAATAAGAAGGTAGGAA+TGG | 0.538204 | 8_4:+31778124 | None:intergenic |
| AGGCAGAAAAGCAAATTGAA+AGG | 0.539988 | 8_4:+31778242 | None:intergenic |
| ATTTCAGGTACCTATGTACC+TGG | 0.540333 | 8_4:-31777955 | Msa1323440:intron |
| ACCAAGTTACAAGGAAAACA+TGG | 0.541288 | 8_4:-31772500 | Msa1323440:CDS |
| GGTCACTCCTAACATGGCTA+AGG | 0.542535 | 8_4:+31772618 | None:intergenic |
| TACTTTAGGTGGAAAATACT+CGG | 0.543086 | 8_4:+31773940 | None:intergenic |
| TCATGAAGAGACAATCTAGT+AGG | 0.544174 | 8_4:+31772890 | None:intergenic |
| TGAAACTCTTTGGAAGAGGT+AGG | 0.544474 | 8_4:+31774097 | None:intergenic |
| CAAGACAGAACCAAGTTACA+AGG | 0.545091 | 8_4:-31772509 | Msa1323440:CDS |
| AGAGTTACCATTCACTATGT+AGG | 0.549174 | 8_4:-31772533 | Msa1323440:CDS |
| AGCATAACATCTACTTTAGG+TGG | 0.555493 | 8_4:+31773929 | None:intergenic |
| ATGATCATCAATAAGAAGGT+AGG | 0.555706 | 8_4:+31778119 | None:intergenic |
| TTACCAGTAATTTCGATCGA+AGG | 0.556205 | 8_4:+31778445 | None:intergenic |
| TCTTTGGTCCTAACAGTGAA+AGG | 0.556992 | 8_4:+31773540 | None:intergenic |
| AGCACAGTGTACTGCAAACA+AGG | 0.557730 | 8_4:+31777335 | None:intergenic |
| CATAATGAATGCACAACCAA+AGG | 0.564845 | 8_4:-31771844 | Msa1323440:three_prime_UTR |
| TGGACTCTTGCTCCAAGAGA+TGG | 0.566319 | 8_4:+31778503 | None:intergenic |
| CAAGTAACCATCAAATCGAA+AGG | 0.584455 | 8_4:-31772580 | Msa1323440:CDS |
| GACCTTTGTGTCATTCGAGA+CGG | 0.589584 | 8_4:-31772054 | Msa1323440:CDS |
| GAGTCAGTTCTCTCTTTGCA+AGG | 0.598149 | 8_4:-31777814 | Msa1323440:intron |
| GAGAAAAGTTTGGAGGGCCA+AGG | 0.600290 | 8_4:-31772116 | Msa1323440:CDS |
| TGAAGAGACAATCTAGTAGG+TGG | 0.607924 | 8_4:+31772893 | None:intergenic |
| AAATTTGGTCACTCCTAACA+TGG | 0.608000 | 8_4:+31772612 | None:intergenic |
| CTGCAGGAGAAAAGTTTGGA+GGG | 0.609739 | 8_4:-31772122 | Msa1323440:intron |
| TTGTCTCTTCATGACATACA+TGG | 0.609853 | 8_4:-31772881 | Msa1323440:CDS |
| AAATAGGTTCCTTCTAACGG+AGG | 0.611118 | 8_4:-31777446 | Msa1323440:intron |
| CATGTTGGTCTCAGGATCAG+TGG | 0.614447 | 8_4:-31773879 | Msa1323440:intron |
| TCATCTACCTCATGAGACAC+AGG | 0.623602 | 8_4:-31774252 | Msa1323440:CDS |
| CCAGTAATTTCGATCGAAGG+GGG | 0.626921 | 8_4:+31778448 | None:intergenic |
| TCCAACAGATCTATACATGT+TGG | 0.630698 | 8_4:-31773894 | Msa1323440:CDS |
| ACTGCAGGAGAAAAGTTTGG+AGG | 0.631832 | 8_4:-31772123 | Msa1323440:intron |
| ATTTGATCCTGTGTCTCATG+AGG | 0.638358 | 8_4:+31774245 | None:intergenic |
| ATGGAGCTAATGGTTTGAAG+AGG | 0.639706 | 8_4:+31777905 | None:intergenic |
| ACCAGTAATTTCGATCGAAG+GGG | 0.648047 | 8_4:+31778447 | None:intergenic |
| GCAGAAAAGCAAATTGAAAG+GGG | 0.652733 | 8_4:+31778244 | None:intergenic |
| CACCGTCTCGAATGACACAA+AGG | 0.661055 | 8_4:+31772052 | None:intergenic |
| ATACTCGGTTCACGTGTGAG+TGG | 0.661841 | 8_4:-31771703 | Msa1323440:three_prime_UTR |
| CCAAGTTACAAGGAAAACAT+GGG | 0.667847 | 8_4:-31772499 | Msa1323440:CDS |
| TCTCTTCATGACATACATGG+TGG | 0.688736 | 8_4:-31772878 | Msa1323440:CDS |
| ACAAACATCAAAGATAAACC+AGG | 0.718745 | 8_4:+31777937 | None:intergenic |
| TACATGGTGGAAACAACACA+AGG | 0.729516 | 8_4:-31772865 | Msa1323440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTTTTTATTATT+GGG | + | chr8_4:31773632-31773651 | None:intergenic | 0.0% |
| !!! | TAATTTTTTTTTTTTATTAT+TGG | + | chr8_4:31773633-31773652 | None:intergenic | 0.0% |
| !!! | TTTTATTTTTTATTTTTTTA+AGG | + | chr8_4:31775275-31775294 | None:intergenic | 0.0% |
| !!! | ATTTTATTTTATTTTATTTT+TGG | + | chr8_4:31775336-31775355 | None:intergenic | 0.0% |
| !!! | TTTTAATTAAAAGGATAATT+TGG | + | chr8_4:31773577-31773596 | None:intergenic | 10.0% |
| !!! | ATAATTTGGTTTTAATTAAA+AGG | + | chr8_4:31773586-31773605 | None:intergenic | 10.0% |
| !! | AGAGTAAATATTTATATTTA+TGG | - | chr8_4:31774381-31774400 | Msa1323440:intron | 10.0% |
| !! | GAGTAAATATTTATATTTAT+GGG | - | chr8_4:31774382-31774401 | Msa1323440:intron | 10.0% |
| !!! | TATTTTTTATTTTTTTAAGG+AGG | + | chr8_4:31775272-31775291 | None:intergenic | 10.0% |
| !!! | TTATTCAAATTTTAAAAACT+AGG | - | chr8_4:31777250-31777269 | Msa1323440:CDS | 10.0% |
| !! | TATATAATATAATTTCTTGC+AGG | - | chr8_4:31771965-31771984 | Msa1323440:three_prime_UTR | 15.0% |
| !! | ATATAATATAATTTCTTGCA+GGG | - | chr8_4:31771966-31771985 | Msa1323440:three_prime_UTR | 15.0% |
| !! | AAATAAATAACATAGTAAAG+TGG | + | chr8_4:31772218-31772237 | None:intergenic | 15.0% |
| !!! | TTCATTTTATTAATTCTACA+AGG | + | chr8_4:31772244-31772263 | None:intergenic | 15.0% |
| !!! | GAGTTTGAAAAAATTAATTT+TGG | - | chr8_4:31773434-31773453 | Msa1323440:intron | 15.0% |
| !!! | TTTTTTTTATTATTGGGTTT+GGG | + | chr8_4:31773626-31773645 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTATTATTGGGTT+TGG | + | chr8_4:31773627-31773646 | None:intergenic | 15.0% |
| !! | AAAATATAACTTTACATAGT+TGG | - | chr8_4:31774297-31774316 | Msa1323440:intron | 15.0% |
