AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0721150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0721150 MtrunA17_Chr5g0412101 94.316 475 27 0 1 475 1 475 0.0 896
Msa0721150 MtrunA17_Chr5g0412131 85.263 475 69 1 1 475 1 474 0.0 826
Msa0721150 MtrunA17_Chr5g0412111 77.516 467 101 2 10 475 3 466 0.0 763
Msa0721150 MtrunA17_Chr5g0426431 38.494 478 271 11 8 470 8 477 1.24e-94 294
Msa0721150 MtrunA17_Chr6g0454141 35.185 486 272 11 12 470 10 479 5.21e-94 293
Msa0721150 MtrunA17_Chr3g0092641 37.917 480 271 12 8 470 8 477 5.78e-94 292
Msa0721150 MtrunA17_Chr6g0454181 34.623 491 276 12 8 470 6 479 1.58e-90 284
Msa0721150 MtrunA17_Chr6g0454131 35.934 487 270 10 8 468 6 476 4.32e-90 283
Msa0721150 MtrunA17_Chr6g0454121 35.113 487 274 11 8 468 6 476 4.65e-90 283
Msa0721150 MtrunA17_Chr6g0454261 33.333 489 287 12 7 470 5 479 5.50e-90 282
Msa0721150 MtrunA17_Chr6g0454291 35.992 489 270 11 9 470 4 476 6.11e-90 282
Msa0721150 MtrunA17_Chr2g0278711 36.998 473 277 10 12 470 11 476 7.12e-90 282
Msa0721150 MtrunA17_Chr4g0050341 34.898 490 282 11 7 471 14 491 1.65e-89 281
Msa0721150 MtrunA17_Chr7g0217881 36.268 477 261 12 12 470 10 461 2.62e-89 280
Msa0721150 MtrunA17_Chr6g0454401 34.238 479 287 10 12 470 10 480 3.27e-89 280
Msa0721150 MtrunA17_Chr6g0454331 34.298 484 287 12 9 470 4 478 5.47e-89 280
Msa0721150 MtrunA17_Chr6g0454191 35.417 480 280 12 12 470 10 480 2.97e-88 278
Msa0721150 MtrunA17_Chr3g0118671 35.685 482 273 13 12 470 6 473 4.88e-88 277
Msa0721150 MtrunA17_Chr6g0453961 33.196 485 292 11 8 470 15 489 8.94e-88 277
Msa0721150 MtrunA17_Chr3g0118661 36.076 474 277 11 12 468 13 477 1.95e-87 276
Msa0721150 MtrunA17_Chr3g0118691 35.833 480 275 12 12 470 15 482 3.81e-87 275
Msa0721150 MtrunA17_Chr8g0359821 34.096 481 282 11 12 470 10 477 6.29e-87 275
Msa0721150 MtrunA17_Chr3g0118771 34.783 483 272 12 12 468 21 486 1.27e-85 271
Msa0721150 MtrunA17_Chr6g0452771 35.438 491 272 11 8 470 6 479 1.62e-85 271
Msa0721150 MtrunA17_Chr6g0454361 34.519 478 282 10 12 468 11 478 2.40e-85 270
Msa0721150 MtrunA17_Chr6g0454301 34.728 478 283 11 12 470 263 730 4.79e-85 276
Msa0721150 MtrunA17_Chr6g0454301 40.870 230 129 4 242 468 2 227 6.41e-51 184
Msa0721150 MtrunA17_Chr6g0453951 32.500 480 293 10 12 470 57 526 7.76e-84 268
Msa0721150 MtrunA17_Chr5g0423981 34.402 468 273 11 8 470 6 444 1.16e-83 265
Msa0721150 MtrunA17_Chr3g0078841 33.820 479 288 12 9 468 7 475 2.94e-83 265
Msa0721150 MtrunA17_Chr3g0118701 35.158 475 281 13 12 468 15 480 3.72e-83 265
Msa0721150 MtrunA17_Chr8g0336331 33.264 478 291 10 11 470 9 476 1.08e-82 263
Msa0721150 MtrunA17_Chr6g0454201 34.433 485 287 11 7 470 6 480 2.61e-82 263
Msa0721150 MtrunA17_Chr3g0118711 33.742 489 296 14 1 470 1 480 6.78e-82 261
Msa0721150 MtrunA17_Chr6g0454211 34.908 487 272 13 12 470 297 766 8.00e-82 268
Msa0721150 MtrunA17_Chr6g0454211 33.840 263 135 5 132 389 8 236 1.41e-40 155
Msa0721150 MtrunA17_Chr6g0454341 32.919 483 285 12 12 470 10 477 4.38e-80 256
Msa0721150 MtrunA17_Chr6g0454151 33.401 491 282 11 7 470 5 477 9.73e-80 256
Msa0721150 MtrunA17_Chr6g0454351 32.510 486 268 13 12 470 12 464 4.74e-79 253
Msa0721150 MtrunA17_Chr6g0454321 32.770 473 279 11 12 460 10 467 8.75e-77 253
Msa0721150 MtrunA17_Chr3g0118751 32.917 480 256 12 12 468 6 442 1.24e-74 241
Msa0721150 MtrunA17_Chr3g0112771 32.640 481 287 13 1 472 1 453 2.90e-72 236
Msa0721150 MtrunA17_Chr3g0112761 33.540 483 276 13 6 474 2 453 4.63e-72 235
Msa0721150 MtrunA17_Chr5g0426401 41.118 304 167 8 173 470 13 310 1.08e-68 222
Msa0721150 MtrunA17_Chr6g0454271 37.762 286 173 3 187 470 4 286 1.78e-67 218
Msa0721150 MtrunA17_Chr6g0454251 34.483 406 222 12 12 390 7 395 1.29e-66 219
Msa0721150 MtrunA17_Chr4g0032331 32.311 489 276 15 1 472 1 451 6.92e-66 219
Msa0721150 MtrunA17_Chr8g0380531 32.990 485 284 15 4 473 2 460 2.90e-63 212
Msa0721150 MtrunA17_Chr3g0118721 36.934 287 171 5 190 470 7 289 5.51e-60 198
Msa0721150 MtrunA17_Chr6g0464871 32.008 478 268 15 11 467 22 463 1.11e-59 203
Msa0721150 MtrunA17_Chr7g0249981 30.309 485 274 16 12 474 25 467 2.67e-58 199
Msa0721150 MtrunA17_Chr5g0414321 31.762 488 263 18 12 473 11 454 9.73e-58 197
Msa0721150 MtrunA17_Chr5g0414331 31.557 488 264 17 12 473 13 456 1.38e-57 197
Msa0721150 MtrunA17_Chr7g0250001 29.350 477 278 15 12 467 6 444 3.09e-55 191
Msa0721150 MtrunA17_Chr8g0366391 30.992 484 298 17 12 472 9 479 3.86e-55 191
Msa0721150 MtrunA17_Chr6g0464841 31.458 480 268 16 11 467 10 451 8.90e-55 189
Msa0721150 MtrunA17_Chr6g0454221 41.739 230 128 4 242 468 2 228 2.73e-54 184
Msa0721150 MtrunA17_Chr7g0218831 30.064 469 281 11 12 469 6 438 1.05e-53 186
Msa0721150 MtrunA17_Chr1g0207981 31.911 492 284 21 8 473 9 475 3.13e-53 186
Msa0721150 MtrunA17_Chr6g0464921 29.522 481 296 15 1 467 1 452 5.29e-53 185
Msa0721150 MtrunA17_Chr3g0121991 30.928 485 291 13 12 470 79 545 8.85e-53 186
Msa0721150 MtrunA17_Chr7g0218841 31.013 474 271 15 12 469 6 439 9.72e-53 184
Msa0721150 MtrunA17_Chr6g0464881 30.149 471 284 16 12 467 11 451 1.48e-52 184
Msa0721150 MtrunA17_Chr6g0454171 35.897 273 148 6 205 470 57 309 1.52e-52 179
Msa0721150 MtrunA17_Chr1g0207861 29.814 483 305 13 8 472 4 470 3.30e-52 183
Msa0721150 MtrunA17_Chr8g0355011 31.507 365 192 9 115 470 46 361 1.54e-51 178
Msa0721150 MtrunA17_Chr5g0401721 28.364 483 288 15 8 459 4 459 7.87e-51 179
Msa0721150 MtrunA17_Chr7g0218811 29.449 472 281 15 12 469 15 448 6.27e-50 176
Msa0721150 MtrunA17_Chr8g0377921 27.733 494 286 15 13 470 5 463 8.96e-50 176
Msa0721150 MtrunA17_Chr6g0464861 29.878 492 278 19 1 467 1 450 9.18e-50 176
Msa0721150 MtrunA17_Chr5g0429711 30.505 495 274 20 10 473 9 464 1.73e-49 176
Msa0721150 MtrunA17_Chr8g0347281 28.942 501 297 18 3 475 9 478 1.33e-48 173
Msa0721150 MtrunA17_Chr7g0218821 29.106 481 286 13 12 471 5 451 1.41e-48 172
Msa0721150 MtrunA17_Chr7g0249931 28.131 487 302 16 1 472 29 482 1.74e-48 173
Msa0721150 MtrunA17_Chr1g0161351 28.423 482 303 13 12 471 37 498 4.54e-48 172
Msa0721150 MtrunA17_Chr1g0207971 27.859 481 300 11 8 471 4 454 4.63e-48 171
Msa0721150 MtrunA17_Chr4g0044511 28.684 509 291 18 3 472 31 506 4.87e-48 172
Msa0721150 MtrunA17_Chr8g0365811 28.542 487 308 12 8 472 491 959 6.63e-48 177
Msa0721150 MtrunA17_Chr8g0365811 28.571 420 267 11 12 414 9 412 2.63e-42 160
Msa0721150 MtrunA17_Chr3g0098111 28.184 479 310 12 12 472 9 471 1.06e-47 171
Msa0721150 MtrunA17_Chr4g0044501 30.612 490 289 20 12 472 10 477 2.56e-47 170
Msa0721150 MtrunA17_Chr1g0179901 29.518 498 298 18 9 470 13 493 8.60e-47 169
Msa0721150 MtrunA17_Chr1g0207951 28.571 476 296 11 12 471 124 571 1.55e-46 173
Msa0721150 MtrunA17_Chr1g0207951 28.216 482 297 14 2 459 641 1097 1.20e-44 167
Msa0721150 MtrunA17_Chr8g0377941 29.424 486 283 15 13 470 8 461 1.88e-46 167
Msa0721150 MtrunA17_Chr3g0122001 30.567 494 281 14 12 470 486 952 6.04e-46 171
Msa0721150 MtrunA17_Chr3g0122001 29.461 482 303 10 12 470 6 473 4.79e-45 169
Msa0721150 MtrunA17_Chr7g0265151 31.128 514 260 23 12 470 9 483 6.47e-46 166
Msa0721150 MtrunA17_Chr4g0053501 28.067 481 301 16 7 467 6 461 1.69e-45 166
Msa0721150 MtrunA17_Chr6g0462571 27.521 476 285 16 13 459 5 449 2.23e-45 165
Msa0721150 MtrunA17_Chr8g0347271 29.365 504 291 22 3 475 10 479 3.05e-45 164
Msa0721150 MtrunA17_Chr7g0265041 28.257 499 297 14 12 470 11 488 4.79e-45 164
Msa0721150 MtrunA17_Chr5g0401851 27.800 500 314 18 2 472 4 485 8.77e-45 163
Msa0721150 MtrunA17_Chr7g0265111 30.769 507 301 17 1 473 28 518 1.19e-44 164
Msa0721150 MtrunA17_Chr7g0243681 28.235 510 299 19 1 472 1 481 2.99e-44 162
Msa0721150 MtrunA17_Chr4g0053321 28.958 480 298 16 7 467 21 476 4.77e-44 161
Msa0721150 MtrunA17_Chr6g0462531 25.873 487 301 13 13 468 5 462 6.61e-44 160
Msa0721150 MtrunA17_Chr7g0243631 27.054 499 303 16 12 472 13 488 2.17e-43 160
Msa0721150 MtrunA17_Chr7g0218791 27.813 471 286 14 12 463 5 440 4.27e-43 158
Msa0721150 MtrunA17_Chr6g0454371 42.690 171 94 3 303 470 1 170 5.77e-43 150
Msa0721150 MtrunA17_Chr6g0462551 28.008 482 278 18 13 459 5 452 6.50e-43 158
Msa0721150 MtrunA17_Chr7g0243931 28.231 503 313 18 1 472 7 492 9.19e-43 158
Msa0721150 MtrunA17_Chr5g0419771 29.981 517 280 22 9 475 33 517 1.15e-42 158
Msa0721150 MtrunA17_Chr5g0431441 26.971 482 295 13 12 470 18 465 1.73e-42 157
Msa0721150 MtrunA17_Chr7g0243951 28.088 502 314 18 1 472 1 485 6.49e-42 155
Msa0721150 MtrunA17_Chr7g0275511 27.992 493 297 18 4 466 7 471 1.79e-41 154
Msa0721150 MtrunA17_Chr4g0011051 28.457 499 297 17 12 470 9 487 1.82e-41 154
Msa0721150 MtrunA17_Chr5g0429681 30.328 488 281 22 8 467 40 496 6.09e-41 153
