Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329730 | XP_013458203.1 | 97.008 | 635 | 18 | 1 | 1 | 634 | 1 | 635 | 0.0 | 1266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329730 | sp|Q9NYV6|RRN3_HUMAN | 28.681 | 523 | 318 | 16 | 85 | 572 | 107 | 609 | 1.28e-38 | 154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329730 | A0A072UQX1 | 97.008 | 635 | 18 | 1 | 1 | 634 | 1 | 635 | 0.0 | 1266 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0628410 | Msa1329730 | 0.810461 | 1.139804e-50 | -8.615850e-47 |
| Msa0694140 | Msa1329730 | 0.805686 | 1.184194e-49 | -8.615850e-47 |
| Msa0120880 | Msa1329730 | 0.829232 | 5.776651e-55 | -8.615850e-47 |
| Msa1235610 | Msa1329730 | 0.851560 | 8.194603e-61 | -8.615850e-47 |
| Msa1277260 | Msa1329730 | 0.865238 | 6.825554e-65 | -8.615850e-47 |
| Msa1300620 | Msa1329730 | 0.934206 | 5.780162e-96 | -8.615850e-47 |
| Msa1315890 | Msa1329730 | 0.852564 | 4.249376e-61 | -8.615850e-47 |
| Msa1329730 | Msa1329750 | 0.904668 | 9.649254e-80 | -8.615850e-47 |
| Msa1329730 | Msa1385720 | 0.845155 | 4.844713e-59 | -8.615850e-47 |
| Msa1329730 | Msa1411970 | 0.836228 | 1.058343e-56 | -8.615850e-47 |
| Msa1329730 | Msa1434090 | 0.840745 | 7.224212e-58 | -8.615850e-47 |
| Msa0437020 | Msa1329730 | 0.838831 | 2.276203e-57 | -8.615850e-47 |
| Msa1085420 | Msa1329730 | 0.813662 | 2.284958e-51 | -8.615850e-47 |
| Msa1105510 | Msa1329730 | 0.803827 | 2.894817e-49 | -8.615850e-47 |
| Msa0343500 | Msa1329730 | 0.814568 | 1.442171e-51 | -8.615850e-47 |
| Msa1118860 | Msa1329730 | 0.803933 | 2.751949e-49 | -8.615850e-47 |
| Msa1123770 | Msa1329730 | 0.844616 | 6.771549e-59 | -8.615850e-47 |
| Msa1128280 | Msa1329730 | 0.805078 | 1.588239e-49 | -8.615850e-47 |
| Msa1165270 | Msa1329730 | 0.802566 | 5.278736e-49 | -8.615850e-47 |
| Msa1169910 | Msa1329730 | 0.845174 | 4.788081e-59 | -8.615850e-47 |
| Msa0531230 | Msa1329730 | 0.816074 | 6.669981e-52 | -8.615850e-47 |
| Msa0969380 | Msa1329730 | 0.806711 | 7.202668e-50 | -8.615850e-47 |
| Msa0969720 | Msa1329730 | 0.812351 | 4.429896e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329730 | MtrunA17_Chr4g0066001 | 97.008 | 635 | 18 | 1 | 1 | 634 | 1 | 635 | 0.0 | 1266 |
| Msa1329730 | MtrunA17_Chr8g0378781 | 80.519 | 77 | 15 | 0 | 205 | 281 | 1 | 77 | 7.55e-36 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329730 | AT2G34750.1 | 45.774 | 627 | 296 | 12 | 17 | 633 | 21 | 613 | 4.04e-174 | 509 |
| Msa1329730 | AT1G30590.2 | 45.513 | 624 | 300 | 13 | 17 | 634 | 17 | 606 | 5.71e-169 | 496 |
| Msa1329730 | AT1G30590.3 | 45.513 | 624 | 300 | 13 | 17 | 634 | 17 | 606 | 5.71e-169 | 496 |
| Msa1329730 | AT1G30590.1 | 45.513 | 624 | 297 | 14 | 17 | 634 | 17 | 603 | 8.16e-167 | 490 |
| Msa1329730 | AT2G39240.2 | 40.126 | 633 | 288 | 15 | 17 | 629 | 7 | 568 | 6.68e-126 | 384 |
| Msa1329730 | AT2G39240.1 | 40.126 | 633 | 288 | 15 | 17 | 629 | 7 | 568 | 6.68e-126 | 384 |
Find 156 sgRNAs with CRISPR-Local
Find 534 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAATGGTGTCTTAGAAAA+TGG | 0.144213 | 8_4:+48535199 | Msa1329730:three_prime_UTR |
| ATCTATGAAATATGGGTTTC+AGG | 0.216795 | 8_4:+48535054 | Msa1329730:CDS |
| ACGCCCAAATCTATGAAATA+TGG | 0.220265 | 8_4:+48535046 | Msa1329730:CDS |
| AGAAATTCAAAGGCGTATTT+AGG | 0.222570 | 8_4:-48528733 | None:intergenic |
| AAACCCATATTTCATAGATT+TGG | 0.238800 | 8_4:-48535050 | None:intergenic |
| TGCTTAGATGCAACTGATAT+TGG | 0.257776 | 8_4:+48535522 | Msa1329730:three_prime_UTR |
| ATTCCTGAGTTAGGGTTCTA+AGG | 0.266222 | 8_4:+48527732 | Msa1329730:five_prime_UTR |
| CAACGAAGATTTATCTGTTA+TGG | 0.271233 | 8_4:+48527782 | Msa1329730:CDS |
| TCCTGGTTGTAGGTGGAAAT+TGG | 0.276044 | 8_4:+48529581 | Msa1329730:intron |
| CAGCTATTGTAGCATTTGTT+TGG | 0.289410 | 8_4:+48535477 | Msa1329730:three_prime_UTR |
| TAGAAAATGGGCACTCCTAT+TGG | 0.306255 | 8_4:+48535212 | Msa1329730:three_prime_UTR |
| AACCCATATTTCATAGATTT+GGG | 0.308026 | 8_4:-48535049 | None:intergenic |
| GGCTCCTTAGCGAAACGTTT+TGG | 0.310138 | 8_4:-48528883 | None:intergenic |
| AGAAAATGGGCACTCCTATT+GGG | 0.313507 | 8_4:+48535213 | Msa1329730:three_prime_UTR |
| GTTAGGGTTCTAAGGGAGTA+TGG | 0.319269 | 8_4:+48527740 | Msa1329730:exon |
| AGGATTAAGATTCCTGAGTT+AGG | 0.324453 | 8_4:+48527723 | Msa1329730:intron |
| TTCAACAAACATGGATCAAA+TGG | 0.328326 | 8_4:-48534665 | None:intergenic |
| AAATGCCCATGGAGCTAATC+TGG | 0.332385 | 8_4:+48534283 | Msa1329730:CDS |
| ATGCTTGAGAGCGGTGAAAT+TGG | 0.343084 | 8_4:+48529424 | Msa1329730:CDS |
| GTACCACAGAGTTGTTAAAT+AGG | 0.350184 | 8_4:+48532896 | Msa1329730:CDS |
| TCACGACGCTGCTAAACTTT+TGG | 0.352317 | 8_4:+48528171 | Msa1329730:CDS |
| GCGGATCTTTCCAAGGCTTT+CGG | 0.378275 | 8_4:+48534614 | Msa1329730:CDS |
| CCCTAAAATTGGTGAGAGTC+AGG | 0.383755 | 8_4:-48527601 | None:intergenic |
| TGGAGTTGACATGAAGAATA+AGG | 0.387882 | 8_4:+48528768 | Msa1329730:CDS |
| GGATATGAATGATTATGATA+TGG | 0.391946 | 8_4:+48534967 | Msa1329730:CDS |
| TCTGAAACACATAGCTGATT+TGG | 0.393971 | 8_4:+48528813 | Msa1329730:CDS |
| TAAATTGTTCGTTACCTTCA+AGG | 0.395606 | 8_4:-48534322 | None:intergenic |
| GGCATACTGTGGACAACTAT+TGG | 0.407503 | 8_4:-48528862 | None:intergenic |
| AAGCGGCATTACCTAGTAAT+AGG | 0.412363 | 8_4:-48533399 | None:intergenic |
| AGTAGAGGAATTTCTAAAAC+AGG | 0.414435 | 8_4:+48534532 | Msa1329730:CDS |
| CGCCCAAATCTATGAAATAT+GGG | 0.416002 | 8_4:+48535047 | Msa1329730:CDS |
| AAAATTTACACCACATCCTT+CGG | 0.424276 | 8_4:-48533334 | None:intergenic |
| GGATTAAGATTCCTGAGTTA+GGG | 0.426266 | 8_4:+48527724 | Msa1329730:intron |
| TATTAATACTTACAAGATAG+TGG | 0.427707 | 8_4:-48535333 | None:intergenic |
| TGATGAGAAATATTATAGTA+TGG | 0.433744 | 8_4:+48529682 | Msa1329730:CDS |
| GAACAATTTGCAAGGCAATC+AGG | 0.437527 | 8_4:+48532918 | Msa1329730:CDS |
| GCTTGAGCTCATCGTGTCAT+TGG | 0.439526 | 8_4:+48528548 | Msa1329730:CDS |
| CTTTCGCATGAGATCATTGA+TGG | 0.440574 | 8_4:+48534230 | Msa1329730:CDS |
| ATAAGCTTCACTTTAAGTCT+AGG | 0.441192 | 8_4:-48534258 | None:intergenic |
| TGTTTCACAGGCTGCTTCAA+AGG | 0.445012 | 8_4:+48528660 | Msa1329730:intron |
| AAAACTACAACTGCCCCAAT+AGG | 0.447061 | 8_4:-48535227 | None:intergenic |
| TGACCATCTCCAGCTACTTA+AGG | 0.454991 | 8_4:+48534828 | Msa1329730:intron |
| AGCTTTCGAGATTGAGCTTG+TGG | 0.456347 | 8_4:+48528472 | Msa1329730:intron |
| GGGATTATGCTCCAACTGAT+AGG | 0.461972 | 8_4:+48528493 | Msa1329730:CDS |
| GAAGTTTCTTTCATCTGAGT+TGG | 0.464213 | 8_4:+48533716 | Msa1329730:CDS |
| CGAGCTCGTAAGTCAACTTA+GGG | 0.466178 | 8_4:+48527555 | Msa1329730:five_prime_UTR |
| GTGTTAATCCTCCTATTACT+AGG | 0.469232 | 8_4:+48533388 | Msa1329730:CDS |
| GTTTCACAGGCTGCTTCAAA+GGG | 0.472233 | 8_4:+48528661 | Msa1329730:intron |
| AACGAGGAGCTCAGTGATAG+TGG | 0.472727 | 8_4:+48534902 | Msa1329730:CDS |
| TAAGATAGAAATTCAAGTCC+AGG | 0.475118 | 8_4:-48535439 | None:intergenic |
| ACAATGGTGTCTTAGAAAAT+GGG | 0.477975 | 8_4:+48535200 | Msa1329730:three_prime_UTR |
| TGGATGGGATGGCAAGATAC+AGG | 0.478954 | 8_4:+48529601 | Msa1329730:CDS |
| GCGAGCTCGTAAGTCAACTT+AGG | 0.479063 | 8_4:+48527554 | Msa1329730:five_prime_UTR |
| ATTTATCCCACCGAAAGCCT+TGG | 0.486236 | 8_4:-48534624 | None:intergenic |
| AGAAATTCCTCTACTACGCT+AGG | 0.486325 | 8_4:-48534524 | None:intergenic |
| GCTTTCGAGATTGAGCTTGT+GGG | 0.486729 | 8_4:+48528473 | Msa1329730:intron |
| ATGTTTCCAGATTAGCTCCA+TGG | 0.488983 | 8_4:-48534289 | None:intergenic |
| CTGTCTCATAAACGAGCGTT+AGG | 0.489500 | 8_4:-48527498 | None:intergenic |
| GATAAATCTTCGTTGACAAT+CGG | 0.489575 | 8_4:-48527774 | None:intergenic |
| AGATACCCTTCTTGCAGTCT+CGG | 0.490560 | 8_4:+48527851 | Msa1329730:CDS |
| GATCTTTCCAAGGCTTTCGG+TGG | 0.493557 | 8_4:+48534617 | Msa1329730:CDS |
| CTCCATTGCAAATATGCACT+TGG | 0.495884 | 8_4:-48529630 | None:intergenic |
| AAATTGTTCGTTACCTTCAA+GGG | 0.496820 | 8_4:-48534321 | None:intergenic |
| GGTGAAATTGGAGAAATTGT+TGG | 0.498711 | 8_4:+48529436 | Msa1329730:CDS |
| GTGATAATCGCAAGGGAGCA+AGG | 0.499704 | 8_4:-48528840 | None:intergenic |
| GAAGCGATTCATGCTGGATA+GGG | 0.499853 | 8_4:-48528349 | None:intergenic |
| ATGAATGATTATGATATGGC+CGG | 0.501292 | 8_4:+48534971 | Msa1329730:CDS |
| AGAAGCGATTCATGCTGGAT+AGG | 0.502609 | 8_4:-48528350 | None:intergenic |
| CGAGTGGAGTGCAGAAGCCA+AGG | 0.503545 | 8_4:+48527521 | Msa1329730:five_prime_UTR |
| GAAGAATAAGGTTCTGCCTC+GGG | 0.505488 | 8_4:+48528780 | Msa1329730:CDS |
| ACATAAATTGAATCCCTTGA+AGG | 0.505777 | 8_4:+48534308 | Msa1329730:CDS |