| !!! | GTACTTTATGTTTTTTTTTT+TGG | - | chr8_4:31774789-31774808 | Msa1323440:intron | 15.0% |
| !!! | ATTTTTTTTAACCTCAAATA+TGG | - | chr8_4:31774971-31774990 | Msa1323440:intron | 15.0% |
| !! | TTATAAATATACCATATTTG+AGG | + | chr8_4:31774985-31775004 | None:intergenic | 15.0% |
| !!! | ATCAACTATCAATATTATTT+TGG | + | chr8_4:31775539-31775558 | None:intergenic | 15.0% |
| !! | AGAAACTATTTGATTAAAAT+TGG | + | chr8_4:31775661-31775680 | None:intergenic | 15.0% |
| !! | ATTGAGTTCTTAAATATATA+CGG | + | chr8_4:31775881-31775900 | None:intergenic | 15.0% |
| !!! | ATGCTTTATTAGTTATTTAT+TGG | - | chr8_4:31776241-31776260 | Msa1323440:intron | 15.0% |
| !! | TAGTCTTTAAATTCATAAAA+AGG | + | chr8_4:31776580-31776599 | None:intergenic | 15.0% |
| !! | AAAAGATTTGACATTATAAT+TGG | + | chr8_4:31776838-31776857 | None:intergenic | 15.0% |
| !!! | TATAATGTCAAATCTTTTTA+TGG | - | chr8_4:31776840-31776859 | Msa1323440:intron | 15.0% |
| !!! | CTGAGAAATTTTATTTTTTT+AGG | + | chr8_4:31777137-31777156 | None:intergenic | 15.0% |
| !! | AATTTACAAAAAATTCACAT+GGG | - | chr8_4:31777456-31777475 | Msa1323440:intron | 15.0% |
| !!! | TTAAATTTTACATGATTAGT+TGG | + | chr8_4:31778081-31778100 | None:intergenic | 15.0% |
| !! | ATTACATAAAATCTCATTAA+TGG | - | chr8_4:31778343-31778362 | Msa1323440:intron | 15.0% |
| !!! | TTTATTCCAATTTTTCATTT+AGG | + | chr8_4:31778559-31778578 | None:intergenic | 15.0% |
| !! | AAAAATTGGAATAAAATACT+CGG | - | chr8_4:31778564-31778583 | Msa1323440:CDS | 15.0% |
| !!! | ATAGATTTTTCAAGATGTTT+TGG | - | chr8_4:31771729-31771748 | Msa1323440:three_prime_UTR | 20.0% |
| !!! | TAGATTTTTCAAGATGTTTT+GGG | - | chr8_4:31771730-31771749 | Msa1323440:three_prime_UTR | 20.0% |
| !!! | ATTTTCTTAGTTTAGTTTCT+TGG | + | chr8_4:31771805-31771824 | None:intergenic | 20.0% |
| !! | ATCATAAGAAAATTGCAAAA+AGG | - | chr8_4:31772181-31772200 | Msa1323440:intron | 20.0% |
| !!! | GACAAGAATTATTTTTTTCT+TGG | - | chr8_4:31772288-31772307 | Msa1323440:intron | 20.0% |
| !!! | CAGTTTTAAATAAAGTTATG+CGG | + | chr8_4:31772672-31772691 | None:intergenic | 20.0% |
| !! | GAAACATTTCAAATTCTAAT+TGG | + | chr8_4:31772901-31772920 | None:intergenic | 20.0% |
| !!! | CTATAAAAAGCATAAGTATA+AGG | + | chr8_4:31773278-31773297 | None:intergenic | 20.0% |
| !! | TGTTGGAATATTAGATAATT+TGG | + | chr8_4:31773600-31773619 | None:intergenic | 20.0% |
| !! | AAATCTGAAGGAAAAAAAAT+AGG | - | chr8_4:31773869-31773888 | Msa1323440:intron | 20.0% |
| !!! | AGAAGAAAGATGTTTTTTTA+TGG | - | chr8_4:31773954-31773973 | Msa1323440:CDS | 20.0% |
| !!! | TCCAAATTTATTTTCCTAAT+TGG | - | chr8_4:31775440-31775459 | Msa1323440:intron | 20.0% |
| !!! | CCAAATTTATTTTCCTAATT+GGG | - | chr8_4:31775441-31775460 | Msa1323440:intron | 20.0% |
| !!! | TTGCTTAAATTTTAAGTCAT+CGG | + | chr8_4:31775844-31775863 | None:intergenic | 20.0% |
| !! | ATATTGGTAAGATCTTTAAT+AGG | + | chr8_4:31775910-31775929 | None:intergenic | 20.0% |
| !! | ATTAAGTAGGATTGTAATAT+TGG | + | chr8_4:31775926-31775945 | None:intergenic | 20.0% |
| !! | AAAAGTGAAGGATTATATTT+CGG | + | chr8_4:31777001-31777020 | None:intergenic | 20.0% |
| !! | AAGATAAGCTATAAATTTAG+TGG | + | chr8_4:31777047-31777066 | None:intergenic | 20.0% |
| !!! | TTCCGATTTTATAATCTTTT+AGG | - | chr8_4:31777283-31777302 | Msa1323440:CDS | 20.0% |
| !!! | TCCGATTTTATAATCTTTTA+GGG | - | chr8_4:31777284-31777303 | Msa1323440:CDS | 20.0% |
| !! | TCCCTAAAAGATTATAAAAT+CGG | + | chr8_4:31777288-31777307 | None:intergenic | 20.0% |
| !! | GAATTTACAAAAAATTCACA+TGG | - | chr8_4:31777455-31777474 | Msa1323440:intron | 20.0% |
| !! | ATTTACAAAAAATTCACATG+GGG | - | chr8_4:31777457-31777476 | Msa1323440:intron | 20.0% |
| !! | TGAACATATAATAGACTTTA+TGG | - | chr8_4:31777631-31777650 | Msa1323440:intron | 20.0% |
| !! | TCTGAATTTAGTATTATTGT+AGG | + | chr8_4:31778192-31778211 | None:intergenic | 20.0% |
| !! | CAAAATTATTGCATAGTAAA+AGG | + | chr8_4:31778384-31778403 | None:intergenic | 20.0% |
| ! | AATCTATTGACATATGAGAA+TGG | + | chr8_4:31771716-31771735 | None:intergenic | 25.0% |
| ! | ATCATAGATAACATTGTGAA+TGG | - | chr8_4:31772084-31772103 | Msa1323440:CDS | 25.0% |
| ! | TCTTATGATCATCAATAAGA+AGG | + | chr8_4:31772170-31772189 | None:intergenic | 25.0% |
| ! | TTCATAAAAACTTCGATTTC+AGG | - | chr8_4:31772312-31772331 | Msa1323440:intron | 25.0% |
| !! | TTGTGATTTAAAACAATGCT+TGG | + | chr8_4:31772534-31772553 | None:intergenic | 25.0% |
| ! | TCTTAATATTGCAAAAATCG+CGG | - | chr8_4:31772566-31772585 | Msa1323440:CDS | 25.0% |
| ! | TTTAAATAGGTTCCTTCTAA+CGG | - | chr8_4:31772833-31772852 | Msa1323440:CDS | 25.0% |
| !! | GACTTTTGATCAAATTTTTC+AGG | - | chr8_4:31772921-31772940 | Msa1323440:CDS | 25.0% |
| ! | TTAACTATTTACTTGCAGAT+AGG | - | chr8_4:31772977-31772996 | Msa1323440:intron | 25.0% |
| !!! | ATTTTAAGGAAATGAGTCTT+TGG | - | chr8_4:31773043-31773062 | Msa1323440:intron | 25.0% |
