Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235610 | XP_013444510.1 | 97.207 | 358 | 6 | 1 | 1 | 358 | 1 | 354 | 0.0 | 713 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235610 | sp|Q7TND5|RPF1_MOUSE | 50.154 | 325 | 133 | 5 | 36 | 358 | 52 | 349 | 1.27e-95 | 291 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235610 | A0A072TYA8 | 97.207 | 358 | 6 | 1 | 1 | 358 | 1 | 354 | 0.0 | 713 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0024930 | Msa1235610 | 0.800944 | 1.136269e-48 | -8.615850e-47 |
Msa0032810 | Msa1235610 | 0.816633 | 5.000536e-52 | -8.615850e-47 |
Msa0615580 | Msa1235610 | 0.832711 | 8.086670e-56 | -8.615850e-47 |
Msa0656410 | Msa1235610 | 0.841425 | 4.790627e-58 | -8.615850e-47 |
Msa0712860 | Msa1235610 | 0.808527 | 2.964130e-50 | -8.615850e-47 |
Msa0766080 | Msa1235610 | 0.821308 | 4.325738e-53 | -8.615850e-47 |
Msa0120880 | Msa1235610 | 0.821903 | 3.152215e-53 | -8.615850e-47 |
Msa0172930 | Msa1235610 | 0.819673 | 1.026246e-52 | -8.615850e-47 |
Msa0218720 | Msa1235610 | 0.840091 | 1.071622e-57 | -8.615850e-47 |
Msa0230520 | Msa1235610 | 0.801104 | 1.054061e-48 | -8.615850e-47 |
Msa1235610 | Msa1275680 | 0.822084 | 2.861936e-53 | -8.615850e-47 |
Msa1235610 | Msa1277260 | 0.850999 | 1.180890e-60 | -8.615850e-47 |
Msa1235610 | Msa1300620 | 0.808234 | 3.423638e-50 | -8.615850e-47 |
Msa1235610 | Msa1315890 | 0.844574 | 6.948280e-59 | -8.615850e-47 |
Msa1235610 | Msa1329730 | 0.851560 | 8.194603e-61 | -8.615850e-47 |
Msa1235610 | Msa1329750 | 0.845882 | 3.078518e-59 | -8.615850e-47 |
Msa1235610 | Msa1385720 | 0.818092 | 2.348010e-52 | -8.615850e-47 |
Msa1235610 | Msa1434090 | 0.818493 | 1.904316e-52 | -8.615850e-47 |
Msa0377820 | Msa1235610 | 0.801926 | 7.148556e-49 | -8.615850e-47 |
Msa0437020 | Msa1235610 | 0.838842 | 2.260888e-57 | -8.615850e-47 |
Msa0472930 | Msa1235610 | 0.802668 | 5.029070e-49 | -8.615850e-47 |
Msa0992550 | Msa1235610 | 0.815463 | 9.126390e-52 | -8.615850e-47 |
Msa1089220 | Msa1235610 | 0.819645 | 1.041994e-52 | -8.615850e-47 |
Msa0265250 | Msa1235610 | 0.808753 | 2.653012e-50 | -8.615850e-47 |
Msa0295250 | Msa1235610 | 0.814614 | 1.408323e-51 | -8.615850e-47 |
Msa0355680 | Msa1235610 | 0.809694 | 1.667525e-50 | -8.615850e-47 |
Msa1123770 | Msa1235610 | 0.819492 | 1.128861e-52 | -8.615850e-47 |
Msa1169910 | Msa1235610 | 0.814234 | 1.709254e-51 | -8.615850e-47 |
Msa1195300 | Msa1235610 | 0.805933 | 1.050891e-49 | -8.615850e-47 |
Msa0958000 | Msa1235610 | 0.803522 | 3.348665e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235610 | MtrunA17_Chr8g0345651 | 97.207 | 358 | 6 | 1 | 1 | 358 | 1 | 354 | 0.0 | 713 |
Msa1235610 | MtrunA17_Chr3g0084381 | 33.562 | 292 | 141 | 7 | 70 | 358 | 50 | 291 | 5.08e-43 | 150 |
Msa1235610 | MtrunA17_Chr1g0176411 | 80.357 | 56 | 11 | 0 | 40 | 95 | 1 | 56 | 3.56e-20 | 83.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1235610 | AT4G01560.1 | 73.669 | 357 | 79 | 4 | 3 | 358 | 1 | 343 | 0.0 | 528 |
Msa1235610 | AT1G63780.1 | 38.776 | 245 | 122 | 6 | 117 | 358 | 73 | 292 | 9.07e-46 | 158 |
Find 85 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAGATGCTCTCTTGATTAT+TGG | 0.136869 | 8_2:-13726050 | Msa1235610:intron |
CTTCGACTTGTGTCCATTTC+CGG | 0.170540 | 8_2:+13723776 | None:intergenic |
TGTCTTGGAACTTTGCATTT+TGG | 0.220254 | 8_2:-13723734 | Msa1235610:three_prime_UTR |
CCCCAAGATCCCGAGTTTAA+AGG | 0.228228 | 8_2:-13725111 | Msa1235610:CDS |
CCCTTTAAACTCGGGATCTT+GGG | 0.260886 | 8_2:+13725110 | None:intergenic |
TTCCGTTTCTGTTTCCGTTC+TGG | 0.284839 | 8_2:+13729337 | None:intergenic |
CAGCTGGAACTTGGTTAATC+TGG | 0.296287 | 8_2:-13723702 | Msa1235610:three_prime_UTR |
TAAAACAATTGCCCGTCTTC+AGG | 0.332177 | 8_2:-13724860 | Msa1235610:intron |
GCAAGTGGTGATTAATATCT+TGG | 0.337449 | 8_2:+13726625 | None:intergenic |
CCCAAGATCCCGAGTTTAAA+GGG | 0.343368 | 8_2:-13725110 | Msa1235610:CDS |
ATTTGTTTGCAGCTATTTGC+TGG | 0.345769 | 8_2:-13726695 | Msa1235610:intron |
TGTTGAATATGCAAATAAAA+AGG | 0.345995 | 8_2:-13726206 | Msa1235610:CDS |
TTTAATATCAGAATTGCTTC+AGG | 0.350037 | 8_2:-13726377 | Msa1235610:CDS |
GCCCTTTAAACTCGGGATCT+TGG | 0.353403 | 8_2:+13725109 | None:intergenic |
AAATGAGCAGTAGGTCCTTC+AGG | 0.362193 | 8_2:+13726023 | None:intergenic |
CTCTTGAAGTAATGTGCATT+TGG | 0.364971 | 8_2:+13726349 | None:intergenic |
TTTCCACCGATCGCCATTGT+AGG | 0.381132 | 8_2:+13729413 | None:intergenic |
AACTCAACCTCTTCATCATC+AGG | 0.420118 | 8_2:+13728999 | None:intergenic |
TGTGTCCCCTTGCAGAATCA+TGG | 0.442254 | 8_2:-13725550 | Msa1235610:intron |
TAATCATCGAAGGACGGAAC+GGG | 0.458251 | 8_2:+13729306 | None:intergenic |
ACTGCATTTCAGCTGGAACT+TGG | 0.475547 | 8_2:-13723711 | Msa1235610:three_prime_UTR |
AGCTCAGGCTGGTGACTGGT+TGG | 0.478829 | 8_2:+13725523 | None:intergenic |
CACTTGCCGCTTCAATTCTA+CGG | 0.479733 | 8_2:-13726609 | Msa1235610:intron |
GCTCAGGCTGGTGACTGGTT+GGG | 0.480294 | 8_2:+13725524 | None:intergenic |
GTCTTCGGCACCTTCTTCTC+CGG | 0.480606 | 8_2:+13729062 | None:intergenic |
TGTCAAATGTTCCATGCTGC+AGG | 0.481553 | 8_2:+13723948 | None:intergenic |
ATATGAAGTCTCTCTGGTTG+TGG | 0.489756 | 8_2:+13725070 | None:intergenic |
AACCAGAACGGAAACAGAAA+CGG | 0.491238 | 8_2:-13729339 | Msa1235610:CDS |
AGAGAGACTTCATATTCTTC+CGG | 0.494821 | 8_2:-13725062 | Msa1235610:CDS |
CGAAGACGATTGAAAATACA+AGG | 0.499632 | 8_2:-13729046 | Msa1235610:CDS |
TACACGTCGCCCTTTAAACT+CGG | 0.500125 | 8_2:+13725101 | None:intergenic |
CACAAGCTCAGGCTGGTGAC+TGG | 0.500662 | 8_2:+13725519 | None:intergenic |
CAAGTGGTGATTAATATCTT+GGG | 0.501651 | 8_2:+13726626 | None:intergenic |
CTTCTTCTGATGCTTAAGCT+TGG | 0.508564 | 8_2:+13729253 | None:intergenic |
AAGTTGTTCAACACAAGCTC+AGG | 0.513960 | 8_2:+13725508 | None:intergenic |
