AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1165270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165270 MtrunA17_Chr7g0271871 98.496 532 8 0 1 532 1 532 0.0 1078
Msa1165270 MtrunA17_Chr1g0192541 88.910 532 59 0 1 532 1 532 0.0 989
Msa1165270 MtrunA17_Chr2g0294881 83.271 532 85 3 1 531 1 529 0.0 910
Msa1165270 MtrunA17_Chr4g0068051 71.985 539 132 6 1 531 1 528 0.0 783
Msa1165270 MtrunA17_Chr4g0074371 77.230 426 97 0 79 504 1 426 0.0 699
Msa1165270 MtrunA17_Chr4g0075701 71.163 430 122 2 70 498 3 431 0.0 635
Msa1165270 MtrunA17_Chr4g0075691 73.005 426 114 1 83 507 2 427 0.0 631
Msa1165270 MtrunA17_Chr8g0346871 71.868 423 118 1 110 532 15 436 0.0 622
Msa1165270 MtrunA17_Chr4g0074081 66.234 462 118 3 79 504 1 460 0.0 603
Msa1165270 MtrunA17_Chr1g0174791 70.000 300 87 3 208 504 1 300 3.57e-143 414
Msa1165270 MtrunA17_Chr1g0174791 26.047 215 145 6 108 314 30 238 2.11e-11 65.1
Msa1165270 MtrunA17_Chr7g0271821 45.027 553 247 13 1 499 1 550 8.37e-143 422
Msa1165270 MtrunA17_Chr7g0272761 45.749 494 234 12 14 496 15 485 2.72e-117 355
Msa1165270 MtrunA17_Chr7g0271831 48.821 424 191 10 85 504 7 408 6.11e-112 338
Msa1165270 MtrunA17_Chr4g0004921 60.949 274 57 4 261 532 1 226 5.55e-105 314
Msa1165270 MtrunA17_Chr4g0071961 72.297 148 41 0 364 511 2 149 3.74e-69 221
Msa1165270 MtrunA17_Chr4g0075651 74.286 140 36 0 367 506 9 148 6.87e-68 215
Msa1165270 MtrunA17_Chr1g0181541 30.116 518 317 15 14 499 10 514 9.70e-54 189
Msa1165270 MtrunA17_Chr4g0004931 60.417 144 43 1 110 253 11 140 2.15e-50 169
Msa1165270 MtrunA17_Chr4g0075601 56.028 141 49 1 364 491 1 141 6.06e-45 155
Msa1165270 MtrunA17_Chr4g0071971 68.571 105 32 1 263 366 10 114 3.23e-40 142
Msa1165270 MtrunA17_Chr4g0075621 62.376 101 38 0 79 179 1 101 3.83e-40 141
Msa1165270 MtrunA17_Chr4g0071981 60.976 82 28 1 83 160 2 83 2.60e-26 102
Msa1165270 MtrunA17_Chr4g0075631 82.353 51 9 0 219 269 1 51 1.85e-23 93.2
Msa1165270 MtrunA17_Chr4g0075641 40.909 154 61 6 276 408 2 146 3.08e-18 81.6
Msa1165270 MtrunA17_Chr4g0069541 61.667 60 23 0 322 381 55 114 6.35e-17 78.2
Msa1165270 MtrunA17_Chr7g0237931 27.519 258 180 6 135 392 349 599 5.31e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165270 AT4G16143.2 80.224 536 99 2 1 531 1 534 0.0 868
Msa1165270 AT4G16143.1 80.224 536 99 2 1 531 1 534 0.0 868
Msa1165270 AT3G06720.1 79.252 535 105 4 1 532 1 532 0.0 864
Msa1165270 AT3G06720.2 79.252 535 105 4 1 532 1 532 0.0 864
Msa1165270 AT1G09270.2 73.383 541 130 6 1 531 1 537 0.0 785
Msa1165270 AT1G09270.1 73.383 541 130 6 1 531 1 537 0.0 785
Msa1165270 AT1G02690.1 69.630 540 152 5 1 531 1 537 0.0 771
Msa1165270 AT1G02690.2 69.501 541 152 6 1 531 1 538 0.0 766
Msa1165270 AT4G02150.1 70.315 539 143 5 1 531 1 530 0.0 761
Msa1165270 AT1G09270.3 77.193 456 99 3 79 531 2 455 0.0 705
Msa1165270 AT5G49310.1 63.872 501 174 4 1 501 1 494 0.0 633
Msa1165270 AT3G05720.1 64.300 493 157 6 13 497 9 490 0.0 613
Msa1165270 AT3G05720.2 64.300 493 157 6 13 497 9 490 0.0 613
Msa1165270 AT4G02150.2 71.325 415 106 3 1 408 1 409 0.0 603
Msa1165270 AT5G52000.1 52.381 420 187 6 79 497 14 421 1.16e-143 421
Msa1165270 AT5G49305.5 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1165270 AT5G49305.3 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1165270 AT5G49305.4 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1165270 AT5G49305.1 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1165270 AT5G49305.2 42.691 431 186 9 78 502 2 377 5.13e-100 307
Msa1165270 AT1G32880.1 63.265 147 49 3 363 507 40 183 8.57e-56 185
Msa1165270 AT5G03070.1 28.958 518 323 12 14 499 10 514 1.27e-51 184

Find 201 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGTTCTTATGTTCTTTA+AGG 0.042859 7_4:-57107465 Msa1165270:three_prime_UTR
ACTTATGATTCTAGGTATTT+TGG 0.077981 7_4:-57107214 Msa1165270:three_prime_UTR
GCAGGGTTGAAGAGTGAAAT+TGG 0.223129 7_4:+57112069 None:intergenic
ATTATGTGGTGTTACAAATA+TGG 0.227939 7_4:-57107059 Msa1165270:three_prime_UTR
GATGTTCCTGCCGTGCCTTC+TGG 0.268271 7_4:-57107731 Msa1165270:CDS
TGGGAACAAGCAACAGATTC+AGG 0.277528 7_4:-57108407 Msa1165270:intron
CCTCAGATTTATGATTCATT+AGG 0.289947 7_4:-57107092 Msa1165270:three_prime_UTR
AGTGATCATTTCAAGTGATT+TGG 0.291087 7_4:-57107301 Msa1165270:three_prime_UTR
GTGATTGATGCCAGTATAAT+TGG 0.305012 7_4:-57108294 Msa1165270:CDS
CCAGGTGATGCTTCTCAATC+AGG 0.305394 7_4:-57107773 Msa1165270:CDS
CACCTACCAGCCTTGGTTAC+AGG 0.310563 7_4:-57111136 Msa1165270:CDS
ATCTAATCTACTCGAGAAAA+AGG 0.313044 7_4:-57111712 Msa1165270:intron
AAGGTTCAGCCTTGGTAAAT+AGG 0.318530 7_4:-57107446 Msa1165270:three_prime_UTR
TAAATATTAGAGTTTGCTTT+TGG 0.324152 7_4:-57107327 Msa1165270:three_prime_UTR
GATTGACGAAGCTGAGGGTT+TGG 0.332266 7_4:-57107900 Msa1165270:CDS
AGGGCTTGAAAACATCTTAA+AGG 0.333351 7_4:-57107981 Msa1165270:CDS
AGTATGGCAGTTCGACAGTT+GGG 0.344014 7_4:-57107508 Msa1165270:three_prime_UTR
GGCCGTTACTGGACCGGCTT+GGG 0.345727 7_4:-57107425 Msa1165270:three_prime_UTR
TTTCTTCCCTCCGATTCTTC+CGG 0.351570 7_4:+57111793 None:intergenic
TGCCAGTATAATTGGTCCTT+TGG 0.355834 7_4:-57108286 Msa1165270:CDS
GTTTCTGAGCATAGAAAGTT+TGG 0.355939 7_4:+57110133 None:intergenic
TGGATTCAACTTTAACTAGA+TGG 0.358677 7_4:-57107708 Msa1165270:exon
AGGAAAGGGGTTTATATTGC+AGG 0.365118 7_4:+57112051 None:intergenic
CAATCAGGGTTCAACTTTGG+TGG 0.368535 7_4:-57107758 Msa1165270:CDS
TGTCAGGCCGTGTGGGCATT+GGG 0.369223 7_4:-57110245 Msa1165270:intron
AGACTTCTTCATCATTTGAA+TGG 0.376843 7_4:+57109311 None:intergenic
AGCAGAAAGGAGTGAGGGTT+TGG 0.379394 7_4:+57112014 None:intergenic
GCATCAAGAAGGAAGCTTGC+TGG 0.387204 7_4:-57108450 Msa1165270:CDS
CTGTCAGGCCGTGTGGGCAT+TGG 0.388924 7_4:-57110246 Msa1165270:intron
GCTTTGACAAATATAGCTTC+TGG 0.398936 7_4:-57110758 Msa1165270:CDS
CAGCCTTGGTTACAGGAATC+TGG 0.399141 7_4:-57111129 Msa1165270:CDS
ATCAGTGAGGTTCTCCAGTA+TGG 0.404246 7_4:-57107524 Msa1165270:three_prime_UTR
CAACTGTCGAACTGCCATAC+TGG 0.405922 7_4:+57107510 None:intergenic
TCGGTTCTCGCGTTTGCGTT+AGG 0.408259 7_4:+57111894 None:intergenic
TGGAGCTTTGCTTCCTCTGT+TGG 0.414916 7_4:-57110174 Msa1165270:CDS
TAGTGATGATGTTCGTGAAC+AGG 0.421824 7_4:-57110663 Msa1165270:intron
ATTGTGACAGTTTGTCTTGA+AGG 0.422808 7_4:-57108001 Msa1165270:CDS
AGATGCCGTGATCTTGTTCT+CGG 0.423165 7_4:-57110200 Msa1165270:CDS
TTTCGGAAGTTGCTTTCAAT+TGG 0.424061 7_4:-57111067 Msa1165270:intron
TTGAGGCAACAACTCAGTTT+CGG 0.428701 7_4:-57111084 Msa1165270:CDS
AGCGTACCACTTATGATTCT+AGG 0.429517 7_4:-57107222 Msa1165270:three_prime_UTR
AAGATATGAAAGTGCCCAAC+AGG 0.430566 7_4:+57109279 None:intergenic