| !!! | TTTTAAGGAAATGAGTCTTT+GGG | - | chr8_4:31773044-31773063 | Msa1323440:intron | 25.0% |
| ! | GAGAAAACATACAAAATTTC+TGG | + | chr8_4:31773253-31773272 | None:intergenic | 25.0% |
| ! | TGATGTGAATTGATTATGTT+TGG | - | chr8_4:31773470-31773489 | Msa1323440:CDS | 25.0% |
| !!! | TTTTATGAGTTGATGTTGTT+TGG | - | chr8_4:31773514-31773533 | Msa1323440:CDS | 25.0% |
| ! | ATGGAGAAATTGTTCTTAAT+TGG | + | chr8_4:31773831-31773850 | None:intergenic | 25.0% |
| ! | AGAAGAAAGATGTTTATTCA+TGG | - | chr8_4:31773981-31774000 | Msa1323440:intron | 25.0% |
| ! | GAAGAAAGATGTTTATTCAT+GGG | - | chr8_4:31773982-31774001 | Msa1323440:intron | 25.0% |
| ! | GAAATTGGAGAAAAAAACAT+GGG | - | chr8_4:31774004-31774023 | Msa1323440:intron | 25.0% |
| ! | AGAAAAAAACATGGGTATAT+TGG | - | chr8_4:31774012-31774031 | Msa1323440:intron | 25.0% |
| ! | ATCCAAACAAAACAGAAAAT+TGG | - | chr8_4:31774166-31774185 | Msa1323440:CDS | 25.0% |
| ! | TCCAAACAAAACAGAAAATT+GGG | - | chr8_4:31774167-31774186 | Msa1323440:CDS | 25.0% |
| ! | AGATGTTGAATCATATTTCA+CGG | + | chr8_4:31774273-31774292 | None:intergenic | 25.0% |
| ! | AATATTTACTCTGTCTATTG+CGG | + | chr8_4:31774373-31774392 | None:intergenic | 25.0% |
| ! | TAATTACACACAAACTTGAA+TGG | - | chr8_4:31774417-31774436 | Msa1323440:intron | 25.0% |
| ! | ATTGCAGATATTAATACTCT+AGG | - | chr8_4:31774445-31774464 | Msa1323440:intron | 25.0% |
| ! | TATATATATATGTTGGTCGT+GGG | + | chr8_4:31774482-31774501 | None:intergenic | 25.0% |
| ! | ATATATATATATGTTGGTCG+TGG | + | chr8_4:31774483-31774502 | None:intergenic | 25.0% |
| ! | AGCAAGTGATGTAAATTTAT+TGG | - | chr8_4:31774692-31774711 | Msa1323440:intron | 25.0% |
| ! | GTTAGAATCCTATTCATTAA+GGG | - | chr8_4:31774714-31774733 | Msa1323440:intron | 25.0% |
| ! | ATTAAGGGAAGACTATTTAT+TGG | - | chr8_4:31774729-31774748 | Msa1323440:intron | 25.0% |
| !! | CATTTTCCTTAGAATAAATC+CGG | - | chr8_4:31774844-31774863 | Msa1323440:intron | 25.0% |
| ! | CCCAATTAGGAAAATAAATT+TGG | + | chr8_4:31775444-31775463 | None:intergenic | 25.0% |
| ! | TAGAGAGAAGAAAATTAAGT+AGG | + | chr8_4:31775939-31775958 | None:intergenic | 25.0% |
| ! | CTCTCTAATGAATAAACTAT+TGG | - | chr8_4:31775952-31775971 | Msa1323440:intron | 25.0% |
| !!! | GAATAAACTATTGGTTTTTG+TGG | - | chr8_4:31775961-31775980 | Msa1323440:intron | 25.0% |
| ! | AAACAGCAAGAAACAATAAA+TGG | - | chr8_4:31776100-31776119 | Msa1323440:intron | 25.0% |
| !! | ACAAGATTTTCTATTTCAAC+TGG | - | chr8_4:31776207-31776226 | Msa1323440:intron | 25.0% |
| ! | CCTTGTAATAGATAACAATA+AGG | + | chr8_4:31776278-31776297 | None:intergenic | 25.0% |
| ! | CCTTATTGTTATCTATTACA+AGG | - | chr8_4:31776275-31776294 | Msa1323440:intron | 25.0% |
| ! | GTAAGTAACTTTGTAACAAT+AGG | - | chr8_4:31776304-31776323 | Msa1323440:intron | 25.0% |
| ! | ATTTAAAGACTATGCATCAA+TGG | - | chr8_4:31776588-31776607 | Msa1323440:intron | 25.0% |
| ! | AACCTGAATTATTCATGTTA+GGG | + | chr8_4:31776659-31776678 | None:intergenic | 25.0% |
| ! | AAACCTGAATTATTCATGTT+AGG | + | chr8_4:31776660-31776679 | None:intergenic | 25.0% |
| !!! | AATAATTCAGGTTTTGATGA+AGG | - | chr8_4:31776666-31776685 | Msa1323440:intron | 25.0% |
| ! | TAAAATTTGTGAAAGCTCTT+TGG | + | chr8_4:31776761-31776780 | None:intergenic | 25.0% |
| !! | AAGAGCTTTCACAAATTTTA+AGG | - | chr8_4:31776761-31776780 | Msa1323440:intron | 25.0% |
| ! | GTAAGTTTGTGAAAAATAAG+AGG | + | chr8_4:31776954-31776973 | None:intergenic | 25.0% |
| !! | TCTGAAATGTTAAAAAGTGA+AGG | + | chr8_4:31777013-31777032 | None:intergenic | 25.0% |
| ! | ATTATTCAACATTACACATC+AGG | + | chr8_4:31777071-31777090 | None:intergenic | 25.0% |
| ! | TGTAATGTTGAATAATGAGT+TGG | - | chr8_4:31777075-31777094 | Msa1323440:CDS | 25.0% |
| !!! | AAGTTGAATAATGAGTTGAT+CGG | + | chr8_4:31777190-31777209 | None:intergenic | 25.0% |
| !!! | TTATAATCTTTTAGGGAGAA+AGG | - | chr8_4:31777291-31777310 | Msa1323440:CDS | 25.0% |
| !!! | TATAATCTTTTAGGGAGAAA+GGG | - | chr8_4:31777292-31777311 | Msa1323440:CDS | 25.0% |
| ! | TTTACAAAAAATTCACATGG+GGG | - | chr8_4:31777458-31777477 | Msa1323440:intron | 25.0% |
| !! | TTTTCATTTGCTTCTTTTTC+TGG | + | chr8_4:31777527-31777546 | None:intergenic | 25.0% |
| ! | ACTCTCTTATCAACAAAAAT+CGG | + | chr8_4:31777734-31777753 | None:intergenic | 25.0% |
| !! | GATAATTTTACCTGATTCAT+TGG | - | chr8_4:31777811-31777830 | Msa1323440:intron | 25.0% |
| ! | TATTTGACAGAATGTTTAAG+TGG | + | chr8_4:31777866-31777885 | None:intergenic | 25.0% |
| !! | TACTCTTTTGTAAATAATGC+CGG | - | chr8_4:31777884-31777903 | Msa1323440:CDS | 25.0% |
| !! | ATTGTTTCTTTCAATTCCTT+TGG | + | chr8_4:31778457-31778476 | None:intergenic | 25.0% |
| ! | TGCTAACCTAAATGAAAAAT+TGG | - | chr8_4:31778550-31778569 | Msa1323440:CDS | 25.0% |
| ! | TTCTTAGTTTAGTTTCTTGG+TGG | + | chr8_4:31771802-31771821 | None:intergenic | 30.0% |