GTTGTAGCCTCCGGAGAAGA+AGG | 0.514510 | 8_2:-13729072 | Msa1235610:intron |
TTGATTATTGGCTTACCTGA+AGG | 0.520117 | 8_2:-13726038 | Msa1235610:CDS |
TCATATTCTTCCGGCATCAT+CGG | 0.521685 | 8_2:-13725053 | Msa1235610:intron |
GGAAGAATATGAAGTCTCTC+TGG | 0.523080 | 8_2:+13725064 | None:intergenic |
CCTACTTGGTTCCCTACGAT+TGG | 0.527299 | 8_2:+13726156 | None:intergenic |
AGCAATTCTGATATTAAAGC+AGG | 0.533676 | 8_2:+13726382 | None:intergenic |
CCTTTAAACTCGGGATCTTG+GGG | 0.541308 | 8_2:+13725111 | None:intergenic |
AACAACTTCACAACACGCCT+AGG | 0.543084 | 8_2:-13725493 | Msa1235610:CDS |
TCTTTGTTCTTAATCATCGA+AGG | 0.545212 | 8_2:+13729296 | None:intergenic |
GGAACATTTGACACTAAAAG+TGG | 0.547527 | 8_2:-13723938 | Msa1235610:CDS |
CTAAAAGTGGAGAATATGAG+TGG | 0.547620 | 8_2:-13723925 | Msa1235610:CDS |
ATTGACACCAACCTGAAGAC+GGG | 0.550528 | 8_2:+13724849 | None:intergenic |
CGCGGTGGTTATTCCTACAA+TGG | 0.565034 | 8_2:-13729426 | Msa1235610:exon |
CAATGGCGATCGGTGGAAAG+AGG | 0.566083 | 8_2:-13729409 | Msa1235610:CDS |
TTAATCATCGAAGGACGGAA+CGG | 0.568387 | 8_2:+13729305 | None:intergenic |
GTGAGTTTGAAATGAGCAGT+AGG | 0.571962 | 8_2:+13726014 | None:intergenic |
AAGTTCCAAGACAAGGTCAC+AGG | 0.582687 | 8_2:+13723744 | None:intergenic |
TAGGAATAACCACCGCGCGA+GGG | 0.584404 | 8_2:+13729432 | None:intergenic |
AAGAATTGTACCGATGATGC+CGG | 0.586114 | 8_2:+13725043 | None:intergenic |
GTTAAAAGAGCTATTGAGCT+CGG | 0.586757 | 8_2:-13729191 | Msa1235610:CDS |
AATTGACACCAACCTGAAGA+CGG | 0.586946 | 8_2:+13724848 | None:intergenic |
TGTTCTTAATCATCGAAGGA+CGG | 0.587385 | 8_2:+13729300 | None:intergenic |
TTGCAAGCCTGATGATGAAG+AGG | 0.594460 | 8_2:-13729006 | Msa1235610:intron |
GAAGTCTCTCTGGTTGTGGA+AGG | 0.594781 | 8_2:+13725074 | None:intergenic |
TGTTCAACACAAGCTCAGGC+TGG | 0.595435 | 8_2:+13725512 | None:intergenic |
AATTCAGTTCAATATTAAAG+CGG | 0.596200 | 8_2:-13726658 | Msa1235610:CDS |
AGAATATGAGTGGGTTCACA+AGG | 0.597660 | 8_2:-13723915 | Msa1235610:intron |
GGAAACAGAAACGGAAACGA+AGG | 0.598065 | 8_2:-13729330 | Msa1235610:CDS |
TTCGGCACCTTCTTCTCCGG+AGG | 0.599893 | 8_2:+13729065 | None:intergenic |
TAGTTGTACACACCAATCGT+AGG | 0.607640 | 8_2:-13726168 | Msa1235610:CDS |
GCCTAGGGCATCGTGTTGGA+AGG | 0.608210 | 8_2:-13725477 | Msa1235610:intron |
CGTAGAATTGAAGCGGCAAG+TGG | 0.609118 | 8_2:+13726610 | None:intergenic |
GTTATTCCTACAATGGCGAT+CGG | 0.609248 | 8_2:-13729419 | Msa1235610:exon |
AGCTATTGAGCTCGGCGAAG+AGG | 0.611918 | 8_2:-13729183 | Msa1235610:intron |
ACCTTCCAACACGATGCCCT+AGG | 0.613726 | 8_2:+13725476 | None:intergenic |
AACATACCGTAGAATTGAAG+CGG | 0.614066 | 8_2:+13726603 | None:intergenic |
TTAACTTCAATGTGAAACGA+GGG | 0.623098 | 8_2:+13723975 | None:intergenic |
ACACGTCGCCCTTTAAACTC+GGG | 0.626716 | 8_2:+13725102 | None:intergenic |
CGGAAATGGACACAAGTCGA+AGG | 0.626913 | 8_2:-13723775 | Msa1235610:CDS |
ACAACTTCACAACACGCCTA+GGG | 0.637320 | 8_2:-13725492 | Msa1235610:CDS |
ACACGCCTAGGGCATCGTGT+TGG | 0.640776 | 8_2:-13725481 | Msa1235610:CDS |
AGTTGTACACACCAATCGTA+GGG | 0.643789 | 8_2:-13726167 | Msa1235610:CDS |
ATTCCTACAATGGCGATCGG+TGG | 0.646182 | 8_2:-13729416 | Msa1235610:exon |
AATGCACATTACTTCAAGAG+AGG | 0.646448 | 8_2:-13726346 | Msa1235610:CDS |
AAGCGCAACAATGATTCAGA+CGG | 0.648847 | 8_2:-13729386 | Msa1235610:CDS |
AAATGCAAAGTTCCAAGACA+AGG | 0.656551 | 8_2:+13723737 | None:intergenic |
TAAAAGTGGAGAATATGAGT+GGG | 0.666851 | 8_2:-13723924 | Msa1235610:CDS |
AAATGGACACAAGTCGAAGG+AGG | 0.670517 | 8_2:-13723772 | Msa1235610:CDS |
TTTAACTTCAATGTGAAACG+AGG | 0.679925 | 8_2:+13723974 | None:intergenic |
GAAGACGATTGAAAATACAA+GGG | 0.727075 | 8_2:-13729045 | Msa1235610:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATATTTGTTATAATGAAAAA+TGG | + | chr8_2:13727851-13727870 | None:intergenic | 10.0% |
!!! | AGAATATATATTTTGGTTAT+TGG | - | chr8_2:13724188-13724207 | Msa1235610:intron | 15.0% |
!! | TTTAGATAATTAGAAAATGA+TGG | - | chr8_2:13724399-13724418 | Msa1235610:intron | 15.0% |
!!! | GAACTTAATAGAATATTTTT+AGG | - | chr8_2:13724455-13724474 | Msa1235610:intron | 15.0% |
!!! | TGCTGTTTTTTTTTTTTTTT+TGG | - | chr8_2:13724975-13724994 | Msa1235610:intron | 15.0% |
!!! | GCTGTTTTTTTTTTTTTTTT+GGG | - | chr8_2:13724976-13724995 | Msa1235610:intron | 15.0% |
!!! | CTGTTTTTTTTTTTTTTTTG+GGG | - | chr8_2:13724977-13724996 | Msa1235610:intron | 15.0% |
!!! | AATACTTCTAGTTTTTAAAT+GGG | + | chr8_2:13725176-13725195 | None:intergenic | 15.0% |
!!! | AAATACTTCTAGTTTTTAAA+TGG | + | chr8_2:13725177-13725196 | None:intergenic | 15.0% |
!!! | AAATGATGTATTCAATTTTT+TGG | - | chr8_2:13725204-13725223 | Msa1235610:intron | 15.0% |
!! | CAATACTTAAAATATACAAT+GGG | - | chr8_2:13725566-13725585 | Msa1235610:intron | 15.0% |
!!! | AACTATTTTAAGAGAATTTA+AGG | - | chr8_2:13726030-13726049 | Msa1235610:CDS | 15.0% |
!!! | ACTATTTTAAGAGAATTTAA+GGG | - | chr8_2:13726031-13726050 | Msa1235610:CDS | 15.0% |
!!! | TGTTATTTAAAGATATCTTA+GGG | - | chr8_2:13726091-13726110 | Msa1235610:intron | 15.0% |
!!! | TTATTTCCTTTAAGATTAAA+GGG | + | chr8_2:13726215-13726234 | None:intergenic | 15.0% |
!! | GTTGTTTATAAATATAACAA+TGG | - | chr8_2:13727143-13727162 | Msa1235610:intron | 15.0% |
!!! | TGACTTTTTTTTTTTTTTAC+AGG | + | chr8_2:13727301-13727320 | None:intergenic | 15.0% |
!! | AAAAACAAAATCAACAAATA+AGG | + | chr8_2:13727940-13727959 | None:intergenic | 15.0% |
!! | ACATGAAAAAAAATTCATTA+AGG | - | chr8_2:13728901-13728920 | Msa1235610:intron | 15.0% |
!! | TGATAATAATACATAAAATG+CGG | + | chr8_2:13729049-13729068 | None:intergenic | 15.0% |
!! | CCAATCATACATAAAAATTT+AGG | + | chr8_2:13724144-13724163 | None:intergenic | 20.0% |
!!! | CCTAAATTTTTATGTATGAT+TGG | - | chr8_2:13724141-13724160 | Msa1235610:intron | 20.0% |