| TTCCTGAGTTAGGGTTCTAA+GGG | 0.506384 | 8_4:+48527733 | Msa1329730:five_prime_UTR |
| GCATCATATTTCCTATCAGT+TGG | 0.506860 | 8_4:-48528504 | None:intergenic |
| CGTGGATAAGTTGATAGAGT+TGG | 0.510675 | 8_4:+48529480 | Msa1329730:CDS |
| ATTAATACTTACAAGATAGT+GGG | 0.511025 | 8_4:-48535332 | None:intergenic |
| TTTCATAGATTTGGGCGTGA+TGG | 0.514294 | 8_4:-48535041 | None:intergenic |
| AGCTCGCGTAGTACTTGCCT+TGG | 0.516428 | 8_4:-48527538 | None:intergenic |
| TAAAACATTACAAAATTGAC+AGG | 0.517336 | 8_4:-48535156 | None:intergenic |
| TGTTTCCAGATTAGCTCCAT+GGG | 0.520405 | 8_4:-48534288 | None:intergenic |
| AAGAAAGAAGCGATTCATGC+TGG | 0.521142 | 8_4:-48528355 | None:intergenic |
| ATAGCAAGTCTTTGACGCCC+TGG | 0.523137 | 8_4:+48535421 | Msa1329730:three_prime_UTR |
| GCTCGAGGCGGATCTTTCCA+AGG | 0.526827 | 8_4:+48534607 | Msa1329730:CDS |
| ATATGATGCAGCTGATATCA+TGG | 0.528281 | 8_4:+48528518 | Msa1329730:CDS |
| AGATTTATCTGTTATGGAGG+AGG | 0.529140 | 8_4:+48527788 | Msa1329730:CDS |
| GGTTGTAGGTGGAAATTGGA+TGG | 0.531254 | 8_4:+48529585 | Msa1329730:intron |
| TAGGTGGAAATTGGATGGGA+TGG | 0.531448 | 8_4:+48529590 | Msa1329730:intron |
| TCAACAAACATGGATCAAAT+GGG | 0.531713 | 8_4:-48534664 | None:intergenic |
| ATATGGGTTTCAGGCACAGA+TGG | 0.533433 | 8_4:+48535063 | Msa1329730:CDS |
| ATCAACTTATCCACGAGTGC+AGG | 0.533943 | 8_4:-48529472 | None:intergenic |
| ATCTTTCCAAGGCTTTCGGT+GGG | 0.536074 | 8_4:+48534618 | Msa1329730:CDS |
| AATTCAAAGGCGTATTTAGG+AGG | 0.538124 | 8_4:-48528730 | None:intergenic |
| ATTCTTGTGGTTCAGGATGG+TGG | 0.540191 | 8_4:+48528094 | Msa1329730:intron |
| TAGCATTTGTTTGGAGCTAG+AGG | 0.547346 | 8_4:+48535486 | Msa1329730:three_prime_UTR |
| GGAATTTCTAAAACAGGCAA+AGG | 0.549923 | 8_4:+48534538 | Msa1329730:CDS |
| TAAAACAGGCAAAGGCTGCT+CGG | 0.551011 | 8_4:+48534546 | Msa1329730:CDS |
| TACAATGCTACCTGCACTCG+TGG | 0.554508 | 8_4:+48529462 | Msa1329730:CDS |
| CTTGACCAGCGGACAAAATG+TGG | 0.555293 | 8_4:-48534851 | None:intergenic |
| TCTTGAATGCTGTCAAAGCA+AGG | 0.555849 | 8_4:+48532984 | Msa1329730:CDS |
| GGTTTCAGGCACAGATGGAA+GGG | 0.558054 | 8_4:+48535068 | Msa1329730:CDS |
| GGGTTTCAGGCACAGATGGA+AGG | 0.558736 | 8_4:+48535067 | Msa1329730:CDS |
| TGAAGAATAAGGTTCTGCCT+CGG | 0.559544 | 8_4:+48528779 | Msa1329730:CDS |
| CTGTCAAAGCAAGGGCCGAT+TGG | 0.561772 | 8_4:+48532993 | Msa1329730:CDS |
| AAGCAAGGGCCGATTGGCTG+AGG | 0.562906 | 8_4:+48532999 | Msa1329730:CDS |
| TTGGGAATACCTCAGCCAAT+CGG | 0.566052 | 8_4:-48533008 | None:intergenic |
| CGAAGATTTATCTGTTATGG+AGG | 0.567769 | 8_4:+48527785 | Msa1329730:CDS |
| TCAGTTACCTCAACAGTGAA+AGG | 0.568367 | 8_4:-48535278 | None:intergenic |
| TTAAATAGGAACAATTTGCA+AGG | 0.569913 | 8_4:+48532910 | Msa1329730:CDS |
| AACTATTGGTGATAATCGCA+AGG | 0.570156 | 8_4:-48528848 | None:intergenic |
| TGCCAAGTGCATATTTGCAA+TGG | 0.570882 | 8_4:+48529628 | Msa1329730:CDS |
| AGCATTTGTTTGGAGCTAGA+GGG | 0.572070 | 8_4:+48535487 | Msa1329730:three_prime_UTR |
| TTAGGGTTCTAAGGGAGTAT+GGG | 0.573209 | 8_4:+48527741 | Msa1329730:exon |
| AAGACCCGCTTCAACACTCC+CGG | 0.576390 | 8_4:-48534990 | None:intergenic |
| GATGTTCTATGCATGCGCAT+TGG | 0.580066 | 8_4:+48533308 | Msa1329730:CDS |
| TGATAATCGCAAGGGAGCAA+GGG | 0.586042 | 8_4:-48528839 | None:intergenic |
| TGAATGATTATGATATGGCC+GGG | 0.586844 | 8_4:+48534972 | Msa1329730:CDS |
| AAGATAGAAATTCAAGTCCA+GGG | 0.590326 | 8_4:-48535438 | None:intergenic |
| ATGCTGGATAGGGTCAATGT+AGG | 0.592083 | 8_4:-48528339 | None:intergenic |
| TCTCATAAACGAGCGTTAGG+AGG | 0.597211 | 8_4:-48527495 | None:intergenic |
| ACTGTTGAGGTAACTGAACA+TGG | 0.597240 | 8_4:+48535284 | Msa1329730:three_prime_UTR |
| CGGCATTACCTAGTAATAGG+AGG | 0.597341 | 8_4:-48533396 | None:intergenic |
| ACTATCACTGAGCTCCTCGT+TGG | 0.597389 | 8_4:-48534900 | None:intergenic |
| CTCGTTTATGAGACAGCGAG+TGG | 0.597848 | 8_4:+48527505 | Msa1329730:five_prime_UTR |
| ATGTTTGCCTAGCGTAGTAG+AGG | 0.599342 | 8_4:+48534517 | Msa1329730:CDS |
| GAAAATGGGCACTCCTATTG+GGG | 0.599657 | 8_4:+48535214 | Msa1329730:three_prime_UTR |
| GCTTACCGAGACTGCAAGAA+GGG | 0.601568 | 8_4:-48527856 | None:intergenic |
| GTTGTAGGTGGAAATTGGAT+GGG | 0.602234 | 8_4:+48529586 | Msa1329730:intron |
| AGCTCGTAAGTCAACTTAGG+GGG | 0.602346 | 8_4:+48527557 | Msa1329730:five_prime_UTR |
| ATTTCACTTTCGATCACACA+AGG | 0.602906 | 8_4:-48535548 | None:intergenic |
| ATGGCCGGGAGTGTTGAAGC+GGG | 0.607938 | 8_4:+48534986 | Msa1329730:CDS |
| GAAGCTTATCAAAATGCCCA+TGG | 0.616331 | 8_4:+48534272 | Msa1329730:CDS |
| GGCTTACCGAGACTGCAAGA+AGG | 0.617000 | 8_4:-48527857 | None:intergenic |
| TATGCCAAAACGTTTCGCTA+AGG | 0.621248 | 8_4:+48528879 | Msa1329730:CDS |
| CTCCCTTAGAACCCTAACTC+AGG | 0.623281 | 8_4:-48527735 | None:intergenic |
| TTCAGAGCAGCATGCACCCG+AGG | 0.627619 | 8_4:-48528796 | None:intergenic |
| ATACAAGTCAAAATTTGCCC+AGG | 0.628013 | 8_4:+48533181 | Msa1329730:CDS |
| GAAATTGGAGAAATTGTTGG+TGG | 0.630468 | 8_4:+48529439 | Msa1329730:CDS |
| GATAATCGCAAGGGAGCAAG+GGG | 0.631795 | 8_4:-48528838 | None:intergenic |
| CTTGAATGCTGTCAAAGCAA+GGG | 0.633580 | 8_4:+48532985 | Msa1329730:CDS |
| TCGCATGAGATCATTGATGG+AGG | 0.634684 | 8_4:+48534233 | Msa1329730:CDS |
| GTTCCTATTTAACAACTCTG+TGG | 0.638060 | 8_4:-48532899 | None:intergenic |
| GTTTGTTGAAGAAAAGTGAA+AGG | 0.640363 | 8_4:+48534678 | Msa1329730:CDS |
| TATGGCCGGGAGTGTTGAAG+CGG | 0.646112 | 8_4:+48534985 | Msa1329730:CDS |
| GCATGCGCATTGGATTCCGA+AGG | 0.647857 | 8_4:+48533318 | Msa1329730:CDS |
| TGGTTGCTAACATCATACAA+AGG | 0.652099 | 8_4:+48533736 | Msa1329730:CDS |
| GAGCTCGTAAGTCAACTTAG+GGG | 0.654227 | 8_4:+48527556 | Msa1329730:five_prime_UTR |
| TTAATACTTACAAGATAGTG+GGG | 0.654456 | 8_4:-48535331 | None:intergenic |
| GCATTGGATTCCGAAGGATG+TGG | 0.661172 | 8_4:+48533324 | Msa1329730:CDS |
| AAACATCTCTGTGAGGACCA+TGG | 0.662377 | 8_4:-48533358 | None:intergenic |
| ACTATTGGTGATAATCGCAA+GGG | 0.679273 | 8_4:-48528847 | None:intergenic |
| GCTCGTAAGTCAACTTAGGG+GGG | 0.680183 | 8_4:+48527558 | Msa1329730:five_prime_UTR |
| TTTCGATGATTTGCTCGAGG+CGG | 0.688171 | 8_4:+48534595 | Msa1329730:CDS |
| ATGGGATGGCAAGATACAGG+AGG | 0.711153 | 8_4:+48529604 | Msa1329730:CDS |
| GCAGCTACTTATCAACACAA+TGG | 0.714076 | 8_4:+48535184 | Msa1329730:three_prime_UTR |
| ATGAATCAAACATCTCTGTG+AGG | 0.746973 | 8_4:-48533365 | None:intergenic |
| AATATGTTAATGCTTGAGAG+CGG | 0.775120 | 8_4:+48529415 | Msa1329730:CDS |
| ATATGATACATATGCCAACG+AGG | 0.781154 | 8_4:+48534886 | Msa1329730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTGATACTATTTTAAT+AGG | + | chr8_4:48528228-48528247 | Msa1329730:intron | 10.0% |
| !! | TTAAATAGATAACATAATAT+TGG | - | chr8_4:48529714-48529733 | None:intergenic | 10.0% |
| !!! | TTAATAGCTTAATTTTTTTA+AGG | + | chr8_4:48530136-48530155 | Msa1329730:intron | 10.0% |
| !!! | ATTTAAATATTAACTTGTTT+TGG | + | chr8_4:48532381-48532400 | Msa1329730:intron | 10.0% |
| !!! | TTTAAATATTAACTTGTTTT+GGG | + | chr8_4:48532382-48532401 | Msa1329730:intron | 10.0% |
| !!! | ATAATTCAATTAGCTTTTAA+CGG | + | chr8_4:48527658-48527677 | Msa1329730:intron | 15.0% |
| !! | TAACCAATAAATATCATTAA+AGG | + | chr8_4:48528035-48528054 | Msa1329730:intron | 15.0% |
| !! | TCATAAACATTAATAAAATG+TGG | - | chr8_4:48528277-48528296 | None:intergenic | 15.0% |
| !! | AAGTTCAATAAATATTTGAA+TGG | - | chr8_4:48528625-48528644 | None:intergenic | 15.0% |
| !!! | AATATATGTTGATTTTTGTT+TGG | + | chr8_4:48528684-48528703 | Msa1329730:CDS | 15.0% |
| !! | GACAAATAGAATTAATTTAT+TGG | - | chr8_4:48529563-48529582 | None:intergenic | 15.0% |
| !!! | AGTATTTTTTGTTGAAATTT+GGG | - | chr8_4:48530054-48530073 | None:intergenic | 15.0% |
| !!! | AAGTATTTTTTGTTGAAATT+TGG | - | chr8_4:48530055-48530074 | None:intergenic | 15.0% |
| !! | AATGATAAGTTATTAAAGAA+CGG | + | chr8_4:48532279-48532298 | Msa1329730:intron | 15.0% |
| !!! | GTTAATATTTAAATTTTCAC+AGG | - | chr8_4:48532375-48532394 | None:intergenic | 15.0% |
| !! | ATTATTAGTATGTTATAACT+TGG | + | chr8_4:48532851-48532870 | Msa1329730:intron | 15.0% |
| !! | AAAAAAACTAACCCTAAAAT+TGG | - | chr8_4:48527615-48527634 | None:intergenic | 20.0% |
| !!! | ATATTTTATCTAAACATTGC+AGG | + | chr8_4:48527703-48527722 | Msa1329730:intron | 20.0% |
| !! | CTTCCTTTAATGATATTTAT+TGG | - | chr8_4:48528041-48528060 | None:intergenic | 20.0% |
| !! | TAAAATTACTGAGATATTGT+TGG | - | chr8_4:48528595-48528614 | None:intergenic | 20.0% |
| !!! | AATATCTCAGTAATTTTAGA+CGG | + | chr8_4:48528597-48528616 | Msa1329730:intron | 20.0% |