| ! | AATAGTGTGTCATGTTTTTC+AGG | + | chr8_4:31772063-31772082 | None:intergenic | 30.0% |
| ATGATCATCAATAAGAAGGT+AGG | + | chr8_4:31772166-31772185 | None:intergenic | 30.0% | |
| ACAAACATCAAAGATAAACC+AGG | + | chr8_4:31772348-31772367 | None:intergenic | 30.0% | |
| ATAGGTACCATGATTCAAAA+AGG | - | chr8_4:31772995-31773014 | Msa1323440:intron | 30.0% | |
| GACTCATTTCCTTAAAATCA+GGG | + | chr8_4:31773041-31773060 | None:intergenic | 30.0% | |
| AGACTCATTTCCTTAAAATC+AGG | + | chr8_4:31773042-31773061 | None:intergenic | 30.0% | |
| GATATGTGATAGCAATGTAT+TGG | - | chr8_4:31773070-31773089 | Msa1323440:intron | 30.0% | |
| ATTGTGACATTAACTACTAC+TGG | - | chr8_4:31773096-31773115 | Msa1323440:intron | 30.0% | |
| ACATTAACTACTACTGGATA+TGG | - | chr8_4:31773102-31773121 | Msa1323440:intron | 30.0% | |
| GGATTAACAGCTTATATCAT+TGG | - | chr8_4:31773189-31773208 | Msa1323440:intron | 30.0% | |
| !! | TGACAAATCTTGTTGTTCAA+TGG | - | chr8_4:31773217-31773236 | Msa1323440:intron | 30.0% |
| CAAACACACACTAAGTATTA+AGG | + | chr8_4:31773379-31773398 | None:intergenic | 30.0% | |
| CTTAATACTTAGTGTGTGTT+TGG | - | chr8_4:31773377-31773396 | Msa1323440:intron | 30.0% | |
| !! | AAGCTTTGGAGAAATAGAAA+GGG | + | chr8_4:31773696-31773715 | None:intergenic | 30.0% |
| TAGAATGAAATAGTGAGATG+GGG | + | chr8_4:31773790-31773809 | None:intergenic | 30.0% | |
| GTAGAATGAAATAGTGAGAT+GGG | + | chr8_4:31773791-31773810 | None:intergenic | 30.0% | |
| ! | CCTTCAGATTTGTTCTTAAT+TGG | + | chr8_4:31773860-31773879 | None:intergenic | 30.0% |
| CCAATTAAGAACAAATCTGA+AGG | - | chr8_4:31773857-31773876 | Msa1323440:intron | 30.0% | |
| GATGTTTATTCATGGGAAAT+TGG | - | chr8_4:31773989-31774008 | Msa1323440:intron | 30.0% | |
| GGAAATTGGAGAAAAAAACA+TGG | - | chr8_4:31774003-31774022 | Msa1323440:intron | 30.0% | |
| !!! | TTTCTGTTTTGTTTGGATGA+AGG | + | chr8_4:31774164-31774183 | None:intergenic | 30.0% |
| !! | TCCCAATTTTCTGTTTTGTT+TGG | + | chr8_4:31774171-31774190 | None:intergenic | 30.0% |
| CAAAACAGAAAATTGGGAAA+CGG | - | chr8_4:31774173-31774192 | Msa1323440:CDS | 30.0% | |
| ACTTTACATAGTTGGAACTA+AGG | - | chr8_4:31774305-31774324 | Msa1323440:intron | 30.0% | |
| TTACAAGTGTTCAACATACT+TGG | + | chr8_4:31774344-31774363 | None:intergenic | 30.0% | |
| ATATTTACTCTGTCTATTGC+GGG | + | chr8_4:31774372-31774391 | None:intergenic | 30.0% | |
| ATATATATATGTTGGTCGTG+GGG | + | chr8_4:31774481-31774500 | None:intergenic | 30.0% | |
| GGTTAGAATCCTATTCATTA+AGG | - | chr8_4:31774713-31774732 | Msa1323440:intron | 30.0% | |
| ATAGTCTTCCCTTAATGAAT+AGG | + | chr8_4:31774725-31774744 | None:intergenic | 30.0% | |
| ! | ACTTTTTATTCGTGGTTAAC+TGG | + | chr8_4:31775107-31775126 | None:intergenic | 30.0% |
| !!! | CTTTGCTTACTTTTTATTCG+TGG | + | chr8_4:31775115-31775134 | None:intergenic | 30.0% |
| ! | TGGTTACAGTCATAAAGTTT+TGG | + | chr8_4:31775232-31775251 | None:intergenic | 30.0% |
| !! | TTTAATTGCAGGACTGATTT+TGG | + | chr8_4:31775308-31775327 | None:intergenic | 30.0% |
| AAAATCAGTCCTGCAATTAA+AGG | - | chr8_4:31775307-31775326 | Msa1323440:intron | 30.0% | |
| !!! | TTTTGGTTTCCTTTAATTGC+AGG | + | chr8_4:31775319-31775338 | None:intergenic | 30.0% |
| TGGTGGTTTAAATCATTTAG+TGG | - | chr8_4:31775382-31775401 | Msa1323440:intron | 30.0% | |
| GGTGGTTTAAATCATTTAGT+GGG | - | chr8_4:31775383-31775402 | Msa1323440:intron | 30.0% | |
| ! | TATTTTCCTAATTGGGAATG+TGG | - | chr8_4:31775448-31775467 | Msa1323440:intron | 30.0% |
| GTCGTTATGAACTTGTAATA+TGG | + | chr8_4:31775475-31775494 | None:intergenic | 30.0% | |
| TATTACAAGTTCATAACGAC+TGG | - | chr8_4:31775475-31775494 | Msa1323440:intron | 30.0% | |
| !! | TAACTCACATCGATTTAGTT+TGG | + | chr8_4:31775617-31775636 | None:intergenic | 30.0% |
| GAAATCGTGATACATCTTTA+TGG | - | chr8_4:31775722-31775741 | Msa1323440:intron | 30.0% | |
| GAGTTCTCTAAATGACAAAA+AGG | + | chr8_4:31775778-31775797 | None:intergenic | 30.0% | |
| GAAAATCTTGTGAAACTCTT+TGG | + | chr8_4:31776198-31776217 | None:intergenic | 30.0% | |
| TACTTTAGGTGGAAAATACT+CGG | + | chr8_4:31776345-31776364 | None:intergenic | 30.0% | |
| TGTAGCATAACATCTACTTT+AGG | + | chr8_4:31776359-31776378 | None:intergenic | 30.0% | |
| TGATCAATTTAATCTGTTGC+AGG | - | chr8_4:31776490-31776509 | Msa1323440:intron | 30.0% | |
| TACCCTAACATGAATAATTC+AGG | - | chr8_4:31776654-31776673 | Msa1323440:intron | 30.0% | |
| TAATAATACTCTTGTGAGAG+AGG | + | chr8_4:31776909-31776928 | None:intergenic | 30.0% | |
| !! | ATGTTGAATAATGAGTTGGT+CGG | - | chr8_4:31777079-31777098 | Msa1323440:CDS | 30.0% |
| !!! | TTTGTTGTTTCTTTTGACAG+AGG | - | chr8_4:31777333-31777352 | Msa1323440:CDS | 30.0% |
| TTAAGTGGTCAAGAAGATTT+AGG | - | chr8_4:31777356-31777375 | Msa1323440:intron | 30.0% | |
| CAAAACAAGAGTCATGAAAA+TGG | - | chr8_4:31777596-31777615 | Msa1323440:intron | 30.0% | |