!!! | TGAGTGTAGAATATATATTT+TGG | - | chr8_2:13724181-13724200 | Msa1235610:intron | 20.0% |
!! | AAAAAATAAACTATGATGCT+AGG | - | chr8_2:13724260-13724279 | Msa1235610:intron | 20.0% |
!! | AGATTTGGCTATTATAAAAT+AGG | - | chr8_2:13724428-13724447 | Msa1235610:intron | 20.0% |
!!! | ATATTTTTAGGTTTCAAAGT+TGG | - | chr8_2:13724467-13724486 | Msa1235610:intron | 20.0% |
!!! | TGTTAGGATTTTATTATCAA+AGG | - | chr8_2:13724511-13724530 | Msa1235610:intron | 20.0% |
!!! | GTTAGGATTTTATTATCAAA+GGG | - | chr8_2:13724512-13724531 | Msa1235610:intron | 20.0% |
!! | ATCCATTCATTTATTTGAAT+AGG | - | chr8_2:13724847-13724866 | Msa1235610:intron | 20.0% |
!!! | AAAAACTAGAAGTATTTTGT+TGG | - | chr8_2:13725180-13725199 | Msa1235610:intron | 20.0% |
!!! | AATTTCGATCATTGATTTTT+GGG | - | chr8_2:13725354-13725373 | Msa1235610:intron | 20.0% |
!!! | GAGATTAGAAATTTTTTCAA+CGG | + | chr8_2:13725482-13725501 | None:intergenic | 20.0% |
!! | GCAATACTTAAAATATACAA+TGG | - | chr8_2:13725565-13725584 | Msa1235610:intron | 20.0% |
!!! | AAAATATACAATGGGTTTTT+TGG | - | chr8_2:13725574-13725593 | Msa1235610:intron | 20.0% |
!!! | AAATATACAATGGGTTTTTT+GGG | - | chr8_2:13725575-13725594 | Msa1235610:intron | 20.0% |
!!! | TTTTTTTGCAATCACTTATT+TGG | - | chr8_2:13725711-13725730 | Msa1235610:intron | 20.0% |
!!! | TTTTTTGCAATCACTTATTT+GGG | - | chr8_2:13725712-13725731 | Msa1235610:intron | 20.0% |
!! | AGAGTATAAACCTATTAATT+TGG | + | chr8_2:13725754-13725773 | None:intergenic | 20.0% |
!!! | ATTATTTTCAAGGCTTTTAA+AGG | + | chr8_2:13725845-13725864 | None:intergenic | 20.0% |
!!! | AACAACATCATTATTTTCAA+TGG | + | chr8_2:13725969-13725988 | None:intergenic | 20.0% |
!! | GAAAATAATGATGTTGTTAA+CGG | - | chr8_2:13725971-13725990 | Msa1235610:intron | 20.0% |
!! | ATGTCTATTATAAAACTAGA+GGG | - | chr8_2:13726060-13726079 | Msa1235610:intron | 20.0% |
!!! | GTGTTATTTAAAGATATCTT+AGG | - | chr8_2:13726090-13726109 | Msa1235610:intron | 20.0% |
!! | GTTATTTAAAGATATCTTAG+GGG | - | chr8_2:13726092-13726111 | Msa1235610:intron | 20.0% |
!!! | GTTATTTCCTTTAAGATTAA+AGG | + | chr8_2:13726216-13726235 | None:intergenic | 20.0% |
!! | AACTCTAGATTATATAAACT+AGG | - | chr8_2:13726233-13726252 | Msa1235610:intron | 20.0% |
!! | ACTCTAGATTATATAAACTA+GGG | - | chr8_2:13726234-13726253 | Msa1235610:intron | 20.0% |
!!! | TTAGTCAACAGAATTTATTT+TGG | + | chr8_2:13726374-13726393 | None:intergenic | 20.0% |
!! | AATTCAGTTCAATATTAAAG+CGG | - | chr8_2:13726437-13726456 | Msa1235610:intron | 20.0% |
!! | TATGATTTAAAAAAGGTGAT+GGG | - | chr8_2:13726776-13726795 | Msa1235610:intron | 20.0% |
!! | TGTTGAATATGCAAATAAAA+AGG | - | chr8_2:13726889-13726908 | Msa1235610:intron | 20.0% |
!!! | ACAATCTTTAAAATATGAGT+AGG | + | chr8_2:13726985-13727004 | None:intergenic | 20.0% |
!!! | CTCAATCTTTTTAATTTCTT+TGG | + | chr8_2:13728165-13728184 | None:intergenic | 20.0% |
!! | ATTAAAAAGATTGAGTCTAA+AGG | - | chr8_2:13728170-13728189 | Msa1235610:intron | 20.0% |
!! | GAAAAAAAATTCATTAAGGA+TGG | - | chr8_2:13728905-13728924 | Msa1235610:intron | 20.0% |
!! | TATTTACCTTAATTGATCAA+TGG | - | chr8_2:13728954-13728973 | Msa1235610:intron | 20.0% |
!!! | AATATTTAAAACAGCAATAC+TGG | + | chr8_2:13729221-13729240 | None:intergenic | 20.0% |
!!! | CATTTCTCTTATATTTCTAA+CGG | - | chr8_2:13729256-13729275 | Msa1235610:CDS | 20.0% |
! | TAATTAGAAAATGATGGTAG+CGG | - | chr8_2:13724405-13724424 | Msa1235610:intron | 25.0% |
! | CACCTATTCAAATAAATGAA+TGG | + | chr8_2:13724852-13724871 | None:intergenic | 25.0% |
!!! | CAATTTCGATCATTGATTTT+TGG | - | chr8_2:13725353-13725372 | Msa1235610:intron | 25.0% |
!! | TCACTTATTTGGGATAAAAA+TGG | - | chr8_2:13725722-13725741 | Msa1235610:intron | 25.0% |
! | ATGGACAAAACCAAATTAAT+AGG | - | chr8_2:13725741-13725760 | Msa1235610:intron | 25.0% |
! | AAAAGCCTTGAAAATAATGA+TGG | - | chr8_2:13725847-13725866 | Msa1235610:intron | 25.0% |
!!! | ATTTTAAGAGAATTTAAGGG+AGG | - | chr8_2:13726034-13726053 | Msa1235610:CDS | 25.0% |
! | CATGTCTATTATAAAACTAG+AGG | - | chr8_2:13726059-13726078 | Msa1235610:intron | 25.0% |
! | TGTCTATTATAAAACTAGAG+GGG | - | chr8_2:13726061-13726080 | Msa1235610:intron | 25.0% |
!! | TACTCCTAAAAGTGTAAAAT+AGG | + | chr8_2:13726607-13726626 | None:intergenic | 25.0% |
! | TTTAATATCAGAATTGCTTC+AGG | - | chr8_2:13726718-13726737 | Msa1235610:intron | 25.0% |
! | AGGAACCTATGATTTAAAAA+AGG | - | chr8_2:13726769-13726788 | Msa1235610:intron | 25.0% |
!!! | CATCACCTTTTTTAAATCAT+AGG | + | chr8_2:13726777-13726796 | None:intergenic | 25.0% |
! | CTATGATTTAAAAAAGGTGA+TGG | - | chr8_2:13726775-13726794 | Msa1235610:intron | 25.0% |
! | CTCTTATCTAAGAATTTAAG+TGG | + | chr8_2:13727248-13727267 | None:intergenic | 25.0% |
! | AAAGTGGAATTCATCTAAAT+AGG | + | chr8_2:13727423-13727442 | None:intergenic | 25.0% |
! | AACAAAGTCTAATCAAAAAG+TGG | + | chr8_2:13727439-13727458 | None:intergenic | 25.0% |
!! | TTTGATTAGACTTTGTTATC+TGG | - | chr8_2:13727442-13727461 | Msa1235610:intron | 25.0% |
! | CTAAGCAGTAAGTATTATTA+TGG | - | chr8_2:13727773-13727792 | Msa1235610:intron | 25.0% |
! | ATTATAACAAATATCTCCTC+TGG | - | chr8_2:13727857-13727876 | Msa1235610:intron | 25.0% |
!! | TGCCATTTGTTTCAAATTAT+TGG | - | chr8_2:13728089-13728108 | Msa1235610:intron | 25.0% |
!! | CACCAATAATTTGAAACAAA+TGG | + | chr8_2:13728094-13728113 | None:intergenic | 25.0% |
!! | AATTTACATTGACTAGTCAA+TGG | + | chr8_2:13728314-13728333 | None:intergenic | 25.0% |
!!! | TTTTCATTGCTTTTATTGTG+TGG | - | chr8_2:13728370-13728389 | Msa1235610:intron | 25.0% |
! | ACGCAAGTTATATATAATAG+TGG | - | chr8_2:13728397-13728416 | Msa1235610:intron | 25.0% |
!!! | AATTCACTTTAAGAGAGTTT+TGG | + | chr8_2:13728696-13728715 | None:intergenic | 25.0% |
! | TAACTTAATGACTAACAAAG+GGG | + | chr8_2:13728744-13728763 | None:intergenic | 25.0% |