GATGAAAGAATAGTATCATT+TGG 0.432245 7_4:+57107185 None:intergenic
TCTCAATCAGGGTTCAACTT+TGG 0.432782 7_4:-57107761 Msa1165270:CDS
TAGGATTTCTATTCATTATG+TGG 0.441663 7_4:-57107073 Msa1165270:three_prime_UTR
ACGCTGACTCCAACCTTAGC+AGG 0.452189 7_4:+57107240 None:intergenic
TGAAGATTCTCGAGACATAC+TGG 0.452976 7_4:-57107823 Msa1165270:CDS
GGGAACAGTTGGGTTGTGGC+CGG 0.459891 7_4:-57107371 Msa1165270:three_prime_UTR
CAGGGTTGAAGAGTGAAATT+GGG 0.460877 7_4:+57112070 None:intergenic
GACCAAAGGACCAATTATAC+TGG 0.463096 7_4:+57108284 None:intergenic
CAACACTGAGATTTATGAAA+AGG 0.463560 7_4:-57107849 Msa1165270:CDS
CTTGGATCGGAATAGAATTA+CGG 0.465542 7_4:+57112105 None:intergenic
CTGGCAAGTGCAGGAAGTGC+AGG 0.465783 7_4:+57109340 None:intergenic
GCACTTTCATATCTTTCTGA+TGG 0.469094 7_4:-57109271 Msa1165270:CDS
AGTCTTGACTGATGCCTGTT+GGG 0.470829 7_4:-57109293 Msa1165270:CDS
GTTGTAGTTTGAGGCAGCAT+GGG 0.471388 7_4:-57110780 Msa1165270:intron
AGACAAACTGTCACAATCCT+AGG 0.471935 7_4:+57108007 None:intergenic
TGGGCATTGGGAAATGTTGC+TGG 0.473260 7_4:-57110233 Msa1165270:CDS
AAAGAGAGGAATGAAGGAAA+GGG 0.477098 7_4:+57112037 None:intergenic
GGACACTCTCAAACTTCTGC+AGG 0.478892 7_4:-57110103 Msa1165270:CDS
TTTCCAACTGTGCGTAGAGC+AGG 0.479185 7_4:+57109064 None:intergenic
CGTGATCTTGTTCTCGGTCA+TGG 0.484918 7_4:-57110194 Msa1165270:CDS
TAAATAGGCCGTTACTGGAC+CGG 0.490100 7_4:-57107431 Msa1165270:three_prime_UTR
AGGCCGTTACTGGACCGGCT+TGG 0.491523 7_4:-57107426 Msa1165270:three_prime_UTR
GAGTGAGGGTTTGGAAAGAG+AGG 0.493285 7_4:+57112023 None:intergenic
TGATAATAACATGCAGTTTG+AGG 0.493472 7_4:-57111101 Msa1165270:CDS
TTGTGACAGTTTGTCTTGAA+GGG 0.493627 7_4:-57108000 Msa1165270:CDS
CATACAACAGGGGAACAGTT+GGG 0.493946 7_4:-57107381 Msa1165270:three_prime_UTR
TACTCACATGTCCTGATCCT+AGG 0.494731 7_4:-57108024 Msa1165270:CDS
CAGATTCCTGTAACCAAGGC+TGG 0.496109 7_4:+57111130 None:intergenic
ATCATTTGAATGGATGAGAC+TGG 0.497906 7_4:+57109321 None:intergenic
ATCAAGAGGTTCTTAAGAGA+AGG 0.500451 7_4:+57108490 None:intergenic
TCTAATATTTAACTCGGAAG+TGG 0.500946 7_4:+57107339 None:intergenic
AGTGAAATTGGGTATGAAAG+TGG 0.502202 7_4:+57112081 None:intergenic
TTGAAGCTGGTGTCTGTAGC+CGG 0.506023 7_4:-57109222 Msa1165270:CDS
GCATCACTGATGGCGTGAAT+CGG 0.506234 7_4:-57107934 Msa1165270:CDS
ATTGGGTATGAAAGTGGACT+TGG 0.510609 7_4:+57112087 None:intergenic
CAGGTGATGCTTCTCAATCA+GGG 0.510659 7_4:-57107772 Msa1165270:CDS
TGGTTGAGATCCGGAAGAAT+CGG 0.510945 7_4:-57111803 Msa1165270:CDS
TCGGAAGTGGCAAGAAAAGC+CGG 0.511762 7_4:+57107352 None:intergenic
CTTGAAAACATCTTAAAGGT+AGG 0.512889 7_4:-57107977 Msa1165270:CDS
AGGATAACTTGGTTGAGATC+CGG 0.514824 7_4:-57111812 Msa1165270:CDS
TAATGCACCCTTGACTTACC+AGG 0.515624 7_4:+57108062 None:intergenic
GGTGCAAATGACAAAATTCA+AGG 0.516277 7_4:-57109250 Msa1165270:CDS
CCTGATTGAGAAGCATCACC+TGG 0.519394 7_4:+57107773 None:intergenic
GTTTGGAAAGAGAGGAATGA+AGG 0.519537 7_4:+57112031 None:intergenic
TTGAAAACATCTTAAAGGTA+GGG 0.520099 7_4:-57107976 Msa1165270:CDS
ACAATTTCGAACATCACAGC+TGG 0.521802 7_4:-57108427 Msa1165270:CDS
GGAATAAGCACAGAAGGAGA+TGG 0.522068 7_4:+57109085 None:intergenic
AGTCCAGATTCCTGTAACCA+AGG 0.523005 7_4:+57111126 None:intergenic
AAAATTGGTCGACAGGTACC+TGG 0.523379 7_4:-57108080 Msa1165270:intron
GGCAATCTCAAATGCTACAT+CGG 0.524735 7_4:-57108214 Msa1165270:CDS
GTGGCGGTTGATGCGGAAGA+AGG 0.528330 7_4:-57111849 Msa1165270:CDS
AGAACGTAGCCCACCGATTG+AGG 0.529104 7_4:-57110953 Msa1165270:CDS
ACCTGATCAAAAGCAGGTTG+TGG 0.529289 7_4:+57110074 None:intergenic
CTTTCATCATTAAAGTTGCA+AGG 0.530216 7_4:-57107170 Msa1165270:three_prime_UTR
GCAATCTCAAATGCTACATC+GGG 0.530239 7_4:-57108213 Msa1165270:CDS
GCTTGTATAACCTCCTCAAT+CGG 0.530974 7_4:+57110940 None:intergenic
GTATGGCAGTTCGACAGTTG+GGG 0.531650 7_4:-57107507 Msa1165270:three_prime_UTR
AGATTAGATTGAACTGATGC+AGG 0.532270 7_4:+57111726 None:intergenic
ACATACAACAGGGGAACAGT+TGG 0.532326 7_4:-57107382 Msa1165270:three_prime_UTR
GTTCCTGCCGTGCCTTCTGG+TGG 0.536067 7_4:-57107728 Msa1165270:CDS
TCTCAGTGTTGTCATGACTC+TGG 0.536088 7_4:+57107861 None:intergenic
TGTTGTAGTTTGAGGCAGCA+TGG 0.536379 7_4:-57110781 Msa1165270:intron
GGAAAGGGGTTTATATTGCA+GGG 0.536788 7_4:+57112052 None:intergenic
GAAAGAGAGGAATGAAGGAA+AGG 0.538106 7_4:+57112036 None:intergenic
GATGACGAGGCTATGCCTCC+AGG 0.538922 7_4:-57107791 Msa1165270:CDS
ACAGGGGAACAGTTGGGTTG+TGG 0.541391 7_4:-57107375 Msa1165270:three_prime_UTR
ACTGTCACAATCCTAGGATC+AGG 0.541962 7_4:+57108013 None:intergenic
GTTGGAACACCTACCAGCCT+TGG 0.541974 7_4:-57111143 Msa1165270:CDS
AGAACAAGATCACGGCATCT+AGG 0.541982 7_4:+57110203 None:intergenic
CTTTATACCTGATCAAAAGC+AGG 0.544346 7_4:+57110068 None:intergenic
AAACACTAAGGTAGTAATTG+AGG 0.546623 7_4:-57110726 Msa1165270:CDS
AGAAGGTCGGAGACGGAGAG+AGG 0.547856 7_4:-57111832 Msa1165270:CDS
AACCCAAGCCGGTCCAGTAA+CGG 0.547933 7_4:+57107423 None:intergenic
TGTGGACTGTCAGGCCGTGT+GGG 0.549793 7_4:-57110252 Msa1165270:intron
AATCCACCAGAAGGCACGGC+AGG 0.551892 7_4:+57107725 None:intergenic
GTATCGATTCCGACGAACCT+CGG 0.552883 7_4:+57111875 None:intergenic
AAGAGAGGAATGAAGGAAAG+GGG 0.553016 7_4:+57112038 None:intergenic
AGAAGGCACGGCAGGAACAT+CGG 0.557422 7_4:+57107733 None:intergenic
CAGTATGGCAGTTCGACAGT+TGG 0.558125 7_4:-57107509 Msa1165270:three_prime_UTR
AAAATACCTAGAATCATAAG+TGG 0.559223 7_4:+57107216 None:intergenic
TATCAAGAAGGAAGCAGCCT+GGG 0.559372 7_4:-57108235 Msa1165270:CDS
TGTTCTTTAAGGTTCAGCCT+TGG 0.560151 7_4:-57107454 Msa1165270:three_prime_UTR
GAGACGGAGAGAGGATAACT+TGG 0.560975 7_4:-57111823 Msa1165270:CDS
ATTCCTGCTCTACGCACAGT+TGG 0.563062 7_4:-57109067 Msa1165270:CDS
ATTCAAGGCGTAATTGAAGC+TGG 0.564008 7_4:-57109235 Msa1165270:CDS
ATCTCAAATGCTACATCGGG+TGG 0.565698 7_4:-57108210 Msa1165270:CDS
TGAAAACATCTTAAAGGTAG+GGG 0.566752 7_4:-57107975 Msa1165270:CDS
AGAGCAGGAATAAGCACAGA+AGG 0.573010 7_4:+57109079 None:intergenic
ATGCGGAAGAAGGTCGGAGA+CGG 0.573816 7_4:-57111839 Msa1165270:CDS
ATTGAGGAGGTTATACAAGC+TGG 0.574779 7_4:-57110937 Msa1165270:CDS
GACAGGTACCTGGTAAGTCA+AGG 0.575549 7_4:-57108070 Msa1165270:intron
AAGAAAGCTTGCAGAAGAAG+AGG 0.576091 7_4:-57111776 Msa1165270:CDS
TTGCAGAAGAAGAGGCGTGA+AGG 0.577170 7_4:-57111768 Msa1165270:CDS
AAGATAATAACCTGCAGCTG+TGG 0.578665 7_4:+57110871 None:intergenic
GACACTCTCAAACTTCTGCA+GGG 0.582716 7_4:-57110102 Msa1165270:CDS
ATTCACGCCATCAGTGATGC+CGG 0.582855 7_4:+57107937 None:intergenic
GATTCTCGAGACATACTGGT+TGG 0.583097 7_4:-57107819 Msa1165270:CDS
CGGTTGATGCGGAAGAAGGT+CGG 0.583578 7_4:-57111845 Msa1165270:CDS