| TACTTGCTCCTAAAGAAATT+TGG | + | chr8_4:31777688-31777707 | None:intergenic | 30.0% | |
| !!! | GTTTTTTCCTTTCGATTTGA+TGG | + | chr8_4:31777712-31777731 | None:intergenic | 30.0% |
| ACGTTTCAACAAAATCACAA+TGG | - | chr8_4:31777999-31778018 | Msa1323440:intron | 30.0% | |
| TTTAGTATTATTGTAGGCCT+TGG | + | chr8_4:31778186-31778205 | None:intergenic | 30.0% | |
| ! | GATCATCTGTATTTTCTTTG+CGG | - | chr8_4:31778252-31778271 | Msa1323440:CDS | 30.0% |
| TACCAGTAATTTCGATCGAA+GGG | + | chr8_4:31771839-31771858 | None:intergenic | 35.0% | |
| TTACCAGTAATTTCGATCGA+AGG | + | chr8_4:31771840-31771859 | None:intergenic | 35.0% | |
| TATTTGAACTCTGTCTCTTG+AGG | - | chr8_4:31771885-31771904 | Msa1323440:three_prime_UTR | 35.0% | |
| ATATAATTTCTTGCAGGGCT+TGG | - | chr8_4:31771971-31771990 | Msa1323440:three_prime_UTR | 35.0% | |
| TATAATTTCTTGCAGGGCTT+GGG | - | chr8_4:31771972-31771991 | Msa1323440:three_prime_UTR | 35.0% | |
| GCAGAAAAGCAAATTGAAAG+GGG | + | chr8_4:31772041-31772060 | None:intergenic | 35.0% | |
| GGCAGAAAAGCAAATTGAAA+GGG | + | chr8_4:31772042-31772061 | None:intergenic | 35.0% | |
| AGGCAGAAAAGCAAATTGAA+AGG | + | chr8_4:31772043-31772062 | None:intergenic | 35.0% | |
| CATCAATAAGAAGGTAGGAA+TGG | + | chr8_4:31772161-31772180 | None:intergenic | 35.0% | |
| CAAAGATAAACCAGGTACAT+AGG | + | chr8_4:31772340-31772359 | None:intergenic | 35.0% | |
| TTCTTGACATGCTTCGTTTA+TGG | - | chr8_4:31772435-31772454 | Msa1323440:intron | 35.0% | |
| AAGTTATGCGGCTGTAATTT+GGG | + | chr8_4:31772660-31772679 | None:intergenic | 35.0% | |
| AAAGTTATGCGGCTGTAATT+TGG | + | chr8_4:31772661-31772680 | None:intergenic | 35.0% | |
| ! | ACATTCGCTGGAATTACTTT+TGG | - | chr8_4:31772753-31772772 | Msa1323440:CDS | 35.0% |
| ATAGAATTACCTCCGTTAGA+AGG | + | chr8_4:31772848-31772867 | None:intergenic | 35.0% | |
| ACCATGATTCAAAAAGGACA+TGG | - | chr8_4:31773001-31773020 | Msa1323440:intron | 35.0% | |
| ! | TCCATGTCCTTTTTGAATCA+TGG | + | chr8_4:31773005-31773024 | None:intergenic | 35.0% |
| GATTCAAAAAGGACATGGAT+TGG | - | chr8_4:31773006-31773025 | Msa1323440:intron | 35.0% | |
| ! | TTCAGTGTACCCTGATTTTA+AGG | - | chr8_4:31773029-31773048 | Msa1323440:intron | 35.0% |
| ! | CAAGAGATGTTGTTTGACAT+TGG | - | chr8_4:31773147-31773166 | Msa1323440:intron | 35.0% |
| TGGATACATGTTGTTCAACT+TGG | - | chr8_4:31773167-31773186 | Msa1323440:intron | 35.0% | |
| GGATACATGTTGTTCAACTT+GGG | - | chr8_4:31773168-31773187 | Msa1323440:intron | 35.0% | |
| TACTTAGTGTGTGTTTGGTA+TGG | - | chr8_4:31773382-31773401 | Msa1323440:intron | 35.0% | |
| ATCTCAAGAGTGACACAAAT+TGG | + | chr8_4:31773663-31773682 | None:intergenic | 35.0% | |
| !! | GAAGCTTTGGAGAAATAGAA+AGG | + | chr8_4:31773697-31773716 | None:intergenic | 35.0% |
| ! | GTAGAAGTGTATTGAAGCTT+TGG | + | chr8_4:31773710-31773729 | None:intergenic | 35.0% |
| GGTAGAATGAAATAGTGAGA+TGG | + | chr8_4:31773792-31773811 | None:intergenic | 35.0% | |
| TGTTCTTAATTGGTGAGTGA+TGG | + | chr8_4:31773821-31773840 | None:intergenic | 35.0% | |
| TGTTCTTAATTGGTGAGTGA+TGG | + | chr8_4:31773821-31773840 | None:intergenic | 35.0% | |
| GCACATCACTTTAAGTAGTA+AGG | + | chr8_4:31773923-31773942 | None:intergenic | 35.0% | |
| TTGTTTGGATGAAGGAAAAG+TGG | + | chr8_4:31774156-31774175 | None:intergenic | 35.0% | |
| TTGGAACTAAGGATGACAAT+TGG | - | chr8_4:31774316-31774335 | Msa1323440:intron | 35.0% | |
| TATATTTATGGGTCCGAGTT+CGG | - | chr8_4:31774393-31774412 | Msa1323440:intron | 35.0% | |
| ! | TGTTACTTAATGCACTGAGT+AGG | + | chr8_4:31774826-31774845 | None:intergenic | 35.0% |
| CAAAGTCCGGATTTATTCTA+AGG | + | chr8_4:31774853-31774872 | None:intergenic | 35.0% | |
| CTTAGAATAAATCCGGACTT+TGG | - | chr8_4:31774851-31774870 | Msa1323440:intron | 35.0% | |
| TCGTGGTTAACTGGTATTTA+TGG | + | chr8_4:31775098-31775117 | None:intergenic | 35.0% | |
| !!! | GCATTTATTTTGTCGTGTAG+TGG | - | chr8_4:31775362-31775381 | Msa1323440:intron | 35.0% |
| !!! | TTTATTTTGTCGTGTAGTGG+TGG | - | chr8_4:31775365-31775384 | Msa1323440:intron | 35.0% |
| TGGGTATAACATGGTTCATA+TGG | + | chr8_4:31775410-31775429 | None:intergenic | 35.0% | |
| AAATTTGGACCAATGTCAGT+GGG | + | chr8_4:31775429-31775448 | None:intergenic | 35.0% | |
| TAAATTTGGACCAATGTCAG+TGG | + | chr8_4:31775430-31775449 | None:intergenic | 35.0% | |
| AAACCAAACCATTGTAGACT+TGG | + | chr8_4:31775567-31775586 | None:intergenic | 35.0% | |
| CGATATTTAAGCAACTCACT+CGG | - | chr8_4:31775747-31775766 | Msa1323440:intron | 35.0% | |
| TGTCTCAAGTTCAAAACAGA+AGG | - | chr8_4:31776073-31776092 | Msa1323440:intron | 35.0% | |
| GCACAACAGGATAAAAAAGA+TGG | + | chr8_4:31776159-31776178 | None:intergenic | 35.0% | |
| AGCATAACATCTACTTTAGG+TGG | + | chr8_4:31776356-31776375 | None:intergenic | 35.0% | |
| TCCAACAGATCTATACATGT+TGG | - | chr8_4:31776388-31776407 | Msa1323440:intron | 35.0% | |
| ACCAACATGTATAGATCTGT+TGG | + | chr8_4:31776392-31776411 | None:intergenic | 35.0% | |