! | GTAACTTAATGACTAACAAA+GGG | + | chr8_2:13728745-13728764 | None:intergenic | 25.0% |
! | TAGAAGAATACTTAAATCCT+TGG | + | chr8_2:13728993-13729012 | None:intergenic | 25.0% |
! | TAATTTCCTCTTAAAAATGC+AGG | - | chr8_2:13729090-13729109 | Msa1235610:intron | 25.0% |
!! | TGTTGTTATCTTGAAGTTTT+TGG | - | chr8_2:13729420-13729439 | Msa1235610:exon | 25.0% |
! | TTTTCGAAGAGAAGAAGAAA+AGG | + | chr8_2:13723642-13723661 | None:intergenic | 30.0% |
TCTTTGTTCTTAATCATCGA+AGG | + | chr8_2:13723802-13723821 | None:intergenic | 30.0% | |
! | CTTGTATTTTCAATCGTCTT+CGG | + | chr8_2:13724051-13724070 | None:intergenic | 30.0% |
GAAGACGATTGAAAATACAA+GGG | - | chr8_2:13724050-13724069 | Msa1235610:intron | 30.0% | |
TACACTGTGAGATTTGAATT+AGG | - | chr8_2:13724226-13724245 | Msa1235610:intron | 30.0% | |
!! | AAGGAAACTTAGTTTGTAGT+TGG | - | chr8_2:13724567-13724586 | Msa1235610:intron | 30.0% |
!!! | TTTAGTCATGCGTTTTGATT+TGG | - | chr8_2:13724619-13724638 | Msa1235610:intron | 30.0% |
! | ATATGACAATTTGGGTTCTT+TGG | - | chr8_2:13724700-13724719 | Msa1235610:intron | 30.0% |
! | CAACTTGTTTGTTCTATGAA+TGG | - | chr8_2:13724817-13724836 | Msa1235610:intron | 30.0% |
GTTTGTTCTATGAATGGTAT+TGG | - | chr8_2:13724823-13724842 | Msa1235610:intron | 30.0% | |
CAACAGAAATTCTAAACAAC+AGG | + | chr8_2:13725084-13725103 | None:intergenic | 30.0% | |
GACATTTACACAAAGCTTAA+GGG | + | chr8_2:13725396-13725415 | None:intergenic | 30.0% | |
TGACATTTACACAAAGCTTA+AGG | + | chr8_2:13725397-13725416 | None:intergenic | 30.0% | |
TTGTCATGTGAGAAAATAGA+GGG | + | chr8_2:13725428-13725447 | None:intergenic | 30.0% | |
TTTGTCATGTGAGAAAATAG+AGG | + | chr8_2:13725429-13725448 | None:intergenic | 30.0% | |
AGTATTGCAATATGCTTTCA+TGG | + | chr8_2:13725553-13725572 | None:intergenic | 30.0% | |
AAATGATCTGAATCAACATG+TGG | + | chr8_2:13725676-13725695 | None:intergenic | 30.0% | |
AATAGGTTTATACTCTGCAA+CGG | - | chr8_2:13725758-13725777 | Msa1235610:intron | 30.0% | |
! | CCATTGTTGTAAACTTTTCA+AGG | + | chr8_2:13725900-13725919 | None:intergenic | 30.0% |
CCTTGAAAAGTTTACAACAA+TGG | - | chr8_2:13725897-13725916 | Msa1235610:intron | 30.0% | |
ACAACAATGGCAGTAATATT+TGG | - | chr8_2:13725910-13725929 | Msa1235610:intron | 30.0% | |
! | AGTAATATTTGGTGGTTTAG+TGG | - | chr8_2:13725921-13725940 | Msa1235610:intron | 30.0% |
TTAACAGTGTTAAGTCACAA+AGG | - | chr8_2:13725998-13726017 | Msa1235610:CDS | 30.0% | |
TAACAGTGTTAAGTCACAAA+GGG | - | chr8_2:13725999-13726018 | Msa1235610:CDS | 30.0% | |
GTCTATTATAAAACTAGAGG+GGG | - | chr8_2:13726062-13726081 | Msa1235610:intron | 30.0% | |
ATTTAAAGATATCTTAGGGG+AGG | - | chr8_2:13726095-13726114 | Msa1235610:intron | 30.0% | |
GCTATTCAACGAAAAATCAA+GGG | + | chr8_2:13726134-13726153 | None:intergenic | 30.0% | |
AGCTATTCAACGAAAAATCA+AGG | + | chr8_2:13726135-13726154 | None:intergenic | 30.0% | |
!! | TCCTTTAAGATTAAAGGGAT+GGG | + | chr8_2:13726210-13726229 | None:intergenic | 30.0% |
!! | TTCCTTTAAGATTAAAGGGA+TGG | + | chr8_2:13726211-13726230 | None:intergenic | 30.0% |
ACGAAACAAGAGTAATTCTT+GGG | - | chr8_2:13726266-13726285 | Msa1235610:intron | 30.0% | |
CAAGTGGTGATTAATATCTT+GGG | + | chr8_2:13726472-13726491 | None:intergenic | 30.0% | |
AAATCAAATCAAGAAGGCAA+GGG | + | chr8_2:13726579-13726598 | None:intergenic | 30.0% | |
! | GCATCCTATTTTACACTTTT+AGG | - | chr8_2:13726600-13726619 | Msa1235610:intron | 30.0% |
AGCAATTCTGATATTAAAGC+AGG | + | chr8_2:13726716-13726735 | None:intergenic | 30.0% | |
! | TGTTTTACGCAAGGATATTA+AGG | - | chr8_2:13727110-13727129 | Msa1235610:intron | 30.0% |
TGGCACTAACAATATAAGAA+AGG | + | chr8_2:13727831-13727850 | None:intergenic | 30.0% | |
! | ACAGTGTTTCTATGTAATGA+TGG | - | chr8_2:13727883-13727902 | Msa1235610:intron | 30.0% |
! | CAGTGTTTCTATGTAATGAT+GGG | - | chr8_2:13727884-13727903 | Msa1235610:intron | 30.0% |
AATATACCTAAGAACGTGAT+TGG | + | chr8_2:13728135-13728154 | None:intergenic | 30.0% | |
! | CAAATTATTGACTAGTAGTC+TGG | - | chr8_2:13728451-13728470 | Msa1235610:intron | 30.0% |
ATTGTCTACTCATGTGATTT+AGG | - | chr8_2:13728482-13728501 | Msa1235610:intron | 30.0% | |
AGTAGTAGTAAAAGGAAGAT+AGG | - | chr8_2:13728533-13728552 | Msa1235610:intron | 30.0% | |
CGTAACTTAATGACTAACAA+AGG | + | chr8_2:13728746-13728765 | None:intergenic | 30.0% | |
CTATTTATTAAGTGCATGTG+AGG | + | chr8_2:13728798-13728817 | None:intergenic | 30.0% | |
CTCACATGCACTTAATAAAT+AGG | - | chr8_2:13728796-13728815 | Msa1235610:intron | 30.0% | |
ACATGCACTTAATAAATAGG+AGG | - | chr8_2:13728799-13728818 | Msa1235610:intron | 30.0% | |
AGATTGCCATTGATCAATTA+AGG | + | chr8_2:13728963-13728982 | None:intergenic | 30.0% | |
AATACTAAGCCAAAACATGA+AGG | + | chr8_2:13729023-13729042 | None:intergenic | 30.0% | |
! | AATTATTGCTGAGGCAATTT+TGG | + | chr8_2:13729075-13729094 | None:intergenic | 30.0% |
TTAAGAGGAAATTATTGCTG+AGG | + | chr8_2:13729084-13729103 | None:intergenic | 30.0% | |
TTAACTTCAATGTGAAACGA+GGG | + | chr8_2:13729123-13729142 | None:intergenic | 30.0% | |
! | TTTAACTTCAATGTGAAACG+AGG | + | chr8_2:13729124-13729143 | None:intergenic | 30.0% |
TAAAAGTGGAGAATATGAGT+GGG | - | chr8_2:13729171-13729190 | Msa1235610:intron | 30.0% | |
TTCCAAGAGAAAAACCAGAA+CGG | - | chr8_2:13723744-13723763 | Msa1235610:exon | 35.0% | |
TGTTCTTAATCATCGAAGGA+CGG | + | chr8_2:13723798-13723817 | None:intergenic | 35.0% | |
GTTAAAAGAGCTATTGAGCT+CGG | - | chr8_2:13723904-13723923 | Msa1235610:intron | 35.0% | |
CGAAGACGATTGAAAATACA+AGG | - | chr8_2:13724049-13724068 | Msa1235610:intron | 35.0% | |
TTCCTTAACTAGTGCTCTAA+GGG | + | chr8_2:13724553-13724572 | None:intergenic | 35.0% | |
TTTCCTTAACTAGTGCTCTA+AGG | + | chr8_2:13724554-13724573 | None:intergenic | 35.0% | |
!! | AACTTAGTTTGTAGTTGGCT+CGG | - | chr8_2:13724572-13724591 | Msa1235610:intron | 35.0% |