| !!! | CGTTTTGATTTCAAATATAA+TGG | + | chr8_4:48529228-48529247 | Msa1329730:intron | 20.0% |
| !! | ACTTATTCGAATAATGATAA+AGG | + | chr8_4:48529255-48529274 | Msa1329730:intron | 20.0% |
| !! | CTTATTCGAATAATGATAAA+GGG | + | chr8_4:48529256-48529275 | Msa1329730:intron | 20.0% |
| !! | TTGACAAATTAAAGCAAAAA+TGG | - | chr8_4:48529301-48529320 | None:intergenic | 20.0% |
| !!! | TGTTAAAGAAATCTAGTTTT+AGG | - | chr8_4:48529328-48529347 | None:intergenic | 20.0% |
| !! | TAAATTAATTCTATTTGTCC+TGG | + | chr8_4:48529564-48529583 | Msa1329730:intron | 20.0% |
| !! | TGATGAGAAATATTATAGTA+TGG | + | chr8_4:48529682-48529701 | Msa1329730:CDS | 20.0% |
| !! | AGAAATATTATAGTATGGTA+TGG | + | chr8_4:48529687-48529706 | Msa1329730:intron | 20.0% |
| !!! | GTATTTTTTGTTGAAATTTG+GGG | - | chr8_4:48530053-48530072 | None:intergenic | 20.0% |
| !!! | AATTTTTTTAAGGATGAGTT+AGG | + | chr8_4:48530146-48530165 | Msa1329730:intron | 20.0% |
| !!! | TTATTTTTTGTTGCAATTTG+TGG | - | chr8_4:48530172-48530191 | None:intergenic | 20.0% |
| !!! | AAAAGTTAAGCTATTTTAGA+TGG | - | chr8_4:48530370-48530389 | None:intergenic | 20.0% |
| !!! | CTAAAATAGCTTAACTTTTT+TGG | + | chr8_4:48530371-48530390 | Msa1329730:intron | 20.0% |
| !! | TTATAAAATGTCAATGTTTG+AGG | + | chr8_4:48530614-48530633 | Msa1329730:intron | 20.0% |
| !! | TATGTGCAATGAAAAAAAAA+AGG | - | chr8_4:48531146-48531165 | None:intergenic | 20.0% |
| !!! | TTGATCTTTTTTTTTTTGCT+CGG | - | chr8_4:48531638-48531657 | None:intergenic | 20.0% |
| !! | AAAGAATGAAAAAATGACAT+AGG | + | chr8_4:48531860-48531879 | Msa1329730:intron | 20.0% |
| !! | ATAGACAAATCTTATAATAC+AGG | - | chr8_4:48532149-48532168 | None:intergenic | 20.0% |
| !! | TGGAATAATTAAATAGCAAA+TGG | + | chr8_4:48532225-48532244 | Msa1329730:intron | 20.0% |
| !! | ATAATTAAATAGCAAATGGA+TGG | + | chr8_4:48532229-48532248 | Msa1329730:intron | 20.0% |
| !!! | GTTTGAATTTCTTTTACAAA+AGG | + | chr8_4:48532433-48532452 | Msa1329730:intron | 20.0% |
| !!! | ATTTAACAGTAACAAGTTTT+TGG | + | chr8_4:48532662-48532681 | Msa1329730:intron | 20.0% |
| !! | GTTAATTGAATAACTTGATT+AGG | + | chr8_4:48533112-48533131 | Msa1329730:intron | 20.0% |
| !! | TAAAACATTACAAAATTGAC+AGG | - | chr8_4:48535159-48535178 | None:intergenic | 20.0% |
| !!! | TGTCAATTTTGTAATGTTTT+AGG | + | chr8_4:48535158-48535177 | Msa1329730:three_prime_UTR | 20.0% |
| !! | ATTAATACTTACAAGATAGT+GGG | - | chr8_4:48535335-48535354 | None:intergenic | 20.0% |
| !! | TATTAATACTTACAAGATAG+TGG | - | chr8_4:48535336-48535355 | None:intergenic | 20.0% |
| !!! | AAAAGAGTCTGAGATTTTTA+GGG | - | chr8_4:48527472-48527491 | None:intergenic | 25.0% |
| ! | AATATTCTCAGCAATCAAAA+GGG | - | chr8_4:48527688-48527707 | None:intergenic | 25.0% |
| ! | AAATATTCTCAGCAATCAAA+AGG | - | chr8_4:48527689-48527708 | None:intergenic | 25.0% |
| !!! | ATACTATTTTAATAGGCCTA+TGG | + | chr8_4:48528235-48528254 | Msa1329730:intron | 25.0% |
| !! | ACAAACTATAAACTGATTCT+TGG | + | chr8_4:48528401-48528420 | Msa1329730:intron | 25.0% |
| !! | AGCAAGATAATTTTGTGATA+TGG | + | chr8_4:48528425-48528444 | Msa1329730:intron | 25.0% |
| !! | ATATCTCAGTAATTTTAGAC+GGG | + | chr8_4:48528598-48528617 | Msa1329730:intron | 25.0% |
| !! | CTTTGAATTTCTGAAAAATG+CGG | + | chr8_4:48528744-48528763 | Msa1329730:CDS | 25.0% |
| ! | AATTTGCATTTCCAGTATAA+GGG | + | chr8_4:48528915-48528934 | Msa1329730:intron | 25.0% |
| ! | TTTGACTGAAAATTTGACAA+GGG | - | chr8_4:48529521-48529540 | None:intergenic | 25.0% |
| ! | AATACGATATTGAAACATGT+TGG | + | chr8_4:48529823-48529842 | Msa1329730:intron | 25.0% |
| !! | TCACTTAATAGCTTAACTTT+TGG | + | chr8_4:48530082-48530101 | Msa1329730:intron | 25.0% |
| !! | TCACTTAATAGCTTAACTTT+TGG | + | chr8_4:48530082-48530101 | Msa1329730:intron | 25.0% |
| ! | TACAAGTTAGTCACAAAATA+GGG | - | chr8_4:48530799-48530818 | None:intergenic | 25.0% |
| ! | ATACAAGTTAGTCACAAAAT+AGG | - | chr8_4:48530800-48530819 | None:intergenic | 25.0% |
| !! | TTGTATAAAGCGCTTTAATA+GGG | + | chr8_4:48530814-48530833 | Msa1329730:intron | 25.0% |
| ! | AGAAATCTAGCTATTAGATT+CGG | + | chr8_4:48530864-48530883 | Msa1329730:intron | 25.0% |
| ! | TTATAAGTTTCACTGGTATA+TGG | + | chr8_4:48531025-48531044 | Msa1329730:intron | 25.0% |
| ! | TCAAGATAACAAAAATCTGA+TGG | + | chr8_4:48531180-48531199 | Msa1329730:intron | 25.0% |
| !! | GAATAAGCAATTTTATACCT+GGG | - | chr8_4:48531466-48531485 | None:intergenic | 25.0% |
| !! | TGAATAAGCAATTTTATACC+TGG | - | chr8_4:48531467-48531486 | None:intergenic | 25.0% |
| ! | AAATTCTAAACCCTAAATGT+AGG | + | chr8_4:48531674-48531693 | Msa1329730:intron | 25.0% |
| ! | AATTCTAAACCCTAAATGTA+GGG | + | chr8_4:48531675-48531694 | Msa1329730:intron | 25.0% |
| ! | ACAAAGAATATCAAGTATAG+TGG | + | chr8_4:48532205-48532224 | Msa1329730:intron | 25.0% |
| ! | ATAAGTTATTAAAGAACGGT+TGG | + | chr8_4:48532283-48532302 | Msa1329730:intron | 25.0% |
| ! | GAAAAAGTAACATATCTTGT+GGG | - | chr8_4:48532325-48532344 | None:intergenic | 25.0% |
| ! | TGAAAAAGTAACATATCTTG+TGG | - | chr8_4:48532326-48532345 | None:intergenic | 25.0% |
| ! | AAATTGAGCTTCTATCAAAT+CGG | - | chr8_4:48532472-48532491 | None:intergenic | 25.0% |
| ! | TCAATAAACAATTTCTTGCA+AGG | - | chr8_4:48532586-48532605 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTCATCATCTTTT+GGG | + | chr8_4:48532613-48532632 | Msa1329730:intron | 25.0% |
| ! | TGTTGTATTTATCATACATC+AGG | + | chr8_4:48532689-48532708 | Msa1329730:intron | 25.0% |
| ! | TTAAATAGGAACAATTTGCA+AGG | + | chr8_4:48532910-48532929 | Msa1329730:CDS | 25.0% |
| ! | AAACATAATACATGCAAGTT+AGG | - | chr8_4:48533232-48533251 | None:intergenic | 25.0% |
| !!! | ATGTTTTAAGAAAAGCACAA+GGG | - | chr8_4:48533560-48533579 | None:intergenic | 25.0% |
| !!! | AATGTTTTAAGAAAAGCACA+AGG | - | chr8_4:48533561-48533580 | None:intergenic | 25.0% |
| !! | TGCTTTTCTTAAAACATTCT+TGG | + | chr8_4:48533563-48533582 | Msa1329730:intron | 25.0% |
| ! | TAATTGTCTTGATATGTTTC+AGG | + | chr8_4:48533652-48533671 | Msa1329730:intron | 25.0% |
| ! | AAAACACGTTAATGTCAATA+GGG | - | chr8_4:48534023-48534042 | None:intergenic | 25.0% |
| ! | AAAAACACGTTAATGTCAAT+AGG | - | chr8_4:48534024-48534043 | None:intergenic | 25.0% |
| ! | TACTAGACAAAATAAAACGA+GGG | - | chr8_4:48534078-48534097 | None:intergenic | 25.0% |
| ! | TTACTAGACAAAATAAAACG+AGG | - | chr8_4:48534079-48534098 | None:intergenic | 25.0% |
| !!! | ACTTTTAACTTTATTTGACC+TGG | + | chr8_4:48534133-48534152 | Msa1329730:intron | 25.0% |
| !!! | GTTGCTCATTTTATTTGTTT+TGG | + | chr8_4:48534178-48534197 | Msa1329730:intron | 25.0% |
| ! | ACCTGTCAAAAATTTATATC+AGG | - | chr8_4:48534497-48534516 | None:intergenic | 25.0% |
| ! | GGATATGAATGATTATGATA+TGG | + | chr8_4:48534967-48534986 | Msa1329730:CDS | 25.0% |
| ! | AACCCATATTTCATAGATTT+GGG | - | chr8_4:48535052-48535071 | None:intergenic | 25.0% |
| ! | AAACCCATATTTCATAGATT+TGG | - | chr8_4:48535053-48535072 | None:intergenic | 25.0% |
| ! | TTAATACTTACAAGATAGTG+GGG | - | chr8_4:48535334-48535353 | None:intergenic | 25.0% |
| !! | CAAAAGAGTCTGAGATTTTT+AGG | - | chr8_4:48527473-48527492 | None:intergenic | 30.0% |
| TAATTGAATTATGCGAAGGA+TGG | - | chr8_4:48527650-48527669 | None:intergenic | 30.0% | |
| AAGCTAATTGAATTATGCGA+AGG | - | chr8_4:48527654-48527673 | None:intergenic | 30.0% | |
| GATAAATCTTCGTTGACAAT+CGG | - | chr8_4:48527777-48527796 | None:intergenic | 30.0% | |
| CAACGAAGATTTATCTGTTA+TGG | + | chr8_4:48527782-48527801 | Msa1329730:CDS | 30.0% | |
| AGACACGAATCAATAATTTG+AGG | - | chr8_4:48527953-48527972 | None:intergenic | 30.0% | |
| !! | ATTGATTCGTGTCTAATTGT+CGG | + | chr8_4:48527959-48527978 | Msa1329730:intron | 30.0% |
| ATCAAATTGAACAAAAGCTG+TGG | - | chr8_4:48528016-48528035 | None:intergenic | 30.0% | |
| !!! | TTTTACTGCATTGATTCTTG+TGG | + | chr8_4:48528081-48528100 | Msa1329730:intron | 30.0% |
| !!! | TGAGACTTAAGATGCTTTTT+TGG | - | chr8_4:48528154-48528173 | None:intergenic | 30.0% |
| ! | TATCTCAGTAATTTTAGACG+GGG | + | chr8_4:48528599-48528618 | Msa1329730:intron | 30.0% |
| ! | AGAAATTCAAAGGCGTATTT+AGG | - | chr8_4:48528736-48528755 | None:intergenic | 30.0% |
| !! | CGCATTTTTCAGAAATTCAA+AGG | - | chr8_4:48528746-48528765 | None:intergenic | 30.0% |
| CAATTTGCATTTCCAGTATA+AGG | + | chr8_4:48528914-48528933 | Msa1329730:intron | 30.0% | |
| TTCAAATTCTTTAGTGTGCA+TGG | + | chr8_4:48529056-48529075 | Msa1329730:intron | 30.0% | |
| !! | TAAATTTCCCAATGGACTAA+AGG | - | chr8_4:48529175-48529194 | None:intergenic | 30.0% |
| GATCATCATAAATTTCCCAA+TGG | - | chr8_4:48529183-48529202 | None:intergenic | 30.0% | |