| GAAGATACATTTGGAGAGAT+TGG | - | chr8_4:31776697-31776716 | Msa1323440:intron | 35.0% | |
| !! | ATTATAATTGGTGCTGCTTC+TGG | + | chr8_4:31776826-31776845 | None:intergenic | 35.0% |
| !! | TAATGAGTTGATCGGTCATT+AGG | + | chr8_4:31777182-31777201 | None:intergenic | 35.0% |
| ! | TTCTTTTGACAGAGGTTAAG+TGG | - | chr8_4:31777341-31777360 | Msa1323440:CDS | 35.0% |
| !! | GGTCAAGAAGATTTAGGTTT+TGG | - | chr8_4:31777362-31777381 | Msa1323440:intron | 35.0% |
| TCATGAAGAGACAATCTAGT+AGG | + | chr8_4:31777395-31777414 | None:intergenic | 35.0% | |
| TTGTCTCTTCATGACATACA+TGG | - | chr8_4:31777401-31777420 | Msa1323440:intron | 35.0% | |
| !! | GGCTGATTTTCAATCATGTT+AGG | + | chr8_4:31777506-31777525 | None:intergenic | 35.0% |
| TCTTTCTGTTTCCATCTAAC+AGG | + | chr8_4:31777560-31777579 | None:intergenic | 35.0% | |
| AAATTTGGTCACTCCTAACA+TGG | + | chr8_4:31777673-31777692 | None:intergenic | 35.0% | |
| AGGAGTGACCAAATTTCTTT+AGG | - | chr8_4:31777677-31777696 | Msa1323440:intron | 35.0% | |
| CAAGTAACCATCAAATCGAA+AGG | - | chr8_4:31777702-31777721 | Msa1323440:intron | 35.0% | |
| AGAGTTACCATTCACTATGT+AGG | - | chr8_4:31777749-31777768 | Msa1323440:intron | 35.0% | |
| ACCAAGTTACAAGGAAAACA+TGG | - | chr8_4:31777782-31777801 | Msa1323440:intron | 35.0% | |
| CCAAGTTACAAGGAAAACAT+GGG | - | chr8_4:31777783-31777802 | Msa1323440:intron | 35.0% | |
| ATAAAACTCTACCTAGACAC+CGG | + | chr8_4:31777906-31777925 | None:intergenic | 35.0% | |
| !!! | TGTCGCTTTTGTCAAAATCA+AGG | + | chr8_4:31777974-31777993 | None:intergenic | 35.0% |
| GTTCAAATGTTTAGCGAGTT+TGG | + | chr8_4:31778038-31778057 | None:intergenic | 35.0% | |
| CTATCAATTTGTGAAACTGC+AGG | - | chr8_4:31778144-31778163 | Msa1323440:CDS | 35.0% | |
| CATAATGAATGCACAACCAA+AGG | - | chr8_4:31778438-31778457 | Msa1323440:intron | 35.0% | |
| !! | TGGGTTGATGATTTCCAAAC+TGG | - | chr8_4:31771749-31771768 | Msa1323440:three_prime_UTR | 40.0% |
| ACCAGTAATTTCGATCGAAG+GGG | + | chr8_4:31771838-31771857 | None:intergenic | 40.0% | |
| TTCTAGTGCTTTACTCTGCA+TGG | - | chr8_4:31772010-31772029 | Msa1323440:CDS | 40.0% | |
| ! | ATTTCAGGTACCTATGTACC+TGG | - | chr8_4:31772327-31772346 | Msa1323440:intron | 40.0% |
| ATGGAGCTAATGGTTTGAAG+AGG | + | chr8_4:31772380-31772399 | None:intergenic | 40.0% | |
| ATCGGTGAATATGGAGCTAA+TGG | + | chr8_4:31772390-31772409 | None:intergenic | 40.0% | |
| TCTACAACGCGATTAAGTGT+AGG | + | chr8_4:31772612-31772631 | None:intergenic | 40.0% | |
| ! | AACTGTGCTTTCGAGTATCA+CGG | - | chr8_4:31772687-31772706 | Msa1323440:CDS | 40.0% |
| AGGCTGAAAGAACAAATTCG+AGG | + | chr8_4:31772725-31772744 | None:intergenic | 40.0% | |
| ! | TCCAGCGAATGTTTTTCTCA+AGG | + | chr8_4:31772745-31772764 | None:intergenic | 40.0% |
| TCGATGCTTAAAGCTCATTG+CGG | - | chr8_4:31772778-31772797 | Msa1323440:CDS | 40.0% | |
| AAATAGGTTCCTTCTAACGG+AGG | - | chr8_4:31772836-31772855 | Msa1323440:CDS | 40.0% | |
| TTAGTGTGTGTTTGGTATGG+CGG | - | chr8_4:31773385-31773404 | Msa1323440:intron | 40.0% | |
| GTGGAGAAGAAGATGGAAAT+GGG | + | chr8_4:31773732-31773751 | None:intergenic | 40.0% | |
| ATGAAATAGTGAGATGGGGA+AGG | + | chr8_4:31773786-31773805 | None:intergenic | 40.0% | |
| ! | ATTGGTGAGTGATGGAGAAA+TGG | + | chr8_4:31773813-31773832 | None:intergenic | 40.0% |
| ! | AATTCCAGCTTTAGCAGAAC+CGG | - | chr8_4:31774099-31774118 | Msa1323440:CDS | 40.0% |
| !! | ACGTTTTAGATCCAAAACGC+CGG | + | chr8_4:31774121-31774140 | None:intergenic | 40.0% |
| TGACAAAGTAAACCCACGTT+TGG | - | chr8_4:31774200-31774219 | Msa1323440:CDS | 40.0% | |
| GACAAAGTAAACCCACGTTT+GGG | - | chr8_4:31774201-31774220 | Msa1323440:CDS | 40.0% | |
| ! | TGTTTTCACAACCCAAACGT+GGG | + | chr8_4:31774215-31774234 | None:intergenic | 40.0% |
| ! | ATGTTTTCACAACCCAAACG+TGG | + | chr8_4:31774216-31774235 | None:intergenic | 40.0% |
| ATATTTATGGGTCCGAGTTC+GGG | - | chr8_4:31774394-31774413 | Msa1323440:intron | 40.0% | |
| TGTGTGTAATTACCCGAACT+CGG | + | chr8_4:31774409-31774428 | None:intergenic | 40.0% | |
| CCTCATATGTAAGATTCACG+CGG | + | chr8_4:31775149-31775168 | None:intergenic | 40.0% | |
| AGGCTTGACAACTAATGACT+TGG | + | chr8_4:31775252-31775271 | None:intergenic | 40.0% | |
| CAATGTCAGTGGGTATAACA+TGG | + | chr8_4:31775419-31775438 | None:intergenic | 40.0% | |
| CATGTTATACCCACTGACAT+TGG | - | chr8_4:31775417-31775436 | Msa1323440:intron | 40.0% | |
| TATGGTCCACATTCCCAATT+AGG | + | chr8_4:31775457-31775476 | None:intergenic | 40.0% | |
| ! | TAACGACTGGCACATGTTTT+TGG | - | chr8_4:31775488-31775507 | Msa1323440:intron | 40.0% |
| !!! | ACTGGCACATGTTTTTGGTA+GGG | - | chr8_4:31775493-31775512 | Msa1323440:intron | 40.0% |
| ! | CAAACCATTGTAGACTTGGT+CGG | + | chr8_4:31775563-31775582 | None:intergenic | 40.0% |
| ! | TTGGACAGCTCACATTTTGT+TGG | + | chr8_4:31775642-31775661 | None:intergenic | 40.0% |