AAACGCATGACTAAATTGTG+TGG | + | chr8_2:13724614-13724633 | None:intergenic | 35.0% | |
! | AGAAAATTCGAAAGGGGTTT+TGG | - | chr8_2:13724667-13724686 | Msa1235610:intron | 35.0% |
TCGTATGGCATATGACAATT+TGG | - | chr8_2:13724691-13724710 | Msa1235610:intron | 35.0% | |
CGTATGGCATATGACAATTT+GGG | - | chr8_2:13724692-13724711 | Msa1235610:intron | 35.0% | |
! | GATAGTTGATGCTAATGAGA+TGG | - | chr8_2:13724759-13724778 | Msa1235610:intron | 35.0% |
! | TTTTTCTGCTTTGTGTGTGT+TGG | - | chr8_2:13725004-13725023 | Msa1235610:intron | 35.0% |
ATTTACACAAAGCTTAAGGG+AGG | + | chr8_2:13725393-13725412 | None:intergenic | 35.0% | |
TGTCATGTGAGAAAATAGAG+GGG | + | chr8_2:13725427-13725446 | None:intergenic | 35.0% | |
!!! | GAGTGTGGGTATCATTTTTT+AGG | + | chr8_2:13725523-13725542 | None:intergenic | 35.0% |
ATTGCAATATGCTTTCATGG+TGG | + | chr8_2:13725550-13725569 | None:intergenic | 35.0% | |
ATCTGAATCAACATGTGGAT+AGG | + | chr8_2:13725671-13725690 | None:intergenic | 35.0% | |
! | TATACTCTGCAACGGTTTTA+TGG | - | chr8_2:13725766-13725785 | Msa1235610:intron | 35.0% |
!! | ATACTCTGCAACGGTTTTAT+GGG | - | chr8_2:13725767-13725786 | Msa1235610:intron | 35.0% |
ACAATGGCAGTAATATTTGG+TGG | - | chr8_2:13725913-13725932 | Msa1235610:intron | 35.0% | |
! | AATATTTGGTGGTTTAGTGG+AGG | - | chr8_2:13725924-13725943 | Msa1235610:intron | 35.0% |
!! | AACTTTAGAGTGTAAAGTGC+AGG | + | chr8_2:13726161-13726180 | None:intergenic | 35.0% |
ACCCATCCCTTTAATCTTAA+AGG | - | chr8_2:13726206-13726225 | Msa1235610:CDS | 35.0% | |
! | AGAATTACTCTTGTTTCGTC+TGG | + | chr8_2:13726265-13726284 | None:intergenic | 35.0% |
GACGAAACAAGAGTAATTCT+TGG | - | chr8_2:13726265-13726284 | Msa1235610:intron | 35.0% | |
ATTTGTTTGCAGCTATTTGC+TGG | - | chr8_2:13726400-13726419 | Msa1235610:intron | 35.0% | |
GCAAGTGGTGATTAATATCT+TGG | + | chr8_2:13726473-13726492 | None:intergenic | 35.0% | |
AACATACCGTAGAATTGAAG+CGG | + | chr8_2:13726495-13726514 | None:intergenic | 35.0% | |
GAATACAAACAACAGACTAG+AGG | + | chr8_2:13726519-13726538 | None:intergenic | 35.0% | |
CAAATCAAATCAAGAAGGCA+AGG | + | chr8_2:13726580-13726599 | None:intergenic | 35.0% | |
! | CTTGCCTTCTTGATTTGATT+TGG | - | chr8_2:13726578-13726597 | Msa1235610:intron | 35.0% |
GATGCCAAATCAAATCAAGA+AGG | + | chr8_2:13726585-13726604 | None:intergenic | 35.0% | |
GTCAAAAATCAACAGACAGA+TGG | + | chr8_2:13726676-13726695 | None:intergenic | 35.0% | |
!!! | ATTTTTGACTTCATCTGCAG+AGG | - | chr8_2:13726687-13726706 | Msa1235610:intron | 35.0% |
!!! | TTTTTGACTTCATCTGCAGA+GGG | - | chr8_2:13726688-13726707 | Msa1235610:intron | 35.0% |
CTCTTGAAGTAATGTGCATT+TGG | + | chr8_2:13726749-13726768 | None:intergenic | 35.0% | |
AATGCACATTACTTCAAGAG+AGG | - | chr8_2:13726749-13726768 | Msa1235610:intron | 35.0% | |
TGAGTAGGATCTTTACTCAA+AGG | + | chr8_2:13726970-13726989 | None:intergenic | 35.0% | |
!! | CAAGAGAGCATCTGAAAAAT+AGG | + | chr8_2:13727040-13727059 | None:intergenic | 35.0% |
TCAGATGCTCTCTTGATTAT+TGG | - | chr8_2:13727045-13727064 | Msa1235610:intron | 35.0% | |
!! | TTGATTATTGGCTTACCTGA+AGG | - | chr8_2:13727057-13727076 | Msa1235610:intron | 35.0% |
!!! | CACAAATCTTGTTTTACGCA+AGG | - | chr8_2:13727101-13727120 | Msa1235610:intron | 35.0% |
AAATAGGTAAGACAAAGTGC+AGG | + | chr8_2:13727407-13727426 | None:intergenic | 35.0% | |
TGTTATCTGGAAAGATCAAG+TGG | - | chr8_2:13727455-13727474 | Msa1235610:intron | 35.0% | |
AGAGAGACTTCATATTCTTC+CGG | - | chr8_2:13728033-13728052 | Msa1235610:intron | 35.0% | |
GTCTAAAGGTAAAAATGACG+AGG | - | chr8_2:13728184-13728203 | Msa1235610:intron | 35.0% | |
AAAGGTAAAAATGACGAGGA+TGG | - | chr8_2:13728188-13728207 | Msa1235610:intron | 35.0% | |
CCATTGAGTTTGAAAATGGA+AGG | + | chr8_2:13728291-13728310 | None:intergenic | 35.0% | |
! | CCTTCCATTTTCAAACTCAA+TGG | - | chr8_2:13728288-13728307 | Msa1235610:intron | 35.0% |
ATGGCCATTGAGTTTGAAAA+TGG | + | chr8_2:13728295-13728314 | None:intergenic | 35.0% | |
GCGTTGAAAGTAGTAGTAAA+AGG | - | chr8_2:13728525-13728544 | Msa1235610:intron | 35.0% | |
!!! | TTTTGGAATTTCAGAGTTGC+AGG | + | chr8_2:13728679-13728698 | None:intergenic | 35.0% |
ATGGCAATCTAATGTTACCA+AGG | - | chr8_2:13728973-13728992 | Msa1235610:intron | 35.0% | |
! | TACCTGATTCCTTCATGTTT+TGG | - | chr8_2:13729011-13729030 | Msa1235610:CDS | 35.0% |
CTCTTAAAAATGCAGGAATG+CGG | - | chr8_2:13729097-13729116 | Msa1235610:intron | 35.0% | |
GGAACATTTGACACTAAAAG+TGG | - | chr8_2:13729157-13729176 | Msa1235610:intron | 35.0% | |
CTAAAAGTGGAGAATATGAG+TGG | - | chr8_2:13729170-13729189 | Msa1235610:intron | 35.0% | |
AAATGCAAAGTTCCAAGACA+AGG | + | chr8_2:13729361-13729380 | None:intergenic | 35.0% | |
! | TGTCTTGGAACTTTGCATTT+TGG | - | chr8_2:13729361-13729380 | Msa1235610:CDS | 35.0% |
GTTATTCCTACAATGGCGAT+CGG | - | chr8_2:13723676-13723695 | Msa1235610:three_prime_UTR | 40.0% | |
AAGCGCAACAATGATTCAGA+CGG | - | chr8_2:13723709-13723728 | Msa1235610:three_prime_UTR | 40.0% | |
!!! | TTCCGTTCTGGTTTTTCTCT+TGG | + | chr8_2:13723749-13723768 | None:intergenic | 40.0% |
AACCAGAACGGAAACAGAAA+CGG | - | chr8_2:13723756-13723775 | Msa1235610:exon | 40.0% | |
TTAATCATCGAAGGACGGAA+CGG | + | chr8_2:13723793-13723812 | None:intergenic | 40.0% | |
CTTCTTCTGATGCTTAAGCT+TGG | + | chr8_2:13723845-13723864 | None:intergenic | 40.0% | |
AACTCAACCTCTTCATCATC+AGG | + | chr8_2:13724099-13724118 | None:intergenic | 40.0% | |
! | ATCAGCTTCAAGTTTGTCAG+TGG | + | chr8_2:13724371-13724390 | None:intergenic | 40.0% |
!! | AAATGATGGTAGCGGAGATT+TGG | - | chr8_2:13724413-13724432 | Msa1235610:intron | 40.0% |
CAACAGTTAGAGCAACTGTT+AGG | - | chr8_2:13724495-13724514 | Msa1235610:intron | 40.0% | |
AGCCGAGAAGAAAATTCGAA+AGG | - | chr8_2:13724659-13724678 | Msa1235610:intron | 40.0% | |