Msa0721150 MtrunA17_Chr5g0442601 27.290 524 286 22 5 474 397 879 1.57e-40 155
Msa0721150 MtrunA17_Chr5g0442601 28.660 321 158 13 115 410 62 336 9.56e-27 114
Msa0721150 MtrunA17_Chr8g0373301 26.761 497 287 18 8 466 5 462 1.59e-40 151
Msa0721150 MtrunA17_Chr8g0382021 27.835 485 284 16 17 470 39 488 1.86e-40 151
Msa0721150 MtrunA17_Chr5g0448521 27.435 503 281 19 12 470 5 467 2.04e-40 151
Msa0721150 MtrunA17_Chr5g0431361 28.195 493 273 20 12 472 12 455 3.14e-40 150
Msa0721150 MtrunA17_Chr1g0207831 26.569 478 310 12 13 471 9 464 3.32e-40 150
Msa0721150 MtrunA17_Chr7g0275681 26.613 496 300 16 12 470 12 480 1.05e-39 149
Msa0721150 MtrunA17_Chr8g0335141 29.839 372 221 11 123 472 117 470 1.19e-39 149
Msa0721150 MtrunA17_Chr7g0243871 27.961 515 287 20 1 472 1 474 2.17e-39 148
Msa0721150 MtrunA17_Chr5g0431401 27.917 480 288 12 12 472 10 450 3.18e-39 147
Msa0721150 MtrunA17_Chr7g0265101 27.711 498 301 20 12 470 9 486 3.21e-39 148
Msa0721150 MtrunA17_Chr7g0265141 28.024 496 307 15 7 468 4 483 3.33e-39 148
Msa0721150 MtrunA17_Chr7g0249961 35.223 247 128 7 242 474 32 260 6.61e-39 142
Msa0721150 MtrunA17_Chr7g0243781 26.719 509 304 18 1 472 1 477 7.14e-39 147
Msa0721150 MtrunA17_Chr8g0335161 26.501 483 303 17 11 466 5 462 7.34e-39 147
Msa0721150 MtrunA17_Chr6g0454231 34.363 259 128 7 218 474 4 222 9.17e-39 146
Msa0721150 MtrunA17_Chr6g0454231 27.350 234 149 7 12 230 250 477 2.02e-13 72.4
Msa0721150 MtrunA17_Chr1g0159551 27.701 509 271 19 4 470 6 459 9.38e-39 146
Msa0721150 MtrunA17_Chr5g0448551 25.598 418 289 8 13 427 8 406 1.09e-38 146
Msa0721150 MtrunA17_Chr4g0060511 26.602 515 288 16 12 472 11 489 1.11e-38 147
Msa0721150 MtrunA17_Chr8g0334851 28.600 500 280 22 8 466 2 465 1.21e-38 146
Msa0721150 MtrunA17_Chr5g0442581 32.722 327 161 14 180 470 173 476 1.23e-38 147
Msa0721150 MtrunA17_Chr7g0243771 27.183 504 300 17 8 472 2 477 1.95e-38 146
Msa0721150 MtrunA17_Chr6g0459311 27.235 481 296 17 13 466 14 467 2.24e-38 145
Msa0721150 MtrunA17_Chr6g0462521 25.314 478 301 13 13 468 5 448 2.37e-38 145
Msa0721150 MtrunA17_Chr5g0393591 26.439 469 287 14 12 471 17 436 2.49e-38 145
Msa0721150 MtrunA17_Chr5g0431421 28.931 477 287 13 12 472 10 450 3.17e-38 144
Msa0721150 MtrunA17_Chr5g0442541 26.000 500 292 16 11 470 4 465 4.31e-38 144
Msa0721150 MtrunA17_Chr6g0486251 27.572 486 288 18 13 466 7 460 4.75e-38 144
Msa0721150 MtrunA17_Chr6g0486201 27.572 486 288 18 13 466 7 460 4.75e-38 144
Msa0721150 MtrunA17_Chr7g0243801 27.381 504 301 17 7 472 2 478 4.99e-38 145
Msa0721150 MtrunA17_Chr3g0106231 27.664 488 284 16 5 470 11 451 5.81e-38 144
Msa0721150 MtrunA17_Chr3g0079731 25.444 507 302 14 8 468 2 478 5.91e-38 144
Msa0721150 MtrunA17_Chr6g0463891 27.432 514 303 18 1 472 1 486 1.10e-37 144
Msa0721150 MtrunA17_Chr8g0369341 27.721 487 307 12 9 471 4 469 1.11e-37 144
Msa0721150 MtrunA17_Chr6g0462541 25.988 481 303 15 13 466 5 459 1.29e-37 143
Msa0721150 MtrunA17_Chr4g0044521 29.049 389 229 14 106 468 97 464 1.62e-37 143
Msa0721150 MtrunA17_Chr7g0265051 26.707 498 304 20 12 470 9 484 1.89e-37 143
Msa0721150 MtrunA17_Chr2g0307961 27.071 495 309 17 1 470 1 468 3.62e-37 142
Msa0721150 MtrunA17_Chr7g0243861 26.854 499 304 18 12 472 14 489 4.80e-37 142
Msa0721150 MtrunA17_Chr7g0232401 33.569 283 149 9 191 447 182 451 5.60e-37 141
Msa0721150 MtrunA17_Chr4g0014061 31.655 278 163 6 219 474 204 476 6.84e-37 141
Msa0721150 MtrunA17_Chr4g0044481 29.147 422 237 13 7 412 22 397 9.76e-37 140
Msa0721150 MtrunA17_Chr8g0336691 28.426 394 220 14 103 466 1014 1375 1.20e-36 144
Msa0721150 MtrunA17_Chr8g0336691 26.915 483 299 18 12 466 13 469 4.59e-35 139
Msa0721150 MtrunA17_Chr8g0336691 29.217 332 191 11 137 459 605 901 1.13e-31 129
Msa0721150 MtrunA17_Chr8g0336261 45.255 137 72 2 303 437 1 136 1.59e-36 131
Msa0721150 MtrunA17_Chr4g0042891 33.453 278 143 10 220 474 211 469 1.64e-36 140
Msa0721150 MtrunA17_Chr8g0339601 31.228 285 158 7 201 460 48 319 1.68e-36 137
Msa0721150 MtrunA17_Chr2g0302991 30.032 313 179 7 180 468 164 460 2.19e-36 140
Msa0721150 MtrunA17_Chr5g0442491 25.294 510 300 16 11 474 4 478 2.52e-36 140
Msa0721150 MtrunA17_Chr1g0207931 32.950 261 158 6 222 471 244 498 3.73e-36 140
Msa0721150 MtrunA17_Chr8g0361371 25.813 492 308 16 7 467 2 467 5.45e-36 139
Msa0721150 MtrunA17_Chr5g0419761 27.416 507 290 16 12 470 9 485 9.43e-36 138
Msa0721150 MtrunA17_Chr8g0339461 33.333 279 147 8 214 466 202 467 1.02e-35 138
Msa0721150 MtrunA17_Chr4g0066281 32.997 297 149 10 208 471 188 467 3.21e-35 137
Msa0721150 MtrunA17_Chr7g0243761 27.766 479 295 18 12 472 11 456 3.83e-35 136
Msa0721150 MtrunA17_Chr4g0042931 26.305 498 295 16 12 474 7 467 5.22e-35 136
Msa0721150 MtrunA17_Chr4g0066151 25.294 510 306 17 1 471 7 480 5.25e-35 136
Msa0721150 MtrunA17_Chr6g0463861 32.039 309 162 10 194 468 177 471 5.28e-35 136
Msa0721150 MtrunA17_Chr8g0336651 28.947 380 222 15 106 459 875 1232 6.26e-35 139
Msa0721150 MtrunA17_Chr8g0336651 27.913 369 223 14 106 453 100 446 1.16e-30 126
Msa0721150 MtrunA17_Chr8g0336651 30.739 257 138 6 219 466 545 770 1.60e-30 125
Msa0721150 MtrunA17_Chr4g0066221 28.106 491 292 19 17 471 16 481 7.65e-35 135
Msa0721150 MtrunA17_Chr8g0334861 29.747 316 173 9 180 467 166 460 7.75e-35 135
Msa0721150 MtrunA17_Chr4g0072771 24.632 475 312 16 12 472 25 467 8.15e-35 135
Msa0721150 MtrunA17_Chr5g0442521 25.049 515 296 20 11 474 4 479 1.39e-34 135
Msa0721150 MtrunA17_Chr6g0449931 32.941 255 128 6 219 447 206 443 1.39e-34 135
Msa0721150 MtrunA17_Chr5g0431371 27.443 481 289 15 12 472 10 450 2.06e-34 134
Msa0721150 MtrunA17_Chr6g0453941 29.907 321 154 8 12 331 11 261 2.39e-34 130
Msa0721150 MtrunA17_Chr5g0420801 27.254 488 298 16 9 471 4 459 2.74e-34 134
Msa0721150 MtrunA17_Chr6g0453981 36.408 206 120 4 132 331 8 208 4.24e-34 128
Msa0721150 MtrunA17_Chr8g0355221 27.660 376 238 12 119 472 125 488 4.67e-34 134
Msa0721150 MtrunA17_Chr4g0066261 27.092 502 284 18 17 471 16 482 6.25e-34 133
Msa0721150 MtrunA17_Chr2g0302961 27.296 392 233 14 103 468 98 463 6.97e-34 132
Msa0721150 MtrunA17_Chr4g0066201 31.488 289 150 9 216 471 202 475 7.73e-34 133
Msa0721150 MtrunA17_Chr1g0153451 28.150 373 221 14 117 466 111 459 8.00e-34 132
Msa0721150 MtrunA17_Chr1g0173121 38.164 207 112 4 280 470 256 462 1.05e-33 132
Msa0721150 MtrunA17_Chr8g0374941 30.844 308 177 10 194 473 1121 1420 1.13e-33 135
Msa0721150 MtrunA17_Chr8g0374941 30.208 288 165 11 194 453 183 462 2.39e-28 119
Msa0721150 MtrunA17_Chr8g0374941 29.110 292 170 9 191 452 642 926 2.59e-27 116
Msa0721150 MtrunA17_Chr7g0235051 25.866 491 299 15 1 467 1 450 1.84e-33 131
Msa0721150 MtrunA17_Chr8g0339451 28.032 371 221 11 115 459 102 452 1.98e-33 131
Msa0721150 MtrunA17_Chr7g0243851 25.956 497 290 15 1 472 1 444 2.48e-33 131
Msa0721150 MtrunA17_Chr2g0294921 27.163 497 290 16 17 471 165 631 2.60e-33 133
Msa0721150 MtrunA17_Chr4g0072761 26.685 371 233 11 111 472 114 454 2.61e-33 131
Msa0721150 MtrunA17_Chr5g0442561 25.636 511 295 21 11 474 4 476 2.69e-33 131
Msa0721150 MtrunA17_Chr5g0403641 32.203 295 147 12 203 463 220 495 4.95e-33 131
Msa0721150 MtrunA17_Chr8g0336741 31.902 326 185 13 106 415 107 411 5.37e-33 130
Msa0721150 MtrunA17_Chr8g0334831 27.149 442 247 15 13 415 7 412 7.60e-33 130
Msa0721150 MtrunA17_Chr7g0232391 27.100 369 229 10 119 466 112 461 8.34e-33 130
Msa0721150 MtrunA17_Chr5g0440421 29.167 504 292 24 12 470 10 493 8.85e-33 130
Msa0721150 MtrunA17_Chr5g0416741 25.247 507 321 18 1 472 2 485 1.37e-32 129
Msa0721150 MtrunA17_Chr8g0339441 37.129 202 105 6 280 459 217 418 2.69e-32 127
Msa0721150 MtrunA17_Chr5g0432731 29.260 311 186 9 171 467 3 293 2.74e-32 125
Msa0721150 MtrunA17_Chr8g0339631 31.022 274 151 10 210 459 198 457 2.86e-32 128
Msa0721150 MtrunA17_Chr7g0232411 30.233 301 167 11 191 466 179 461 3.18e-32 128
Msa0721150 MtrunA17_Chr1g0165701 35.211 213 121 5 277 472 273 485 5.46e-32 128
Msa0721150 MtrunA17_Chr6g0463851 27.168 519 263 22 17 471 16 483 1.03e-31 127
Msa0721150 MtrunA17_Chr7g0243711 35.349 215 120 4 277 472 104 318 1.22e-31 124
Msa0721150 MtrunA17_Chr8g0336731 30.820 305 173 10 128 415 147 430 1.23e-31 127
Msa0721150 MtrunA17_Chr8g0374971 29.808 312 171 10 194 471 184 481 1.54e-31 126
Msa0721150 MtrunA17_Chr8g0374901 29.126 309 177 9 194 471 182 479 1.66e-31 126
Msa0721150 MtrunA17_Chr5g0442511 26.166 493 286 18 11 471 48 494 1.77e-31 126
Msa0721150 MtrunA17_Chr2g0294931 26.877 506 292 17 13 473 12 484 1.00e-30 124
Msa0721150 MtrunA17_Chr4g0066131 27.632 304 166 9 205 471 189 475 1.84e-30 123
Msa0721150 MtrunA17_Chr2g0294941 30.218 321 194 9 117 424 17 320 2.51e-30 121