| ATTTGATCCTGTGTCTCATG+AGG | + | chr8_4:31776040-31776059 | None:intergenic | 40.0% | |
| ! | TGAAACTCTTTGGAAGAGGT+AGG | + | chr8_4:31776188-31776207 | None:intergenic | 40.0% |
| ! | CTTGTGAAACTCTTTGGAAG+AGG | + | chr8_4:31776192-31776211 | None:intergenic | 40.0% |
| ! | GATCTATACATGTTGGTCTC+AGG | - | chr8_4:31776395-31776414 | Msa1323440:intron | 40.0% |
| GCAAGTGCAGAAGATACATT+TGG | - | chr8_4:31776688-31776707 | Msa1323440:intron | 40.0% | |
| AGCAACAACCTTTCACTGTT+AGG | - | chr8_4:31776734-31776753 | Msa1323440:intron | 40.0% | |
| TCTTTGGTCCTAACAGTGAA+AGG | + | chr8_4:31776745-31776764 | None:intergenic | 40.0% | |
| ! | TGCTTCTGGATTTGCTTGTA+AGG | + | chr8_4:31776812-31776831 | None:intergenic | 40.0% |
| TGAAGAGACAATCTAGTAGG+TGG | + | chr8_4:31777392-31777411 | None:intergenic | 40.0% | |
| TCTCTTCATGACATACATGG+TGG | - | chr8_4:31777404-31777423 | Msa1323440:intron | 40.0% | |
| ! | TACATGGTGGAAACAACACA+AGG | - | chr8_4:31777417-31777436 | Msa1323440:intron | 40.0% |
| AGAAGCTAAGTCCTGTTAGA+TGG | - | chr8_4:31777546-31777565 | Msa1323440:intron | 40.0% | |
| CAGATAACCTTAGCCATGTT+AGG | - | chr8_4:31777657-31777676 | Msa1323440:intron | 40.0% | |
| GTCTTGTCCTACATAGTGAA+TGG | + | chr8_4:31777759-31777778 | None:intergenic | 40.0% | |
| CAAGACAGAACCAAGTTACA+AGG | - | chr8_4:31777773-31777792 | Msa1323440:intron | 40.0% | |
| ! | CCCATGTTTTCCTTGTAACT+TGG | + | chr8_4:31777786-31777805 | None:intergenic | 40.0% |
| TGTAAATAATGCCGGTGTCT+AGG | - | chr8_4:31777892-31777911 | Msa1323440:CDS | 40.0% | |
| TAGCGAGTTTGGCAAAATCA+CGG | + | chr8_4:31778027-31778046 | None:intergenic | 40.0% | |
| GAAACTGCAGGAGAAAAGTT+TGG | - | chr8_4:31778156-31778175 | Msa1323440:CDS | 40.0% | |
| !! | ATCAAACTTGTTGCTAGCTC+TGG | - | chr8_4:31778493-31778512 | Msa1323440:CDS | 40.0% |
| GAGATGGCAAGATACCAGTT+TGG | + | chr8_4:31771766-31771785 | None:intergenic | 45.0% | |
| ACTGGTATCTTGCCATCTCT+TGG | - | chr8_4:31771767-31771786 | Msa1323440:three_prime_UTR | 45.0% | |
| CCAGTAATTTCGATCGAAGG+GGG | + | chr8_4:31771837-31771856 | None:intergenic | 45.0% | |
| CGTAACACTATGTCGACACA+TGG | - | chr8_4:31771923-31771942 | Msa1323440:three_prime_UTR | 45.0% | |
| GCTGCTATGATCGGTGAATA+TGG | + | chr8_4:31772399-31772418 | None:intergenic | 45.0% | |
| TCCAAACTCGCTGCTATGAT+CGG | + | chr8_4:31772408-31772427 | None:intergenic | 45.0% | |
| GAGTCAGTTCTCTCTTTGCA+AGG | - | chr8_4:31772468-31772487 | Msa1323440:CDS | 45.0% | |
| ! | AATTTGGGTTTGCGACAGCA+AGG | + | chr8_4:31772645-31772664 | None:intergenic | 45.0% |
| GCCTTGAGAAAAACATTCGC+TGG | - | chr8_4:31772741-31772760 | Msa1323440:CDS | 45.0% | |
| AGCACAGTGTACTGCAAACA+AGG | + | chr8_4:31772950-31772969 | None:intergenic | 45.0% | |
| TTGTTTGCAGTACACTGTGC+TGG | - | chr8_4:31772949-31772968 | Msa1323440:intron | 45.0% | |
| TTATTGGGTTTGGGCTGTGT+TGG | + | chr8_4:31773617-31773636 | None:intergenic | 45.0% | |
| GGTGGAGAAGAAGATGGAAA+TGG | + | chr8_4:31773733-31773752 | None:intergenic | 45.0% | |
| !! | AGAAGAGTTGGTGAAGTGAG+AGG | + | chr8_4:31773754-31773773 | None:intergenic | 45.0% |
| AGGAGAAAGGCTAGAAGAGT+TGG | + | chr8_4:31773766-31773785 | None:intergenic | 45.0% | |
| GCTGGAATTCAAAGCTTCTG+CGG | + | chr8_4:31774088-31774107 | None:intergenic | 45.0% | |
| !! | GGCGTTTTGGATCTAAAACG+TGG | - | chr8_4:31774120-31774139 | Msa1323440:CDS | 45.0% |
| ATATATGTTGGTCGTGGGGA+GGG | + | chr8_4:31774477-31774496 | None:intergenic | 45.0% | |
| TATATATGTTGGTCGTGGGG+AGG | + | chr8_4:31774478-31774497 | None:intergenic | 45.0% | |
| GTGATTGAGACTCCAAAGTC+CGG | + | chr8_4:31774866-31774885 | None:intergenic | 45.0% | |
| CCGCGTGAATCTTACATATG+AGG | - | chr8_4:31775146-31775165 | Msa1323440:intron | 45.0% | |
| !!! | GACTGGCACATGTTTTTGGT+AGG | - | chr8_4:31775492-31775511 | Msa1323440:intron | 45.0% |
| GATACCGACCAAGTCTACAA+TGG | - | chr8_4:31775556-31775575 | Msa1323440:intron | 45.0% | |
| CGACCAAGTCTACAATGGTT+TGG | - | chr8_4:31775561-31775580 | Msa1323440:intron | 45.0% | |
| TCATCTACCTCATGAGACAC+AGG | - | chr8_4:31776030-31776049 | Msa1323440:intron | 45.0% | |
| ! | ATGCTTGCGCGAATTGCTTT+TGG | + | chr8_4:31776130-31776149 | None:intergenic | 45.0% |
| AGGTAGGATTTCTGCACAAC+AGG | + | chr8_4:31776172-31776191 | None:intergenic | 45.0% | |
| ! | GATCTCATTCGCAGTGTTGA+TGG | - | chr8_4:31776512-31776531 | Msa1323440:intron | 45.0% |
| !! | ATAATGAGTTGGTCGGTCAC+TGG | - | chr8_4:31777086-31777105 | Msa1323440:CDS | 45.0% |
| TGATCGGTCATTAGGTGATG+TGG | + | chr8_4:31777174-31777193 | None:intergenic | 45.0% | |
| AGCAGCTCATCCAATGAATC+AGG | + | chr8_4:31777824-31777843 | None:intergenic | 45.0% | |
| GATGAGCTGCTCAAGATTGT+TGG | - | chr8_4:31777833-31777852 | Msa1323440:CDS | 45.0% | |
| ACTGCAGGAGAAAAGTTTGG+AGG | - | chr8_4:31778159-31778178 | Msa1323440:CDS | 45.0% | |