GCCGAGAAGAAAATTCGAAA+GGG | - | chr8_2:13724660-13724679 | Msa1235610:intron | 40.0% | |
! | CCCCTTTCGAATTTTCTTCT+CGG | + | chr8_2:13724664-13724683 | None:intergenic | 40.0% |
CCGAGAAGAAAATTCGAAAG+GGG | - | chr8_2:13724661-13724680 | Msa1235610:intron | 40.0% | |
GCTATGATGACTCATGCAAA+CGG | + | chr8_2:13724884-13724903 | None:intergenic | 40.0% | |
! | CATCATGTTTTCTTGCCTTC+TGG | - | chr8_2:13724927-13724946 | Msa1235610:CDS | 40.0% |
CTTTGTGTGTGTTGGATTGT+TGG | - | chr8_2:13725012-13725031 | Msa1235610:intron | 40.0% | |
TCATGTTAACATGTGCCCTA+CGG | + | chr8_2:13725274-13725293 | None:intergenic | 40.0% | |
AGAAACACACCAGTAAGGAA+TGG | + | chr8_2:13725614-13725633 | None:intergenic | 40.0% | |
TCACTAGAAACACACCAGTA+AGG | + | chr8_2:13725619-13725638 | None:intergenic | 40.0% | |
AATCAACATGTGGATAGGAG+CGG | + | chr8_2:13725666-13725685 | None:intergenic | 40.0% | |
!! | TACTCTGCAACGGTTTTATG+GGG | - | chr8_2:13725768-13725787 | Msa1235610:intron | 40.0% |
! | CGCTGCCATCATTATTTTCA+AGG | + | chr8_2:13725855-13725874 | None:intergenic | 40.0% |
!! | GTAGGAGAACTTTAGAGTGT+AGG | + | chr8_2:13726168-13726187 | None:intergenic | 40.0% |
AAGATTAAAGGGATGGGTGT+AGG | + | chr8_2:13726204-13726223 | None:intergenic | 40.0% | |
TTTAGGAGTAAGAGTCGAGT+TGG | - | chr8_2:13726617-13726636 | Msa1235610:CDS | 40.0% | |
!!! | TTTTGACTTCATCTGCAGAG+GGG | - | chr8_2:13726689-13726708 | Msa1235610:intron | 40.0% |
!!! | CTGACTGCTTTTTATCCACA+CGG | + | chr8_2:13726821-13726840 | None:intergenic | 40.0% |
TAGTTGTACACACCAATCGT+AGG | - | chr8_2:13726927-13726946 | Msa1235610:intron | 40.0% | |
AGTTGTACACACCAATCGTA+GGG | - | chr8_2:13726928-13726947 | Msa1235610:intron | 40.0% | |
GCATCTGAAAAATAGGAGCA+AGG | + | chr8_2:13727033-13727052 | None:intergenic | 40.0% | |
! | GTGAGTTTGAAATGAGCAGT+AGG | + | chr8_2:13727084-13727103 | None:intergenic | 40.0% |
TCTGATCTCCTCATTGATGT+CGG | - | chr8_2:13727178-13727197 | Msa1235610:intron | 40.0% | |
AATGTACACCGACATCAATG+AGG | + | chr8_2:13727189-13727208 | None:intergenic | 40.0% | |
AAGTTGTTCAACACAAGCTC+AGG | + | chr8_2:13727590-13727609 | None:intergenic | 40.0% | |
AAAAGTGATATGCCCATGCT+AGG | - | chr8_2:13727716-13727735 | Msa1235610:intron | 40.0% | |
ATTTCAGTCAGACCTAGCAT+GGG | + | chr8_2:13727731-13727750 | None:intergenic | 40.0% | |
TATTTCAGTCAGACCTAGCA+TGG | + | chr8_2:13727732-13727751 | None:intergenic | 40.0% | |
CTGCTTAGAAAACAACTGAC+AGG | + | chr8_2:13727761-13727780 | None:intergenic | 40.0% | |
ATAGAAACACTGTGAACCAG+AGG | + | chr8_2:13727876-13727895 | None:intergenic | 40.0% | |
ATATGAAGTCTCTCTGGTTG+TGG | + | chr8_2:13728028-13728047 | None:intergenic | 40.0% | |
GGAAGAATATGAAGTCTCTC+TGG | + | chr8_2:13728034-13728053 | None:intergenic | 40.0% | |
TCATATTCTTCCGGCATCAT+CGG | - | chr8_2:13728042-13728061 | Msa1235610:intron | 40.0% | |
! | AAGAATTGTACCGATGATGC+CGG | + | chr8_2:13728055-13728074 | None:intergenic | 40.0% |
ATGTGTCCAATCACGTTCTT+AGG | - | chr8_2:13728126-13728145 | Msa1235610:intron | 40.0% | |
!! | GAAGACGGGCAATTGTTTTA+TGG | + | chr8_2:13728235-13728254 | None:intergenic | 40.0% |
TAAAACAATTGCCCGTCTTC+AGG | - | chr8_2:13728235-13728254 | Msa1235610:intron | 40.0% | |
AATTGACACCAACCTGAAGA+CGG | + | chr8_2:13728250-13728269 | None:intergenic | 40.0% | |
GAAAGAGGTTTGCAATGCAT+TGG | + | chr8_2:13728591-13728610 | None:intergenic | 40.0% | |
CTTAATGACTAACAAAGGGG+AGG | + | chr8_2:13728741-13728760 | None:intergenic | 40.0% | |
TTAAGTGCATGTGAGGATTG+AGG | + | chr8_2:13728791-13728810 | None:intergenic | 40.0% | |
AGCCAAAACATGAAGGAATC+AGG | + | chr8_2:13729016-13729035 | None:intergenic | 40.0% | |
!! | CGCATTCCTGCATTTTTAAG+AGG | + | chr8_2:13729099-13729118 | None:intergenic | 40.0% |
AAGTTAAAAAGCCTGCAGCA+TGG | - | chr8_2:13729136-13729155 | Msa1235610:intron | 40.0% | |
! | AGAATATGAGTGGGTTCACA+AGG | - | chr8_2:13729180-13729199 | Msa1235610:intron | 40.0% |
! | TGCCTTCTTTTCCTTTTAGC+CGG | - | chr8_2:13729300-13729319 | Msa1235610:CDS | 40.0% |
TTCCGGCTAAAAGGAAAAGA+AGG | + | chr8_2:13729305-13729324 | None:intergenic | 40.0% | |
! | CTTTTCCTTTTAGCCGGAAA+TGG | - | chr8_2:13729306-13729325 | Msa1235610:CDS | 40.0% |
! | TTTTTCCTGTGACCTTGTCT+TGG | - | chr8_2:13729346-13729365 | Msa1235610:CDS | 40.0% |
! | ATTTTGGACTGCATTTCAGC+TGG | - | chr8_2:13729377-13729396 | Msa1235610:CDS | 40.0% |
TTCCGTTTCTGTTTCCGTTC+TGG | + | chr8_2:13723761-13723780 | None:intergenic | 45.0% | |
GGAAACAGAAACGGAAACGA+AGG | - | chr8_2:13723765-13723784 | Msa1235610:CDS | 45.0% | |
TAATCATCGAAGGACGGAAC+GGG | + | chr8_2:13723792-13723811 | None:intergenic | 45.0% | |
CGAAAAACGCGCTAAGTCTA+AGG | - | chr8_2:13723867-13723886 | Msa1235610:intron | 45.0% | |
! | TTGTGTGTTGTTGTAGCCTC+CGG | - | chr8_2:13724014-13724033 | Msa1235610:intron | 45.0% |
! | TTGCAAGCCTGATGATGAAG+AGG | - | chr8_2:13724089-13724108 | Msa1235610:intron | 45.0% |
! | TGCCCTTAGAGCACTAGTTA+AGG | - | chr8_2:13724548-13724567 | Msa1235610:intron | 45.0% |
!!! | TAGTTGGCTCGGTTTTGCAT+TGG | - | chr8_2:13724583-13724602 | Msa1235610:intron | 45.0% |
GATGCTAATGAGATGGTCGA+TGG | - | chr8_2:13724766-13724785 | Msa1235610:intron | 45.0% | |
TGTGTGTTGGATTGTTGGTG+TGG | - | chr8_2:13725017-13725036 | Msa1235610:intron | 45.0% | |
GTGTGTTGGATTGTTGGTGT+GGG | - | chr8_2:13725018-13725037 | Msa1235610:intron | 45.0% | |
TGTGTTGGATTGTTGGTGTG+GGG | - | chr8_2:13725019-13725038 | Msa1235610:intron | 45.0% | |
!! | TTGCTTAAAGAGTGCCCGTA+GGG | - | chr8_2:13725256-13725275 | Msa1235610:intron | 45.0% |
CATGTTAACATGTGCCCTAC+GGG | + | chr8_2:13725273-13725292 | None:intergenic | 45.0% | |
ACTAGACTGCTCTAACAGCT+GGG | + | chr8_2:13725458-13725477 | None:intergenic | 45.0% | |