Msa0721150 MtrunA17_Chr7g0232331 25.446 448 282 16 10 431 4 425 2.58e-30 122
Msa0721150 MtrunA17_Chr8g0350881 28.664 307 185 8 194 473 184 483 4.44e-30 122
Msa0721150 MtrunA17_Chr4g0066171 31.915 282 158 8 216 471 204 477 4.88e-30 122
Msa0721150 MtrunA17_Chr7g0232311 27.348 362 215 12 130 467 123 460 1.22e-29 120
Msa0721150 MtrunA17_Chr8g0370941 27.160 405 218 17 116 470 111 488 1.94e-29 120
Msa0721150 MtrunA17_Chr5g0410941 25.697 502 289 17 16 471 27 490 4.28e-29 119
Msa0721150 MtrunA17_Chr7g0232341 30.597 268 144 10 212 452 198 450 4.94e-29 119
Msa0721150 MtrunA17_Chr7g0218311 30.903 288 153 10 217 471 210 484 5.25e-29 119
Msa0721150 MtrunA17_Chr8g0374931 29.514 288 158 8 217 471 207 482 5.83e-29 119
Msa0721150 MtrunA17_Chr5g0431431 31.855 248 144 8 163 407 99 324 6.65e-29 117
Msa0721150 MtrunA17_Chr5g0428081 26.453 499 291 16 16 471 15 480 8.63e-29 118
Msa0721150 MtrunA17_Chr1g0153461 33.981 206 117 5 280 466 3 208 8.67e-29 113
Msa0721150 MtrunA17_Chr3g0106251 29.930 284 171 6 201 473 30 296 3.24e-28 114
Msa0721150 MtrunA17_Chr7g0243611 30.272 294 164 10 130 412 8 271 3.73e-28 113
Msa0721150 MtrunA17_Chr6g0482061 27.425 299 180 10 180 458 186 467 6.89e-28 116
Msa0721150 MtrunA17_Chr5g0416821 25.000 492 330 19 1 472 3 475 1.43e-27 115
Msa0721150 MtrunA17_Chr7g0243911 34.783 207 114 5 274 465 15 215 1.56e-27 109
Msa0721150 MtrunA17_Chr2g0329111 27.166 427 247 16 13 406 7 402 1.89e-27 114
Msa0721150 MtrunA17_Chr8g0357361 43.478 138 76 2 280 416 117 253 6.10e-27 109
Msa0721150 MtrunA17_Chr5g0409591 30.403 273 163 9 221 468 212 482 1.14e-26 112
Msa0721150 MtrunA17_Chr7g0243811 30.544 239 145 6 179 410 149 373 4.56e-26 109
Msa0721150 MtrunA17_Chr7g0241781 26.226 469 267 20 1 450 1 409 6.64e-26 109
Msa0721150 MtrunA17_Chr7g0241801 26.415 477 258 19 1 462 1 399 1.73e-25 108
Msa0721150 MtrunA17_Chr8g0367221 26.047 430 262 14 1 406 1 398 7.47e-25 108
Msa0721150 MtrunA17_Chr8g0367221 38.281 128 75 2 283 406 1548 1675 4.34e-21 97.1
Msa0721150 MtrunA17_Chr8g0367221 38.000 150 87 4 283 427 1058 1206 4.92e-21 97.1
Msa0721150 MtrunA17_Chr8g0361411 25.282 443 273 15 1 424 1 404 6.26e-23 101
Msa0721150 MtrunA17_Chr6g0454111 36.111 144 88 2 180 323 44 183 2.54e-22 94.4
Msa0721150 MtrunA17_Chr8g0337381 40.000 130 71 3 350 474 2 129 4.66e-22 91.7
Msa0721150 MtrunA17_Chr7g0231631 30.739 257 165 7 223 472 11 261 4.77e-22 95.9
Msa0721150 MtrunA17_Chr7g0232351 30.698 215 118 8 191 389 179 378 5.87e-22 97.4
Msa0721150 MtrunA17_Chr8g0336251 38.168 131 77 3 278 404 265 395 1.31e-21 97.4
Msa0721150 MtrunA17_Chr1g0207881 33.987 153 94 1 326 471 233 385 2.28e-21 95.9
Msa0721150 MtrunA17_Chr8g0336321 38.168 131 77 3 278 404 265 395 2.34e-21 96.7
Msa0721150 MtrunA17_Chr5g0427571 37.600 125 75 2 283 404 105 229 2.76e-21 94.4
Msa0721150 MtrunA17_Chr3g0079711 32.065 184 103 5 307 468 3 186 2.03e-20 89.0
Msa0721150 MtrunA17_Chr1g0196851 26.024 415 266 17 12 414 49 434 2.40e-20 93.6
Msa0721150 MtrunA17_Chr4g0066141 36.076 158 84 4 332 472 196 353 3.33e-20 92.0
Msa0721150 MtrunA17_Chr3g0092031 35.714 126 79 2 282 406 5 129 3.70e-19 85.9
Msa0721150 MtrunA17_Chr6g0466831 23.333 420 275 12 2 406 8 395 6.21e-19 89.4
Msa0721150 MtrunA17_Chr5g0426411 33.918 171 103 4 6 169 6 173 1.20e-18 83.6
Msa0721150 MtrunA17_Chr7g0250021 25.915 355 226 12 1 346 1 327 2.67e-18 85.9
Msa0721150 MtrunA17_Chr2g0278721 24.706 425 284 16 6 414 511 915 2.76e-18 88.2
Msa0721150 MtrunA17_Chr2g0278721 34.127 126 81 2 282 406 273 397 5.89e-15 77.8
Msa0721150 MtrunA17_Chr4g0029151 24.512 461 269 16 9 437 17 430 2.87e-18 87.0
Msa0721150 MtrunA17_Chr4g0069611 24.574 411 261 17 12 406 15 392 3.82e-18 86.7
Msa0721150 MtrunA17_Chr2g0302851 23.301 412 265 14 12 406 16 393 7.25e-17 82.8
Msa0721150 MtrunA17_Chr6g0466841 22.128 470 312 15 2 450 8 444 9.84e-17 82.4
Msa0721150 MtrunA17_Chr2g0283041 24.274 482 314 17 12 474 7 456 1.38e-16 82.0
Msa0721150 MtrunA17_Chr4g0040711 24.667 450 283 17 9 437 5 419 1.81e-16 81.6
Msa0721150 MtrunA17_Chr6g0464091 24.455 413 266 15 12 406 18 402 2.57e-16 81.3
Msa0721150 MtrunA17_Chr4g0029131 31.325 166 103 4 283 437 257 422 3.66e-16 81.3
Msa0721150 MtrunA17_Chr2g0278741 22.014 427 257 14 12 406 97 479 4.46e-16 80.9
Msa0721150 MtrunA17_Chr4g0040691 24.348 460 297 15 9 448 5 433 1.29e-15 79.0
Msa0721150 MtrunA17_Chr4g0039881 22.906 406 254 15 22 406 2 369 3.33e-15 77.8
Msa0721150 MtrunA17_Chr8g0336271 24.812 266 163 9 11 250 9 263 3.67e-15 75.9
Msa0721150 MtrunA17_Chr8g0334841 32.895 152 82 5 180 328 1 135 8.48e-15 72.4
Msa0721150 MtrunA17_Chr6g0454381 32.593 135 79 5 132 258 8 138 3.16e-14 69.7
Msa0721150 MtrunA17_Chr5g0442501 24.556 338 196 12 11 327 4 303 1.24e-13 71.6
Msa0721150 MtrunA17_Chr5g0427561 34.524 84 54 1 388 470 1 84 2.57e-13 65.5
Msa0721150 MtrunA17_Chr6g0454391 42.857 63 36 0 366 428 13 75 4.79e-13 65.9
Msa0721150 MtrunA17_Chr6g0454281 27.103 214 118 8 12 198 10 212 1.88e-12 66.6
Msa0721150 MtrunA17_Chr7g0243731 42.857 70 40 0 345 414 4 73 6.41e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0721150 AT1G22380.1 36.059 477 278 12 12 470 13 480 2.00e-94 294
Msa0721150 AT1G22400.1 34.029 479 280 10 12 467 13 478 3.05e-90 283
Msa0721150 AT1G22360.1 34.855 482 277 11 12 470 10 477 7.60e-89 280
Msa0721150 AT1G22370.2 34.937 478 277 10 12 470 13 475 6.51e-87 275
Msa0721150 AT1G22360.2 34.647 482 266 12 12 470 10 465 1.72e-85 271
Msa0721150 AT1G22340.1 34.369 483 279 13 12 470 13 481 6.97e-83 265
Msa0721150 AT1G78270.1 34.316 475 289 13 12 470 13 480 1.39e-78 253
Msa0721150 AT3G11340.1 33.612 479 278 13 1 472 1 446 3.39e-77 248
Msa0721150 AT5G05900.1 34.583 480 253 15 12 470 8 447 7.52e-73 237
Msa0721150 AT5G05880.1 33.951 486 264 15 7 472 2 450 1.17e-69 229
Msa0721150 AT3G55710.1 31.263 483 288 14 6 472 2 456 5.66e-66 219
Msa0721150 AT3G46660.1 33.539 486 275 14 1 472 6 457 1.51e-65 218
Msa0721150 AT3G55700.1 30.864 486 282 14 6 472 2 452 1.52e-65 218
Msa0721150 AT5G05860.1 33.194 479 272 12 6 470 3 447 2.12e-64 215
Msa0721150 AT3G46670.1 31.884 483 285 15 1 472 1 450 6.58e-63 211
Msa0721150 AT4G15480.1 29.522 481 304 10 12 474 19 482 1.01e-60 206
Msa0721150 AT5G05890.1 31.098 492 274 15 7 472 2 454 1.01e-60 206
Msa0721150 AT5G38010.1 32.218 478 283 14 6 470 4 453 1.62e-60 205
Msa0721150 AT5G05870.1 30.675 489 279 15 6 470 2 454 7.90e-60 203
Msa0721150 AT5G59590.1 30.063 479 282 16 6 467 4 446 2.63e-59 202
Msa0721150 AT1G22370.1 36.964 303 182 6 173 470 7 305 3.35e-59 197
Msa0721150 AT3G02100.1 30.515 485 293 13 6 474 7 463 1.33e-58 200
Msa0721150 AT3G21560.1 29.184 490 305 13 1 468 1 470 3.43e-58 200
Msa0721150 AT3G46690.1 31.707 492 268 17 6 472 3 451 3.79e-58 199
Msa0721150 AT3G46680.1 29.938 481 287 15 6 470 3 449 3.96e-58 198
Msa0721150 AT3G46650.1 29.792 480 275 14 4 470 2 432 2.40e-57 196
Msa0721150 AT5G38040.1 31.965 463 272 15 20 470 18 449 2.58e-57 196
Msa0721150 AT2G43840.2 30.689 479 285 16 7 471 2 447 1.92e-56 194
Msa0721150 AT5G59580.1 30.316 475 281 16 12 471 9 448 3.36e-56 193
Msa0721150 AT2G43840.1 30.498 482 282 17 7 471 2 447 8.62e-56 192
Msa0721150 AT3G46720.1 29.979 477 287 15 6 472 3 442 9.24e-56 192
Msa0721150 AT3G46700.1 30.228 483 282 17 6 472 3 446 1.86e-55 191
Msa0721150 AT2G31750.1 30.591 474 297 14 7 470 3 454 2.44e-55 191
Msa0721150 AT2G31750.2 30.544 478 300 14 7 474 3 458 3.48e-55 192
Msa0721150 AT2G43820.1 30.353 481 286 15 7 472 2 448 3.60e-55 191
Msa0721150 AT2G31790.1 29.498 478 293 15 7 467 3 453 1.71e-54 189
Msa0721150 AT4G15490.1 29.079 478 297 14 11 467 7 463 1.08e-53 187
Msa0721150 AT2G28080.1 29.670 455 286 16 17 454 23 460 1.12e-52 185
Msa0721150 AT4G15500.1 28.512 477 304 10 7 467 4 459 2.34e-52 184
Msa0721150 AT2G26480.1 30.085 472 291 14 12 474 8 449 3.07e-52 183
Msa0721150 AT1G05675.1 30.021 483 280 13 8 467 2 449 2.11e-51 181
Msa0721150 AT2G36970.1 29.424 486 299 16 12 474 10 474 3.68e-51 181
Msa0721150 AT5G17050.1 29.098 488 301 18 3 474 2 460 1.53e-48 173
Msa0721150 AT1G05680.1 29.796 490 272 16 8 467 2 449 6.62e-48 171
Msa0721150 AT4G15550.1 27.381 504 278 18 9 467 10 470 1.14e-46 168
Msa0721150 AT4G34138.1 28.858 499 276 14 5 459 4 467 1.88e-46 168
Msa0721150 AT5G17040.1 27.406 478 291 18 9 470 2 439 2.06e-46 167
Msa0721150 AT2G23260.1 28.992 476 299 18 7 470 5 453 1.98e-45 165
Msa0721150 AT1G30530.1 28.306 484 293 16 3 470 5 450 2.96e-45 164
Msa0721150 AT2G15490.3 29.713 488 293 17 12 468 7 475 2.44e-44 162
Msa0721150 AT2G36760.1 28.827 503 294 17 12 472 14 494 2.96e-44 162
Msa0721150 AT3G16520.3 31.989 372 208 14 115 468 113 457 3.24e-44 161