| CTGCAGGAGAAAAGTTTGGA+GGG | - | chr8_4:31778160-31778179 | Msa1323440:CDS | 45.0% | |
| ! | GACCTTTGTGTCATTCGAGA+CGG | - | chr8_4:31778228-31778247 | Msa1323440:CDS | 45.0% |
| !!! | TTTTATTTTTGTTTTTAAAT+AGG | - | chr8_4:31772820-31772839 | Msa1323440:CDS | 5.0% |
| !! | ATATATATATATATATATGT+TGG | + | chr8_4:31774489-31774508 | None:intergenic | 5.0% |
| !!! | AATAAAAATAAAATTTTTTG+AGG | + | chr8_4:31774661-31774680 | None:intergenic | 5.0% |
| !!! | TTAATAGTATATTTTTAAAT+TGG | - | chr8_4:31775023-31775042 | Msa1323440:intron | 5.0% |
| TGGACTCTTGCTCCAAGAGA+TGG | + | chr8_4:31771782-31771801 | None:intergenic | 50.0% | |
| CCCCCTTCGATCGAAATTAC+TGG | - | chr8_4:31771834-31771853 | Msa1323440:three_prime_UTR | 50.0% | |
| ACCGATCATAGCAGCGAGTT+TGG | - | chr8_4:31772404-31772423 | Msa1323440:intron | 50.0% | |
| GTGAGAGGTGGAGAAGAAGA+TGG | + | chr8_4:31773739-31773758 | None:intergenic | 50.0% | |
| !! | AGAGTTGGTGAAGTGAGAGG+TGG | + | chr8_4:31773751-31773770 | None:intergenic | 50.0% |
| AGTGAGATGGGGAAGGAGAA+AGG | + | chr8_4:31773779-31773798 | None:intergenic | 50.0% | |
| ! | CTTTAGCAGAACCGGCGTTT+TGG | - | chr8_4:31774107-31774126 | Msa1323440:CDS | 50.0% |
| ! | CATGTTGGTCTCAGGATCAG+TGG | - | chr8_4:31776403-31776422 | Msa1323440:intron | 50.0% |
| GGTCACTCCTAACATGGCTA+AGG | + | chr8_4:31777667-31777686 | None:intergenic | 50.0% | |
| GAGAAAAGTTTGGAGGGCCA+AGG | - | chr8_4:31778166-31778185 | Msa1323440:CDS | 50.0% | |
| CACCGTCTCGAATGACACAA+AGG | + | chr8_4:31778233-31778252 | None:intergenic | 50.0% | |
| ATACTCGGTTCACGTGTGAG+TGG | - | chr8_4:31778579-31778598 | Msa1323440:exon | 50.0% | |
| GTGTGTGTTTGGTATGGCGG+CGG | - | chr8_4:31773388-31773407 | Msa1323440:intron | 55.0% | |
| !! | AACGCCGGTTCTGCTAAAGC+TGG | + | chr8_4:31774106-31774125 | None:intergenic | 55.0% |
| CTTGCAGGGCTTGGGACAAG+TGG | - | chr8_4:31771980-31771999 | Msa1323440:three_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 31771698 | 31778606 | 31771698 | ID=Msa1323440;Name=Msa1323440 |
| chr8_4 | mRNA | 31771698 | 31778606 | 31771698 | ID=Msa1323440-mRNA-1;Parent=Msa1323440;Name=Msa1323440-mRNA-1;_AED=0.08;_eAED=0.08;_QI=12|0.8|0.90|0.90|0.8|0.90|11|310|680 |
| chr8_4 | exon | 31771698 | 31772138 | 31771698 | ID=Msa1323440-mRNA-1:exon:10335;Parent=Msa1323440-mRNA-1 |
| chr8_4 | exon | 31772450 | 31772951 | 31772450 | ID=Msa1323440-mRNA-1:exon:10334;Parent=Msa1323440-mRNA-1 |
| chr8_4 | exon | 31773443 | 31773628 | 31773443 | ID=Msa1323440-mRNA-1:exon:10333;Parent=Msa1323440-mRNA-1 |
| chr8_4 | exon | 31773760 | 31773792 | 31773760 | ID=Msa1323440-mRNA-1:exon:10332;Parent=Msa1323440-mRNA-1 |
| chr8_4 | exon | 31773880 | 31773978 | 31773880 | ID=Msa1323440-mRNA-1:exon:10331;Parent=Msa1323440-mRNA-1 |
| chr8_4 | exon | 31774076 | 31774315 | 31774076 | ID=Msa1323440-mRNA-1:exon:10330;Parent=Msa1323440-mRNA-1 |
| chr8_4 | exon | 31777044 | 31777361 | 31777044 | ID=Msa1323440-mRNA-1:exon:10329;Parent=Msa1323440-mRNA-1 |
| chr8_4 | exon | 31777447 | 31777462 | 31777447 | ID=Msa1323440-mRNA-1:exon:10328;Parent=Msa1323440-mRNA-1 |
| chr8_4 | exon | 31777815 | 31777970 | 31777815 | ID=Msa1323440-mRNA-1:exon:10327;Parent=Msa1323440-mRNA-1 |
| chr8_4 | exon | 31778102 | 31778317 | 31778102 | ID=Msa1323440-mRNA-1:exon:10326;Parent=Msa1323440-mRNA-1 |
| chr8_4 | exon | 31778449 | 31778606 | 31778449 | ID=Msa1323440-mRNA-1:exon:10325;Parent=Msa1323440-mRNA-1 |
| chr8_4 | five_prime_UTR | 31778595 | 31778606 | 31778595 | ID=Msa1323440-mRNA-1:five_prime_utr;Parent=Msa1323440-mRNA-1 |
| chr8_4 | CDS | 31778449 | 31778594 | 31778449 | ID=Msa1323440-mRNA-1:cds;Parent=Msa1323440-mRNA-1 |
| chr8_4 | CDS | 31778102 | 31778317 | 31778102 | ID=Msa1323440-mRNA-1:cds;Parent=Msa1323440-mRNA-1 |
| chr8_4 | CDS | 31777815 | 31777970 | 31777815 | ID=Msa1323440-mRNA-1:cds;Parent=Msa1323440-mRNA-1 |
| chr8_4 | CDS | 31777447 | 31777462 | 31777447 | ID=Msa1323440-mRNA-1:cds;Parent=Msa1323440-mRNA-1 |
| chr8_4 | CDS | 31777044 | 31777361 | 31777044 | ID=Msa1323440-mRNA-1:cds;Parent=Msa1323440-mRNA-1 |
| chr8_4 | CDS | 31774076 | 31774315 | 31774076 | ID=Msa1323440-mRNA-1:cds;Parent=Msa1323440-mRNA-1 |
| chr8_4 | CDS | 31773880 | 31773978 | 31773880 | ID=Msa1323440-mRNA-1:cds;Parent=Msa1323440-mRNA-1 |
| chr8_4 | CDS | 31773760 | 31773792 | 31773760 | ID=Msa1323440-mRNA-1:cds;Parent=Msa1323440-mRNA-1 |
| chr8_4 | CDS | 31773443 | 31773628 | 31773443 | ID=Msa1323440-mRNA-1:cds;Parent=Msa1323440-mRNA-1 |
| chr8_4 | CDS | 31772450 | 31772951 | 31772450 | ID=Msa1323440-mRNA-1:cds;Parent=Msa1323440-mRNA-1 |
| chr8_4 | CDS | 31772008 | 31772138 | 31772008 | ID=Msa1323440-mRNA-1:cds;Parent=Msa1323440-mRNA-1 |
| chr8_4 | three_prime_UTR | 31771698 | 31772007 | 31771698 | ID=Msa1323440-mRNA-1:three_prime_utr;Parent=Msa1323440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