| ATCAAAACGCATACTACAAA+AGG | - | chr8_4:48529217-48529236 | None:intergenic | 30.0% | |
| ! | TAAGAGGCAAGTAAATTTTG+AGG | - | chr8_4:48529362-48529381 | None:intergenic | 30.0% |
| AATATGTTAATGCTTGAGAG+CGG | + | chr8_4:48529415-48529434 | Msa1329730:CDS | 30.0% | |
| CTTTGACTGAAAATTTGACA+AGG | - | chr8_4:48529522-48529541 | None:intergenic | 30.0% | |
| ! | ATTTTCAGTCAAAGAAAAGC+TGG | + | chr8_4:48529528-48529547 | Msa1329730:intron | 30.0% |
| ! | TTTTCAGTCAAAGAAAAGCT+GGG | + | chr8_4:48529529-48529548 | Msa1329730:intron | 30.0% |
| TGATTAAAAAGATGCTCCAT+TGG | + | chr8_4:48529780-48529799 | Msa1329730:intron | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+AGG | + | chr8_4:48529982-48530001 | Msa1329730:intron | 30.0% | |
| CTAACTCATCCTTAAAAAAC+CGG | - | chr8_4:48530029-48530048 | None:intergenic | 30.0% | |
| ! | TAATAGCTTAACTTTTGGCA+TGG | + | chr8_4:48530087-48530106 | Msa1329730:intron | 30.0% |
| TGTATTTGTCCATTCTTCAA+GGG | + | chr8_4:48530289-48530308 | Msa1329730:intron | 30.0% | |
| ! | AATGTTTGAGGTTACTAAAG+CGG | + | chr8_4:48530626-48530645 | Msa1329730:intron | 30.0% |
| TATCATCTTCAAATGGATGT+TGG | - | chr8_4:48530672-48530691 | None:intergenic | 30.0% | |
| TCTTGTCTATCATCTTCAAA+TGG | - | chr8_4:48530679-48530698 | None:intergenic | 30.0% | |
| ATAGACAAGAAAATTTCCCA+AGG | + | chr8_4:48530689-48530708 | Msa1329730:intron | 30.0% | |
| ! | CTTGTATAAAGCGCTTTAAT+AGG | + | chr8_4:48530813-48530832 | Msa1329730:intron | 30.0% |
| TTCTTCGTTATAAGTTTCAC+TGG | + | chr8_4:48531018-48531037 | Msa1329730:intron | 30.0% | |
| TCAGAAATCAAAATGTAGGA+AGG | - | chr8_4:48531094-48531113 | None:intergenic | 30.0% | |
| GATCTCAGAAATCAAAATGT+AGG | - | chr8_4:48531098-48531117 | None:intergenic | 30.0% | |
| !! | TTGATTTCTGAGATCACTAT+TGG | + | chr8_4:48531103-48531122 | Msa1329730:intron | 30.0% |
| ! | AGCATGTAGATATGTTTTCA+AGG | + | chr8_4:48531277-48531296 | Msa1329730:intron | 30.0% |
| !! | TAGATATGTTTTCAAGGTTG+TGG | + | chr8_4:48531283-48531302 | Msa1329730:intron | 30.0% |
| CTATAATTCAATTGGGCAAA+AGG | - | chr8_4:48531315-48531334 | None:intergenic | 30.0% | |
| TTTGCCCAATTGAATTATAG+AGG | + | chr8_4:48531315-48531334 | Msa1329730:intron | 30.0% | |
| TTGCCCAATTGAATTATAGA+GGG | + | chr8_4:48531316-48531335 | Msa1329730:intron | 30.0% | |
| !!! | AATTATAGAGGGCCTTATTT+TGG | + | chr8_4:48531327-48531346 | Msa1329730:intron | 30.0% |
| AATAGGCAAACACCAAAATA+AGG | - | chr8_4:48531342-48531361 | None:intergenic | 30.0% | |
| TTATTCATCGTGTTCCAAAT+AGG | + | chr8_4:48531480-48531499 | Msa1329730:intron | 30.0% | |
| TCATAAGTACATGCTATAGT+TGG | + | chr8_4:48531525-48531544 | Msa1329730:intron | 30.0% | |
| !!! | TGGTTTTAGTTCATTGTCTT+TGG | + | chr8_4:48531545-48531564 | Msa1329730:intron | 30.0% |
| ! | ACCTTTTCAAATCCAGTTTA+AGG | + | chr8_4:48531576-48531595 | Msa1329730:intron | 30.0% |
| ! | TTGTTGCCAACAAATTTGTT+GGG | - | chr8_4:48531763-48531782 | None:intergenic | 30.0% |
| TTTGTTGCCAACAAATTTGT+TGG | - | chr8_4:48531764-48531783 | None:intergenic | 30.0% | |
| ! | CAACAATTTTCTTGAACGTA+AGG | - | chr8_4:48531805-48531824 | None:intergenic | 30.0% |
| CTTACGTTCAAGAAAATTGT+TGG | + | chr8_4:48531803-48531822 | Msa1329730:intron | 30.0% | |
| ! | ACTTGACTTTACGTTTTTGT+CGG | + | chr8_4:48532031-48532050 | Msa1329730:intron | 30.0% |
| !!! | ATATTAACTTGTTTTGGGAG+TGG | + | chr8_4:48532387-48532406 | Msa1329730:intron | 30.0% |
| !!! | TATTAACTTGTTTTGGGAGT+GGG | + | chr8_4:48532388-48532407 | Msa1329730:intron | 30.0% |
| ATAAACAATTTCTTGCAAGG+AGG | - | chr8_4:48532583-48532602 | None:intergenic | 30.0% | |
| !! | GTGTTTTGTTCATCATCTTT+TGG | + | chr8_4:48532612-48532631 | Msa1329730:intron | 30.0% |
| !! | GTTTTGTTCATCATCTTTTG+GGG | + | chr8_4:48532614-48532633 | Msa1329730:intron | 30.0% |
| TTTATCATACATCAGGTGAT+AGG | + | chr8_4:48532696-48532715 | Msa1329730:intron | 30.0% | |
| TATAATCTACAAACTGTGCA+TGG | + | chr8_4:48533074-48533093 | Msa1329730:intron | 30.0% | |
| GCATGTATTATGTTTCTTGT+TGG | + | chr8_4:48533237-48533256 | Msa1329730:intron | 30.0% | |
| AAAATTTACACCACATCCTT+CGG | - | chr8_4:48533337-48533356 | None:intergenic | 30.0% | |
| ! | TTAATGGTGGAAATAAGTTG+TGG | - | chr8_4:48533531-48533550 | None:intergenic | 30.0% |
| !!! | TGTTTTAAGAAAAGCACAAG+GGG | - | chr8_4:48533559-48533578 | None:intergenic | 30.0% |
| ! | CAGCTTTATAATTACAGAAC+AGG | - | chr8_4:48533778-48533797 | None:intergenic | 30.0% |
| ! | CTTTTGTTGAGTTTTCAGAT+TGG | + | chr8_4:48533850-48533869 | Msa1329730:intron | 30.0% |
| GTTAATGTCAATAGGGTTAT+GGG | - | chr8_4:48534016-48534035 | None:intergenic | 30.0% | |
| ! | TTTAACTTTATTTGACCTGG+TGG | + | chr8_4:48534136-48534155 | Msa1329730:intron | 30.0% |
| AGCAACAAAATCAAATGTTC+AGG | - | chr8_4:48534164-48534183 | None:intergenic | 30.0% | |
| !!! | TTATTTGTTTTGGTGTGAGT+AGG | + | chr8_4:48534188-48534207 | Msa1329730:intron | 30.0% |
| ATAAGCTTCACTTTAAGTCT+AGG | - | chr8_4:48534261-48534280 | None:intergenic | 30.0% | |
| ACATAAATTGAATCCCTTGA+AGG | + | chr8_4:48534308-48534327 | Msa1329730:CDS | 30.0% | |
| AAATTGTTCGTTACCTTCAA+GGG | - | chr8_4:48534324-48534343 | None:intergenic | 30.0% | |
| TAAATTGTTCGTTACCTTCA+AGG | - | chr8_4:48534325-48534344 | None:intergenic | 30.0% | |
| AACAATTTAGAAAGCTGTCA+TGG | + | chr8_4:48534336-48534355 | Msa1329730:intron | 30.0% | |
| AACAAAATGCTATCTCCATT+CGG | - | chr8_4:48534427-48534446 | None:intergenic | 30.0% | |
| ! | GCCTGATATAAATTTTTGAC+AGG | + | chr8_4:48534493-48534512 | Msa1329730:intron | 30.0% |
| !! | AGTAGAGGAATTTCTAAAAC+AGG | + | chr8_4:48534532-48534551 | Msa1329730:CDS | 30.0% |
| TCAACAAACATGGATCAAAT+GGG | - | chr8_4:48534667-48534686 | None:intergenic | 30.0% | |
| TTCAACAAACATGGATCAAA+TGG | - | chr8_4:48534668-48534687 | None:intergenic | 30.0% | |
| !! | TCACTTTTCTTCAACAAACA+TGG | - | chr8_4:48534677-48534696 | None:intergenic | 30.0% |
| ! | GTTTGTTGAAGAAAAGTGAA+AGG | + | chr8_4:48534678-48534697 | Msa1329730:CDS | 30.0% |
| ! | TGCATTTTCTGTCGTTATAA+CGG | + | chr8_4:48534767-48534786 | Msa1329730:intron | 30.0% |
| ! | TTTTGTTGACATGAATGCAA+AGG | + | chr8_4:48534946-48534965 | Msa1329730:CDS | 30.0% |
| ATGAATGATTATGATATGGC+CGG | + | chr8_4:48534971-48534990 | Msa1329730:CDS | 30.0% | |
| ATCTATGAAATATGGGTTTC+AGG | + | chr8_4:48535054-48535073 | Msa1329730:CDS | 30.0% | |
| ! | GTAGATAATCTGATTTTCGA+CGG | - | chr8_4:48535100-48535119 | None:intergenic | 30.0% |
| ACAATGGTGTCTTAGAAAAT+GGG | + | chr8_4:48535200-48535219 | Msa1329730:three_prime_UTR | 30.0% | |
| ! | TATTTTTCCTTTCACTGTTG+AGG | + | chr8_4:48535271-48535290 | Msa1329730:three_prime_UTR | 30.0% |
| ! | AGTGGGGAATAAATCTTTTA+TGG | - | chr8_4:48535318-48535337 | None:intergenic | 30.0% |
| AAGATAGAAATTCAAGTCCA+GGG | - | chr8_4:48535441-48535460 | None:intergenic | 30.0% | |
| TAAGATAGAAATTCAAGTCC+AGG | - | chr8_4:48535442-48535461 | None:intergenic | 30.0% | |
| AGGATTAAGATTCCTGAGTT+AGG | + | chr8_4:48527723-48527742 | Msa1329730:intron | 35.0% | |
| GGATTAAGATTCCTGAGTTA+GGG | + | chr8_4:48527724-48527743 | Msa1329730:intron | 35.0% | |
| CGAAGATTTATCTGTTATGG+AGG | + | chr8_4:48527785-48527804 | Msa1329730:CDS | 35.0% | |
| AGATTTATCTGTTATGGAGG+AGG | + | chr8_4:48527788-48527807 | Msa1329730:CDS | 35.0% | |
| GCATCATATTTCCTATCAGT+TGG | - | chr8_4:48528507-48528526 | None:intergenic | 35.0% | |
| ATATGATGCAGCTGATATCA+TGG | + | chr8_4:48528518-48528537 | Msa1329730:CDS | 35.0% | |
| ! | TTGATGTGTCTTTGTTTCAC+AGG | + | chr8_4:48528648-48528667 | Msa1329730:intron | 35.0% |
| !! | TGATTTTTGTTTGGAGTTGC+TGG | + | chr8_4:48528693-48528712 | Msa1329730:CDS | 35.0% |
| ! | AATTCAAAGGCGTATTTAGG+AGG | - | chr8_4:48528733-48528752 | None:intergenic | 35.0% |
| ! | GAATTTCTGAAAAATGCGGA+TGG | + | chr8_4:48528748-48528767 | Msa1329730:CDS | 35.0% |
| TGGAGTTGACATGAAGAATA+AGG | + | chr8_4:48528768-48528787 | Msa1329730:CDS | 35.0% | |
| ! | TCTGAAACACATAGCTGATT+TGG | + | chr8_4:48528813-48528832 | Msa1329730:CDS | 35.0% |
| ! | ACTATTGGTGATAATCGCAA+GGG | - | chr8_4:48528850-48528869 | None:intergenic | 35.0% |
| ! | AACTATTGGTGATAATCGCA+AGG | - | chr8_4:48528851-48528870 | None:intergenic | 35.0% |
| GAAATGCAAATTGAACTCAC+AGG | - | chr8_4:48528907-48528926 | None:intergenic | 35.0% | |
| CAAATGCTAGAGTTCAAGAT+TGG | - | chr8_4:48529017-48529036 | None:intergenic | 35.0% | |
| TTTACTTCTGCAGCATAAAC+TGG | + | chr8_4:48529113-48529132 | Msa1329730:intron | 35.0% | |