Msa0721150 AT1G05560.2 28.884 502 279 19 2 470 45 501 3.54e-44 162
Msa0721150 AT2G15480.1 28.310 491 296 18 12 468 10 478 4.02e-44 162
Msa0721150 AT2G29710.1 26.923 494 300 16 10 473 3 465 4.90e-44 161
Msa0721150 AT2G15490.1 29.532 491 293 17 12 468 7 478 5.91e-44 161
Msa0721150 AT5G17030.1 29.659 381 230 10 105 470 98 455 7.74e-44 160
Msa0721150 AT1G05560.1 29.065 492 271 19 12 470 5 451 9.94e-44 160
Msa0721150 AT1G01420.2 28.330 473 286 16 7 453 6 451 1.14e-43 160
Msa0721150 AT1G01420.1 28.330 473 286 16 7 453 3 448 1.16e-43 160
Msa0721150 AT3G16520.2 32.011 353 195 13 115 446 113 441 1.77e-43 159
Msa0721150 AT5G17040.2 31.046 306 189 10 170 470 49 337 1.98e-43 156
Msa0721150 AT2G23250.1 29.957 464 282 18 21 473 7 438 2.34e-43 159
Msa0721150 AT2G15480.2 27.745 501 296 18 12 468 10 488 2.68e-43 160
Msa0721150 AT3G16520.1 32.011 353 195 13 115 446 113 441 2.81e-43 159
Msa0721150 AT1G24100.1 29.051 506 272 20 2 470 3 458 3.81e-43 159
Msa0721150 AT1G05530.1 28.685 502 263 20 12 470 5 454 1.61e-42 157
Msa0721150 AT2G36770.1 28.257 499 302 18 12 472 14 494 8.64e-42 155
Msa0721150 AT2G29730.1 26.653 484 295 19 14 467 6 459 1.32e-41 154
Msa0721150 AT4G34131.1 27.022 507 309 20 1 472 1 481 1.67e-41 154
Msa0721150 AT5G26310.1 29.084 502 264 25 9 463 4 460 2.35e-41 154
Msa0721150 AT4G01070.1 26.638 473 291 15 6 450 2 446 3.53e-41 154
Msa0721150 AT2G36780.1 27.821 514 281 18 10 470 12 488 3.83e-41 154
Msa0721150 AT2G36750.1 28.008 507 284 20 12 470 10 483 4.29e-41 154
Msa0721150 AT5G66690.1 28.858 499 269 22 9 463 4 460 7.70e-41 152
Msa0721150 AT2G36800.1 26.515 528 289 19 1 470 1 487 1.52e-39 149
Msa0721150 AT4G14090.1 29.012 486 269 18 12 467 13 452 1.92e-39 148
Msa0721150 AT4G34135.1 28.081 495 300 15 12 472 11 483 4.66e-39 148
Msa0721150 AT2G36790.1 27.451 510 294 20 12 473 13 494 5.24e-39 148
Msa0721150 AT1G01390.1 28.000 425 252 12 7 406 3 398 5.28e-39 147
Msa0721150 AT3G53160.1 34.173 278 143 8 221 470 217 482 8.18e-39 147
Msa0721150 AT1G01390.2 28.000 425 252 12 7 406 20 415 9.05e-39 147
Msa0721150 AT3G21790.1 25.646 503 310 15 12 474 4 482 4.68e-37 142
Msa0721150 AT3G22250.1 24.943 441 292 12 13 435 9 428 1.39e-36 140
Msa0721150 AT1G73880.1 25.873 487 313 16 7 472 9 468 2.22e-36 140
Msa0721150 AT4G36770.1 27.178 482 274 18 12 454 4 447 7.59e-36 138
Msa0721150 AT3G50740.1 27.345 501 280 21 9 463 4 466 6.28e-35 136
Msa0721150 AT1G07250.1 25.615 488 293 19 11 459 5 461 8.91e-35 136
Msa0721150 AT5G03490.1 26.869 495 289 17 3 468 10 460 5.19e-34 133
Msa0721150 AT2G30140.2 26.078 487 289 18 12 473 13 453 6.24e-34 133
Msa0721150 AT2G29750.1 25.306 490 301 16 7 460 3 463 1.02e-33 133
Msa0721150 AT2G30140.1 25.873 487 291 18 12 473 13 454 1.42e-33 132
Msa0721150 AT1G07260.1 30.667 300 169 10 180 460 182 461 9.68e-33 130
Msa0721150 AT5G14860.1 27.593 511 281 26 9 470 5 475 1.46e-32 130
Msa0721150 AT1G07240.1 30.671 313 181 12 166 459 169 464 2.13e-32 129
Msa0721150 AT3G21760.1 24.594 431 280 11 12 416 4 415 5.16e-32 128
Msa0721150 AT2G29740.1 25.963 493 295 18 7 460 3 464 8.31e-32 127
Msa0721150 AT3G53150.1 27.381 504 305 20 12 470 22 509 1.09e-31 127
Msa0721150 AT2G30150.2 25.304 494 304 15 4 474 5 456 7.69e-31 124
Msa0721150 AT5G37950.2 34.035 285 152 11 113 389 81 337 1.25e-30 122
Msa0721150 AT3G21750.1 25.149 505 302 15 12 475 4 473 1.74e-30 124
Msa0721150 AT4G15260.1 29.496 278 157 7 218 470 91 354 2.08e-30 121
Msa0721150 AT2G18570.1 29.562 274 145 11 219 463 205 459 2.92e-30 123
Msa0721150 AT5G37950.1 33.916 286 157 12 113 389 81 343 1.07e-29 119
Msa0721150 AT4G15280.1 29.137 278 159 6 218 470 209 473 2.45e-29 120
Msa0721150 AT4G15280.2 29.348 276 157 6 218 468 241 503 3.31e-29 120
Msa0721150 AT3G21800.1 24.449 499 312 18 13 470 5 479 4.08e-29 120
Msa0721150 AT2G30150.1 25.364 481 294 15 17 474 2 440 8.54e-29 118
Msa0721150 AT3G21780.1 23.953 430 270 13 12 415 4 402 2.12e-28 117
Msa0721150 AT2G18560.1 29.927 274 144 11 219 463 115 369 4.69e-28 115
Msa0721150 AT1G51210.1 24.169 451 289 17 12 446 20 433 9.01e-28 115
Msa0721150 AT2G16890.2 23.395 483 322 16 12 470 9 467 1.89e-27 115
Msa0721150 AT1G10400.1 25.447 503 278 22 12 467 7 459 1.99e-27 115
Msa0721150 AT1G06000.1 28.676 272 161 8 216 467 172 430 4.20e-27 113
Msa0721150 AT2G16890.3 24.344 419 278 13 12 415 9 403 8.48e-26 109
Msa0721150 AT5G49690.1 26.150 413 259 13 6 404 4 384 2.89e-25 108
Msa0721150 AT5G12890.1 35.233 193 102 6 220 401 224 404 1.91e-23 103
Msa0721150 AT5G54010.1 24.703 421 265 13 9 415 3 385 4.57e-20 92.8
Msa0721150 AT5G65550.1 36.842 133 81 3 283 414 270 400 3.56e-19 90.5
Msa0721150 AT2G22590.1 24.272 412 270 13 12 406 15 401 1.46e-18 88.6
Msa0721150 AT4G27570.1 23.684 418 264 15 12 414 7 384 2.21e-18 87.8
Msa0721150 AT4G01070.2 24.024 333 215 11 6 328 2 306 1.43e-17 84.3
Msa0721150 AT4G27560.1 23.206 418 266 15 12 414 7 384 2.19e-17 84.7
Msa0721150 AT5G53990.1 23.871 465 288 17 12 456 6 424 1.38e-14 76.3
Msa0721150 AT4G09500.2 23.758 463 291 19 12 456 6 424 3.67e-13 71.6
Msa0721150 AT1G64910.1 22.857 420 262 16 12 415 6 379 3.73e-13 71.6
Msa0721150 AT4G34135.2 24.779 339 209 13 12 327 11 326 4.71e-13 70.5
Msa0721150 AT3G29630.1 23.191 470 294 16 9 456 3 427 1.87e-12 69.7
Msa0721150 AT4G09500.1 29.213 178 111 7 290 456 226 399 3.27e-11 65.5

Find 168 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATAAGTTGCATTATTT+TGG 0.129986 5_1:-17583947 Msa0721150:CDS
CTATTAGTTCTTGCTGCTTT+TGG 0.136964 5_1:-17583855 Msa0721150:CDS
AACTTGCGCAAGGGTATATT+TGG 0.183036 5_1:+17580799 None:intergenic
AAGTATAAGTGTAGGCATTT+TGG 0.220612 5_1:-17579830 Msa0721150:three_prime_UTR
GTCTACTATCCCGTAAAATA+AGG 0.228152 5_1:-17581207 Msa0721150:exon
ATGTGATGTTTAAACTATTT+AGG 0.254247 5_1:-17581018 Msa0721150:three_prime_UTR
ACTGATTTGGCTGCTGAGTT+TGG 0.266869 5_1:-17583901 Msa0721150:CDS
GTTGCTTCTCTTGGTCAAAT+TGG 0.268661 5_1:-17580993 Msa0721150:three_prime_UTR
GGATATATATATACCTCTAA+TGG 0.273189 5_1:+17583789 None:intergenic
GGGCCTATGGTGTAGAGTTT+AGG 0.277656 5_1:+17581893 None:intergenic
AAGATTTAATTCAATATATA+AGG 0.286593 5_1:-17581229 Msa0721150:CDS
ATTTGTTGATCAGCAAAATA+AGG 0.287071 5_1:+17581446 None:intergenic
GTGAGTGAGGTTTGGAAACT+TGG 0.292117 5_1:-17581410 Msa0721150:CDS
ATTATTTCTTCTCTCTTCAT+TGG 0.297807 5_1:+17581716 None:intergenic
TACATATGCAAGAAAGTTAT+AGG 0.301470 5_1:-17584333 Msa0721150:five_prime_UTR
GAAGAGAAGCATCCTGGATT+TGG 0.314492 5_1:-17584045 Msa0721150:CDS
TCAAACATGGTACAAGAAAA+AGG 0.314881 5_1:-17581638 Msa0721150:CDS
TTTGGGTTGTAACTCAATAT+AGG 0.319605 5_1:-17579812 Msa0721150:three_prime_UTR
GGCCTATGGTGTAGAGTTTA+GGG 0.331169 5_1:+17581894 None:intergenic
CTGATTTGGCTGCTGAGTTT+GGG 0.334780 5_1:-17583900 Msa0721150:CDS
GAGAAGAAATAATTGAGATT+TGG 0.335214 5_1:-17581706 Msa0721150:CDS
AAGAAGTTGGTAAGACAAAA+TGG 0.336575 5_1:-17579527 Msa0721150:three_prime_UTR
CTGATCAACAAATAAATAGT+AGG 0.353536 5_1:-17581436 Msa0721150:CDS
ATTGTTCAACCCTCGAATTT+TGG 0.354954 5_1:+17581094 None:intergenic
TGTAAAATCAGCCATGGATA+TGG 0.357578 5_1:-17581306 Msa0721150:CDS
ACATCTTTATTCAAAGCTTA+AGG 0.360862 5_1:+17581037 None:intergenic
TGGTGACCTTGCTACTGATT+TGG 0.367535 5_1:-17583914 Msa0721150:CDS
TAAATCTTGGAAGTTGTTGT+AGG 0.370730 5_1:+17581244 None:intergenic
TTATATATTGAATTAAATCT+TGG 0.370783 5_1:+17581231 None:intergenic
TTTCCTCGTGTCAACCGTTT+AGG 0.370963 5_1:+17580459 None:intergenic
CTTCGTGAAATCAAAGTTGT+TGG 0.372610 5_1:-17579667 Msa0721150:three_prime_UTR
GTGGAGTTATATATGTATTA+AGG 0.372662 5_1:+17584369 None:intergenic
TCGGTTATATATGTTAGTTT+TGG 0.373327 5_1:-17581749 Msa0721150:CDS
GTGGTGTGCCTATGATTTGT+TGG 0.376618 5_1:-17581469 Msa0721150:CDS
TGTGGGGTATGAGAATCTTC+TGG 0.379392 5_1:+17580042 None:intergenic
ATTTGCTTTAAGTGATTGTT+TGG 0.382144 5_1:+17581982 None:intergenic
ATTTAGGTGGTTGCTTCTCT+TGG 0.384556 5_1:-17581002 Msa0721150:three_prime_UTR
TCATTGCACTCCAAGAGGTT+TGG 0.384631 5_1:+17583817 None:intergenic
GCGCAGAAATAGAACAAATC+TGG 0.385512 5_1:-17579947 Msa0721150:three_prime_UTR
AACTTCTTCGTTACGAAGAA+TGG 0.388157 5_1:+17579542 None:intergenic
CAACCTCGTCTATACGGATA+TGG 0.388459 5_1:+17582014 None:intergenic
CACGAAGAATGGCGTCGATC+AGG 0.389497 5_1:+17579618 None:intergenic
CGAAGTAAGTTTGCCATGCC+TGG 0.400958 5_1:+17582079 None:intergenic
GGTATATTTGGAACGGCTGC+AGG 0.402358 5_1:+17580811 None:intergenic
TTTCTGTGTTCCAAACCTCT+TGG 0.411613 5_1:-17583827 Msa0721150:CDS
GAAGGAACTAGCAAGGATAA+AGG 0.411764 5_1:-17581596 Msa0721150:CDS
ATAGTCTTGAATTGAAGCTT+AGG 0.412111 5_1:+17584084 None:intergenic
TAGGAAAGTTGTGGAGAATA+TGG 0.412889 5_1:-17581363 Msa0721150:CDS