AACTAGACTGCTCTAACAGC+TGG | + | chr8_2:13725459-13725478 | None:intergenic | 45.0% | |
! | TTCATGGTGGAAGAGAGTGT+GGG | + | chr8_2:13725537-13725556 | None:intergenic | 45.0% |
! | TTTCATGGTGGAAGAGAGTG+TGG | + | chr8_2:13725538-13725557 | None:intergenic | 45.0% |
CGTGTGTTTCCATTCCTTAC+TGG | - | chr8_2:13725602-13725621 | Msa1235610:intron | 45.0% | |
TGATGGCAGCGCTAGATATT+TGG | - | chr8_2:13725864-13725883 | Msa1235610:intron | 45.0% | |
GATGGCAGCGCTAGATATTT+GGG | - | chr8_2:13725865-13725884 | Msa1235610:intron | 45.0% | |
ATGGCAGCGCTAGATATTTG+GGG | - | chr8_2:13725866-13725885 | Msa1235610:intron | 45.0% | |
CAGTGTTAAGTCACAAAGGG+AGG | - | chr8_2:13726002-13726021 | Msa1235610:CDS | 45.0% | |
! | CACTTGCCGCTTCAATTCTA+CGG | - | chr8_2:13726486-13726505 | Msa1235610:intron | 45.0% |
TCACTATCTCTTTCACCGTG+TGG | - | chr8_2:13726803-13726822 | Msa1235610:intron | 45.0% | |
AAATGAGCAGTAGGTCCTTC+AGG | + | chr8_2:13727075-13727094 | None:intergenic | 45.0% | |
AACAACTTCACAACACGCCT+AGG | - | chr8_2:13727602-13727621 | Msa1235610:intron | 45.0% | |
ACAACTTCACAACACGCCTA+GGG | - | chr8_2:13727603-13727622 | Msa1235610:intron | 45.0% | |
CCTTTAAACTCGGGATCTTG+GGG | + | chr8_2:13727987-13728006 | None:intergenic | 45.0% | |
CCCTTTAAACTCGGGATCTT+GGG | + | chr8_2:13727988-13728007 | None:intergenic | 45.0% | |
CCCAAGATCCCGAGTTTAAA+GGG | - | chr8_2:13727985-13728004 | Msa1235610:intron | 45.0% | |
TACACGTCGCCCTTTAAACT+CGG | + | chr8_2:13727997-13728016 | None:intergenic | 45.0% | |
!! | CGGGCAATTGTTTTATGGTC+AGG | + | chr8_2:13728230-13728249 | None:intergenic | 45.0% |
ATTGACACCAACCTGAAGAC+GGG | + | chr8_2:13728249-13728268 | None:intergenic | 45.0% | |
TTGCAGGTACTCAAAACCTG+AGG | + | chr8_2:13728663-13728682 | None:intergenic | 45.0% | |
TCTTCTGCGGCAGTATTGTT+AGG | + | chr8_2:13728828-13728847 | None:intergenic | 45.0% | |
GACCAATCCTTCCAACATGA+CGG | + | chr8_2:13728860-13728879 | None:intergenic | 45.0% | |
TGTCAAATGTTCCATGCTGC+AGG | + | chr8_2:13729150-13729169 | None:intergenic | 45.0% | |
TGTGTCCATTTCCGGCTAAA+AGG | + | chr8_2:13729314-13729333 | None:intergenic | 45.0% | |
! | CTTCGACTTGTGTCCATTTC+CGG | + | chr8_2:13729322-13729341 | None:intergenic | 45.0% |
AAATGGACACAAGTCGAAGG+AGG | - | chr8_2:13729323-13729342 | Msa1235610:CDS | 45.0% | |
AAGTTCCAAGACAAGGTCAC+AGG | + | chr8_2:13729354-13729373 | None:intergenic | 45.0% | |
ACTGCATTTCAGCTGGAACT+TGG | - | chr8_2:13729384-13729403 | Msa1235610:CDS | 45.0% | |
CAGCTGGAACTTGGTTAATC+TGG | - | chr8_2:13729393-13729412 | Msa1235610:CDS | 45.0% | |
!! | ATAAATAATAATTAGTTAAA+GGG | + | chr8_2:13725297-13725316 | None:intergenic | 5.0% |
!! | AATAAATAATAATTAGTTAA+AGG | + | chr8_2:13725298-13725317 | None:intergenic | 5.0% |
!!! | TTTTGTATTTTAATTTATTA+TGG | - | chr8_2:13729468-13729487 | Msa1235610:five_prime_UTR | 5.0% |
CGCGGTGGTTATTCCTACAA+TGG | - | chr8_2:13723669-13723688 | Msa1235610:three_prime_UTR | 50.0% | |
ATTCCTACAATGGCGATCGG+TGG | - | chr8_2:13723679-13723698 | Msa1235610:three_prime_UTR | 50.0% | |
TTTCCACCGATCGCCATTGT+AGG | + | chr8_2:13723685-13723704 | None:intergenic | 50.0% | |
!!! | GAAAGGGGTTTTGGCTCGTA+TGG | - | chr8_2:13724676-13724695 | Msa1235610:intron | 50.0% |
GGTCGATGGAGATGTAGTCT+TGG | - | chr8_2:13724780-13724799 | Msa1235610:intron | 50.0% | |
ATAGCTGTTGTGTGAGCTGC+AGG | - | chr8_2:13724899-13724918 | Msa1235610:CDS | 50.0% | |
TTGTTGGTGTGGGGATCTGT+TGG | - | chr8_2:13725028-13725047 | Msa1235610:intron | 50.0% | |
TGGGGATCTGTTGGATACAG+CGG | - | chr8_2:13725037-13725056 | Msa1235610:intron | 50.0% | |
! | CTGATTTGTGCGCGCATGTA+CGG | - | chr8_2:13725122-13725141 | Msa1235610:CDS | 50.0% |
!! | CTTGCTTAAAGAGTGCCCGT+AGG | - | chr8_2:13725255-13725274 | Msa1235610:intron | 50.0% |
CTAGACTGCTCTAACAGCTG+GGG | + | chr8_2:13725457-13725476 | None:intergenic | 50.0% | |
CGTAGAATTGAAGCGGCAAG+TGG | + | chr8_2:13726488-13726507 | None:intergenic | 50.0% | |
!! | AGGAGTAAGAGTCGAGTTGG+AGG | - | chr8_2:13726620-13726639 | Msa1235610:CDS | 50.0% |
CCTACTTGGTTCCCTACGAT+TGG | + | chr8_2:13726942-13726961 | None:intergenic | 50.0% | |
CCAATCGTAGGGAACCAAGT+AGG | - | chr8_2:13726939-13726958 | Msa1235610:intron | 50.0% | |
ATCGTAGGGAACCAAGTAGG+TGG | - | chr8_2:13726942-13726961 | Msa1235610:intron | 50.0% | |
!! | ACTCAAAGGCACCACCTACT+TGG | + | chr8_2:13726956-13726975 | None:intergenic | 50.0% |
TGTGTCCCCTTGCAGAATCA+TGG | - | chr8_2:13727545-13727564 | Msa1235610:intron | 50.0% | |
GGACTCCATGATTCTGCAAG+GGG | + | chr8_2:13727553-13727572 | None:intergenic | 50.0% | |
GGGACTCCATGATTCTGCAA+GGG | + | chr8_2:13727554-13727573 | None:intergenic | 50.0% | |
TGGGACTCCATGATTCTGCA+AGG | + | chr8_2:13727555-13727574 | None:intergenic | 50.0% | |
TGTTCAACACAAGCTCAGGC+TGG | + | chr8_2:13727586-13727605 | None:intergenic | 50.0% | |
CCCCAAGATCCCGAGTTTAA+AGG | - | chr8_2:13727984-13728003 | Msa1235610:intron | 50.0% | |
GCCCTTTAAACTCGGGATCT+TGG | + | chr8_2:13727989-13728008 | None:intergenic | 50.0% | |
ACACGTCGCCCTTTAAACTC+GGG | + | chr8_2:13727996-13728015 | None:intergenic | 50.0% | |
GAAGTCTCTCTGGTTGTGGA+AGG | + | chr8_2:13728024-13728043 | None:intergenic | 50.0% | |
ACAATTGCCCGTCTTCAGGT+TGG | - | chr8_2:13728239-13728258 | Msa1235610:intron | 50.0% | |
CAGTGGTAGACTGGTAGTCT+TGG | - | chr8_2:13728625-13728644 | Msa1235610:intron | 50.0% | |
! | TGGTAGACTGGTAGTCTTGG+TGG | - | chr8_2:13728628-13728647 | Msa1235610:intron | 50.0% |
! | TTGGTGGATGCAGTATCCTC+AGG | - | chr8_2:13728644-13728663 | Msa1235610:intron | 50.0% |
ATGACTAACAAAGGGGAGGC+TGG | + | chr8_2:13728737-13728756 | None:intergenic | 50.0% | |
TGCATGTGAGGATTGAGGAG+GGG | + | chr8_2:13728786-13728805 | None:intergenic | 50.0% | |
GTGCATGTGAGGATTGAGGA+GGG | + | chr8_2:13728787-13728806 | None:intergenic | 50.0% | |