TGTAGCATTTGAGATTGCCC+AGG 0.583736 7_4:+57108218 None:intergenic
AAGTCTTGACTGATGCCTGT+TGG 0.583997 7_4:-57109294 Msa1165270:CDS
TGGAACATCTGAAAACACTA+AGG 0.585901 7_4:-57110738 Msa1165270:CDS
TATGGCAGTTCGACAGTTGG+GGG 0.586736 7_4:-57107506 Msa1165270:three_prime_UTR
TGGATGAGACTGGCAAGTGC+AGG 0.586919 7_4:+57109331 None:intergenic
GTGTGGACTGTCAGGCCGTG+TGG 0.587261 7_4:-57110253 Msa1165270:intron
ATATCAAGAAGGAAGCAGCC+TGG 0.587274 7_4:-57108236 Msa1165270:CDS
GTTGAATCCACCAGAAGGCA+CGG 0.589872 7_4:+57107721 None:intergenic
TCTCGAGACATACTGGTTGG+AGG 0.590172 7_4:-57107816 Msa1165270:CDS
GAATAAGCACAGAAGGAGAT+GGG 0.590390 7_4:+57109086 None:intergenic
AGTGAAAGAGCGAAGCAGAA+AGG 0.590626 7_4:+57112001 None:intergenic
ACAGTTGGAAATATTGTCAC+TGG 0.591504 7_4:-57109052 Msa1165270:CDS
GGTTCGTCGGAATCGATACA+AGG 0.595021 7_4:-57111871 Msa1165270:CDS
ACGCGAGAACCGAGGTTCGT+CGG 0.595335 7_4:-57111884 Msa1165270:CDS
TGTATAACCTCCTCAATCGG+TGG 0.596128 7_4:+57110943 None:intergenic
TGCTGAGTTTGATATCAAGA+AGG 0.598148 7_4:-57108247 Msa1165270:CDS
TTTACAATCGGTTTAACGAA+CGG 0.598850 7_4:+57111932 None:intergenic
CAGTGTTGTCATGACTCTGG+AGG 0.600196 7_4:+57107864 None:intergenic
AACATTTCCCAATGCCCACA+CGG 0.600269 7_4:+57110238 None:intergenic
GTATGAAAGTGGACTTGGAT+CGG 0.602378 7_4:+57112092 None:intergenic
ATACTGGAGAACCTCACTGA+TGG 0.603112 7_4:+57107526 None:intergenic
ATTAAAGTTGCAAGGAACCT+CGG 0.606361 7_4:-57107162 Msa1165270:three_prime_UTR
AGCGAAGCAGAAAGGAGTGA+GGG 0.608076 7_4:+57112009 None:intergenic
ATACAAGGTGGCGGTTGATG+CGG 0.609006 7_4:-57111856 Msa1165270:CDS
GTATAACCTCCTCAATCGGT+GGG 0.609405 7_4:+57110944 None:intergenic
TTGAGATCCGGAAGAATCGG+AGG 0.610209 7_4:-57111800 Msa1165270:CDS
ACAGTAGAAGCTCAACAAGC+CGG 0.611612 7_4:+57109203 None:intergenic
ACTAAGGTAGTAATTGAGGC+AGG 0.612619 7_4:-57110722 Msa1165270:CDS
CCTAATGAATCATAAATCTG+AGG 0.614833 7_4:+57107092 None:intergenic
GCAAACTCTAATATTTAACT+CGG 0.618670 7_4:+57107333 None:intergenic
GAGCGAAGCAGAAAGGAGTG+AGG 0.618742 7_4:+57112008 None:intergenic
ACTGATGCAGGCATCTGCTG+AGG 0.637302 7_4:+57111738 None:intergenic
CTGGTTGGAGGAAGATGACG+AGG 0.640896 7_4:-57107804 Msa1165270:CDS
TAAGAGAAGGAAGAACTCGA+TGG 0.641399 7_4:+57108503 None:intergenic
ACAGGTACCTGGTAAGTCAA+GGG 0.643325 7_4:-57108069 Msa1165270:intron
TGAAATGATTGACGAAGCTG+AGG 0.643868 7_4:-57107906 Msa1165270:CDS
CAATTTCGAACATCACAGCT+GGG 0.644095 7_4:-57108426 Msa1165270:CDS
ACATGTGAGTAGATCACACA+AGG 0.644923 7_4:+57108036 None:intergenic
TTCCTGTAACCAAGGCTGGT+AGG 0.648193 7_4:+57111134 None:intergenic
TGGAGATGACTTGCAGACAC+AGG 0.648488 7_4:-57109032 Msa1165270:intron
CTATGCTCAGAAACGCCACA+TGG 0.649323 7_4:-57110124 Msa1165270:CDS
TCATTCAATTGCGCCAACAG+AGG 0.649416 7_4:+57110161 None:intergenic
AATCACTTGAAATGATCACT+AGG 0.649903 7_4:+57107304 None:intergenic
TGTTCACGAACATCATCACT+AGG 0.652458 7_4:+57110665 None:intergenic
CATCATCACTAGGAGAAGCA+AGG 0.654239 7_4:+57110675 None:intergenic
ACACTCTCAAACTTCTGCAG+GGG 0.658228 7_4:-57110101 Msa1165270:CDS
TTAAAGTTGAATCCACCAGA+AGG 0.661830 7_4:+57107716 None:intergenic
TCGGAATCGATACAAGGTGG+CGG 0.663630 7_4:-57111865 Msa1165270:CDS
TGAGATCCGGAAGAATCGGA+GGG 0.664863 7_4:-57111799 Msa1165270:CDS
ACGTAGCCCACCGATTGAGG+AGG 0.667976 7_4:-57110950 Msa1165270:CDS
CATGACCGAGAACAAGATCA+CGG 0.670358 7_4:+57110195 None:intergenic
CAGTAACGGCCTATTTACCA+AGG 0.682650 7_4:+57107437 None:intergenic
TAACGCAAACGCGAGAACCG+AGG 0.690745 7_4:-57111892 Msa1165270:CDS
ATGGCAGTTCGACAGTTGGG+GGG 0.690929 7_4:-57107505 Msa1165270:three_prime_UTR
TAAGCACAGAAGGAGATGGG+TGG 0.711417 7_4:+57109089 None:intergenic
GAAATGATTGACGAAGCTGA+GGG 0.713200 7_4:-57107905 Msa1165270:CDS
GATTGAGAAGCATCACCTGG+AGG 0.716664 7_4:+57107776 None:intergenic
ATCAAGAACTCAATAAAACG+AGG 0.733523 7_4:+57110907 None:intergenic
TCGTCGGAATCGATACAAGG+TGG 0.735526 7_4:-57111868 Msa1165270:CDS
CATGTGAGTAGATCACACAA+GGG 0.757129 7_4:+57108037 None:intergenic
GAAGTTTGAGAGTGTCCATG+TGG 0.759250 7_4:+57110109 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATTATTATAACTCA+TGG - chr7_4:57107715-57107734 Msa1165270:CDS 10.0%
!!! TTTTTGTATACAATTTTTTA+AGG - chr7_4:57108113-57108132 Msa1165270:intron 10.0%
!!! TTTTGTATACAATTTTTTAA+GGG - chr7_4:57108114-57108133 Msa1165270:intron 10.0%
!! TAGTTTATATTGAAAAATTA+TGG - chr7_4:57109363-57109382 Msa1165270:intron 10.0%
!!! TGAAATTCTAATTATTATTT+TGG - chr7_4:57109998-57110017 Msa1165270:intron 10.0%
!!! TATTATTTTACTTTTGATTT+TGG - chr7_4:57110553-57110572 Msa1165270:intron 10.0%
!! CAGATATAAACAAATATTAA+AGG + chr7_4:57109226-57109245 None:intergenic 15.0%
!! AATAAGAAAATTCAAACAAA+TGG + chr7_4:57109279-57109298 None:intergenic 15.0%
!!! TTTTATAACTATTAATCAAG+AGG + chr7_4:57110647-57110666 None:intergenic 15.0%
!!! TGTCATAATCTTTTTAAAAT+TGG - chr7_4:57111025-57111044 Msa1165270:intron 15.0%
!!! TTGTTGTGTTTTTTTTTTTT+TGG - chr7_4:57111477-57111496 Msa1165270:intron 15.0%
!! CAGTAAAAAAAAAAAAAAAC+AGG + chr7_4:57112001-57112020 None:intergenic 15.0%
!!! AATTGAGAAATTGATAATAC+TGG - chr7_4:57107513-57107532 Msa1165270:three_prime_UTR 20.0%
!!! CAAAATTGATGATAGTAATT+AGG - chr7_4:57107642-57107661 Msa1165270:intron 20.0%
!! ACAAGGTTTGATTAATATTA+TGG - chr7_4:57107908-57107927 Msa1165270:CDS 20.0%
!! CTATTGCATAAAATAAAACA+AGG + chr7_4:57108275-57108294 None:intergenic 20.0%
!!! ACCATATAAATTTTACTGAT+AGG + chr7_4:57108528-57108547 None:intergenic 20.0%
!!! TATGGTTTCTTACTTTTTAT+TGG - chr7_4:57108542-57108561 Msa1165270:intron 20.0%
!!! ATGGTTTCTTACTTTTTATT+GGG - chr7_4:57108543-57108562 Msa1165270:intron 20.0%
!! CTTCATTAACAAAAAAAGAA+GGG + chr7_4:57108574-57108593 None:intergenic 20.0%
!! ACTTCATTAACAAAAAAAGA+AGG + chr7_4:57108575-57108594 None:intergenic 20.0%
!!! TTTTTGTTAATGAAGTTAAC+CGG - chr7_4:57108579-57108598 Msa1165270:intron 20.0%
!!! TGATAATTTTTCAACATACA+AGG + chr7_4:57109324-57109343 None:intergenic 20.0%
!! TGAAATTAAAATTAAACGCA+TGG - chr7_4:57110218-57110237 Msa1165270:CDS 20.0%
!!! TTATAAAAAAAGCATCAAGA+AGG - chr7_4:57110659-57110678 Msa1165270:intron 20.0%
!! TTAAAAAGATTATGACATCT+CGG + chr7_4:57111022-57111041 None:intergenic 20.0%
!!! ATGGTATTCATGTTTTATTA+AGG - chr7_4:57111431-57111450 Msa1165270:intron 20.0%
!! GGTAATCTATATGTTATATT+TGG - chr7_4:57111452-57111471 Msa1165270:intron 20.0%
!!! TAAATATTAGAGTTTGCTTT+TGG - chr7_4:57111793-57111812 Msa1165270:CDS 20.0%
!! AAAAAAAAAAAAACAGGACA+GGG + chr7_4:57111995-57112014 None:intergenic 20.0%
!! AAAAAAAAAAAAAACAGGAC+AGG + chr7_4:57111996-57112015 None:intergenic 20.0%