GAAGTACAACCTCGTCTATA+CGG 0.414116 5_1:+17582008 None:intergenic
CCCCACAGTTATTGTACCTT+GGG 0.414340 5_1:-17580026 Msa0721150:three_prime_UTR
TGCAATGAACTTCCCATTAG+AGG 0.423671 5_1:-17583802 Msa0721150:intron
GTAGGTTTGTGAGTGAGGTT+TGG 0.428038 5_1:-17581418 Msa0721150:CDS
TCTTTCGATTTCACGAAGAA+TGG 0.438499 5_1:+17579607 None:intergenic
TGCAATGCATTATGCCTAAA+CGG 0.440515 5_1:-17580473 Msa0721150:three_prime_UTR
ACCACCAGGACTCACACTCT+TGG 0.441655 5_1:+17581271 None:intergenic
AAGGATAAAGGGTTGATTGT+TGG 0.443900 5_1:-17581584 Msa0721150:CDS
CATAGTGAAGAGAAGCATCC+TGG 0.445229 5_1:-17584051 Msa0721150:CDS
GATATATATATACCTCTAAT+GGG 0.445458 5_1:+17583790 None:intergenic
TGACTCTCAACCATTGAAAT+CGG 0.446084 5_1:-17581768 Msa0721150:CDS
GAGTCGGTTATGAATGTATT+CGG 0.451281 5_1:+17584149 None:intergenic
TTGAACAATACATATAAATA+CGG 0.456552 5_1:-17581080 Msa0721150:three_prime_UTR
TCTACTATCCCGTAAAATAA+GGG 0.457384 5_1:-17581206 Msa0721150:exon
GAAGCATATATCAGAAGATA+AGG 0.458304 5_1:-17580319 Msa0721150:three_prime_UTR
TAATGGGTGGAATTCAACTT+TGG 0.460954 5_1:-17581504 Msa0721150:CDS
CGCATCATAACAAACATTCC+AGG 0.461698 5_1:-17582097 Msa0721150:CDS
AAATAGTAGGTTTGTGAGTG+AGG 0.465097 5_1:-17581423 Msa0721150:CDS
TCATCAACTAAACTCGATCT+AGG 0.466081 5_1:+17579484 None:intergenic
GAATATGGTGAATGATGTTA+TGG 0.469748 5_1:-17581348 Msa0721150:CDS
TGAATGATGTTATGGTGAAT+AGG 0.471178 5_1:-17581340 Msa0721150:CDS
AGCATCCTGGATTTGGAGAA+AGG 0.475413 5_1:-17584038 Msa0721150:CDS
AAATAAGGCCAACAAATCAT+AGG 0.477093 5_1:+17581461 None:intergenic
ACTATTCTGAAGCACGTAGT+TGG 0.479227 5_1:-17580945 Msa0721150:three_prime_UTR
AGGGGATAAGCTGAGATTCA+TGG 0.479408 5_1:-17579571 Msa0721150:three_prime_UTR
AAGTTGTTGGTTAGACTAAG+AGG 0.480307 5_1:-17579654 Msa0721150:three_prime_UTR
GAAACTTGGGTTGGATATGA+AGG 0.480309 5_1:-17581396 Msa0721150:CDS
GAAAGAGTTGGTAACACAAA+GGG 0.482676 5_1:-17579590 Msa0721150:three_prime_UTR
GCTTTAGCATTGAATTTACA+TGG 0.483622 5_1:+17584220 None:intergenic
TGAACAATACATATAAATAC+GGG 0.486891 5_1:-17581079 Msa0721150:three_prime_UTR
GTGACAAAACTTCCTCTTGT+GGG 0.488001 5_1:+17581555 None:intergenic
GAATTTACATGGCCTTGTGC+TGG 0.491907 5_1:+17584231 None:intergenic
TAAGAGCAATTTATTCAAAG+TGG 0.492289 5_1:-17581813 Msa0721150:CDS
AGCCATGGATATGGCTAAGT+TGG 0.496465 5_1:-17581297 Msa0721150:CDS
CATCGTGAAATTGAAAGAGT+TGG 0.498732 5_1:-17579733 Msa0721150:three_prime_UTR
TGAGTGAGGTTTGGAAACTT+GGG 0.500077 5_1:-17581409 Msa0721150:CDS
ACTCATACTCAACACATTTG+AGG 0.503493 5_1:-17581957 Msa0721150:CDS
ACATATATAACCGATTTCAA+TGG 0.506428 5_1:+17581758 None:intergenic
ATTGTGTCACTGAGTTTGTA+TGG 0.506708 5_1:-17584003 Msa0721150:CDS
AGGATTATTAAGTGAGCTTG+AGG 0.508071 5_1:-17581618 Msa0721150:CDS
CCTATCCTTTCTCCAAATCC+AGG 0.509024 5_1:+17584033 None:intergenic
ACCCCACAGTTATTGTACCT+TGG 0.509387 5_1:-17580027 Msa0721150:three_prime_UTR
TAGTCTTGAATTGAAGCTTA+GGG 0.511757 5_1:+17584085 None:intergenic
CACATTGAACCAAAATTCGA+GGG 0.513459 5_1:-17581103 Msa0721150:three_prime_UTR
GAAATAATTGAGATTTGGCA+TGG 0.518839 5_1:-17581701 Msa0721150:CDS
ATATGAAGGATGTTTGTGAT+AGG 0.519622 5_1:-17581382 Msa0721150:CDS
TTACAACATGCAATGCCACT+TGG 0.521702 5_1:+17580384 None:intergenic
AAGGAACTAGCAAGGATAAA+GGG 0.522413 5_1:-17581595 Msa0721150:CDS
TAAAGGGTTGATTGTTGGAT+GGG 0.526671 5_1:-17581579 Msa0721150:CDS
TCTTTCAATTTCACGATGAG+TGG 0.527560 5_1:+17579738 None:intergenic
GGAGTTAAAAGTATAAGTGT+AGG 0.529189 5_1:-17579838 Msa0721150:three_prime_UTR
AGAGTCAAGCCACGCCATGC+AGG 0.530095 5_1:+17581784 None:intergenic
TCACATTGAACCAAAATTCG+AGG 0.533533 5_1:-17581104 Msa0721150:three_prime_UTR
ACATGGCCTTGTGCTGGACA+TGG 0.534043 5_1:+17584237 None:intergenic
CTTCGTGAAATCGAAAGAGT+TGG 0.537399 5_1:-17579602 Msa0721150:three_prime_UTR
TGAGGTTTGGAAACTTGGGT+TGG 0.537607 5_1:-17581405 Msa0721150:CDS
ATCTTGGAAGTTGTTGTAGG+AGG 0.539036 5_1:+17581247 None:intergenic
TATATGCTTCAGCTGCCGCT+TGG 0.542413 5_1:+17580332 None:intergenic
GTGGTGATGAAGAGGGCCTA+TGG 0.544580 5_1:+17581880 None:intergenic
ATTCTTCGTAACGAAGAAGT+TGG 0.546872 5_1:-17579540 Msa0721150:three_prime_UTR
ATAAAGGGTTGATTGTTGGA+TGG 0.548108 5_1:-17581580 Msa0721150:CDS
GCATCCAAGAGTGTGAGTCC+TGG 0.552305 5_1:-17581275 Msa0721150:CDS
ACTTTGGAAAGTGTGGTTTG+TGG 0.554343 5_1:-17581488 Msa0721150:CDS
AAGCATATATCAGAAGATAA+GGG 0.557340 5_1:-17580318 Msa0721150:three_prime_UTR
GAATTCAACTTTGGAAAGTG+TGG 0.562112 5_1:-17581495 Msa0721150:CDS
TATGAATGTATTCGGTGTTG+AGG 0.573279 5_1:+17584157 None:intergenic
TCGAATGTATATTTCTAACA+TGG 0.573595 5_1:-17580899 Msa0721150:three_prime_UTR
TGCGTTAGTTAACTTGCGCA+AGG 0.574544 5_1:+17580789 None:intergenic
TTATTAAGTGAGCTTGAGGA+AGG 0.576667 5_1:-17581614 Msa0721150:CDS
CATCGTTGAATTGAATGAGT+CGG 0.580012 5_1:+17584133 None:intergenic
CAACTAAACTCGATCTAGGA+AGG 0.581159 5_1:+17579488 None:intergenic
TGTGACAAAACTTCCTCTTG+TGG 0.583263 5_1:+17581554 None:intergenic
AGTAGTAATTTCTTTCCAAG+TGG 0.585014 5_1:-17580399 Msa0721150:three_prime_UTR
TCCAAGAGTGTGAGTCCTGG+TGG 0.586272 5_1:-17581272 Msa0721150:CDS
CACGTGAGTTAACTCACGCT+GGG 0.586735 5_1:-17580668 Msa0721150:three_prime_UTR
CATGGCCTTGTGCTGGACAT+GGG 0.589394 5_1:+17584238 None:intergenic
GGGTCAAAATTGTAGGCCCA+AGG 0.592306 5_1:+17580010 None:intergenic
GCCCAAGGTACAATAACTGT+GGG 0.593061 5_1:+17580025 None:intergenic
CCTGGATTTGGAGAAAGGAT+AGG 0.594736 5_1:-17584033 Msa0721150:CDS
TGTTGGATGGGTCCCACAAG+AGG 0.597020 5_1:-17581567 Msa0721150:CDS
CGAAAGAGTTGGTAACACAA+AGG 0.599412 5_1:-17579591 Msa0721150:three_prime_UTR
CCAGCGTGAGTTAACTCACG+TGG 0.604036 5_1:+17580669 None:intergenic
ATCTTCCCATGTCCAGCACA+AGG 0.604045 5_1:-17584243 Msa0721150:CDS
GCGCAAGGGTATATTTGGAA+CGG 0.604585 5_1:+17580804 None:intergenic
TGCCAACTTAGCCATATCCA+TGG 0.606456 5_1:+17581295 None:intergenic
GCGTTAGTTAACTTGCGCAA+GGG 0.607499 5_1:+17580790 None:intergenic
ATGGGTGATTAGGTCAAACA+TGG 0.609105 5_1:-17581651 Msa0721150:CDS
TTCCCTAAACTCTACACCAT+AGG 0.611308 5_1:-17581896 Msa0721150:CDS
GGAGTTTGTAAAATCAGCCA+TGG 0.612612 5_1:-17581312 Msa0721150:CDS
CATAACAAACATTCCAGGCA+TGG 0.613569 5_1:-17582092 Msa0721150:CDS
TGGATAGAACCTGCATGGCG+TGG 0.616199 5_1:-17581793 Msa0721150:CDS
GTATATTTGGAACGGCTGCA+GGG 0.618253 5_1:+17580812 None:intergenic
CAAAGTGGATAGAACCTGCA+TGG 0.622228 5_1:-17581798 Msa0721150:CDS
AATAGTTTGTGTAAATGTCG+AGG 0.623169 5_1:+17580962 None:intergenic
CATCATCATGTTGTTCCAAG+CGG 0.624291 5_1:-17580347 Msa0721150:three_prime_UTR
TTGTTGTAGGAGGAACCACC+AGG 0.625499 5_1:+17581257 None:intergenic
TAAACGGTTGACACGAGGAA+AGG 0.626244 5_1:-17580457 Msa0721150:three_prime_UTR
ACGAATTTGTGAGAGGACTG+AGG 0.626974 5_1:+17581925 None:intergenic
TGTTTGTGATAGGAAAGTTG+TGG 0.627468 5_1:-17581372 Msa0721150:CDS
TAGTTGATGAGAAACAAATG+AGG 0.628829 5_1:-17579471 Msa0721150:three_prime_UTR
CCACGTGAGTTAACTCACGC+TGG 0.631737 5_1:-17580669 Msa0721150:three_prime_UTR
CAGCAGCCAAATCAGTAGCA+AGG 0.634571 5_1:+17583908 None:intergenic
GGCCCAAGGTACAATAACTG+TGG 0.641557 5_1:+17580024 None:intergenic
TGATGTTTAAACTATTTAGG+TGG 0.641802 5_1:-17581015 Msa0721150:three_prime_UTR
GAAGTTCATTGCACTCCAAG+AGG 0.641830 5_1:+17583812 None:intergenic
GTATTGAGGTGGTGATGAAG+AGG 0.644898 5_1:+17581872 None:intergenic
AAAGAGTTGGTAACACAAAG+GGG 0.655511 5_1:-17579589 Msa0721150:three_prime_UTR
TGCATTGCATATGTACCACT+AGG 0.660656 5_1:+17580487 None:intergenic
TGTTATGGTGAATAGGAATG+AGG 0.664290 5_1:-17581333 Msa0721150:CDS
AGTGAATACGAATTTGTGAG+AGG 0.665978 5_1:+17581918 None:intergenic
GCTTGAGGAAGGAACTAGCA+AGG 0.666314 5_1:-17581603 Msa0721150:CDS
TATTGAGGTGGTGATGAAGA+GGG 0.674916 5_1:+17581873 None:intergenic
CAGCGTGAGTTAACTCACGT+GGG 0.689933 5_1:+17580670 None:intergenic
ATGCCTAAACGGTTGACACG+AGG 0.694851 5_1:-17580462 Msa0721150:three_prime_UTR
TATGTAAAATTAGTGCTGTG+TGG 0.696188 5_1:+17584350 None:intergenic
AGCGTGAGTTAACTCACGTG+GGG 0.708773 5_1:+17580671 None:intergenic
GAACCATATCCGTATAGACG+AGG 0.709030 5_1:-17582017 Msa0721150:CDS
AAAACTTAGACAAATCCTAG+TGG 0.714850 5_1:-17580502 Msa0721150:three_prime_UTR
GAACAATACATATAAATACG+GGG 0.738486 5_1:-17581078 Msa0721150:three_prime_UTR
CCCAAGGTACAATAACTGTG+GGG 0.763122 5_1:+17580026 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTAAGATTTTTTGAAAAA+TGG - chr5_1:17579546-17579565 Msa0721150:three_prime_UTR 10.0%
!!! TTGTTTTTTAAAATTACAAT+GGG + chr5_1:17580286-17580305 None:intergenic 10.0%
!!! ATTGTTTTTTAAAATTACAA+TGG + chr5_1:17580287-17580306 None:intergenic 10.0%
!!! TATTAAGCTATTTTTTTTTT+AGG - chr5_1:17580818-17580837 Msa0721150:three_prime_UTR 10.0%
!!! ATTAAGCTATTTTTTTTTTA+GGG - chr5_1:17580819-17580838 Msa0721150:three_prime_UTR 10.0%