AGTGCATGTGAGGATTGAGG+AGG | + | chr8_2:13728788-13728807 | None:intergenic | 50.0% | |
ATCCTTCCAACATGACGGCA+AGG | + | chr8_2:13728855-13728874 | None:intergenic | 50.0% | |
TGCCGTCATGTTGGAAGGAT+TGG | - | chr8_2:13728855-13728874 | Msa1235610:intron | 50.0% | |
CGGAAATGGACACAAGTCGA+AGG | - | chr8_2:13729320-13729339 | Msa1235610:CDS | 50.0% | |
CTCTTCGAAAAACCCTCGCG+CGG | - | chr8_2:13723651-13723670 | Msa1235610:three_prime_UTR | 55.0% | |
TAGGAATAACCACCGCGCGA+GGG | + | chr8_2:13723666-13723685 | None:intergenic | 55.0% | |
CAATGGCGATCGGTGGAAAG+AGG | - | chr8_2:13723686-13723705 | Msa1235610:three_prime_UTR | 55.0% | |
AGCTATTGAGCTCGGCGAAG+AGG | - | chr8_2:13723912-13723931 | Msa1235610:intron | 55.0% | |
GTTGTAGCCTCCGGAGAAGA+AGG | - | chr8_2:13724023-13724042 | Msa1235610:intron | 55.0% | |
GTCTTCGGCACCTTCTTCTC+CGG | + | chr8_2:13724036-13724055 | None:intergenic | 55.0% | |
!! | TGATGCTAGGTGTCGCTCAG+TGG | - | chr8_2:13724273-13724292 | Msa1235610:intron | 55.0% |
CTGTTGTGTGAGCTGCAGGT+CGG | - | chr8_2:13724903-13724922 | Msa1235610:CDS | 55.0% | |
ACCTTCCAACACGATGCCCT+AGG | + | chr8_2:13727622-13727641 | None:intergenic | 55.0% | |
ACAAAGGGGAGGCTGGAAGA+TGG | + | chr8_2:13728730-13728749 | None:intergenic | 55.0% | |
TGCCTTGCCGTCATGTTGGA+AGG | - | chr8_2:13728850-13728869 | Msa1235610:intron | 55.0% | |
TTCGAAAAACCCTCGCGCGG+TGG | - | chr8_2:13723654-13723673 | Msa1235610:three_prime_UTR | 60.0% | |
GTAGGAATAACCACCGCGCG+AGG | + | chr8_2:13723667-13723686 | None:intergenic | 60.0% | |
TTCGGCACCTTCTTCTCCGG+AGG | + | chr8_2:13724033-13724052 | None:intergenic | 60.0% | |
!! | CTAGGTGTCGCTCAGTGGCA+CGG | - | chr8_2:13724278-13724297 | Msa1235610:intron | 60.0% |
!! | TAGGTGTCGCTCAGTGGCAC+GGG | - | chr8_2:13724279-13724298 | Msa1235610:intron | 60.0% |
CTTGCCTTCTGGTCTGCCTC+TGG | - | chr8_2:13724938-13724957 | Msa1235610:CDS | 60.0% | |
TGCACCAGAGGCAGACCAGA+AGG | + | chr8_2:13724945-13724964 | None:intergenic | 60.0% | |
CAGCAGTACCACTGCACCAG+AGG | + | chr8_2:13724957-13724976 | None:intergenic | 60.0% | |
GACTGCTCTAACAGCTGGGG+AGG | + | chr8_2:13725454-13725473 | None:intergenic | 60.0% | |
! | GCTCAGGCTGGTGACTGGTT+GGG | + | chr8_2:13727574-13727593 | None:intergenic | 60.0% |
AGCTCAGGCTGGTGACTGGT+TGG | + | chr8_2:13727575-13727594 | None:intergenic | 60.0% | |
CACAAGCTCAGGCTGGTGAC+TGG | + | chr8_2:13727579-13727598 | None:intergenic | 60.0% | |
!! | ACACGCCTAGGGCATCGTGT+TGG | - | chr8_2:13727614-13727633 | Msa1235610:intron | 60.0% |
!! | GCCTAGGGCATCGTGTTGGA+AGG | - | chr8_2:13727618-13727637 | Msa1235610:intron | 60.0% |
ACGGCAAGGCAGCTCTTCTG+CGG | + | chr8_2:13728841-13728860 | None:intergenic | 60.0% | |
GAGCTGCCTTGCCGTCATGT+TGG | - | chr8_2:13728846-13728865 | Msa1235610:intron | 60.0% | |
CTGGTCTGCCTCTGGTGCAG+TGG | - | chr8_2:13724946-13724965 | Msa1235610:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 13723621 | 13729496 | 13723621 | ID=Msa1235610;Name=Msa1235610 |
chr8_2 | mRNA | 13723621 | 13729496 | 13723621 | ID=Msa1235610-mRNA-1;Parent=Msa1235610;Name=Msa1235610-mRNA-1;_AED=0.14;_eAED=0.14;_QI=67|1|1|1|0.9|0.90|11|139|358 |
chr8_2 | exon | 13723621 | 13723798 | 13723621 | ID=Msa1235610-mRNA-1:exon:5323;Parent=Msa1235610-mRNA-1 |
chr8_2 | exon | 13723916 | 13724005 | 13723916 | ID=Msa1235610-mRNA-1:exon:5322;Parent=Msa1235610-mRNA-1 |
chr8_2 | exon | 13724861 | 13724969 | 13724861 | ID=Msa1235610-mRNA-1:exon:5321;Parent=Msa1235610-mRNA-1 |
chr8_2 | exon | 13725054 | 13725152 | 13725054 | ID=Msa1235610-mRNA-1:exon:5320;Parent=Msa1235610-mRNA-1 |
chr8_2 | exon | 13725478 | 13725557 | 13725478 | ID=Msa1235610-mRNA-1:exon:5319;Parent=Msa1235610-mRNA-1 |
chr8_2 | exon | 13725986 | 13726068 | 13725986 | ID=Msa1235610-mRNA-1:exon:5318;Parent=Msa1235610-mRNA-1 |
chr8_2 | exon | 13726161 | 13726230 | 13726161 | ID=Msa1235610-mRNA-1:exon:5317;Parent=Msa1235610-mRNA-1 |
chr8_2 | exon | 13726327 | 13726410 | 13726327 | ID=Msa1235610-mRNA-1:exon:5316;Parent=Msa1235610-mRNA-1 |
chr8_2 | exon | 13726610 | 13726705 | 13726610 | ID=Msa1235610-mRNA-1:exon:5315;Parent=Msa1235610-mRNA-1 |
chr8_2 | exon | 13729007 | 13729087 | 13729007 | ID=Msa1235610-mRNA-1:exon:5314;Parent=Msa1235610-mRNA-1 |
chr8_2 | exon | 13729184 | 13729496 | 13729184 | ID=Msa1235610-mRNA-1:exon:5313;Parent=Msa1235610-mRNA-1 |
chr8_2 | five_prime_UTR | 13729430 | 13729496 | 13729430 | ID=Msa1235610-mRNA-1:five_prime_utr;Parent=Msa1235610-mRNA-1 |
chr8_2 | CDS | 13729184 | 13729429 | 13729184 | ID=Msa1235610-mRNA-1:cds;Parent=Msa1235610-mRNA-1 |
chr8_2 | CDS | 13729007 | 13729087 | 13729007 | ID=Msa1235610-mRNA-1:cds;Parent=Msa1235610-mRNA-1 |
chr8_2 | CDS | 13726610 | 13726705 | 13726610 | ID=Msa1235610-mRNA-1:cds;Parent=Msa1235610-mRNA-1 |
chr8_2 | CDS | 13726327 | 13726410 | 13726327 | ID=Msa1235610-mRNA-1:cds;Parent=Msa1235610-mRNA-1 |
chr8_2 | CDS | 13726161 | 13726230 | 13726161 | ID=Msa1235610-mRNA-1:cds;Parent=Msa1235610-mRNA-1 |
chr8_2 | CDS | 13725986 | 13726068 | 13725986 | ID=Msa1235610-mRNA-1:cds;Parent=Msa1235610-mRNA-1 |
chr8_2 | CDS | 13725478 | 13725557 | 13725478 | ID=Msa1235610-mRNA-1:cds;Parent=Msa1235610-mRNA-1 |
chr8_2 | CDS | 13725054 | 13725152 | 13725054 | ID=Msa1235610-mRNA-1:cds;Parent=Msa1235610-mRNA-1 |
chr8_2 | CDS | 13724861 | 13724969 | 13724861 | ID=Msa1235610-mRNA-1:cds;Parent=Msa1235610-mRNA-1 |
chr8_2 | CDS | 13723916 | 13724005 | 13723916 | ID=Msa1235610-mRNA-1:cds;Parent=Msa1235610-mRNA-1 |
chr8_2 | CDS | 13723760 | 13723798 | 13723760 | ID=Msa1235610-mRNA-1:cds;Parent=Msa1235610-mRNA-1 |
chr8_2 | three_prime_UTR | 13723621 | 13723759 | 13723621 | ID=Msa1235610-mRNA-1:three_prime_utr;Parent=Msa1235610-mRNA-1 |
Gene Sequence |
Protein sequence |