! AACGTAGTAAAGTAGAAAAT+CGG + chr7_4:57107472-57107491 None:intergenic 25.0%
! CGTTGGATAAGTTATTTATT+AGG - chr7_4:57107488-57107507 Msa1165270:three_prime_UTR 25.0%
!! GAAATTGATAATACTGGATT+AGG - chr7_4:57107519-57107538 Msa1165270:three_prime_UTR 25.0%
!! ATATATTGATAGTAGCGATT+AGG - chr7_4:57107551-57107570 Msa1165270:intron 25.0%
! TGAATCAAAACAACATAAAC+AGG + chr7_4:57107676-57107695 None:intergenic 25.0%
!!! AGCAGTGTTTGTTAATTTTA+AGG - chr7_4:57107794-57107813 Msa1165270:CDS 25.0%
!!! GCAGTGTTTGTTAATTTTAA+GGG - chr7_4:57107795-57107814 Msa1165270:CDS 25.0%
! GGTTTGATTAATATTATGGT+AGG - chr7_4:57107912-57107931 Msa1165270:CDS 25.0%
!!! ACAATTTTTTAAGGGACATT+TGG - chr7_4:57108122-57108141 Msa1165270:intron 25.0%
!! TTTTATTGAGTTCTTGATGA+GGG - chr7_4:57108218-57108237 Msa1165270:CDS 25.0%
! GCCTATCAGTAAAATTTATA+TGG - chr7_4:57108524-57108543 Msa1165270:intron 25.0%
!!! GTTCACTTTGATTTTAGATT+TGG - chr7_4:57108634-57108653 Msa1165270:intron 25.0%
!! AAATTTCTTGTTCAAGTTCT+AGG + chr7_4:57109198-57109217 None:intergenic 25.0%
!! AGAACTTGAACAAGAAATTT+TGG - chr7_4:57109198-57109217 Msa1165270:intron 25.0%
! ACAACACAGGTTAAATAATA+TGG + chr7_4:57109471-57109490 None:intergenic 25.0%
! TTTCACATCATAATAACCAA+GGG + chr7_4:57109983-57110002 None:intergenic 25.0%
! ATTTCACATCATAATAACCA+AGG + chr7_4:57109984-57110003 None:intergenic 25.0%
! AATTAAAATTAAACGCATGG+AGG - chr7_4:57110221-57110240 Msa1165270:CDS 25.0%
!!! TTGATTTTGGTTTGTGTTAA+TGG - chr7_4:57110566-57110585 Msa1165270:intron 25.0%
!!! TGATTTTGGTTTGTGTTAAT+GGG - chr7_4:57110567-57110586 Msa1165270:intron 25.0%
! CTTGATTCTTGAAAATTTAC+AGG - chr7_4:57110801-57110820 Msa1165270:intron 25.0%
! TATAAAACCAACAAAATCAC+CGG + chr7_4:57110986-57111005 None:intergenic 25.0%
! TTGAAAACATCTTAAAGGTA+GGG - chr7_4:57111144-57111163 Msa1165270:CDS 25.0%
! CATTGTTCTTATGTTCTTTA+AGG - chr7_4:57111655-57111674 Msa1165270:intron 25.0%
! GCAAACTCTAATATTTAACT+CGG + chr7_4:57111790-57111809 None:intergenic 25.0%
! AAAATACCTAGAATCATAAG+TGG + chr7_4:57111907-57111926 None:intergenic 25.0%
!! ACTTATGATTCTAGGTATTT+TGG - chr7_4:57111906-57111925 Msa1165270:CDS 25.0%
!! CTTATGATTCTAGGTATTTT+GGG - chr7_4:57111907-57111926 Msa1165270:CDS 25.0%
! GATGAAAGAATAGTATCATT+TGG + chr7_4:57111938-57111957 None:intergenic 25.0%
! TAGGATTTCTATTCATTATG+TGG - chr7_4:57112047-57112066 Msa1165270:five_prime_UTR 25.0%
!!! ATTATGTGGTGTTACAAATA+TGG - chr7_4:57112061-57112080 Msa1165270:five_prime_UTR 25.0%
!! GTGTTACAAATATGGTTTTT+GGG - chr7_4:57112069-57112088 Msa1165270:five_prime_UTR 25.0%
!!! AATTTGTTGCACACTATTTT+TGG + chr7_4:57112106-57112125 None:intergenic 25.0%
! TTTACAATCGGTTTAACGAA+CGG + chr7_4:57107191-57107210 None:intergenic 30.0%
! ATACGACATCGTTTTACAAT+CGG + chr7_4:57107203-57107222 None:intergenic 30.0%
ATCTAATCTACTCGAGAAAA+AGG - chr7_4:57107408-57107427 Msa1165270:three_prime_UTR 30.0%
! GATTTTCTACTTTACTACGT+TGG - chr7_4:57107471-57107490 Msa1165270:three_prime_UTR 30.0%
AATTGAGAAATTGATACTGC+TGG - chr7_4:57107576-57107595 Msa1165270:intron 30.0%
AAATGAAGCATAACAAGTAG+GGG + chr7_4:57107767-57107786 None:intergenic 30.0%
CAAATGAAGCATAACAAGTA+GGG + chr7_4:57107768-57107787 None:intergenic 30.0%
TCAAATGAAGCATAACAAGT+AGG + chr7_4:57107769-57107788 None:intergenic 30.0%
AACATGTTCATGATATTCAC+TGG - chr7_4:57107845-57107864 Msa1165270:CDS 30.0%
TGATAATAACATGCAGTTTG+AGG - chr7_4:57108019-57108038 Msa1165270:CDS 30.0%
ATCAAGAACTCAATAAAACG+AGG + chr7_4:57108216-57108235 None:intergenic 30.0%
!! GTTTTATTGAGTTCTTGATG+AGG - chr7_4:57108217-57108236 Msa1165270:CDS 30.0%
TTACTGTATGTTGTAGTTTG+AGG - chr7_4:57108331-57108350 Msa1165270:intron 30.0%
AAACACTAAGGTAGTAATTG+AGG - chr7_4:57108394-57108413 Msa1165270:intron 30.0%
TTACTGATAGGCAAAAACAA+AGG + chr7_4:57108516-57108535 None:intergenic 30.0%
ACACAAGTATAAAGTCCATT+TGG - chr7_4:57109143-57109162 Msa1165270:intron 30.0%
TAGTGGCATCTTGTAAATAA+AGG - chr7_4:57109416-57109435 Msa1165270:intron 30.0%
AATAAAGGTGGTCAAATTTG+TGG - chr7_4:57109431-57109450 Msa1165270:intron 30.0%
! AATTTGTGGTTTGTATGTGA+AGG - chr7_4:57109445-57109464 Msa1165270:intron 30.0%
AGACTTCTTCATCATTTGAA+TGG + chr7_4:57109812-57109831 None:intergenic 30.0%
AGAGAAATAGTAATACACAC+TGG - chr7_4:57110177-57110196 Msa1165270:CDS 30.0%
GCGAATTATAATGAGGAAAT+TGG + chr7_4:57110356-57110375 None:intergenic 30.0%
TGACAAAGCGAATTATAATG+AGG + chr7_4:57110363-57110382 None:intergenic 30.0%
TTCTATTGCTGCTAATCATA+AGG + chr7_4:57110499-57110518 None:intergenic 30.0%
!!! GATTTTGGTTTGTGTTAATG+GGG - chr7_4:57110568-57110587 Msa1165270:intron 30.0%
ATCTGTGTTATCTTTGCATT+TGG - chr7_4:57110758-57110777 Msa1165270:CDS 30.0%
CTTAAATTTACAATGTTCCC+CGG - chr7_4:57110964-57110983 Msa1165270:intron 30.0%
ATAAAACCAACAAAATCACC+GGG + chr7_4:57110985-57111004 None:intergenic 30.0%
!!! TCTTTTTAAAATTGGTCGAC+AGG - chr7_4:57111033-57111052 Msa1165270:intron 30.0%
CTTGAAAACATCTTAAAGGT+AGG - chr7_4:57111143-57111162 Msa1165270:CDS 30.0%
TGAAAACATCTTAAAGGTAG+GGG - chr7_4:57111145-57111164 Msa1165270:CDS 30.0%
CAACACTGAGATTTATGAAA+AGG - chr7_4:57111271-57111290 Msa1165270:intron 30.0%
TGGATTCAACTTTAACTAGA+TGG - chr7_4:57111412-57111431 Msa1165270:intron 30.0%
TGTTGAATTTCTTTAACTGC+AGG - chr7_4:57111558-57111577 Msa1165270:intron 30.0%
TCTAATATTTAACTCGGAAG+TGG + chr7_4:57111784-57111803 None:intergenic 30.0%
AATCACTTGAAATGATCACT+AGG + chr7_4:57111819-57111838 None:intergenic 30.0%
! AGTGATCATTTCAAGTGATT+TGG - chr7_4:57111819-57111838 Msa1165270:CDS 30.0%
!!! TTTCGTTATTTTTCCTGCTA+AGG - chr7_4:57111867-57111886 Msa1165270:CDS 30.0%
CTTTCATCATTAAAGTTGCA+AGG - chr7_4:57111950-57111969 Msa1165270:five_prime_UTR 30.0%
CCTAATGAATCATAAATCTG+AGG + chr7_4:57112031-57112050 None:intergenic 30.0%
CCTCAGATTTATGATTCATT+AGG - chr7_4:57112028-57112047 Msa1165270:five_prime_UTR 30.0%
!! GGTGTTACAAATATGGTTTT+TGG - chr7_4:57112068-57112087 Msa1165270:five_prime_UTR 30.0%
CTTGGATCGGAATAGAATTA+CGG + chr7_4:57107018-57107037 None:intergenic 35.0%
AGTGAAATTGGGTATGAAAG+TGG + chr7_4:57107042-57107061 None:intergenic 35.0%
AAAGAGAGGAATGAAGGAAA+GGG + chr7_4:57107086-57107105 None:intergenic 35.0%
AGATTAGATTGAACTGATGC+AGG + chr7_4:57107397-57107416 None:intergenic 35.0%
GAAATTGATACTGCTGGATT+AGG - chr7_4:57107582-57107601 Msa1165270:intron 35.0%
TGTTGTTATCATTCTGCAGT+TGG - chr7_4:57107959-57107978 Msa1165270:CDS 35.0%
! TTTCGGAAGTTGCTTTCAAT+TGG - chr7_4:57108053-57108072 Msa1165270:CDS 35.0%
GCTTTGACAAATATAGCTTC+TGG - chr7_4:57108362-57108381 Msa1165270:intron 35.0%