| AATCTTCTCCTTTAGTCCAT+TGG | + | chr8_4:48529164-48529183 | Msa1329730:intron | 35.0% | |
| ATCTTCTCCTTTAGTCCATT+GGG | + | chr8_4:48529165-48529184 | Msa1329730:intron | 35.0% | |
| ACATACATGACAATCTCCTA+CGG | - | chr8_4:48529391-48529410 | None:intergenic | 35.0% | |
| GGTGAAATTGGAGAAATTGT+TGG | + | chr8_4:48529436-48529455 | Msa1329730:CDS | 35.0% | |
| GAAATTGGAGAAATTGTTGG+TGG | + | chr8_4:48529439-48529458 | Msa1329730:CDS | 35.0% | |
| ATTCTATTTGTCCTGGTTGT+AGG | + | chr8_4:48529571-48529590 | Msa1329730:intron | 35.0% | |
| AAAAAGATGCTCCATTGGAT+TGG | + | chr8_4:48529785-48529804 | Msa1329730:intron | 35.0% | |
| TGGAAATTCCGTCTTTATTG+CGG | + | chr8_4:48529843-48529862 | Msa1329730:intron | 35.0% | |
| !!! | CTTCATTTTGTTGGCTTTGA+GGG | + | chr8_4:48529925-48529944 | Msa1329730:intron | 35.0% |
| !!! | TTCATTTTGTTGGCTTTGAG+GGG | + | chr8_4:48529926-48529945 | Msa1329730:intron | 35.0% |
| GAGAAGAGTTTATAAAGAGG+AGG | + | chr8_4:48529985-48530004 | Msa1329730:intron | 35.0% | |
| AAGAGTTTATAAAGAGGAGG+CGG | + | chr8_4:48529988-48530007 | Msa1329730:intron | 35.0% | |
| !!! | CGGTTTTTTAAGGATGAGTT+AGG | + | chr8_4:48530027-48530046 | Msa1329730:intron | 35.0% |
| GTGTATTTGTCCATTCTTCA+AGG | + | chr8_4:48530288-48530307 | Msa1329730:intron | 35.0% | |
| TATATCTCTAACTAAACCCC+TGG | - | chr8_4:48530323-48530342 | None:intergenic | 35.0% | |
| ! | GAAAAGTATATTCCTGTGCT+TGG | + | chr8_4:48530486-48530505 | Msa1329730:intron | 35.0% |
| ATATATATGAAGCCAAGCAC+AGG | - | chr8_4:48530501-48530520 | None:intergenic | 35.0% | |
| ACTTCACAACACACAGAATA+TGG | - | chr8_4:48530551-48530570 | None:intergenic | 35.0% | |
| TTTATGAAACAATGCACCAG+AGG | - | chr8_4:48530593-48530612 | None:intergenic | 35.0% | |
| AATGGATGTTGGAAGTTTAC+AGG | - | chr8_4:48530661-48530680 | None:intergenic | 35.0% | |
| TTTCCCAAGGATGAAATTGT+TGG | + | chr8_4:48530702-48530721 | Msa1329730:intron | 35.0% | |
| TTCCCAAGGATGAAATTGTT+GGG | + | chr8_4:48530703-48530722 | Msa1329730:intron | 35.0% | |
| AACCCAACAATTTCATCCTT+GGG | - | chr8_4:48530708-48530727 | None:intergenic | 35.0% | |
| TGTGGAAATTCAACCAAAGA+AGG | + | chr8_4:48530727-48530746 | Msa1329730:intron | 35.0% | |
| ATTGTTGATGTCCCTTTCTT+TGG | - | chr8_4:48530776-48530795 | None:intergenic | 35.0% | |
| TTTCACTGGTATATGGTTGT+AGG | + | chr8_4:48531032-48531051 | Msa1329730:intron | 35.0% | |
| CTTGGTTGAAATACAAGTCT+TGG | + | chr8_4:48531211-48531230 | Msa1329730:intron | 35.0% | |
| !! | AACCATACAGTTTGCTGTAT+TGG | + | chr8_4:48531237-48531256 | Msa1329730:intron | 35.0% |
| TACCAATACAGCAAACTGTA+TGG | - | chr8_4:48531242-48531261 | None:intergenic | 35.0% | |
| AGGCCCTCTATAATTCAATT+GGG | - | chr8_4:48531322-48531341 | None:intergenic | 35.0% | |
| AAGGCCCTCTATAATTCAAT+TGG | - | chr8_4:48531323-48531342 | None:intergenic | 35.0% | |
| !!! | TTTTGGTGTTTGCCTATTTC+AGG | + | chr8_4:48531344-48531363 | Msa1329730:intron | 35.0% |
| TGGATTTGAAAAGGTCAGAA+TGG | - | chr8_4:48531571-48531590 | None:intergenic | 35.0% | |
| GCCTTAAACTGGATTTGAAA+AGG | - | chr8_4:48531580-48531599 | None:intergenic | 35.0% | |
| ! | AAAGCGTTCTATTATCTCCA+GGG | + | chr8_4:48531602-48531621 | Msa1329730:intron | 35.0% |
| !! | ACAAATTTGTTGGGCACATA+AGG | - | chr8_4:48531754-48531773 | None:intergenic | 35.0% |
| TATGTGCCCAACAAATTTGT+TGG | + | chr8_4:48531754-48531773 | Msa1329730:intron | 35.0% | |
| !!! | ATTAACTTGTTTTGGGAGTG+GGG | + | chr8_4:48532389-48532408 | Msa1329730:intron | 35.0% |
| !!! | TCTTTTACAAAAGGAGCACT+TGG | + | chr8_4:48532442-48532461 | Msa1329730:intron | 35.0% |
| TCGAGTAGTATGATCCTAAA+AGG | + | chr8_4:48532554-48532573 | Msa1329730:intron | 35.0% | |
| CGAGTAGTATGATCCTAAAA+GGG | + | chr8_4:48532555-48532574 | Msa1329730:intron | 35.0% | |
| CACACAATGATCAGCTATAT+TGG | - | chr8_4:48532825-48532844 | None:intergenic | 35.0% | |
| GTACCACAGAGTTGTTAAAT+AGG | + | chr8_4:48532896-48532915 | Msa1329730:CDS | 35.0% | |
| GTTCCTATTTAACAACTCTG+TGG | - | chr8_4:48532902-48532921 | None:intergenic | 35.0% | |
| GCAAAAAAGTCAGCACAATT+AGG | - | chr8_4:48532963-48532982 | None:intergenic | 35.0% | |
| ATACAAGTCAAAATTTGCCC+AGG | + | chr8_4:48533181-48533200 | Msa1329730:CDS | 35.0% | |
| !! | AAGCCAAATAAAGAGTACCT+GGG | - | chr8_4:48533201-48533220 | None:intergenic | 35.0% |
| ! | ATGTGGTGTAAATTTTGCCA+TGG | + | chr8_4:48533341-48533360 | Msa1329730:CDS | 35.0% |
| ATGAATCAAACATCTCTGTG+AGG | - | chr8_4:48533368-48533387 | None:intergenic | 35.0% | |
| GTGTTAATCCTCCTATTACT+AGG | + | chr8_4:48533388-48533407 | Msa1329730:CDS | 35.0% | |
| AAATGCATTAAGCAAGGACA+AGG | - | chr8_4:48533428-48533447 | None:intergenic | 35.0% | |
| GCTAGTAAATGCATTAAGCA+AGG | - | chr8_4:48533434-48533453 | None:intergenic | 35.0% | |
| GGATTAAAAACCACTTATGC+TGG | - | chr8_4:48533465-48533484 | None:intergenic | 35.0% | |
| !! | TTTTAAGAAAAGCACAAGGG+GGG | - | chr8_4:48533557-48533576 | None:intergenic | 35.0% |
| !!! | GTTTTAAGAAAAGCACAAGG+GGG | - | chr8_4:48533558-48533577 | None:intergenic | 35.0% |
| GAAGTTTCTTTCATCTGAGT+TGG | + | chr8_4:48533716-48533735 | Msa1329730:CDS | 35.0% | |
| TGGTTGCTAACATCATACAA+AGG | + | chr8_4:48533736-48533755 | Msa1329730:CDS | 35.0% | |
| GCTAACATCATACAAAGGTT+TGG | + | chr8_4:48533741-48533760 | Msa1329730:intron | 35.0% | |
| ! | GAGTTTTCAGATTGGTAGAT+TGG | + | chr8_4:48533858-48533877 | Msa1329730:intron | 35.0% |
| !! | AAAAAACTTGGTGTGCTTGT+GGG | - | chr8_4:48533922-48533941 | None:intergenic | 35.0% |
| !! | TAAAAAACTTGGTGTGCTTG+TGG | - | chr8_4:48533923-48533942 | None:intergenic | 35.0% |
| GGCAAGCAGAATAAAAAACT+TGG | - | chr8_4:48533934-48533953 | None:intergenic | 35.0% | |
| !!! | AGTTTTTTATTCTGCTTGCC+AGG | + | chr8_4:48533934-48533953 | Msa1329730:CDS | 35.0% |
| TTGACCGCTTTAGCATATAA+TGG | + | chr8_4:48533972-48533991 | Msa1329730:intron | 35.0% | |
| CGTTAATGTCAATAGGGTTA+TGG | - | chr8_4:48534017-48534036 | None:intergenic | 35.0% | |
| TAAACAGAATGTTCGACTGT+AGG | + | chr8_4:48534368-48534387 | Msa1329730:intron | 35.0% | |
| AATGTTCGACTGTAGGATTA+TGG | + | chr8_4:48534375-48534394 | Msa1329730:intron | 35.0% | |
| !! | GGAATTTCTAAAACAGGCAA+AGG | + | chr8_4:48534538-48534557 | Msa1329730:CDS | 35.0% |
| ATATGATACATATGCCAACG+AGG | + | chr8_4:48534886-48534905 | Msa1329730:CDS | 35.0% | |
| TGAATGATTATGATATGGCC+GGG | + | chr8_4:48534972-48534991 | Msa1329730:CDS | 35.0% | |
| ! | ATGGACATTTTGTTCAAGTC+AGG | - | chr8_4:48535025-48535044 | None:intergenic | 35.0% |
| ACGCCCAAATCTATGAAATA+TGG | + | chr8_4:48535046-48535065 | Msa1329730:CDS | 35.0% | |
| CGCCCAAATCTATGAAATAT+GGG | + | chr8_4:48535047-48535066 | Msa1329730:CDS | 35.0% | |
| CACAATGGTGTCTTAGAAAA+TGG | + | chr8_4:48535199-48535218 | Msa1329730:three_prime_UTR | 35.0% | |
| CAGCTATTGTAGCATTTGTT+TGG | + | chr8_4:48535477-48535496 | Msa1329730:three_prime_UTR | 35.0% | |
| TGCTTAGATGCAACTGATAT+TGG | + | chr8_4:48535522-48535541 | Msa1329730:three_prime_UTR | 35.0% | |
| ! | TCCTGACTCTCACCAATTTT+AGG | + | chr8_4:48527600-48527619 | Msa1329730:five_prime_UTR | 40.0% |
| ! | CCTGACTCTCACCAATTTTA+GGG | + | chr8_4:48527601-48527620 | Msa1329730:five_prime_UTR | 40.0% |
| TATGCGAAGGATGGTAGAAT+TGG | - | chr8_4:48527641-48527660 | None:intergenic | 40.0% | |
| ATTCCTGAGTTAGGGTTCTA+AGG | + | chr8_4:48527732-48527751 | Msa1329730:five_prime_UTR | 40.0% | |
| ! | TTCCTGAGTTAGGGTTCTAA+GGG | + | chr8_4:48527733-48527752 | Msa1329730:five_prime_UTR | 40.0% |
| !! | TTAGGGTTCTAAGGGAGTAT+GGG | + | chr8_4:48527741-48527760 | Msa1329730:exon | 40.0% |
| AATCACATGTGTCAGTGTTG+TGG | - | chr8_4:48527905-48527924 | None:intergenic | 40.0% | |
| ! | TGTCTAATTGTCGGTGTCTA+TGG | + | chr8_4:48527968-48527987 | Msa1329730:intron | 40.0% |
| !! | TGCATTGATTCTTGTGGTTC+AGG | + | chr8_4:48528087-48528106 | Msa1329730:intron | 40.0% |
| TTGATTCTTGTGGTTCAGGA+TGG | + | chr8_4:48528091-48528110 | Msa1329730:intron | 40.0% | |
| TCAGCACTGTGAATTTCCAT+AGG | - | chr8_4:48528254-48528273 | None:intergenic | 40.0% | |
| AAGAAAGAAGCGATTCATGC+TGG | - | chr8_4:48528358-48528377 | None:intergenic | 40.0% | |
| !! | TCCGTAAGTTTGCTTTTCAG+TGG | + | chr8_4:48528377-48528396 | Msa1329730:intron | 40.0% |
| CCCACTGAAAAGCAAACTTA+CGG | - | chr8_4:48528381-48528400 | None:intergenic | 40.0% | |
| !! | CCGTAAGTTTGCTTTTCAGT+GGG | + | chr8_4:48528378-48528397 | Msa1329730:intron | 40.0% |
| TGAAGAATAAGGTTCTGCCT+CGG | + | chr8_4:48528779-48528798 | Msa1329730:CDS | 40.0% | |
| TATGCCAAAACGTTTCGCTA+AGG | + | chr8_4:48528879-48528898 | Msa1329730:CDS | 40.0% | |