!!! TATTTGTTGAATTAATTTTT+AGG - chr5_1:17581714-17581733 Msa0721150:CDS 10.0%
!! TTATATATTGAATTAAATCT+TGG + chr5_1:17582622-17582641 None:intergenic 10.0%
!! AAGATTTAATTCAATATATA+AGG - chr5_1:17582621-17582640 Msa0721150:intron 10.0%
!!! AATATTGATTTCTTTTTTTA+GGG + chr5_1:17583863-17583882 None:intergenic 10.0%
!!! AAATATTGATTTCTTTTTTT+AGG + chr5_1:17583864-17583883 None:intergenic 10.0%
!! TATATCAAGAATTATGTATT+TGG - chr5_1:17580260-17580279 Msa0721150:three_prime_UTR 15.0%
!!! GTTTTCTAAAAAAAACTATT+AGG - chr5_1:17581050-17581069 Msa0721150:three_prime_UTR 15.0%
!! TTGAACAATACATATAAATA+CGG - chr5_1:17582770-17582789 Msa0721150:intron 15.0%
!!! AGCAAAATTCATTATTTTAT+GGG + chr5_1:17582993-17583012 None:intergenic 15.0%
!! TGAAGAAAAAAATACAAAAA+AGG + chr5_1:17583779-17583798 None:intergenic 15.0%
!!! GAAAATAAGTTGCATTATTT+TGG - chr5_1:17579903-17579922 Msa0721150:three_prime_UTR 20.0%
!!! ATTATTTTGGATGGAATATT+TGG - chr5_1:17579916-17579935 Msa0721150:three_prime_UTR 20.0%
!! GATATATATATACCTCTAAT+GGG + chr5_1:17580063-17580082 None:intergenic 20.0%
!! AGAATAAAATCAAGAGAATA+TGG + chr5_1:17580147-17580166 None:intergenic 20.0%
!!! CTTCTTTAAACTTTTTAGTA+CGG + chr5_1:17580234-17580253 None:intergenic 20.0%
!! AATAGCTTAATACTTTCATT+TGG + chr5_1:17580810-17580829 None:intergenic 20.0%
!! GAGTGAACATTTAATAAATA+GGG + chr5_1:17580982-17581001 None:intergenic 20.0%
!! TAAATGATAAACAAAAGTGA+TGG + chr5_1:17581004-17581023 None:intergenic 20.0%
!!! TTTATCTTACCTATTTTAAG+AGG - chr5_1:17581020-17581039 Msa0721150:three_prime_UTR 20.0%
!! TCTAAAAAAAACTATTAGGA+TGG - chr5_1:17581054-17581073 Msa0721150:three_prime_UTR 20.0%
!! AACTATTTAGTGAAATGAAA+AGG + chr5_1:17581211-17581230 None:intergenic 20.0%
!! TATTTAGTGAAATGAAAAGT+AGG + chr5_1:17581315-17581334 None:intergenic 20.0%
!!! ATAGCAAAAAACAGTTTTTA+TGG - chr5_1:17582180-17582199 Msa0721150:intron 20.0%
!!! TAGCAAAAAACAGTTTTTAT+GGG - chr5_1:17582181-17582200 Msa0721150:intron 20.0%
!! TGAACAATACATATAAATAC+GGG - chr5_1:17582771-17582790 Msa0721150:intron 20.0%
!! ATGTGATGTTTAAACTATTT+AGG - chr5_1:17582832-17582851 Msa0721150:intron 20.0%
!!! GAGCAAAATTCATTATTTTA+TGG + chr5_1:17582994-17583013 None:intergenic 20.0%
!!! GTAAAAATCGTTTTTTTACA+CGG - chr5_1:17583138-17583157 Msa0721150:intron 20.0%
!! ATTAAAAAGCAAAAAGTCTT+GGG + chr5_1:17583282-17583301 None:intergenic 20.0%
!!! TCGAAATTTTATTTTTTACG+TGG - chr5_1:17583951-17583970 Msa0721150:CDS 20.0%
! GTGGAGTTATATATGTATTA+AGG + chr5_1:17579484-17579503 None:intergenic 25.0%
! TACATATGCAAGAAAGTTAT+AGG - chr5_1:17579517-17579536 Msa0721150:three_prime_UTR 25.0%
!!! ATAAGTTGCATTATTTTGGA+TGG - chr5_1:17579907-17579926 Msa0721150:three_prime_UTR 25.0%
! GGATATATATATACCTCTAA+TGG + chr5_1:17580064-17580083 None:intergenic 25.0%
!! TGAGTGAGTAATACATTTTT+GGG + chr5_1:17580348-17580367 None:intergenic 25.0%
!! ATGAGTGAGTAATACATTTT+TGG + chr5_1:17580349-17580368 None:intergenic 25.0%
!! TGTCCAAATTATTTCTTACA+TGG - chr5_1:17580476-17580495 Msa0721150:three_prime_UTR 25.0%
!! GTCCAAATTATTTCTTACAT+GGG - chr5_1:17580477-17580496 Msa0721150:three_prime_UTR 25.0%
! TTCCCATGTAAGAAATAATT+TGG + chr5_1:17580482-17580501 None:intergenic 25.0%
! AAAACAATAGAGAGAGAAAA+AGG - chr5_1:17580586-17580605 Msa0721150:three_prime_UTR 25.0%
! TAAAATATTTGACGAAGATG+CGG - chr5_1:17580711-17580730 Msa0721150:three_prime_UTR 25.0%
! AATAGATAGATAGATAGACT+TGG - chr5_1:17580769-17580788 Msa0721150:three_prime_UTR 25.0%
! GGAGTGAACATTTAATAAAT+AGG + chr5_1:17580983-17581002 None:intergenic 25.0%
!!! ACTTGTTATCCTCTTAAAAT+AGG + chr5_1:17581032-17581051 None:intergenic 25.0%
!!! CAAAAACGTTTAGAACTTTT+AGG - chr5_1:17581156-17581175 Msa0721150:three_prime_UTR 25.0%
! ATTTAGTGAAATGAAAAGGT+TGG + chr5_1:17581207-17581226 None:intergenic 25.0%
! AATGAAAAGTAGGTTCAAAA+TGG + chr5_1:17581305-17581324 None:intergenic 25.0%
!! GATGGTTCAATTTTTGAATT+TGG + chr5_1:17581479-17581498 None:intergenic 25.0%
! GTGTTTGTATCGAAATAATT+AGG + chr5_1:17581678-17581697 None:intergenic 25.0%
!! ATTTGCTTTAAGTGATTGTT+TGG + chr5_1:17581871-17581890 None:intergenic 25.0%
!!! ATGATTTTTTTGTGGTATTG+AGG + chr5_1:17581995-17582014 None:intergenic 25.0%
!!! TGGAAATGATGATTTTTTTG+TGG + chr5_1:17582003-17582022 None:intergenic 25.0%
! CTCTTAAAGAAAAAAGATGA+TGG + chr5_1:17582023-17582042 None:intergenic 25.0%
! TAAGAGCAATTTATTCAAAG+TGG - chr5_1:17582037-17582056 Msa0721150:CDS 25.0%
!! ACATATATAACCGATTTCAA+TGG + chr5_1:17582095-17582114 None:intergenic 25.0%
!!! TCGGTTATATATGTTAGTTT+TGG - chr5_1:17582101-17582120 Msa0721150:CDS 25.0%
!! ATTATTTCTTCTCTCTTCAT+TGG + chr5_1:17582137-17582156 None:intergenic 25.0%
! GAGAAGAAATAATTGAGATT+TGG - chr5_1:17582144-17582163 Msa0721150:intron 25.0%
!! ATTTGTTGATCAGCAAAATA+AGG + chr5_1:17582407-17582426 None:intergenic 25.0%
! CTGATCAACAAATAAATAGT+AGG - chr5_1:17582414-17582433 Msa0721150:intron 25.0%
! GAACAATACATATAAATACG+GGG - chr5_1:17582772-17582791 Msa0721150:intron 25.0%
! ACATCTTTATTCAAAGCTTA+AGG + chr5_1:17582816-17582835 None:intergenic 25.0%
! TGATGTTTAAACTATTTAGG+TGG - chr5_1:17582835-17582854 Msa0721150:intron 25.0%
!! TCGAATGTATATTTCTAACA+TGG - chr5_1:17582951-17582970 Msa0721150:intron 25.0%
! CATTAAAAAGCAAAAAGTCT+TGG + chr5_1:17583283-17583302 None:intergenic 25.0%
! AAGCATATATCAGAAGATAA+GGG - chr5_1:17583532-17583551 Msa0721150:intron 25.0%
! TCACACAAGTGTAAAAAAAA+CGG - chr5_1:17583587-17583606 Msa0721150:intron 25.0%
! AAATACAAAAAAGGACAACA+TGG + chr5_1:17583770-17583789 None:intergenic 25.0%
!!! TTTTTTAGGGTCAAAATTGT+AGG + chr5_1:17583850-17583869 None:intergenic 25.0%
!! GAACAAATCTGGAAATTTTA+TGG - chr5_1:17583914-17583933 Msa0721150:CDS 25.0%
!!! TGAAAGATATTTTGAGATGT+TGG - chr5_1:17583979-17583998 Msa0721150:CDS 25.0%
TATGTAAAATTAGTGCTGTG+TGG + chr5_1:17579503-17579522 None:intergenic 30.0%
AAAAATGGAAACACAACCTA+AGG - chr5_1:17579561-17579580 Msa0721150:three_prime_UTR 30.0%
! TGTGAAGAAGATTTTTCCTT+AGG + chr5_1:17579580-17579599 None:intergenic 30.0%
! GCTTTAGCATTGAATTTACA+TGG + chr5_1:17579633-17579652 None:intergenic 30.0%
! TAGTCTTGAATTGAAGCTTA+GGG + chr5_1:17579768-17579787 None:intergenic 30.0%
! ATAGTCTTGAATTGAAGCTT+AGG + chr5_1:17579769-17579788 None:intergenic 30.0%
!!! TATTAGTTCTTGCTGCTTTT+GGG - chr5_1:17579996-17580015 Msa0721150:three_prime_UTR 30.0%
TTGGGTCATGCTATTAAAAA+AGG + chr5_1:17580330-17580349 None:intergenic 30.0%
ATACTAAACCTTGTGAATAC+AGG + chr5_1:17580388-17580407 None:intergenic 30.0%
AAGGTTTAGTATATACCATG+AGG - chr5_1:17580396-17580415 Msa0721150:three_prime_UTR 30.0%
AGGTTTAGTATATACCATGA+GGG - chr5_1:17580397-17580416 Msa0721150:three_prime_UTR 30.0%
GTCAACAAAGTTGTCATAAA+TGG + chr5_1:17580536-17580555 None:intergenic 30.0%
! TTCATTTTCTCTCTTCTCAT+TGG - chr5_1:17580560-17580579 Msa0721150:three_prime_UTR 30.0%
AAAAAGGAAGAGAGAGAATA+TGG - chr5_1:17580602-17580621 Msa0721150:three_prime_UTR 30.0%
GTCAAAAAGTTGTAAGAAAG+TGG - chr5_1:17580653-17580672 Msa0721150:three_prime_UTR 30.0%
ATTTGCAAATAGCAATTGCT+AGG - chr5_1:17580737-17580756 Msa0721150:three_prime_UTR 30.0%
TTCAAGTGTGTTTGTATACA+TGG - chr5_1:17581274-17581293 Msa0721150:CDS 30.0%
AAAAGTAGGTTCAAAATGGA+CGG + chr5_1:17581301-17581320 None:intergenic 30.0%
TTCAAGTGTGTTTGTATACA+TGG - chr5_1:17581274-17581293 Msa0721150:CDS 30.0%
!! ATCGTGCGATTTTAATAAGA+TGG + chr5_1:17581497-17581516 None:intergenic 30.0%
!! GAATTAATTTTTAGGAGACG+AGG - chr5_1:17581722-17581741 Msa0721150:CDS 30.0%
! TTGTTTTCTCGACAAAAACT+TGG + chr5_1:17581810-17581829 None:intergenic 30.0%
!!! ATTTTTTTGTGGTATTGAGG+TGG + chr5_1:17581992-17582011 None:intergenic 30.0%
GAAATAATTGAGATTTGGCA+TGG - chr5_1:17582149-17582168 Msa0721150:intron 30.0%
! AACAGTTTTTATGGGTGATT+AGG - chr5_1:17582189-17582208 Msa0721150:intron 30.0%
TCAAACATGGTACAAGAAAA+AGG - chr5_1:17582212-17582231 Msa0721150:intron 30.0%
!!! GTGCTTTTTTGACACATAAT+GGG - chr5_1:17582330-17582349 Msa0721150:intron 30.0%
AAATAAGGCCAACAAATCAT+AGG + chr5_1:17582392-17582411 None:intergenic 30.0%
ATATGAAGGATGTTTGTGAT+AGG - chr5_1:17582468-17582487 Msa0721150:intron 30.0%
GAATATGGTGAATGATGTTA+TGG - chr5_1:17582502-17582521 Msa0721150:intron 30.0%
TGAATGATGTTATGGTGAAT+AGG - chr5_1:17582510-17582529 Msa0721150:intron 30.0%
TAAATCTTGGAAGTTGTTGT+AGG + chr5_1:17582609-17582628 None:intergenic 30.0%
TCTACTATCCCGTAAAATAA+GGG - chr5_1:17582644-17582663 Msa0721150:intron 30.0%
!!! AAAGCAATGCCCTTATTTTA+CGG + chr5_1:17582656-17582675 None:intergenic 30.0%
!! AAGAGATGTTTTTACTAGTG+AGG + chr5_1:17582686-17582705 None:intergenic 30.0%