TGGAACATCTGAAAACACTA+AGG - chr7_4:57108382-57108401 Msa1165270:intron 35.0%
! ACAAAGGCACAAATTGCATA+TGG + chr7_4:57108500-57108519 None:intergenic 35.0%
TTGTTAATGAAGTTAACCGG+AGG - chr7_4:57108582-57108601 Msa1165270:intron 35.0%
!! GTATGCTGTTTCTAGATTCT+AGG - chr7_4:57108660-57108679 Msa1165270:intron 35.0%
ATGAGATAGATCACACTAGA+TGG + chr7_4:57108821-57108840 None:intergenic 35.0%
GTTTCTGAGCATAGAAAGTT+TGG + chr7_4:57108990-57109009 None:intergenic 35.0%
CTTTATACCTGATCAAAAGC+AGG + chr7_4:57109055-57109074 None:intergenic 35.0%
CACACAGATGAGTAATTACA+AGG - chr7_4:57109112-57109131 Msa1165270:intron 35.0%
AAGTCCATTTGGTACACAAA+TGG - chr7_4:57109154-57109173 Msa1165270:intron 35.0%
AGTCCATTTGGTACACAAAT+GGG - chr7_4:57109155-57109174 Msa1165270:intron 35.0%
!! TTTCAACATACAAGGTGTTG+AGG + chr7_4:57109316-57109335 None:intergenic 35.0%
TGGCATCTTGTAAATAAAGG+TGG - chr7_4:57109419-57109438 Msa1165270:intron 35.0%
CAAAAAGACTGGTAAAACCA+AGG + chr7_4:57109671-57109690 None:intergenic 35.0%
AGTCAGCAAAACAAAAAGAC+TGG + chr7_4:57109682-57109701 None:intergenic 35.0%
ATCATTTGAATGGATGAGAC+TGG + chr7_4:57109802-57109821 None:intergenic 35.0%
GCACTTTCATATCTTTCTGA+TGG - chr7_4:57109849-57109868 Msa1165270:intron 35.0%
GGTGCAAATGACAAAATTCA+AGG - chr7_4:57109870-57109889 Msa1165270:intron 35.0%
ACAGTTGGAAATATTGTCAC+TGG - chr7_4:57110068-57110087 Msa1165270:intron 35.0%
AGGAAATTTGTGCAATTGGA+CGG + chr7_4:57110421-57110440 None:intergenic 35.0%
TGAGAGGAAATTTGTGCAAT+TGG + chr7_4:57110425-57110444 None:intergenic 35.0%
AGTGCAACAGAATATACACA+TGG + chr7_4:57110458-57110477 None:intergenic 35.0%
TATTGCTGCTAATCATAAGG+AGG + chr7_4:57110496-57110515 None:intergenic 35.0%
ATCAAGAGGTTCTTAAGAGA+AGG + chr7_4:57110633-57110652 None:intergenic 35.0%
GTGATTGATGCCAGTATAAT+TGG - chr7_4:57110826-57110845 Msa1165270:intron 35.0%
!!! TTTTGAAGCAAGTTGACCAA+AGG + chr7_4:57110853-57110872 None:intergenic 35.0%
TGCTGAGTTTGATATCAAGA+AGG - chr7_4:57110873-57110892 Msa1165270:intron 35.0%
TCTCATGAACAACTCAAGTA+TGG - chr7_4:57110934-57110953 Msa1165270:CDS 35.0%
CGGGGAACATTGTAAATTTA+AGG + chr7_4:57110966-57110985 None:intergenic 35.0%
TAAAACCAACAAAATCACCG+GGG + chr7_4:57110984-57111003 None:intergenic 35.0%
ATTGTGACAGTTTGTCTTGA+AGG - chr7_4:57111119-57111138 Msa1165270:CDS 35.0%
TTGTGACAGTTTGTCTTGAA+GGG - chr7_4:57111120-57111139 Msa1165270:CDS 35.0%
AGGGCTTGAAAACATCTTAA+AGG - chr7_4:57111139-57111158 Msa1165270:CDS 35.0%
TTAAAGTTGAATCCACCAGA+AGG + chr7_4:57111407-57111426 None:intergenic 35.0%
ACATGATGTCAACACAATAC+AGG + chr7_4:57111541-57111560 None:intergenic 35.0%
!!! TTAACTGCAGGTTTTTTAGC+TGG - chr7_4:57111570-57111589 Msa1165270:intron 35.0%
!!! GTTATTTTTCCTGCTAAGGT+TGG - chr7_4:57111871-57111890 Msa1165270:CDS 35.0%
ATTAAAGTTGCAAGGAACCT+CGG - chr7_4:57111958-57111977 Msa1165270:five_prime_UTR 35.0%
! GTATGAAAGTGGACTTGGAT+CGG + chr7_4:57107031-57107050 None:intergenic 40.0%
! ATTGGGTATGAAAGTGGACT+TGG + chr7_4:57107036-57107055 None:intergenic 40.0%
CAGGGTTGAAGAGTGAAATT+GGG + chr7_4:57107053-57107072 None:intergenic 40.0%
GGAAAGGGGTTTATATTGCA+GGG + chr7_4:57107071-57107090 None:intergenic 40.0%
AGGAAAGGGGTTTATATTGC+AGG + chr7_4:57107072-57107091 None:intergenic 40.0%
AAGAGAGGAATGAAGGAAAG+GGG + chr7_4:57107085-57107104 None:intergenic 40.0%
GAAAGAGAGGAATGAAGGAA+AGG + chr7_4:57107087-57107106 None:intergenic 40.0%
GTTTGGAAAGAGAGGAATGA+AGG + chr7_4:57107092-57107111 None:intergenic 40.0%
AGGATAACTTGGTTGAGATC+CGG - chr7_4:57107308-57107327 Msa1165270:three_prime_UTR 40.0%
AAGAAAGCTTGCAGAAGAAG+AGG - chr7_4:57107344-57107363 Msa1165270:three_prime_UTR 40.0%
CCTTGTAGCTACATACAGAT+GGG + chr7_4:57107894-57107913 None:intergenic 40.0%
ACCTTGTAGCTACATACAGA+TGG + chr7_4:57107895-57107914 None:intergenic 40.0%
TTGAGGCAACAACTCAGTTT+CGG - chr7_4:57108036-57108055 Msa1165270:CDS 40.0%
GCTTGTATAACCTCCTCAAT+CGG + chr7_4:57108183-57108202 None:intergenic 40.0%
ATTGAGGAGGTTATACAAGC+TGG - chr7_4:57108183-57108202 Msa1165270:intron 40.0%
AAGATAATAACCTGCAGCTG+TGG + chr7_4:57108252-57108271 None:intergenic 40.0%
ACTAAGGTAGTAATTGAGGC+AGG - chr7_4:57108398-57108417 Msa1165270:intron 40.0%
GCAAGGAGCTTCACAAAAAT+TGG + chr7_4:57108431-57108450 None:intergenic 40.0%
TGTTCACGAACATCATCACT+AGG + chr7_4:57108458-57108477 None:intergenic 40.0%
! TAGTGATGATGTTCGTGAAC+AGG - chr7_4:57108457-57108476 Msa1165270:CDS 40.0%
AGTCAAGCTAAACATTCCTC+CGG + chr7_4:57108601-57108620 None:intergenic 40.0%
CACTATTATGCATGCAAGTG+AGG - chr7_4:57108698-57108717 Msa1165270:intron 40.0%
ACATTGCCTTGCAATAGTGT+TGG - chr7_4:57108794-57108813 Msa1165270:intron 40.0%
AACATCTTTCCTGTGTTGTG+TGG - chr7_4:57108850-57108869 Msa1165270:intron 40.0%
AAGCCCATTTGTGTACCAAA+TGG + chr7_4:57109161-57109180 None:intergenic 40.0%
GCAGCTATGTTGTTCTTTAG+TGG - chr7_4:57109399-57109418 Msa1165270:intron 40.0%
TTTCAGTCACATGACAACAC+AGG + chr7_4:57109484-57109503 None:intergenic 40.0%
TGTGTTGTCATGTGACTGAA+AGG - chr7_4:57109483-57109502 Msa1165270:intron 40.0%
AACAGCCTCTTGTGTATAAC+AGG - chr7_4:57109526-57109545 Msa1165270:intron 40.0%
ACAGCCTCTTGTGTATAACA+GGG - chr7_4:57109527-57109546 Msa1165270:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr7_4:57109558-57109577 Msa1165270:intron 40.0%
CTAATTGTTAGCTCCATCCT+TGG - chr7_4:57109651-57109670 Msa1165270:intron 40.0%
AAGACTGGTAAAACCAAGGA+TGG + chr7_4:57109667-57109686 None:intergenic 40.0%
!! AAGATATGAAAGTGCCCAAC+AGG + chr7_4:57109844-57109863 None:intergenic 40.0%
ATTCAAGGCGTAATTGAAGC+TGG - chr7_4:57109885-57109904 Msa1165270:intron 40.0%
! CTGTTCAAAGTTGTTTCCCT+TGG - chr7_4:57109964-57109983 Msa1165270:intron 40.0%
GAATAAGCACAGAAGGAGAT+GGG + chr7_4:57110037-57110056 None:intergenic 40.0%
GAAACTGTGAAGGAGATAGT+GGG + chr7_4:57110392-57110411 None:intergenic 40.0%
AGAAACTGTGAAGGAGATAG+TGG + chr7_4:57110393-57110412 None:intergenic 40.0%
GAAATTTGTGCAATTGGACG+GGG + chr7_4:57110419-57110438 None:intergenic 40.0%
GGAAATTTGTGCAATTGGAC+GGG + chr7_4:57110420-57110439 None:intergenic 40.0%
TCATAAGGAGGAAAGAGACA+TGG + chr7_4:57110484-57110503 None:intergenic 40.0%
ATCAAGCACATGATTCGTGA+TGG + chr7_4:57110533-57110552 None:intergenic 40.0%
TAAGAGAAGGAAGAACTCGA+TGG + chr7_4:57110620-57110639 None:intergenic 40.0%
ACAATTTCGAACATCACAGC+TGG - chr7_4:57110693-57110712 Msa1165270:CDS 40.0%
CAATTTCGAACATCACAGCT+GGG - chr7_4:57110694-57110713 Msa1165270:CDS 40.0%
! ACAGATTCAGGTTTGTGCAT+TGG - chr7_4:57110725-57110744 Msa1165270:CDS 40.0%
! CAGATTCAGGTTTGTGCATT+GGG - chr7_4:57110726-57110745 Msa1165270:CDS 40.0%