| CATACATGACAATCTCCTAC+GGG | - | chr8_4:48529390-48529409 | None:intergenic | 40.0% | |
| !! | CGTGGATAAGTTGATAGAGT+TGG | + | chr8_4:48529480-48529499 | Msa1329730:CDS | 40.0% |
| GTTGTAGGTGGAAATTGGAT+GGG | + | chr8_4:48529586-48529605 | Msa1329730:intron | 40.0% | |
| TGCCAAGTGCATATTTGCAA+TGG | + | chr8_4:48529628-48529647 | Msa1329730:CDS | 40.0% | |
| CTCCATTGCAAATATGCACT+TGG | - | chr8_4:48529633-48529652 | None:intergenic | 40.0% | |
| GAACTCTATCACCAATCCAA+TGG | - | chr8_4:48529799-48529818 | None:intergenic | 40.0% | |
| !! | CAACAAAATGAAGGTGTTGG+AGG | - | chr8_4:48529918-48529937 | None:intergenic | 40.0% |
| ! | CTCCAACACCTTCATTTTGT+TGG | + | chr8_4:48529916-48529935 | Msa1329730:intron | 40.0% |
| ! | AGCCAACAAAATGAAGGTGT+TGG | - | chr8_4:48529921-48529940 | None:intergenic | 40.0% |
| CCTCAAAGCCAACAAAATGA+AGG | - | chr8_4:48529927-48529946 | None:intergenic | 40.0% | |
| !!! | CCTTCATTTTGTTGGCTTTG+AGG | + | chr8_4:48529924-48529943 | Msa1329730:intron | 40.0% |
| !!! | TCATTTTGTTGGCTTTGAGG+GGG | + | chr8_4:48529927-48529946 | Msa1329730:intron | 40.0% |
| !! | CCTTAAAAAACCGGCTTGTA+AGG | - | chr8_4:48530020-48530039 | None:intergenic | 40.0% |
| !!! | CCTTACAAGCCGGTTTTTTA+AGG | + | chr8_4:48530017-48530036 | Msa1329730:intron | 40.0% |
| !! | GGCATAGTTTGTTCACGAAA+TGG | + | chr8_4:48530222-48530241 | Msa1329730:intron | 40.0% |
| AGATTCAAACTCTGCATCAC+TGG | - | chr8_4:48530264-48530283 | None:intergenic | 40.0% | |
| GAACAACATCCCTTGAAGAA+TGG | - | chr8_4:48530301-48530320 | None:intergenic | 40.0% | |
| TTGGAAGTTTACAGGACGAT+AGG | - | chr8_4:48530653-48530672 | None:intergenic | 40.0% | |
| CAACCCAACAATTTCATCCT+TGG | - | chr8_4:48530709-48530728 | None:intergenic | 40.0% | |
| ! | AGGATGAAATTGTTGGGTTG+TGG | + | chr8_4:48530709-48530728 | Msa1329730:intron | 40.0% |
| ACTCTCAAGTTCACCTTCTT+TGG | - | chr8_4:48530743-48530762 | None:intergenic | 40.0% | |
| AAAGAAGGTGAACTTGAGAG+TGG | + | chr8_4:48530742-48530761 | Msa1329730:intron | 40.0% | |
| AAGAAGGTGAACTTGAGAGT+GGG | + | chr8_4:48530743-48530762 | Msa1329730:intron | 40.0% | |
| TGGGAAACTGACCAAAGAAA+GGG | + | chr8_4:48530762-48530781 | Msa1329730:intron | 40.0% | |
| GTAGCACAGAGAATGATCAT+TGG | + | chr8_4:48531058-48531077 | Msa1329730:intron | 40.0% | |
| ! | AAAAGGTGTGATCCAGTAAC+AGG | - | chr8_4:48531129-48531148 | None:intergenic | 40.0% |
| AATCTGATGGAACGATAGCT+TGG | + | chr8_4:48531193-48531212 | Msa1329730:intron | 40.0% | |
| ! | TAGGGTTGTTAGCCTGAAAT+AGG | - | chr8_4:48531359-48531378 | None:intergenic | 40.0% |
| AAACTTCATCAGTTAAGCCC+AGG | + | chr8_4:48531446-48531465 | Msa1329730:intron | 40.0% | |
| GCACACACTCAATTCCTATT+TGG | - | chr8_4:48531497-48531516 | None:intergenic | 40.0% | |
| ! | CAAAGCGTTCTATTATCTCC+AGG | + | chr8_4:48531601-48531620 | Msa1329730:intron | 40.0% |
| CTGGCATTTGTATGTTGATG+TGG | + | chr8_4:48531703-48531722 | Msa1329730:intron | 40.0% | |
| ! | ATTTAGAACACTGCGACTTG+TGG | + | chr8_4:48532100-48532119 | Msa1329730:intron | 40.0% |
| !!! | AGAACGGTTGGTTTTTGAAG+TGG | + | chr8_4:48532295-48532314 | Msa1329730:intron | 40.0% |
| !!! | TTAACTTGTTTTGGGAGTGG+GGG | + | chr8_4:48532390-48532409 | Msa1329730:intron | 40.0% |
| AAAAGCTCGAGCTAACACTA+TGG | - | chr8_4:48532505-48532524 | None:intergenic | 40.0% | |
| TCATACTACTCGAGCATACA+GGG | - | chr8_4:48532547-48532566 | None:intergenic | 40.0% | |
| ATCATACTACTCGAGCATAC+AGG | - | chr8_4:48532548-48532567 | None:intergenic | 40.0% | |
| CTCTGTGGTACACTGAAAAA+TGG | - | chr8_4:48532887-48532906 | None:intergenic | 40.0% | |
| GAACAATTTGCAAGGCAATC+AGG | + | chr8_4:48532918-48532937 | Msa1329730:CDS | 40.0% | |
| TCTTGAATGCTGTCAAAGCA+AGG | + | chr8_4:48532984-48533003 | Msa1329730:CDS | 40.0% | |
| CTTGAATGCTGTCAAAGCAA+GGG | + | chr8_4:48532985-48533004 | Msa1329730:CDS | 40.0% | |
| TTGCCCAGGTACTCTTTATT+TGG | + | chr8_4:48533195-48533214 | Msa1329730:intron | 40.0% | |
| !! | GAAGCCAAATAAAGAGTACC+TGG | - | chr8_4:48533202-48533221 | None:intergenic | 40.0% |
| TACATGCAAGTTAGGAACAG+TGG | - | chr8_4:48533224-48533243 | None:intergenic | 40.0% | |
| AAGCGGCATTACCTAGTAAT+AGG | - | chr8_4:48533402-48533421 | None:intergenic | 40.0% | |
| CACATCATTCATACAACAGG+AGG | - | chr8_4:48533486-48533505 | None:intergenic | 40.0% | |
| CTCCTGTTGTATGAATGATG+TGG | + | chr8_4:48533484-48533503 | Msa1329730:intron | 40.0% | |
| AGCCACATCATTCATACAAC+AGG | - | chr8_4:48533489-48533508 | None:intergenic | 40.0% | |
| ! | TTTAAGAAAAGCACAAGGGG+GGG | - | chr8_4:48533556-48533575 | None:intergenic | 40.0% |
| ACCGCTTTAGCATATAATGG+TGG | + | chr8_4:48533975-48533994 | Msa1329730:intron | 40.0% | |
| CCCACCATTATATGCTAAAG+CGG | - | chr8_4:48533979-48533998 | None:intergenic | 40.0% | |
| CCGCTTTAGCATATAATGGT+GGG | + | chr8_4:48533976-48533995 | Msa1329730:intron | 40.0% | |
| ! | TAGCATATAATGGTGGGAGA+AGG | + | chr8_4:48533982-48534001 | Msa1329730:intron | 40.0% |
| ! | AGCATATAATGGTGGGAGAA+GGG | + | chr8_4:48533983-48534002 | Msa1329730:intron | 40.0% |
| AATGTCAATAGGGTTATGGG+TGG | - | chr8_4:48534013-48534032 | None:intergenic | 40.0% | |
| ! | CAAAATAAAACGAGGGTGCA+GGG | - | chr8_4:48534071-48534090 | None:intergenic | 40.0% |
| ! | ACAAAATAAAACGAGGGTGC+AGG | - | chr8_4:48534072-48534091 | None:intergenic | 40.0% |
| CTTTCGCATGAGATCATTGA+TGG | + | chr8_4:48534230-48534249 | Msa1329730:CDS | 40.0% | |
| GAAGCTTATCAAAATGCCCA+TGG | + | chr8_4:48534272-48534291 | Msa1329730:CDS | 40.0% | |
| ! | TGTTTCCAGATTAGCTCCAT+GGG | - | chr8_4:48534291-48534310 | None:intergenic | 40.0% |
| ! | ATGTTTCCAGATTAGCTCCA+TGG | - | chr8_4:48534292-48534311 | None:intergenic | 40.0% |
| CTTACAACGTGAAGCTTGTA+TGG | + | chr8_4:48534456-48534475 | Msa1329730:intron | 40.0% | |
| AGAAATTCCTCTACTACGCT+AGG | - | chr8_4:48534527-48534546 | None:intergenic | 40.0% | |
| !!! | CATTTTCGATGATTTGCTCG+AGG | + | chr8_4:48534592-48534611 | Msa1329730:CDS | 40.0% |
| !! | TGAAAGGTGTGTAGCTTTTC+TGG | + | chr8_4:48534694-48534713 | Msa1329730:intron | 40.0% |
| !! | GAAAGGTGTGTAGCTTTTCT+GGG | + | chr8_4:48534695-48534714 | Msa1329730:intron | 40.0% |
| ! | AAAATGTGGCCTTAAGTAGC+TGG | - | chr8_4:48534840-48534859 | None:intergenic | 40.0% |
| !!! | TAGTTTTGACTCTTGACCAG+CGG | - | chr8_4:48534865-48534884 | None:intergenic | 40.0% |
| TTTCATAGATTTGGGCGTGA+TGG | - | chr8_4:48535044-48535063 | None:intergenic | 40.0% | |
| GCAGCTACTTATCAACACAA+TGG | + | chr8_4:48535184-48535203 | Msa1329730:three_prime_UTR | 40.0% | |
| TAGAAAATGGGCACTCCTAT+TGG | + | chr8_4:48535212-48535231 | Msa1329730:three_prime_UTR | 40.0% | |
| AGAAAATGGGCACTCCTATT+GGG | + | chr8_4:48535213-48535232 | Msa1329730:three_prime_UTR | 40.0% | |
| AAAACTACAACTGCCCCAAT+AGG | - | chr8_4:48535230-48535249 | None:intergenic | 40.0% | |
| TCAGTTACCTCAACAGTGAA+AGG | - | chr8_4:48535281-48535300 | None:intergenic | 40.0% | |
| ACTGTTGAGGTAACTGAACA+TGG | + | chr8_4:48535284-48535303 | Msa1329730:three_prime_UTR | 40.0% | |
| ! | TAGCATTTGTTTGGAGCTAG+AGG | + | chr8_4:48535486-48535505 | Msa1329730:three_prime_UTR | 40.0% |
| ! | AGCATTTGTTTGGAGCTAGA+GGG | + | chr8_4:48535487-48535506 | Msa1329730:three_prime_UTR | 40.0% |
| TCTCATAAACGAGCGTTAGG+AGG | - | chr8_4:48527498-48527517 | None:intergenic | 45.0% | |
| CTGTCTCATAAACGAGCGTT+AGG | - | chr8_4:48527501-48527520 | None:intergenic | 45.0% | |
| CGAGCTCGTAAGTCAACTTA+GGG | + | chr8_4:48527555-48527574 | Msa1329730:five_prime_UTR | 45.0% | |
| GAGCTCGTAAGTCAACTTAG+GGG | + | chr8_4:48527556-48527575 | Msa1329730:five_prime_UTR | 45.0% | |
| AGCTCGTAAGTCAACTTAGG+GGG | + | chr8_4:48527557-48527576 | Msa1329730:five_prime_UTR | 45.0% | |
| CCCTAAAATTGGTGAGAGTC+AGG | - | chr8_4:48527604-48527623 | None:intergenic | 45.0% | |
| !! | GTTAGGGTTCTAAGGGAGTA+TGG | + | chr8_4:48527740-48527759 | Msa1329730:exon | 45.0% |
| AGATACCCTTCTTGCAGTCT+CGG | + | chr8_4:48527851-48527870 | Msa1329730:CDS | 45.0% | |
| ATGTCATGTCCGATTGTCGA+TGG | - | chr8_4:48527881-48527900 | None:intergenic | 45.0% | |
| ATTCTTGTGGTTCAGGATGG+TGG | + | chr8_4:48528094-48528113 | Msa1329730:intron | 45.0% | |
| ! | TCACGACGCTGCTAAACTTT+TGG | + | chr8_4:48528171-48528190 | Msa1329730:CDS | 45.0% |
| ! | GACGCTGCTAAACTTTTGGT+GGG | + | chr8_4:48528175-48528194 | Msa1329730:intron | 45.0% |
| ATGCTGGATAGGGTCAATGT+AGG | - | chr8_4:48528342-48528361 | None:intergenic | 45.0% | |
| GAAGCGATTCATGCTGGATA+GGG | - | chr8_4:48528352-48528371 | None:intergenic | 45.0% | |