! AATAGTTTGTGTAAATGTCG+AGG + chr5_1:17582891-17582910 None:intergenic 30.0%
AAAACTTAGACAAATCCTAG+TGG - chr5_1:17583348-17583367 Msa0721150:intron 30.0%
AGTAGTAATTTCTTTCCAAG+TGG - chr5_1:17583451-17583470 Msa0721150:intron 30.0%
GAAGCATATATCAGAAGATA+AGG - chr5_1:17583531-17583550 Msa0721150:intron 30.0%
!!! AACTAACGTAAGAGCATTTT+TGG - chr5_1:17583680-17583699 Msa0721150:intron 30.0%
! CAAATCTGGAAATTTTATGG+AGG - chr5_1:17583917-17583936 Msa0721150:CDS 30.0%
! GGAGTTAAAAGTATAAGTGT+AGG - chr5_1:17584012-17584031 Msa0721150:CDS 30.0%
! AAGTATAAGTGTAGGCATTT+TGG - chr5_1:17584020-17584039 Msa0721150:CDS 30.0%
! AGTATAAGTGTAGGCATTTT+GGG - chr5_1:17584021-17584040 Msa0721150:CDS 30.0%
!! TTTGGGTTGTAACTCAATAT+AGG - chr5_1:17584038-17584057 Msa0721150:CDS 30.0%
! AAGAGTTGGTTAGACAAAAA+AGG - chr5_1:17584131-17584150 Msa0721150:CDS 30.0%
!! AAGAAGTTGGTAAGACAAAA+TGG - chr5_1:17584323-17584342 Msa0721150:five_prime_UTR 30.0%
!! TAGTTGATGAGAAACAAATG+AGG - chr5_1:17584379-17584398 Msa0721150:five_prime_UTR 30.0%
!! TATGAATGTATTCGGTGTTG+AGG + chr5_1:17579696-17579715 None:intergenic 35.0%
GAGTCGGTTATGAATGTATT+CGG + chr5_1:17579704-17579723 None:intergenic 35.0%
CATCGTTGAATTGAATGAGT+CGG + chr5_1:17579720-17579739 None:intergenic 35.0%
! ATTGTGTCACTGAGTTTGTA+TGG - chr5_1:17579847-17579866 Msa0721150:three_prime_UTR 35.0%
!!! CTATTAGTTCTTGCTGCTTT+TGG - chr5_1:17579995-17580014 Msa0721150:three_prime_UTR 35.0%
!! CTCTAAGAGCAATTTTAGAG+TGG + chr5_1:17580085-17580104 None:intergenic 35.0%
GAATACAGGTGTGAAAAAAG+TGG + chr5_1:17580374-17580393 None:intergenic 35.0%
! TTTTCACACCTGTATTCACA+AGG - chr5_1:17580377-17580396 Msa0721150:three_prime_UTR 35.0%
ACATGGACGGATATAACATA+AGG - chr5_1:17580431-17580450 Msa0721150:three_prime_UTR 35.0%
! CGGATCGATGACTAAATTTT+TGG + chr5_1:17580929-17580948 None:intergenic 35.0%
CGCAAATAATTACCTACAAC+GGG + chr5_1:17580959-17580978 None:intergenic 35.0%
GCGCAAATAATTACCTACAA+CGG + chr5_1:17580960-17580979 None:intergenic 35.0%
AACTGTTCGTTCAAAATGGA+CGG + chr5_1:17581440-17581459 None:intergenic 35.0%
TGTGAACTGTTCGTTCAAAA+TGG + chr5_1:17581444-17581463 None:intergenic 35.0%
TAAGGTCTAGTGTGTGTATA+TGG + chr5_1:17581566-17581585 None:intergenic 35.0%
AGAAACATGCCAAGTGAATA+AGG + chr5_1:17581584-17581603 None:intergenic 35.0%
ACTCATACTCAACACATTTG+AGG - chr5_1:17581893-17581912 Msa0721150:CDS 35.0%
AGTGAATACGAATTTGTGAG+AGG + chr5_1:17581935-17581954 None:intergenic 35.0%
TGACTCTCAACCATTGAAAT+CGG - chr5_1:17582082-17582101 Msa0721150:CDS 35.0%
AGGATTATTAAGTGAGCTTG+AGG - chr5_1:17582232-17582251 Msa0721150:intron 35.0%
TTATTAAGTGAGCTTGAGGA+AGG - chr5_1:17582236-17582255 Msa0721150:intron 35.0%
AAGGAACTAGCAAGGATAAA+GGG - chr5_1:17582255-17582274 Msa0721150:intron 35.0%
! AAGGATAAAGGGTTGATTGT+TGG - chr5_1:17582266-17582285 Msa0721150:intron 35.0%
! ATAAAGGGTTGATTGTTGGA+TGG - chr5_1:17582270-17582289 Msa0721150:intron 35.0%
! TAAAGGGTTGATTGTTGGAT+GGG - chr5_1:17582271-17582290 Msa0721150:intron 35.0%
!! AGAGGAAGTTTTGTCACATA+AGG - chr5_1:17582301-17582320 Msa0721150:intron 35.0%
! GTTTTGTCACATAAGGCAAT+TGG - chr5_1:17582308-17582327 Msa0721150:intron 35.0%
!!! GGTGCTTTTTTGACACATAA+TGG - chr5_1:17582329-17582348 Msa0721150:intron 35.0%
!!! CTTTTTTGACACATAATGGG+TGG - chr5_1:17582333-17582352 Msa0721150:intron 35.0%
! TAATGGGTGGAATTCAACTT+TGG - chr5_1:17582346-17582365 Msa0721150:intron 35.0%
! GAATTCAACTTTGGAAAGTG+TGG - chr5_1:17582355-17582374 Msa0721150:intron 35.0%
AAATAGTAGGTTTGTGAGTG+AGG - chr5_1:17582427-17582446 Msa0721150:intron 35.0%
TGTTTGTGATAGGAAAGTTG+TGG - chr5_1:17582478-17582497 Msa0721150:intron 35.0%
TAGGAAAGTTGTGGAGAATA+TGG - chr5_1:17582487-17582506 Msa0721150:intron 35.0%
TGTTATGGTGAATAGGAATG+AGG - chr5_1:17582517-17582536 Msa0721150:intron 35.0%
TGTAAAATCAGCCATGGATA+TGG - chr5_1:17582544-17582563 Msa0721150:intron 35.0%
GTCTACTATCCCGTAAAATA+AGG - chr5_1:17582643-17582662 Msa0721150:intron 35.0%
!!! AAGCAATGCCCTTATTTTAC+GGG + chr5_1:17582655-17582674 None:intergenic 35.0%
!! ATGTTTTTACTAGTGAGGCA+TGG + chr5_1:17582681-17582700 None:intergenic 35.0%
TCACATTGAACCAAAATTCG+AGG - chr5_1:17582746-17582765 Msa0721150:intron 35.0%
CACATTGAACCAAAATTCGA+GGG - chr5_1:17582747-17582766 Msa0721150:intron 35.0%
! ATTGTTCAACCCTCGAATTT+TGG + chr5_1:17582759-17582778 None:intergenic 35.0%
!!! CTGGGTTTCGTCTTTTTTTT+CGG - chr5_1:17583200-17583219 Msa0721150:intron 35.0%
!!! TTTTTTTTCGGTTACACGCT+GGG - chr5_1:17583212-17583231 Msa0721150:intron 35.0%
AAAAGCAAAAAGTCTTGGGA+TGG + chr5_1:17583278-17583297 None:intergenic 35.0%
TGCAATGCATTATGCCTAAA+CGG - chr5_1:17583377-17583396 Msa0721150:intron 35.0%
! GGAAATTTTATGGAGGTTTG+TGG - chr5_1:17583924-17583943 Msa0721150:CDS 35.0%
TCTTTCAATTTCACGATGAG+TGG + chr5_1:17584115-17584134 None:intergenic 35.0%
CATCGTGAAATTGAAAGAGT+TGG - chr5_1:17584117-17584136 Msa0721150:CDS 35.0%
CTTCGTGAAATCAAAGTTGT+TGG - chr5_1:17584183-17584202 Msa0721150:CDS 35.0%
! AAGTTGTTGGTTAGACTAAG+AGG - chr5_1:17584196-17584215 Msa0721150:CDS 35.0%
TCTTTCGATTTCACGAAGAA+TGG + chr5_1:17584246-17584265 None:intergenic 35.0%
!! GAAAGAGTTGGTAACACAAA+GGG - chr5_1:17584260-17584279 Msa0721150:CDS 35.0%
!! AAAGAGTTGGTAACACAAAG+GGG - chr5_1:17584261-17584280 Msa0721150:CDS 35.0%
AACTTCTTCGTTACGAAGAA+TGG + chr5_1:17584311-17584330 None:intergenic 35.0%
ATTCTTCGTAACGAAGAAGT+TGG - chr5_1:17584310-17584329 Msa0721150:five_prime_UTR 35.0%
TCATCAACTAAACTCGATCT+AGG + chr5_1:17584369-17584388 None:intergenic 35.0%
TTTCTGTGTTCCAAACCTCT+TGG - chr5_1:17580023-17580042 Msa0721150:three_prime_UTR 40.0%
TGCAATGAACTTCCCATTAG+AGG - chr5_1:17580048-17580067 Msa0721150:three_prime_UTR 40.0%
GACGGATATAACATAAGGTG+TGG - chr5_1:17580436-17580455 Msa0721150:three_prime_UTR 40.0%
TAATTACCTACAACGGGTCA+GGG + chr5_1:17580953-17580972 None:intergenic 40.0%
ATAATTACCTACAACGGGTC+AGG + chr5_1:17580954-17580973 None:intergenic 40.0%
TTGTGTCTGTCGTCCATTTA+GGG - chr5_1:17581179-17581198 Msa0721150:three_prime_UTR 40.0%
CACACTAGACCTTATTCACT+TGG - chr5_1:17581572-17581591 Msa0721150:CDS 40.0%
!! ATTTTTAGGAGACGAGGACA+TGG - chr5_1:17581728-17581747 Msa0721150:CDS 40.0%
CGCATCATAACAAACATTCC+AGG - chr5_1:17581753-17581772 Msa0721150:CDS 40.0%
CATAACAAACATTCCAGGCA+TGG - chr5_1:17581758-17581777 Msa0721150:CDS 40.0%
GAAGTACAACCTCGTCTATA+CGG + chr5_1:17581845-17581864 None:intergenic 40.0%
TTCCCTAAACTCTACACCAT+AGG - chr5_1:17581954-17581973 Msa0721150:CDS 40.0%
! TATTGAGGTGGTGATGAAGA+GGG + chr5_1:17581980-17581999 None:intergenic 40.0%
ATGGGTGATTAGGTCAAACA+TGG - chr5_1:17582199-17582218 Msa0721150:intron 40.0%
GAAGGAACTAGCAAGGATAA+AGG - chr5_1:17582254-17582273 Msa0721150:intron 40.0%
GTGACAAAACTTCCTCTTGT+GGG + chr5_1:17582298-17582317 None:intergenic 40.0%
TGTGACAAAACTTCCTCTTG+TGG + chr5_1:17582299-17582318 None:intergenic 40.0%
! ACTTTGGAAAGTGTGGTTTG+TGG - chr5_1:17582362-17582381 Msa0721150:intron 40.0%
TGAGTGAGGTTTGGAAACTT+GGG - chr5_1:17582441-17582460 Msa0721150:intron 40.0%
!! GAAACTTGGGTTGGATATGA+AGG - chr5_1:17582454-17582473 Msa0721150:intron 40.0%
GGAGTTTGTAAAATCAGCCA+TGG - chr5_1:17582538-17582557 Msa0721150:intron 40.0%
ATCTTGGAAGTTGTTGTAGG+AGG + chr5_1:17582606-17582625 None:intergenic 40.0%
ATTTAGGTGGTTGCTTCTCT+TGG - chr5_1:17582848-17582867 Msa0721150:intron 40.0%
GTTGCTTCTCTTGGTCAAAT+TGG - chr5_1:17582857-17582876 Msa0721150:intron 40.0%
!! ACTATTCTGAAGCACGTAGT+TGG - chr5_1:17582905-17582924 Msa0721150:intron 40.0%
! AACTTGCGCAAGGGTATATT+TGG + chr5_1:17583054-17583073 None:intergenic 40.0%
!!! CTTTTTTTTCGGTTACACGC+TGG - chr5_1:17583211-17583230 Msa0721150:intron 40.0%
TGCATTGCATATGTACCACT+AGG + chr5_1:17583366-17583385 None:intergenic 40.0%
TTACAACATGCAATGCCACT+TGG + chr5_1:17583469-17583488 None:intergenic 40.0%
CATCATCATGTTGTTCCAAG+CGG - chr5_1:17583503-17583522 Msa0721150:intron 40.0%
!!! AGCATTTTTGGTATGTCTGC+AGG - chr5_1:17583692-17583711 Msa0721150:intron 40.0%
!!! GCATTTTTGGTATGTCTGCA+GGG - chr5_1:17583693-17583712 Msa0721150:intron 40.0%
GCGCAGAAATAGAACAAATC+TGG - chr5_1:17583903-17583922 Msa0721150:CDS 40.0%
! TGAGATGTTGGCAGTGTTTT+TGG - chr5_1:17583991-17584010 Msa0721150:CDS 40.0%
CTTCGTGAAATCGAAAGAGT+TGG - chr5_1:17584248-17584267 Msa0721150:CDS 40.0%
!! CGAAAGAGTTGGTAACACAA+AGG - chr5_1:17584259-17584278 Msa0721150:CDS 40.0%
CAACTAAACTCGATCTAGGA+AGG + chr5_1:17584365-17584384 None:intergenic 40.0%
!! GAATTTACATGGCCTTGTGC+TGG + chr5_1:17579622-17579641 None:intergenic 45.0%
!! CATAGTGAAGAGAAGCATCC+TGG - chr5_1:17579799-17579818 Msa0721150:intron 45.0%
!! GAAGAGAAGCATCCTGGATT+TGG - chr5_1:17579805-17579824 Msa0721150:three_prime_UTR 45.0%