TGCCAGTATAATTGGTCCTT+TGG - chr7_4:57110834-57110853 Msa1165270:intron 40.0%
GACCAAAGGACCAATTATAC+TGG + chr7_4:57110839-57110858 None:intergenic 40.0%
GGCAATCTCAAATGCTACAT+CGG - chr7_4:57110906-57110925 Msa1165270:CDS 40.0%
GCAATCTCAAATGCTACATC+GGG - chr7_4:57110907-57110926 Msa1165270:CDS 40.0%
CATGTGAGTAGATCACACAA+GGG + chr7_4:57111086-57111105 None:intergenic 40.0%
ACATGTGAGTAGATCACACA+AGG + chr7_4:57111087-57111106 None:intergenic 40.0%
AGACAAACTGTCACAATCCT+AGG + chr7_4:57111116-57111135 None:intergenic 40.0%
TGAAATGATTGACGAAGCTG+AGG - chr7_4:57111214-57111233 Msa1165270:intron 40.0%
GAAATGATTGACGAAGCTGA+GGG - chr7_4:57111215-57111234 Msa1165270:intron 40.0%
TGAAGATTCTCGAGACATAC+TGG - chr7_4:57111297-57111316 Msa1165270:intron 40.0%
TCTCAATCAGGGTTCAACTT+TGG - chr7_4:57111359-57111378 Msa1165270:intron 40.0%
ACAATACAGGATAACACGAG+AGG + chr7_4:57111528-57111547 None:intergenic 40.0%
!! TGTTCTTTAAGGTTCAGCCT+TGG - chr7_4:57111666-57111685 Msa1165270:intron 40.0%
AAGGTTCAGCCTTGGTAAAT+AGG - chr7_4:57111674-57111693 Msa1165270:intron 40.0%
!!! TGGCTGGTTTTACATACAAC+AGG - chr7_4:57111727-57111746 Msa1165270:CDS 40.0%
!!! GGCTGGTTTTACATACAACA+GGG - chr7_4:57111728-57111747 Msa1165270:CDS 40.0%
!!! GCTGGTTTTACATACAACAG+GGG - chr7_4:57111729-57111748 Msa1165270:CDS 40.0%
AGCGTACCACTTATGATTCT+AGG - chr7_4:57111898-57111917 Msa1165270:CDS 40.0%
ACAGGGTAAAAAAAACTCCG+AGG + chr7_4:57111978-57111997 None:intergenic 40.0%
GCAGGGTTGAAGAGTGAAAT+TGG + chr7_4:57107054-57107073 None:intergenic 45.0%
AGTGAAAGAGCGAAGCAGAA+AGG + chr7_4:57107122-57107141 None:intergenic 45.0%
TGGTTGAGATCCGGAAGAAT+CGG - chr7_4:57107317-57107336 Msa1165270:three_prime_UTR 45.0%
TTTCTTCCCTCCGATTCTTC+CGG + chr7_4:57107330-57107349 None:intergenic 45.0%
! GTAGGGGTGTGCATAAAAAC+TGG + chr7_4:57107751-57107770 None:intergenic 45.0%
CCCATCTGTATGTAGCTACA+AGG - chr7_4:57107891-57107910 Msa1165270:CDS 45.0%
AGTCCAGATTCCTGTAACCA+AGG + chr7_4:57107997-57108016 None:intergenic 45.0%
GTATAACCTCCTCAATCGGT+GGG + chr7_4:57108179-57108198 None:intergenic 45.0%
TGTATAACCTCCTCAATCGG+TGG + chr7_4:57108180-57108199 None:intergenic 45.0%
! TGTTGTAGTTTGAGGCAGCA+TGG - chr7_4:57108339-57108358 Msa1165270:intron 45.0%
! GTTGTAGTTTGAGGCAGCAT+GGG - chr7_4:57108340-57108359 Msa1165270:intron 45.0%
CATCATCACTAGGAGAAGCA+AGG + chr7_4:57108448-57108467 None:intergenic 45.0%
GATGGTCCAACACTATTGCA+AGG + chr7_4:57108803-57108822 None:intergenic 45.0%
AACATTTCCCAATGCCCACA+CGG + chr7_4:57108885-57108904 None:intergenic 45.0%
AGAACAAGATCACGGCATCT+AGG + chr7_4:57108920-57108939 None:intergenic 45.0%
AGATGCCGTGATCTTGTTCT+CGG - chr7_4:57108920-57108939 Msa1165270:intron 45.0%
CATGACCGAGAACAAGATCA+CGG + chr7_4:57108928-57108947 None:intergenic 45.0%
TCATTCAATTGCGCCAACAG+AGG + chr7_4:57108962-57108981 None:intergenic 45.0%
!! GAAGTTTGAGAGTGTCCATG+TGG + chr7_4:57109014-57109033 None:intergenic 45.0%
GACACTCTCAAACTTCTGCA+GGG - chr7_4:57109018-57109037 Msa1165270:intron 45.0%
ACACTCTCAAACTTCTGCAG+GGG - chr7_4:57109019-57109038 Msa1165270:intron 45.0%
ACCTGATCAAAAGCAGGTTG+TGG + chr7_4:57109049-57109068 None:intergenic 45.0%
! ATACACAAGAGGCTGTTTCC+AGG + chr7_4:57109523-57109542 None:intergenic 45.0%
CTTGCCCTGTTATACACAAG+AGG + chr7_4:57109534-57109553 None:intergenic 45.0%
CTCTTGTGTATAACAGGGCA+AGG - chr7_4:57109532-57109551 Msa1165270:intron 45.0%
GCTGCGTACAATACACCAAA+TGG - chr7_4:57109554-57109573 Msa1165270:intron 45.0%
GCGTACAATACACCAAATGG+TGG - chr7_4:57109557-57109576 Msa1165270:intron 45.0%
AGCATGAAAAAGGGACAACC+CGG + chr7_4:57109624-57109643 None:intergenic 45.0%
AGCTCTGCGAGCATGAAAAA+GGG + chr7_4:57109633-57109652 None:intergenic 45.0%
! TAGCTCTGCGAGCATGAAAA+AGG + chr7_4:57109634-57109653 None:intergenic 45.0%
TGCAGGTTTAACCTGTAAGC+AGG + chr7_4:57109766-57109785 None:intergenic 45.0%
AAGTCTTGACTGATGCCTGT+TGG - chr7_4:57109826-57109845 Msa1165270:intron 45.0%
AGTCTTGACTGATGCCTGTT+GGG - chr7_4:57109827-57109846 Msa1165270:intron 45.0%
ACAGTAGAAGCTCAACAAGC+CGG + chr7_4:57109920-57109939 None:intergenic 45.0%
! GCTTGTTGAGCTTCTACTGT+GGG - chr7_4:57109920-57109939 Msa1165270:intron 45.0%
GGAATAAGCACAGAAGGAGA+TGG + chr7_4:57110038-57110057 None:intergenic 45.0%
AGAGCAGGAATAAGCACAGA+AGG + chr7_4:57110044-57110063 None:intergenic 45.0%
! AACTAGCAGAGCTGATTCAC+CGG - chr7_4:57110314-57110333 Msa1165270:intron 45.0%
TGGTAGCTTAAGAACTGAGC+CGG + chr7_4:57110336-57110355 None:intergenic 45.0%
!! GTGAAGGAGATAGTGGGAAA+TGG + chr7_4:57110386-57110405 None:intergenic 45.0%
ACATGGCTGCAAGATATGAG+AGG + chr7_4:57110441-57110460 None:intergenic 45.0%
!! GTGTTAATGGGGTGCTTTTC+TGG - chr7_4:57110579-57110598 Msa1165270:intron 45.0%
TGGGAACAAGCAACAGATTC+AGG - chr7_4:57110713-57110732 Msa1165270:CDS 45.0%
ATATCAAGAAGGAAGCAGCC+TGG - chr7_4:57110884-57110903 Msa1165270:CDS 45.0%
TATCAAGAAGGAAGCAGCCT+GGG - chr7_4:57110885-57110904 Msa1165270:CDS 45.0%
! TGTAGCATTTGAGATTGCCC+AGG + chr7_4:57110905-57110924 None:intergenic 45.0%
ATCTCAAATGCTACATCGGG+TGG - chr7_4:57110910-57110929 Msa1165270:CDS 45.0%
! ATGTTCCCCGGTGATTTTGT+TGG - chr7_4:57110976-57110995 Msa1165270:intron 45.0%
AAAATTGGTCGACAGGTACC+TGG - chr7_4:57111040-57111059 Msa1165270:intron 45.0%
ACAGGTACCTGGTAAGTCAA+GGG - chr7_4:57111051-57111070 Msa1165270:intron 45.0%
TAATGCACCCTTGACTTACC+AGG + chr7_4:57111061-57111080 None:intergenic 45.0%
TACTCACATGTCCTGATCCT+AGG - chr7_4:57111096-57111115 Msa1165270:CDS 45.0%
ACTGTCACAATCCTAGGATC+AGG + chr7_4:57111110-57111129 None:intergenic 45.0%
GGGGAAGCTGATAAAAATGC+CGG - chr7_4:57111164-57111183 Msa1165270:intron 45.0%
AAAAATGCCGGCATCACTGA+TGG - chr7_4:57111176-57111195 Msa1165270:intron 45.0%
TCTCAGTGTTGTCATGACTC+TGG + chr7_4:57111262-57111281 None:intergenic 45.0%
GATTCTCGAGACATACTGGT+TGG - chr7_4:57111301-57111320 Msa1165270:intron 45.0%
CAGGTGATGCTTCTCAATCA+GGG - chr7_4:57111348-57111367 Msa1165270:intron 45.0%
CAATCAGGGTTCAACTTTGG+TGG - chr7_4:57111362-57111381 Msa1165270:intron 45.0%
!! TTTTAGCTGGTCCATCAGTG+AGG - chr7_4:57111583-57111602 Msa1165270:intron 45.0%
ATACTGGAGAACCTCACTGA+TGG + chr7_4:57111597-57111616 None:intergenic 45.0%
ATCAGTGAGGTTCTCCAGTA+TGG - chr7_4:57111596-57111615 Msa1165270:intron 45.0%
AGTATGGCAGTTCGACAGTT+GGG - chr7_4:57111612-57111631 Msa1165270:intron 45.0%
CAGTAACGGCCTATTTACCA+AGG + chr7_4:57111686-57111705 None:intergenic 45.0%
CTTGGTAAATAGGCCGTTAC+TGG - chr7_4:57111684-57111703 Msa1165270:intron 45.0%
TAAATAGGCCGTTACTGGAC+CGG - chr7_4:57111689-57111708 Msa1165270:intron 45.0%