| AGAAGCGATTCATGCTGGAT+AGG | - | chr8_4:48528353-48528372 | None:intergenic | 45.0% | |
| AGCTTTCGAGATTGAGCTTG+TGG | + | chr8_4:48528472-48528491 | Msa1329730:intron | 45.0% | |
| GCTTTCGAGATTGAGCTTGT+GGG | + | chr8_4:48528473-48528492 | Msa1329730:intron | 45.0% | |
| GGGATTATGCTCCAACTGAT+AGG | + | chr8_4:48528493-48528512 | Msa1329730:CDS | 45.0% | |
| TGTTTCACAGGCTGCTTCAA+AGG | + | chr8_4:48528660-48528679 | Msa1329730:intron | 45.0% | |
| GTTTCACAGGCTGCTTCAAA+GGG | + | chr8_4:48528661-48528680 | Msa1329730:intron | 45.0% | |
| GAAGAATAAGGTTCTGCCTC+GGG | + | chr8_4:48528780-48528799 | Msa1329730:CDS | 45.0% | |
| TGATAATCGCAAGGGAGCAA+GGG | - | chr8_4:48528842-48528861 | None:intergenic | 45.0% | |
| GGCATACTGTGGACAACTAT+TGG | - | chr8_4:48528865-48528884 | None:intergenic | 45.0% | |
| !! | CGAAACGTTTTGGCATACTG+TGG | - | chr8_4:48528876-48528895 | None:intergenic | 45.0% |
| AGTTGCATCAGCCCTTATAC+TGG | - | chr8_4:48528929-48528948 | None:intergenic | 45.0% | |
| ATGCTTGAGAGCGGTGAAAT+TGG | + | chr8_4:48529424-48529443 | Msa1329730:CDS | 45.0% | |
| ATCAACTTATCCACGAGTGC+AGG | - | chr8_4:48529475-48529494 | None:intergenic | 45.0% | |
| CTATTTGTCCTGGTTGTAGG+TGG | + | chr8_4:48529574-48529593 | Msa1329730:intron | 45.0% | |
| TCCTGGTTGTAGGTGGAAAT+TGG | + | chr8_4:48529581-48529600 | Msa1329730:intron | 45.0% | |
| TCCAATTTCCACCTACAACC+AGG | - | chr8_4:48529585-48529604 | None:intergenic | 45.0% | |
| GGTTGTAGGTGGAAATTGGA+TGG | + | chr8_4:48529585-48529604 | Msa1329730:intron | 45.0% | |
| TAGGTGGAAATTGGATGGGA+TGG | + | chr8_4:48529590-48529609 | Msa1329730:intron | 45.0% | |
| !! | ACACTTCATCGACTCATCGT+AGG | - | chr8_4:48529752-48529771 | None:intergenic | 45.0% |
| CAAACCAAAGGCCGCAATTT+AGG | - | chr8_4:48529883-48529902 | None:intergenic | 45.0% | |
| CTGCAATGAAGGCAAACCAA+AGG | - | chr8_4:48529895-48529914 | None:intergenic | 45.0% | |
| TAGTCCCACATCGGATAGAT+AGG | + | chr8_4:48529956-48529975 | Msa1329730:intron | 45.0% | |
| GAGTCCTATCTATCCGATGT+GGG | - | chr8_4:48529963-48529982 | None:intergenic | 45.0% | |
| AGAGTCCTATCTATCCGATG+TGG | - | chr8_4:48529964-48529983 | None:intergenic | 45.0% | |
| !! | AAAAACCGGCTTGTAAGGTG+AGG | - | chr8_4:48530015-48530034 | None:intergenic | 45.0% |
| !! | GGCATGGTTTGTTCACGAAA+TGG | + | chr8_4:48530103-48530122 | Msa1329730:intron | 45.0% |
| TCTTCAAGGGATGTTGTTCC+AGG | + | chr8_4:48530302-48530321 | Msa1329730:intron | 45.0% | |
| CTTCAAGGGATGTTGTTCCA+GGG | + | chr8_4:48530303-48530322 | Msa1329730:intron | 45.0% | |
| TTCAAGGGATGTTGTTCCAG+GGG | + | chr8_4:48530304-48530323 | Msa1329730:intron | 45.0% | |
| ! | CATCTGATCTGAGATTTGCG+TGG | + | chr8_4:48530416-48530435 | Msa1329730:intron | 45.0% |
| ! | TGATCTGAGATTTGCGTGGA+CGG | + | chr8_4:48530420-48530439 | Msa1329730:intron | 45.0% |
| TTTGATGTGTGTTCCTCCTC+TGG | + | chr8_4:48530574-48530593 | Msa1329730:intron | 45.0% | |
| ATGAAACAATGCACCAGAGG+AGG | - | chr8_4:48530590-48530609 | None:intergenic | 45.0% | |
| GTGGGAAACTGACCAAAGAA+AGG | + | chr8_4:48530761-48530780 | Msa1329730:intron | 45.0% | |
| AAGCAGATGCCATTCCCTAT+TGG | + | chr8_4:48530906-48530925 | Msa1329730:intron | 45.0% | |
| !! | GCAGATGGATTGTGAAACTG+TGG | + | chr8_4:48530937-48530956 | Msa1329730:intron | 45.0% |
| ! | GATCACTATTGGCCTGTTAC+TGG | + | chr8_4:48531114-48531133 | Msa1329730:intron | 45.0% |
| AAGCCGTTCAACATGAACCA+CGG | - | chr8_4:48531414-48531433 | None:intergenic | 45.0% | |
| ! | TGTTGAACGGCTTTGTGAAG+TGG | + | chr8_4:48531421-48531440 | Msa1329730:intron | 45.0% |
| GAACGCTTTGTGCCTTAAAC+TGG | - | chr8_4:48531591-48531610 | None:intergenic | 45.0% | |
| TGCTCGGAAAATTAACTCCC+TGG | - | chr8_4:48531622-48531641 | None:intergenic | 45.0% | |
| CCAGCATGACCCTACATTTA+GGG | - | chr8_4:48531687-48531706 | None:intergenic | 45.0% | |
| !! | TTTGTCGGCTCTTCTCTCAA+TGG | + | chr8_4:48532046-48532065 | Msa1329730:intron | 45.0% |
| !!! | CGGTTGGTTTTTGAAGTGGA+TGG | + | chr8_4:48532299-48532318 | Msa1329730:intron | 45.0% |
| ! | TTGCAAGGAGGTTCCCTTTT+AGG | - | chr8_4:48532571-48532590 | None:intergenic | 45.0% |
| TTGGGAATACCTCAGCCAAT+CGG | - | chr8_4:48533011-48533030 | None:intergenic | 45.0% | |
| GATGTTCTATGCATGCGCAT+TGG | + | chr8_4:48533308-48533327 | Msa1329730:CDS | 45.0% | |
| AAACATCTCTGTGAGGACCA+TGG | - | chr8_4:48533361-48533380 | None:intergenic | 45.0% | |
| CGGCATTACCTAGTAATAGG+AGG | - | chr8_4:48533399-48533418 | None:intergenic | 45.0% | |
| AAGCAAGGACAAGGTGAAAG+CGG | - | chr8_4:48533419-48533438 | None:intergenic | 45.0% | |
| GCATGATAGACCAGCATAAG+TGG | + | chr8_4:48533452-48533471 | Msa1329730:intron | 45.0% | |
| CTAAAGCGGTCAAAAGTCGA+TGG | - | chr8_4:48533965-48533984 | None:intergenic | 45.0% | |
| ! | GCATATAATGGTGGGAGAAG+GGG | + | chr8_4:48533984-48534003 | Msa1329730:intron | 45.0% |
| TCAAATGTTCAGGATCCACC+AGG | - | chr8_4:48534154-48534173 | None:intergenic | 45.0% | |
| TCGCATGAGATCATTGATGG+AGG | + | chr8_4:48534233-48534252 | Msa1329730:CDS | 45.0% | |
| AAATGCCCATGGAGCTAATC+TGG | + | chr8_4:48534283-48534302 | Msa1329730:CDS | 45.0% | |
| ATCTCCATTCGGCAAGATCA+CGG | - | chr8_4:48534416-48534435 | None:intergenic | 45.0% | |
| ATGTTTGCCTAGCGTAGTAG+AGG | + | chr8_4:48534517-48534536 | Msa1329730:CDS | 45.0% | |
| TAAAACAGGCAAAGGCTGCT+CGG | + | chr8_4:48534546-48534565 | Msa1329730:CDS | 45.0% | |
| !! | TTTCGATGATTTGCTCGAGG+CGG | + | chr8_4:48534595-48534614 | Msa1329730:CDS | 45.0% |
| ATCTTTCCAAGGCTTTCGGT+GGG | + | chr8_4:48534618-48534637 | Msa1329730:CDS | 45.0% | |
| ATTTATCCCACCGAAAGCCT+TGG | - | chr8_4:48534627-48534646 | None:intergenic | 45.0% | |
| TGACCATCTCCAGCTACTTA+AGG | + | chr8_4:48534828-48534847 | Msa1329730:intron | 45.0% | |
| ATATGGGTTTCAGGCACAGA+TGG | + | chr8_4:48535063-48535082 | Msa1329730:CDS | 45.0% | |
| GAAAATGGGCACTCCTATTG+GGG | + | chr8_4:48535214-48535233 | Msa1329730:three_prime_UTR | 45.0% | |
| !!! | TGGGGCAGTTGTAGTTTTGA+TGG | + | chr8_4:48535232-48535251 | Msa1329730:three_prime_UTR | 45.0% |
| CTCGTTTATGAGACAGCGAG+TGG | + | chr8_4:48527505-48527524 | Msa1329730:five_prime_UTR | 50.0% | |
| GCGAGCTCGTAAGTCAACTT+AGG | + | chr8_4:48527554-48527573 | Msa1329730:five_prime_UTR | 50.0% | |
| GCTCGTAAGTCAACTTAGGG+GGG | + | chr8_4:48527558-48527577 | Msa1329730:five_prime_UTR | 50.0% | |
| CTCCCTTAGAACCCTAACTC+AGG | - | chr8_4:48527738-48527757 | None:intergenic | 50.0% | |
| GCTTACCGAGACTGCAAGAA+GGG | - | chr8_4:48527859-48527878 | None:intergenic | 50.0% | |
| CTCGGTAAGCCATCGACAAT+CGG | + | chr8_4:48527869-48527888 | Msa1329730:intron | 50.0% | |
| ! | CGACGCTGCTAAACTTTTGG+TGG | + | chr8_4:48528174-48528193 | Msa1329730:intron | 50.0% |
| GCTTGAGCTCATCGTGTCAT+TGG | + | chr8_4:48528548-48528567 | Msa1329730:CDS | 50.0% | |
| GATAATCGCAAGGGAGCAAG+GGG | - | chr8_4:48528841-48528860 | None:intergenic | 50.0% | |
| GTGATAATCGCAAGGGAGCA+AGG | - | chr8_4:48528843-48528862 | None:intergenic | 50.0% | |
| ! | GGCTCCTTAGCGAAACGTTT+TGG | - | chr8_4:48528886-48528905 | None:intergenic | 50.0% |
| TTGCCTCTTATGTTGCCCGT+AGG | + | chr8_4:48529372-48529391 | Msa1329730:intron | 50.0% | |
| TCTCCTACGGGCAACATAAG+AGG | - | chr8_4:48529378-48529397 | None:intergenic | 50.0% | |
| TACAATGCTACCTGCACTCG+TGG | + | chr8_4:48529462-48529481 | Msa1329730:CDS | 50.0% | |
| TGGATGGGATGGCAAGATAC+AGG | + | chr8_4:48529601-48529620 | Msa1329730:CDS | 50.0% | |
| ATGGGATGGCAAGATACAGG+AGG | + | chr8_4:48529604-48529623 | Msa1329730:CDS | 50.0% | |
| ACCCCTAGTCGCCTAAATTG+CGG | + | chr8_4:48529869-48529888 | Msa1329730:intron | 50.0% | |
| !!! | TTTTGTTGGCTTTGAGGGGG+TGG | + | chr8_4:48529930-48529949 | Msa1329730:intron | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | + | chr8_4:48529947-48529966 | Msa1329730:intron | 50.0% |
| ATCTGCTGCAGCAGCCAATA+GGG | - | chr8_4:48530923-48530942 | None:intergenic | 50.0% | |
| GCATGAGAACCACTCAGCTA+GGG | - | chr8_4:48531377-48531396 | None:intergenic | 50.0% | |
| AGCATGAGAACCACTCAGCT+AGG | - | chr8_4:48531378-48531397 | None:intergenic | 50.0% | |
| TAGCTGAGTGGTTCTCATGC+TGG | + | chr8_4:48531377-48531396 | Msa1329730:intron | 50.0% | |
| AGCTGAGTGGTTCTCATGCT+GGG | + | chr8_4:48531378-48531397 | Msa1329730:intron | 50.0% | |
| AGGCCGTGGTTCATGTTGAA+CGG | + | chr8_4:48531408-48531427 | Msa1329730:intron | 50.0% | |
| CCCTAAATGTAGGGTCATGC+TGG | + | chr8_4:48531684-48531703 | Msa1329730:intron | 50.0% | |
| GCCAGCATGACCCTACATTT+AGG | - | chr8_4:48531688-48531707 | None:intergenic | 50.0% | |