AGCATCCTGGATTTGGAGAA+AGG - chr5_1:17579812-17579831 Msa0721150:three_prime_UTR 45.0%
CCTATCCTTTCTCCAAATCC+AGG + chr5_1:17579820-17579839 None:intergenic 45.0%
CCTGGATTTGGAGAAAGGAT+AGG - chr5_1:17579817-17579836 Msa0721150:three_prime_UTR 45.0%
! TGGTGACCTTGCTACTGATT+TGG - chr5_1:17579936-17579955 Msa0721150:three_prime_UTR 45.0%
!! ACTGATTTGGCTGCTGAGTT+TGG - chr5_1:17579949-17579968 Msa0721150:three_prime_UTR 45.0%
!! CTGATTTGGCTGCTGAGTTT+GGG - chr5_1:17579950-17579969 Msa0721150:three_prime_UTR 45.0%
TCATTGCACTCCAAGAGGTT+TGG + chr5_1:17580036-17580055 None:intergenic 45.0%
GAAGTTCATTGCACTCCAAG+AGG + chr5_1:17580041-17580060 None:intergenic 45.0%
TGTTTGTAGCTACTCCCTCA+TGG + chr5_1:17580414-17580433 None:intergenic 45.0%
TGAGGGAGTAGCTACAAACA+TGG - chr5_1:17580414-17580433 Msa0721150:three_prime_UTR 45.0%
GGAGTAGCTACAAACATGGA+CGG - chr5_1:17580418-17580437 Msa0721150:three_prime_UTR 45.0%
AATTACCTACAACGGGTCAG+GGG + chr5_1:17580952-17580971 None:intergenic 45.0%
GTTGTGTCTGTCGTCCATTT+AGG - chr5_1:17581178-17581197 Msa0721150:three_prime_UTR 45.0%
! GAAAAGGTTGGCTCCCTAAA+TGG + chr5_1:17581195-17581214 None:intergenic 45.0%
GAACCATATCCGTATAGACG+AGG - chr5_1:17581833-17581852 Msa0721150:CDS 45.0%
CAACCTCGTCTATACGGATA+TGG + chr5_1:17581839-17581858 None:intergenic 45.0%
ACGAATTTGTGAGAGGACTG+AGG + chr5_1:17581928-17581947 None:intergenic 45.0%
GGCCTATGGTGTAGAGTTTA+GGG + chr5_1:17581959-17581978 None:intergenic 45.0%
! GTATTGAGGTGGTGATGAAG+AGG + chr5_1:17581981-17582000 None:intergenic 45.0%
CAAAGTGGATAGAACCTGCA+TGG - chr5_1:17582052-17582071 Msa0721150:CDS 45.0%
! GTGGTGTGCCTATGATTTGT+TGG - chr5_1:17582381-17582400 Msa0721150:intron 45.0%
GTAGGTTTGTGAGTGAGGTT+TGG - chr5_1:17582432-17582451 Msa0721150:intron 45.0%
GTGAGTGAGGTTTGGAAACT+TGG - chr5_1:17582440-17582459 Msa0721150:intron 45.0%
TGAGGTTTGGAAACTTGGGT+TGG - chr5_1:17582445-17582464 Msa0721150:intron 45.0%
AGCCATGGATATGGCTAAGT+TGG - chr5_1:17582553-17582572 Msa0721150:intron 45.0%
TGCCAACTTAGCCATATCCA+TGG + chr5_1:17582558-17582577 None:intergenic 45.0%
! GTATATTTGGAACGGCTGCA+GGG + chr5_1:17583041-17583060 None:intergenic 45.0%
! GCGCAAGGGTATATTTGGAA+CGG + chr5_1:17583049-17583068 None:intergenic 45.0%
!! GCGTTAGTTAACTTGCGCAA+GGG + chr5_1:17583063-17583082 None:intergenic 45.0%
!! TGCGTTAGTTAACTTGCGCA+AGG + chr5_1:17583064-17583083 None:intergenic 45.0%
TTTCCTCGTGTCAACCGTTT+AGG + chr5_1:17583394-17583413 None:intergenic 45.0%
TAAACGGTTGACACGAGGAA+AGG - chr5_1:17583393-17583412 Msa0721150:intron 45.0%
TGTGGGGTATGAGAATCTTC+TGG + chr5_1:17583811-17583830 None:intergenic 45.0%
ACCCCACAGTTATTGTACCT+TGG - chr5_1:17583823-17583842 Msa0721150:CDS 45.0%
CCCAAGGTACAATAACTGTG+GGG + chr5_1:17583827-17583846 None:intergenic 45.0%
CCCCACAGTTATTGTACCTT+GGG - chr5_1:17583824-17583843 Msa0721150:CDS 45.0%
GCCCAAGGTACAATAACTGT+GGG + chr5_1:17583828-17583847 None:intergenic 45.0%
AGGGGATAAGCTGAGATTCA+TGG - chr5_1:17584279-17584298 Msa0721150:CDS 45.0%
!! TATATAATCATTAATATTAT+TGG - chr5_1:17580871-17580890 Msa0721150:three_prime_UTR 5.0%
ATCTTCCCATGTCCAGCACA+AGG - chr5_1:17579607-17579626 Msa0721150:three_prime_UTR 50.0%
CAGCAGCCAAATCAGTAGCA+AGG + chr5_1:17579945-17579964 None:intergenic 50.0%
CGAAGTAAGTTTGCCATGCC+TGG + chr5_1:17581774-17581793 None:intergenic 50.0%
GGGCCTATGGTGTAGAGTTT+AGG + chr5_1:17581960-17581979 None:intergenic 50.0%
GCTTGAGGAAGGAACTAGCA+AGG - chr5_1:17582247-17582266 Msa0721150:intron 50.0%
TTGTTGTAGGAGGAACCACC+AGG + chr5_1:17582596-17582615 None:intergenic 50.0%
! GGTATATTTGGAACGGCTGC+AGG + chr5_1:17583042-17583061 None:intergenic 50.0%
AGCGTGAGTTAACTCACGTG+GGG + chr5_1:17583182-17583201 None:intergenic 50.0%
CAGCGTGAGTTAACTCACGT+GGG + chr5_1:17583183-17583202 None:intergenic 50.0%
CACGTGAGTTAACTCACGCT+GGG - chr5_1:17583182-17583201 Msa0721150:intron 50.0%
ATGCCTAAACGGTTGACACG+AGG - chr5_1:17583388-17583407 Msa0721150:intron 50.0%
TATATGCTTCAGCTGCCGCT+TGG + chr5_1:17583521-17583540 None:intergenic 50.0%
GGCCCAAGGTACAATAACTG+TGG + chr5_1:17583829-17583848 None:intergenic 50.0%
GGGTCAAAATTGTAGGCCCA+AGG + chr5_1:17583843-17583862 None:intergenic 50.0%
!! TCACGATGAGTGGTGTCGAT+CGG + chr5_1:17584105-17584124 None:intergenic 50.0%
!! CATGGCCTTGTGCTGGACAT+GGG + chr5_1:17579615-17579634 None:intergenic 55.0%
!! ACATGGCCTTGTGCTGGACA+TGG + chr5_1:17579616-17579635 None:intergenic 55.0%
! GTGGTGATGAAGAGGGCCTA+TGG + chr5_1:17581973-17581992 None:intergenic 55.0%
TGGATAGAACCTGCATGGCG+TGG - chr5_1:17582057-17582076 Msa0721150:CDS 55.0%
TGTTGGATGGGTCCCACAAG+AGG - chr5_1:17582283-17582302 Msa0721150:intron 55.0%
! GCATCCAAGAGTGTGAGTCC+TGG - chr5_1:17582575-17582594 Msa0721150:intron 55.0%
! TCCAAGAGTGTGAGTCCTGG+TGG - chr5_1:17582578-17582597 Msa0721150:intron 55.0%
ACCACCAGGACTCACACTCT+TGG + chr5_1:17582582-17582601 None:intergenic 55.0%
CCAGCGTGAGTTAACTCACG+TGG + chr5_1:17583184-17583203 None:intergenic 55.0%
CCACGTGAGTTAACTCACGC+TGG - chr5_1:17583181-17583200 Msa0721150:intron 55.0%
GGGCGCGAGCGAAAAATACA+AGG - chr5_1:17583713-17583732 Msa0721150:intron 55.0%
!! CACGATGAGTGGTGTCGATC+GGG + chr5_1:17584104-17584123 None:intergenic 55.0%
!! CACGAAGAATGGCGTCGATC+AGG + chr5_1:17584235-17584254 None:intergenic 55.0%
TACCTACAACGGGTCAGGGG+CGG + chr5_1:17580949-17580968 None:intergenic 60.0%
AGAGTCAAGCCACGCCATGC+AGG + chr5_1:17582069-17582088 None:intergenic 60.0%
ATCCGCCCCTGACCCGTTGT+AGG - chr5_1:17580944-17580963 Msa0721150:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 17579457 17584415 17579457 ID=Msa0721150;Name=Msa0721150
chr5_1 mRNA 17579457 17584415 17579457 ID=Msa0721150-mRNA-1;Parent=Msa0721150;Name=Msa0721150-mRNA-1;_AED=0.05;_eAED=0.05;_QI=108|1|1|1|0.5|0.33|3|1713|475
chr5_1 exon 17579457 17579759 17579457 ID=Msa0721150-mRNA-1:exon:6673;Parent=Msa0721150-mRNA-1
chr5_1 exon 17579804 17582136 17579804 ID=Msa0721150-mRNA-1:exon:6672;Parent=Msa0721150-mRNA-1
chr5_1 exon 17583803 17584415 17583803 ID=Msa0721150-mRNA-1:exon:6671;Parent=Msa0721150-mRNA-1
chr5_1 five_prime_UTR 17584308 17584415 17584308 ID=Msa0721150-mRNA-1:five_prime_utr;Parent=Msa0721150-mRNA-1
chr5_1 CDS 17583803 17584307 17583803 ID=Msa0721150-mRNA-1:cds;Parent=Msa0721150-mRNA-1
chr5_1 CDS 17581214 17582136 17581214 ID=Msa0721150-mRNA-1:cds;Parent=Msa0721150-mRNA-1
chr5_1 three_prime_UTR 17579804 17581213 17579804 ID=Msa0721150-mRNA-1:three_prime_utr;Parent=Msa0721150-mRNA-1
chr5_1 three_prime_UTR 17579457 17579759 17579457 ID=Msa0721150-mRNA-1:three_prime_utr;Parent=Msa0721150-mRNA-1
Gene Sequence

>Msa0721150

ATGGAAACACAACCTAAGGAAAAATCTTCTTCACATGTGCTAATCTTCCCATGTCCAGCACAAGGCCATGTAAATTCAATGCTAAAGCTAGCTGAACTTCTTGCAATTCAACACATCTGCATAACTTTCCTCAACACCGAATACATTCATAACCGACTCATTCAATTCAACGATGATATTCAAGCTCTTTTAGAATGTTACCCTAAGCTTCAATTCAAGACTATCTCTGATTTTCATAGTGAAGAGAAGCATCCTGGATTTGGAGAAAGGATAGGTGATGTAATTGTGTCACTGAGTTTGTATGGTAAGTCTTTTTTGAGAGATATAATTGTCTCTGAGAAAATAAGTTGCATTATTTTGGATGGAATATTTGGTGACCTTGCTACTGATTTGGCTGCTGAGTTTGGGATACAATTGATTCATTTTCGTACTATTAGTTCTTGCTGCTTTTGGGCTTATTTCTGTGTTCCAAACCTCTTGGAGTGCAATGAACTTCCCATTAGAGGAGACGAGGACATGGATCGCATCATAACAAACATTCCAGGCATGGCAAACTTACTTCGATGTAGAGATCTTCCAAGTTTTTGTCGAGAAAACAAAAAGAACCATATCCGTATAGACGAGGTTGTACTTCGAACCAAACAATCACTTAAAGCAAATGCACTCATACTCAACACATTTGAGGATCTAGAAGCCTCAGTCCTCTCACAAATTCGTATTCACTTCCCTAAACTCTACACCATAGGCCCTCTTCATCACCACCTCAATACCACAAAAAAATCATCATTTCCATCATCTTTTTTCTTTAAGAGCAATTTATTCAAAGTGGATAGAACCTGCATGGCGTGGCTTGACTCTCAACCATTGAAATCGGTTATATATGTTAGTTTTGGAAGCACTACACCAATGAAGAGAGAAGAAATAATTGAGATTTGGCATGGTTTATTGAATAGCAAAAAACAGTTTTTATGGGTGATTAGGTCAAACATGGTACAAGAAAAAGGATTATTAAGTGAGCTTGAGGAAGGAACTAGCAAGGATAAAGGGTTGATTGTTGGATGGGTCCCACAAGAGGAAGTTTTGTCACATAAGGCAATTGGTGCTTTTTTGACACATAATGGGTGGAATTCAACTTTGGAAAGTGTGGTTTGTGGTGTGCCTATGATTTGTTGGCCTTATTTTGCTGATCAACAAATAAATAGTAGGTTTGTGAGTGAGGTTTGGAAACTTGGGTTGGATATGAAGGATGTTTGTGATAGGAAAGTTGTGGAGAATATGGTGAATGATGTTATGGTGAATAGGAATGAGGAGTTTGTAAAATCAGCCATGGATATGGCTAAGTTGGCATCCAAGAGTGTGAGTCCTGGTGGTTCCTCCTACAACAACTTCCAAGATTTAATTCAATATATAAGGTCTACTATCCCGTAA

Protein sequence

>Msa0721150

METQPKEKSSSHVLIFPCPAQGHVNSMLKLAELLAIQHICITFLNTEYIHNRLIQFNDDIQALLECYPKLQFKTISDFHSEEKHPGFGERIGDVIVSLSLYGKSFLRDIIVSEKISCIILDGIFGDLATDLAAEFGIQLIHFRTISSCCFWAYFCVPNLLECNELPIRGDEDMDRIITNIPGMANLLRCRDLPSFCRENKKNHIRIDEVVLRTKQSLKANALILNTFEDLEASVLSQIRIHFPKLYTIGPLHHHLNTTKKSSFPSSFFFKSNLFKVDRTCMAWLDSQPLKSVIYVSFGSTTPMKREEIIEIWHGLLNSKKQFLWVIRSNMVQEKGLLSELEEGTSKDKGLIVGWVPQEEVLSHKAIGAFLTHNGWNSTLESVVCGVPMICWPYFADQQINSRFVSEVWKLGLDMKDVCDRKVVENMVNDVMVNRNEEFVKSAMDMAKLASKSVSPGGSSYNNFQDLIQYIRSTIP*