!!! ACCGGCTTGGGTTTTTGAAA+TGG - chr7_4:57111707-57111726 Msa1165270:intron 45.0%
GCCATTTCAAAAACCCAAGC+CGG + chr7_4:57111711-57111730 None:intergenic 45.0%
!!! GCTTGGGTTTTTGAAATGGC+TGG - chr7_4:57111711-57111730 Msa1165270:intron 45.0%
ACATACAACAGGGGAACAGT+TGG - chr7_4:57111738-57111757 Msa1165270:CDS 45.0%
CATACAACAGGGGAACAGTT+GGG - chr7_4:57111739-57111758 Msa1165270:CDS 45.0%
GAGTGAGGGTTTGGAAAGAG+AGG + chr7_4:57107100-57107119 None:intergenic 50.0%
AGCAGAAAGGAGTGAGGGTT+TGG + chr7_4:57107109-57107128 None:intergenic 50.0%
AGCGAAGCAGAAAGGAGTGA+GGG + chr7_4:57107114-57107133 None:intergenic 50.0%
!! GTATCGATTCCGACGAACCT+CGG + chr7_4:57107248-57107267 None:intergenic 50.0%
GGTTCGTCGGAATCGATACA+AGG - chr7_4:57107249-57107268 Msa1165270:three_prime_UTR 50.0%
TCGTCGGAATCGATACAAGG+TGG - chr7_4:57107252-57107271 Msa1165270:three_prime_UTR 50.0%
TCGGAATCGATACAAGGTGG+CGG - chr7_4:57107255-57107274 Msa1165270:three_prime_UTR 50.0%
! ATACAAGGTGGCGGTTGATG+CGG - chr7_4:57107264-57107283 Msa1165270:three_prime_UTR 50.0%
GAGACGGAGAGAGGATAACT+TGG - chr7_4:57107297-57107316 Msa1165270:three_prime_UTR 50.0%
TTGAGATCCGGAAGAATCGG+AGG - chr7_4:57107320-57107339 Msa1165270:three_prime_UTR 50.0%
TGAGATCCGGAAGAATCGGA+GGG - chr7_4:57107321-57107340 Msa1165270:three_prime_UTR 50.0%
! TTGCAGAAGAAGAGGCGTGA+AGG - chr7_4:57107352-57107371 Msa1165270:three_prime_UTR 50.0%
TTCCTGTAACCAAGGCTGGT+AGG + chr7_4:57107989-57108008 None:intergenic 50.0%
CAGATTCCTGTAACCAAGGC+TGG + chr7_4:57107993-57108012 None:intergenic 50.0%
CAGCCTTGGTTACAGGAATC+TGG - chr7_4:57107991-57108010 Msa1165270:CDS 50.0%
! GGAAGATTTTCCACAGCTGC+AGG - chr7_4:57108239-57108258 Msa1165270:CDS 50.0%
!! TGGGCATTGGGAAATGTTGC+TGG - chr7_4:57108887-57108906 Msa1165270:intron 50.0%
CGTGATCTTGTTCTCGGTCA+TGG - chr7_4:57108926-57108945 Msa1165270:intron 50.0%
TGGAGCTTTGCTTCCTCTGT+TGG - chr7_4:57108946-57108965 Msa1165270:intron 50.0%
CTATGCTCAGAAACGCCACA+TGG - chr7_4:57108996-57109015 Msa1165270:intron 50.0%
GGACACTCTCAAACTTCTGC+AGG - chr7_4:57109017-57109036 Msa1165270:intron 50.0%
!! GCCACAACCTGCTTTTGATC+AGG - chr7_4:57109045-57109064 Msa1165270:CDS 50.0%
AAGGTCACGTGTTCAAGTCC+TGG - chr7_4:57109502-57109521 Msa1165270:intron 50.0%
TAACCTGTAAGCAGGCAGGA+TGG + chr7_4:57109758-57109777 None:intergenic 50.0%
GGTTTAACCTGTAAGCAGGC+AGG + chr7_4:57109762-57109781 None:intergenic 50.0%
TTGAAGCTGGTGTCTGTAGC+CGG - chr7_4:57109898-57109917 Msa1165270:intron 50.0%
!! GGCTTGTTGAGCTTCTACTG+TGG - chr7_4:57109919-57109938 Msa1165270:intron 50.0%
TAAGCACAGAAGGAGATGGG+TGG + chr7_4:57110034-57110053 None:intergenic 50.0%
ATTCCTGCTCTACGCACAGT+TGG - chr7_4:57110053-57110072 Msa1165270:intron 50.0%
TTTCCAACTGTGCGTAGAGC+AGG + chr7_4:57110059-57110078 None:intergenic 50.0%
! TGGAGATGACTTGCAGACAC+AGG - chr7_4:57110088-57110107 Msa1165270:CDS 50.0%
GCATGGAGGAAATCGTCTGT+AGG - chr7_4:57110235-57110254 Msa1165270:CDS 50.0%
ACGGGGCATAGAAACTGTGA+AGG + chr7_4:57110402-57110421 None:intergenic 50.0%
!! CTCGATGGTTGATGATGACC+TGG + chr7_4:57110605-57110624 None:intergenic 50.0%
GCATCAAGAAGGAAGCTTGC+TGG - chr7_4:57110670-57110689 Msa1165270:CDS 50.0%
GACAGGTACCTGGTAAGTCA+AGG - chr7_4:57111050-57111069 Msa1165270:intron 50.0%
ATTCACGCCATCAGTGATGC+CGG + chr7_4:57111186-57111205 None:intergenic 50.0%
! GCATCACTGATGGCGTGAAT+CGG - chr7_4:57111186-57111205 Msa1165270:intron 50.0%
GATTGACGAAGCTGAGGGTT+TGG - chr7_4:57111220-57111239 Msa1165270:intron 50.0%
CAGTGTTGTCATGACTCTGG+AGG + chr7_4:57111259-57111278 None:intergenic 50.0%
! TCTCGAGACATACTGGTTGG+AGG - chr7_4:57111304-57111323 Msa1165270:intron 50.0%
!! GATTGAGAAGCATCACCTGG+AGG + chr7_4:57111347-57111366 None:intergenic 50.0%
!! CCTGATTGAGAAGCATCACC+TGG + chr7_4:57111350-57111369 None:intergenic 50.0%
CCAGGTGATGCTTCTCAATC+AGG - chr7_4:57111347-57111366 Msa1165270:intron 50.0%
GTTGAATCCACCAGAAGGCA+CGG + chr7_4:57111402-57111421 None:intergenic 50.0%
CAACTGTCGAACTGCCATAC+TGG + chr7_4:57111613-57111632 None:intergenic 50.0%
CAGTATGGCAGTTCGACAGT+TGG - chr7_4:57111611-57111630 Msa1165270:intron 50.0%
GTATGGCAGTTCGACAGTTG+GGG - chr7_4:57111613-57111632 Msa1165270:intron 50.0%
TATGGCAGTTCGACAGTTGG+GGG - chr7_4:57111614-57111633 Msa1165270:intron 50.0%
TCGGAAGTGGCAAGAAAAGC+CGG + chr7_4:57111771-57111790 None:intergenic 50.0%
GAGCGAAGCAGAAAGGAGTG+AGG + chr7_4:57107115-57107134 None:intergenic 55.0%
TCGGTTCTCGCGTTTGCGTT+AGG + chr7_4:57107229-57107248 None:intergenic 55.0%
TAACGCAAACGCGAGAACCG+AGG - chr7_4:57107228-57107247 Msa1165270:three_prime_UTR 55.0%
! CGGTTGATGCGGAAGAAGGT+CGG - chr7_4:57107275-57107294 Msa1165270:three_prime_UTR 55.0%
ATGCGGAAGAAGGTCGGAGA+CGG - chr7_4:57107281-57107300 Msa1165270:three_prime_UTR 55.0%
ACTGATGCAGGCATCTGCTG+AGG + chr7_4:57107385-57107404 None:intergenic 55.0%
GTTGGAACACCTACCAGCCT+TGG - chr7_4:57107977-57107996 Msa1165270:CDS 55.0%
CACCTACCAGCCTTGGTTAC+AGG - chr7_4:57107984-57108003 Msa1165270:CDS 55.0%
!! TCAATCGGTGGGCTACGTTC+TGG + chr7_4:57108168-57108187 None:intergenic 55.0%
! AGAACGTAGCCCACCGATTG+AGG - chr7_4:57108167-57108186 Msa1165270:intron 55.0%
CCTGACAGTCCACACAACAC+AGG + chr7_4:57108862-57108881 None:intergenic 55.0%
! CCTGTGTTGTGTGGACTGTC+AGG - chr7_4:57108859-57108878 Msa1165270:intron 55.0%
CTTGAGCTCCCGCATATGCA+GGG + chr7_4:57109597-57109616 None:intergenic 55.0%
ACTTGAGCTCCCGCATATGC+AGG + chr7_4:57109598-57109617 None:intergenic 55.0%
CTACCATCCTGCCTGCTTAC+AGG - chr7_4:57109752-57109771 Msa1165270:intron 55.0%
TGGATGAGACTGGCAAGTGC+AGG + chr7_4:57109792-57109811 None:intergenic 55.0%
!! AATGGGGTGCTTTTCTGGCC+AGG - chr7_4:57110584-57110603 Msa1165270:intron 55.0%
CTGGTTGGAGGAAGATGACG+AGG - chr7_4:57111316-57111335 Msa1165270:intron 55.0%
! AGAAGGCACGGCAGGAACAT+CGG + chr7_4:57111390-57111409 None:intergenic 55.0%
ATGGCAGTTCGACAGTTGGG+GGG - chr7_4:57111615-57111634 Msa1165270:intron 55.0%
AACCCAAGCCGGTCCAGTAA+CGG + chr7_4:57111700-57111719 None:intergenic 55.0%
! ACAGGGGAACAGTTGGGTTG+TGG - chr7_4:57111745-57111764 Msa1165270:CDS 55.0%
!! ACGCTGACTCCAACCTTAGC+AGG + chr7_4:57111883-57111902 None:intergenic 55.0%
ACGCGAGAACCGAGGTTCGT+CGG - chr7_4:57107236-57107255 Msa1165270:three_prime_UTR 60.0%
! GTGGCGGTTGATGCGGAAGA+AGG - chr7_4:57107271-57107290 Msa1165270:three_prime_UTR 60.0%
AGAAGGTCGGAGACGGAGAG+AGG - chr7_4:57107288-57107307 Msa1165270:three_prime_UTR 60.0%
! ACGTAGCCCACCGATTGAGG+AGG - chr7_4:57108170-57108189 Msa1165270:intron 60.0%
! TGTGGACTGTCAGGCCGTGT+GGG - chr7_4:57108868-57108887 Msa1165270:intron 60.0%