| CATAGGAAACAGAGCTCACG+CGG | + | chr8_4:48531877-48531896 | Msa1329730:intron | 50.0% | |
| ! | TGCTGCTCGAGTCTAAAGCA+AGG | - | chr8_4:48532349-48532368 | None:intergenic | 50.0% |
| ! | GCACACAGGAGTGTGTAGTT+GGG | - | chr8_4:48533029-48533048 | None:intergenic | 50.0% |
| ! | TGCACACAGGAGTGTGTAGT+TGG | - | chr8_4:48533030-48533049 | None:intergenic | 50.0% |
| GTGTGTGTGATGTTGCACAC+AGG | - | chr8_4:48533043-48533062 | None:intergenic | 50.0% | |
| GCATTGGATTCCGAAGGATG+TGG | + | chr8_4:48533324-48533343 | Msa1329730:CDS | 50.0% | |
| ACAAGGGGGGGATTTAATGG+TGG | - | chr8_4:48533544-48533563 | None:intergenic | 50.0% | |
| AGCACAAGGGGGGGATTTAA+TGG | - | chr8_4:48533547-48533566 | None:intergenic | 50.0% | |
| CAAAAGTCGATGGACACACC+TGG | - | chr8_4:48533955-48533974 | None:intergenic | 50.0% | |
| AAACCCGTGATCTTGCCGAA+TGG | + | chr8_4:48534409-48534428 | Msa1329730:intron | 50.0% | |
| TCTCCATTCGGCAAGATCAC+GGG | - | chr8_4:48534415-48534434 | None:intergenic | 50.0% | |
| GCGGATCTTTCCAAGGCTTT+CGG | + | chr8_4:48534614-48534633 | Msa1329730:CDS | 50.0% | |
| GATCTTTCCAAGGCTTTCGG+TGG | + | chr8_4:48534617-48534636 | Msa1329730:CDS | 50.0% | |
| ! | AGGTGTGTAGCTTTTCTGGG+AGG | + | chr8_4:48534698-48534717 | Msa1329730:intron | 50.0% |
| TGGTCAGCAGACAGTTGGAA+TGG | - | chr8_4:48534814-48534833 | None:intergenic | 50.0% | |
| ! | TGGCCTTAAGTAGCTGGAGA+TGG | - | chr8_4:48534834-48534853 | None:intergenic | 50.0% |
| ! | TAAGGCCACATTTTGTCCGC+TGG | + | chr8_4:48534846-48534865 | Msa1329730:CDS | 50.0% |
| CTTGACCAGCGGACAAAATG+TGG | - | chr8_4:48534854-48534873 | None:intergenic | 50.0% | |
| ACTATCACTGAGCTCCTCGT+TGG | - | chr8_4:48534903-48534922 | None:intergenic | 50.0% | |
| AACGAGGAGCTCAGTGATAG+TGG | + | chr8_4:48534902-48534921 | Msa1329730:CDS | 50.0% | |
| GGTTTCAGGCACAGATGGAA+GGG | + | chr8_4:48535068-48535087 | Msa1329730:CDS | 50.0% | |
| ATAGCAAGTCTTTGACGCCC+TGG | + | chr8_4:48535421-48535440 | Msa1329730:three_prime_UTR | 50.0% | |
| AGCTCGCGTAGTACTTGCCT+TGG | - | chr8_4:48527541-48527560 | None:intergenic | 55.0% | |
| GGCTTACCGAGACTGCAAGA+AGG | - | chr8_4:48527860-48527879 | None:intergenic | 55.0% | |
| GGGGTGGACCGCAATAAAGA+CGG | - | chr8_4:48529854-48529873 | None:intergenic | 55.0% | |
| GCAATTTAGGCGACTAGGGG+TGG | - | chr8_4:48529870-48529889 | None:intergenic | 55.0% | |
| GCCGCAATTTAGGCGACTAG+GGG | - | chr8_4:48529873-48529892 | None:intergenic | 55.0% | |
| GGCCGCAATTTAGGCGACTA+GGG | - | chr8_4:48529874-48529893 | None:intergenic | 55.0% | |
| AGGCCGCAATTTAGGCGACT+AGG | - | chr8_4:48529875-48529894 | None:intergenic | 55.0% | |
| GTCGCCTAAATTGCGGCCTT+TGG | + | chr8_4:48529876-48529895 | Msa1329730:intron | 55.0% | |
| ! | GGTGTTGGAGGCTGCAATGA+AGG | - | chr8_4:48529906-48529925 | None:intergenic | 55.0% |
| CTGCAGCAGCCAATAGGGAA+TGG | - | chr8_4:48530918-48530937 | None:intergenic | 55.0% | |
| CATCTGCTGCAGCAGCCAAT+AGG | - | chr8_4:48530924-48530943 | None:intergenic | 55.0% | |
| ! | CTATTGGCTGCTGCAGCAGA+TGG | + | chr8_4:48530922-48530941 | Msa1329730:intron | 55.0% |
| GGCTAACAACCCTAGCTGAG+TGG | + | chr8_4:48531365-48531384 | Msa1329730:intron | 55.0% | |
| TTCTCATGCTGGGCTCTGTC+AGG | + | chr8_4:48531388-48531407 | Msa1329730:intron | 55.0% | |
| !!! | TTGTTTTGGGAGTGGGGGAC+TGG | + | chr8_4:48532395-48532414 | Msa1329730:intron | 55.0% |
| CTGTCAAAGCAAGGGCCGAT+TGG | + | chr8_4:48532993-48533012 | Msa1329730:CDS | 55.0% | |
| GCATGCGCATTGGATTCCGA+AGG | + | chr8_4:48533318-48533337 | Msa1329730:CDS | 55.0% | |
| ! | AAAACGAGGGTGCAGGGTGA+TGG | - | chr8_4:48534065-48534084 | None:intergenic | 55.0% |
| GGAGATGGTCAGCAGACAGT+TGG | - | chr8_4:48534819-48534838 | None:intergenic | 55.0% | |
| !! | TATGGCCGGGAGTGTTGAAG+CGG | + | chr8_4:48534985-48535004 | Msa1329730:CDS | 55.0% |
| AAGACCCGCTTCAACACTCC+CGG | - | chr8_4:48534993-48535012 | None:intergenic | 55.0% | |
| GGGTTTCAGGCACAGATGGA+AGG | + | chr8_4:48535067-48535086 | Msa1329730:CDS | 55.0% | |
| CGAGTGGAGTGCAGAAGCCA+AGG | + | chr8_4:48527521-48527540 | Msa1329730:five_prime_UTR | 60.0% | |
| TTCAGAGCAGCATGCACCCG+AGG | - | chr8_4:48528799-48528818 | None:intergenic | 60.0% | |
| GCGGTCCTCACCTTACAAGC+CGG | + | chr8_4:48530007-48530026 | Msa1329730:intron | 60.0% | |
| ! | AAGCAAGGGCCGATTGGCTG+AGG | + | chr8_4:48532999-48533018 | Msa1329730:CDS | 60.0% |
| GCTCGAGGCGGATCTTTCCA+AGG | + | chr8_4:48534607-48534626 | Msa1329730:CDS | 60.0% | |
| !! | ATGGCCGGGAGTGTTGAAGC+GGG | + | chr8_4:48534986-48535005 | Msa1329730:CDS | 60.0% |
| TGCTGGGCTCTGTCAGGCCG+TGG | + | chr8_4:48531394-48531413 | Msa1329730:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 48527429 | 48535560 | 48527429 | ID=Msa1329730;Name=Msa1329730 |
| chr8_4 | mRNA | 48527429 | 48535560 | 48527429 | ID=Msa1329730-mRNA-1;Parent=Msa1329730;Name=Msa1329730-mRNA-1;_AED=0.07;_eAED=0.07;_QI=228|1|1|1|0.93|0.87|16|419|634 |
| chr8_4 | exon | 48527429 | 48527622 | 48527429 | ID=Msa1329730-mRNA-1:exon:13945;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48527725 | 48527872 | 48527725 | ID=Msa1329730-mRNA-1:exon:13946;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48528109 | 48528192 | 48528109 | ID=Msa1329730-mRNA-1:exon:13947;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48528308 | 48528379 | 48528308 | ID=Msa1329730-mRNA-1:exon:13948;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48528474 | 48528569 | 48528474 | ID=Msa1329730-mRNA-1:exon:13949;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48528670 | 48528906 | 48528670 | ID=Msa1329730-mRNA-1:exon:13950;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48529394 | 48529504 | 48529394 | ID=Msa1329730-mRNA-1:exon:13951;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48529593 | 48529703 | 48529593 | ID=Msa1329730-mRNA-1:exon:13952;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48532895 | 48533020 | 48532895 | ID=Msa1329730-mRNA-1:exon:13953;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48533134 | 48533202 | 48533134 | ID=Msa1329730-mRNA-1:exon:13954;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48533303 | 48533409 | 48533303 | ID=Msa1329730-mRNA-1:exon:13955;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48533674 | 48533757 | 48533674 | ID=Msa1329730-mRNA-1:exon:13956;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48533868 | 48533955 | 48533868 | ID=Msa1329730-mRNA-1:exon:13957;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48534210 | 48534329 | 48534210 | ID=Msa1329730-mRNA-1:exon:13958;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48534515 | 48534699 | 48534515 | ID=Msa1329730-mRNA-1:exon:13959;Parent=Msa1329730-mRNA-1 |
| chr8_4 | exon | 48534841 | 48535560 | 48534841 | ID=Msa1329730-mRNA-1:exon:13960;Parent=Msa1329730-mRNA-1 |
| chr8_4 | five_prime_UTR | 48527429 | 48527622 | 48527429 | ID=Msa1329730-mRNA-1:five_prime_utr;Parent=Msa1329730-mRNA-1 |
| chr8_4 | five_prime_UTR | 48527725 | 48527758 | 48527725 | ID=Msa1329730-mRNA-1:five_prime_utr;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48527759 | 48527872 | 48527759 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48528109 | 48528192 | 48528109 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48528308 | 48528379 | 48528308 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48528474 | 48528569 | 48528474 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48528670 | 48528906 | 48528670 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48529394 | 48529504 | 48529394 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48529593 | 48529703 | 48529593 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48532895 | 48533020 | 48532895 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48533134 | 48533202 | 48533134 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48533303 | 48533409 | 48533303 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48533674 | 48533757 | 48533674 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48533868 | 48533955 | 48533868 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48534210 | 48534329 | 48534210 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48534515 | 48534699 | 48534515 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | CDS | 48534841 | 48535141 | 48534841 | ID=Msa1329730-mRNA-1:cds;Parent=Msa1329730-mRNA-1 |
| chr8_4 | three_prime_UTR | 48535142 | 48535560 | 48535142 | ID=Msa1329730-mRNA-1:three_prime_utr;Parent=Msa1329730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