TGTCAGGCCGTGTGGGCATT+GGG - chr7_4:57108875-57108894 Msa1165270:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr7_4:57109570-57109589 Msa1165270:intron 60.0%
CATATGCAGGGTCCGGGAAG+GGG + chr7_4:57109585-57109604 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr7_4:57109586-57109605 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr7_4:57109585-57109604 Msa1165270:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr7_4:57109586-57109605 Msa1165270:intron 60.0%
ATGCGGGAGCTCAAGTGCAC+CGG - chr7_4:57109602-57109621 Msa1165270:intron 60.0%
! CTGGCAAGTGCAGGAAGTGC+AGG + chr7_4:57109783-57109802 None:intergenic 60.0%
GATGACGAGGCTATGCCTCC+AGG - chr7_4:57111329-57111348 Msa1165270:intron 60.0%
GATGTTCCTGCCGTGCCTTC+TGG - chr7_4:57111389-57111408 Msa1165270:intron 60.0%
! AATCCACCAGAAGGCACGGC+AGG + chr7_4:57111398-57111417 None:intergenic 60.0%
! GGGAACAGTTGGGTTGTGGC+CGG - chr7_4:57111749-57111768 Msa1165270:CDS 60.0%
! GTGTGGACTGTCAGGCCGTG+TGG - chr7_4:57108867-57108886 Msa1165270:intron 65.0%
CTGTCAGGCCGTGTGGGCAT+TGG - chr7_4:57108874-57108893 Msa1165270:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr7_4:57109572-57109591 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr7_4:57109587-57109606 None:intergenic 65.0%
CTCCCGCATATGCAGGGTCC+GGG + chr7_4:57109591-57109610 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG + chr7_4:57109592-57109611 None:intergenic 65.0%
TGCGGGAGCTCAAGTGCACC+GGG - chr7_4:57109603-57109622 Msa1165270:intron 65.0%
GTTCCTGCCGTGCCTTCTGG+TGG - chr7_4:57111392-57111411 Msa1165270:intron 65.0%
AGGCCGTTACTGGACCGGCT+TGG - chr7_4:57111694-57111713 Msa1165270:intron 65.0%
! GGCCGTTACTGGACCGGCTT+GGG - chr7_4:57111695-57111714 Msa1165270:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 57107015 57112127 57107015 ID=Msa1165270;Name=Msa1165270
chr7_4 mRNA 57107015 57112127 57107015 ID=Msa1165270-mRNA-1;Parent=Msa1165270;Name=Msa1165270-mRNA-1;_AED=0.07;_eAED=0.07;_QI=199|1|1|1|0.9|0.81|11|570|532
chr7_4 exon 57107015 57107562 57107015 ID=Msa1165270-mRNA-1:exon:17223;Parent=Msa1165270-mRNA-1
chr7_4 exon 57107690 57108087 57107690 ID=Msa1165270-mRNA-1:exon:17222;Parent=Msa1165270-mRNA-1
chr7_4 exon 57108192 57108319 57108192 ID=Msa1165270-mRNA-1:exon:17221;Parent=Msa1165270-mRNA-1
chr7_4 exon 57108408 57108536 57108408 ID=Msa1165270-mRNA-1:exon:17220;Parent=Msa1165270-mRNA-1
chr7_4 exon 57109033 57109111 57109033 ID=Msa1165270-mRNA-1:exon:17219;Parent=Msa1165270-mRNA-1
chr7_4 exon 57109205 57109368 57109205 ID=Msa1165270-mRNA-1:exon:17218;Parent=Msa1165270-mRNA-1
chr7_4 exon 57110076 57110261 57110076 ID=Msa1165270-mRNA-1:exon:17217;Parent=Msa1165270-mRNA-1
chr7_4 exon 57110664 57110795 57110664 ID=Msa1165270-mRNA-1:exon:17216;Parent=Msa1165270-mRNA-1
chr7_4 exon 57110882 57110973 57110882 ID=Msa1165270-mRNA-1:exon:17215;Parent=Msa1165270-mRNA-1
chr7_4 exon 57111068 57111164 57111068 ID=Msa1165270-mRNA-1:exon:17214;Parent=Msa1165270-mRNA-1
chr7_4 exon 57111713 57112127 57111713 ID=Msa1165270-mRNA-1:exon:17213;Parent=Msa1165270-mRNA-1
chr7_4 five_prime_UTR 57111929 57112127 57111929 ID=Msa1165270-mRNA-1:five_prime_utr;Parent=Msa1165270-mRNA-1
chr7_4 CDS 57111713 57111928 57111713 ID=Msa1165270-mRNA-1:cds;Parent=Msa1165270-mRNA-1
chr7_4 CDS 57111068 57111164 57111068 ID=Msa1165270-mRNA-1:cds;Parent=Msa1165270-mRNA-1
chr7_4 CDS 57110882 57110973 57110882 ID=Msa1165270-mRNA-1:cds;Parent=Msa1165270-mRNA-1
chr7_4 CDS 57110664 57110795 57110664 ID=Msa1165270-mRNA-1:cds;Parent=Msa1165270-mRNA-1
chr7_4 CDS 57110076 57110261 57110076 ID=Msa1165270-mRNA-1:cds;Parent=Msa1165270-mRNA-1
chr7_4 CDS 57109205 57109368 57109205 ID=Msa1165270-mRNA-1:cds;Parent=Msa1165270-mRNA-1
chr7_4 CDS 57109033 57109111 57109033 ID=Msa1165270-mRNA-1:cds;Parent=Msa1165270-mRNA-1
chr7_4 CDS 57108408 57108536 57108408 ID=Msa1165270-mRNA-1:cds;Parent=Msa1165270-mRNA-1
chr7_4 CDS 57108192 57108319 57108192 ID=Msa1165270-mRNA-1:cds;Parent=Msa1165270-mRNA-1
chr7_4 CDS 57107712 57108087 57107712 ID=Msa1165270-mRNA-1:cds;Parent=Msa1165270-mRNA-1
chr7_4 three_prime_UTR 57107690 57107711 57107690 ID=Msa1165270-mRNA-1:three_prime_utr;Parent=Msa1165270-mRNA-1
chr7_4 three_prime_UTR 57107015 57107562 57107015 ID=Msa1165270-mRNA-1:three_prime_utr;Parent=Msa1165270-mRNA-1
Gene Sequence

>Msa1165270

ATGTCGTATCGTCCTAACGCAAACGCGAGAACCGAGGTTCGTCGGAATCGATACAAGGTGGCGGTTGATGCGGAAGAAGGTCGGAGACGGAGAGAGGATAACTTGGTTGAGATCCGGAAGAATCGGAGGGAAGAAAGCTTGCAGAAGAAGAGGCGTGAAGGACTTCAACCTCAGCAGATGCCTGCATCAGTTCAATCTAATCTACTCGAGAAAAAGTTGGAACACCTACCAGCCTTGGTTACAGGAATCTGGACTGATGATAATAACATGCAGTTTGAGGCAACAACTCAGTTTCGGAAGTTGCTTTCAATTGAACGTAGCCCACCGATTGAGGAGGTTATACAAGCTGGTGTAGTTCCTCGTTTTATTGAGTTCTTGATGAGGGAAGATTTTCCACAGCTGCAGTTTGAGGCAGCATGGGCTTTGACAAATATAGCTTCTGGAACATCTGAAAACACTAAGGTAGTAATTGAGGCAGGTGCTGTACCAATTTTTGTGAAGCTCCTTGCTTCTCCTAGTGATGATGTTCGTGAACAGGCCGTGTGGGCATTGGGAAATGTTGCTGGAGATTCACCTAGATGCCGTGATCTTGTTCTCGGTCATGGAGCTTTGCTTCCTCTGTTGGCGCAATTGAATGAGCATGCCAAACTTTCTATGCTCAGAAACGCCACATGGACACTCTCAAACTTCTGCAGGGGAAAGCCACAACCTGCTTTTGATCAGGTTAAACCTGCACTTCCTGCACTTGCCAGTCTCATCCATTCAAATGATGAAGAAGTCTTGACTGATGCCTGTTGGGCACTTTCATATCTTTCTGATGGTGCAAATGACAAAATTCAAGGCGTAATTGAAGCTGGTGTCTGTAGCCGGCTTGTTGAGCTTCTACTCCACCCATCTCCTTCTGTGCTTATTCCTGCTCTACGCACAGTTGGAAATATTGTCACTGGAGATGACTTGCAGACACAGGTCATCATCAACCATCGAGTTCTTCCTTCTCTTAAGAACCTCTTGATTAATAGTTATAAAAAAAGCATCAAGAAGGAAGCTTGCTGGACAATTTCGAACATCACAGCTGGGAACAAGCAACAGATTCAGGATGTGATTGATGCCAGTATAATTGGTCCTTTGGTCAACTTGCTTCAAAATGCTGAGTTTGATATCAAGAAGGAAGCAGCCTGGGCAATCTCAAATGCTACATCGGGTGGATCTCATGAACAACTCAAGTACCTGGTAAGTCAAGGGTGCATTAAGCCCTTGTGTGATCTACTCACATGTCCTGATCCTAGGATTGTGACAGTTTGTCTTGAAGGGCTTGAAAACATCTTAAAGGTAGGGGAAGCTGATAAAAATGCCGGCATCACTGATGGCGTGAATCGGTATGCTGAAATGATTGACGAAGCTGAGGGTTTGGAGAAAATTGAGAACCTCCAGAGTCATGACAACACTGAGATTTATGAAAAGGCTGTGAAGATTCTCGAGACATACTGGTTGGAGGAAGATGACGAGGCTATGCCTCCAGGTGATGCTTCTCAATCAGGGTTCAACTTTGGTGGCTCCGATGTTCCTGCCGTGCCTTCTGGTGGATTCAACTTTAACTAG
Protein sequence

>Msa1165270

MSYRPNANARTEVRRNRYKVAVDAEEGRRRREDNLVEIRKNRREESLQKKRREGLQPQQMPASVQSNLLEKKLEHLPALVTGIWTDDNNMQFEATTQFRKLLSIERSPPIEEVIQAGVVPRFIEFLMREDFPQLQFEAAWALTNIASGTSENTKVVIEAGAVPIFVKLLASPSDDVREQAVWALGNVAGDSPRCRDLVLGHGALLPLLAQLNEHAKLSMLRNATWTLSNFCRGKPQPAFDQVKPALPALASLIHSNDEEVLTDACWALSYLSDGANDKIQGVIEAGVCSRLVELLLHPSPSVLIPALRTVGNIVTGDDLQTQVIINHRVLPSLKNLLINSYKKSIKKEACWTISNITAGNKQQIQDVIDASIIGPLVNLLQNAEFDIKKEAAWAISNATSGGSHEQLKYLVSQGCIKPLCDLLTCPDPRIVTVCLEGLENILKVGEADKNAGITDGVNRYAEMIDEAEGLEKIENLQSHDNTEIYEKAVKILETYWLEEDDEAMPPGDASQSGFNFGGSDVPAVPSGGFNFN*