Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0120880 | XP_013468062.1 | 99.120 | 341 | 3 | 0 | 1 | 341 | 1 | 341 | 0.0 | 701 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0120880 | sp|Q9LUG5|RPF2_ARATH | 71.246 | 313 | 88 | 2 | 28 | 340 | 3 | 313 | 6.41e-158 | 447 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0120880 | I3SPQ7 | 99.120 | 341 | 3 | 0 | 1 | 341 | 1 | 341 | 0.0 | 701 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008200 | Msa0120880 | 0.841003 | 6.182451e-58 | -8.615850e-47 |
| Msa0010110 | Msa0120880 | 0.832453 | 9.373932e-56 | -8.615850e-47 |
| Msa0010490 | Msa0120880 | 0.813375 | 2.641895e-51 | -8.615850e-47 |
| Msa0020390 | Msa0120880 | 0.845283 | 4.474316e-59 | -8.615850e-47 |
| Msa0024930 | Msa0120880 | 0.821638 | 3.630355e-53 | -8.615850e-47 |
| Msa0032810 | Msa0120880 | 0.830517 | 2.808870e-55 | -8.615850e-47 |
| Msa0036540 | Msa0120880 | 0.803574 | 3.266713e-49 | -8.615850e-47 |
| Msa0046110 | Msa0120880 | -0.800242 | 1.579764e-48 | -8.615850e-47 |
| Msa0059040 | Msa0120880 | 0.818958 | 1.493416e-52 | -8.615850e-47 |
| Msa0059110 | Msa0120880 | 0.802352 | 5.842526e-49 | -8.615850e-47 |
| Msa0059840 | Msa0120880 | 0.841710 | 4.028731e-58 | -8.615850e-47 |
| Msa0067590 | Msa0120880 | -0.836720 | 7.928854e-57 | -8.615850e-47 |
| Msa0072420 | Msa0120880 | 0.901302 | 3.075064e-78 | -8.615850e-47 |
| Msa0090520 | Msa0120880 | 0.829534 | 4.878868e-55 | -8.615850e-47 |
| Msa0104670 | Msa0120880 | 0.838987 | 2.073821e-57 | -8.615850e-47 |
| Msa0105370 | Msa0120880 | 0.805903 | 1.066119e-49 | -8.615850e-47 |
| Msa0106710 | Msa0120880 | 0.800787 | 1.223429e-48 | -8.615850e-47 |
| Msa0116380 | Msa0120880 | 0.829875 | 4.030465e-55 | -8.615850e-47 |
| Msa0119900 | Msa0120880 | 0.817464 | 3.253396e-52 | -8.615850e-47 |
| Msa0120520 | Msa0120880 | 0.807715 | 4.415490e-50 | -8.615850e-47 |
| Msa0120880 | Msa0137990 | 0.832602 | 8.608856e-56 | -8.615850e-47 |
| Msa0120880 | Msa0140770 | -0.841459 | 4.691065e-58 | -8.615850e-47 |
| Msa0120880 | Msa0148080 | 0.819982 | 8.723000e-53 | -8.615850e-47 |
| Msa0120880 | Msa0149440 | 0.854283 | 1.364629e-61 | -8.615850e-47 |
| Msa0120880 | Msa0150860 | 0.824306 | 8.668413e-54 | -8.615850e-47 |
| Msa0120880 | Msa0156760 | 0.810974 | 8.825303e-51 | -8.615850e-47 |
| Msa0120880 | Msa0167980 | 0.809106 | 2.229590e-50 | -8.615850e-47 |
| Msa0120880 | Msa0173800 | 0.834617 | 2.703072e-56 | -8.615850e-47 |
| Msa0120880 | Msa0183850 | 0.807371 | 5.223416e-50 | -8.615850e-47 |
| Msa0120880 | Msa0183900 | 0.822606 | 2.164926e-53 | -8.615850e-47 |
| Msa0120880 | Msa0188350 | 0.827435 | 1.567239e-54 | -8.615850e-47 |
| Msa0120880 | Msa0194920 | 0.822923 | 1.827257e-53 | -8.615850e-47 |
| Msa0120880 | Msa0199290 | 0.814341 | 1.618751e-51 | -8.615850e-47 |
| Msa0120880 | Msa0202410 | 0.814939 | 1.193386e-51 | -8.615850e-47 |
| Msa0120880 | Msa0204960 | 0.909678 | 4.364934e-82 | -8.615850e-47 |
| Msa0120880 | Msa0206690 | 0.825020 | 5.886519e-54 | -8.615850e-47 |
| Msa0120880 | Msa0207670 | 0.822378 | 2.446327e-53 | -8.615850e-47 |
| Msa0120880 | Msa0209140 | 0.801642 | 8.176653e-49 | -8.615850e-47 |
| Msa0120880 | Msa0209350 | 0.810623 | 1.051178e-50 | -8.615850e-47 |
| Msa0120880 | Msa0209500 | 0.805659 | 1.199649e-49 | -8.615850e-47 |
| Msa0120880 | Msa0214550 | 0.810384 | 1.184245e-50 | -8.615850e-47 |
| Msa0120880 | Msa0215990 | 0.828039 | 1.121853e-54 | -8.615850e-47 |
| Msa0120880 | Msa0217670 | 0.833904 | 4.078266e-56 | -8.615850e-47 |
| Msa0120880 | Msa0220990 | 0.804837 | 1.783352e-49 | -8.615850e-47 |
| Msa0120880 | Msa0223330 | 0.811145 | 8.105947e-51 | -8.615850e-47 |
| Msa0120880 | Msa0232790 | 0.814495 | 1.496179e-51 | -8.615850e-47 |
| Msa0120880 | Msa0233370 | 0.813381 | 2.634672e-51 | -8.615850e-47 |
| Msa0120880 | Msa0240900 | 0.852873 | 3.468569e-61 | -8.615850e-47 |
| Msa0120880 | Msa0244980 | 0.821449 | 4.014139e-53 | -8.615850e-47 |
| Msa0120880 | Msa0245430 | 0.818087 | 2.353090e-52 | -8.615850e-47 |
| Msa0120880 | Msa0249310 | 0.800161 | 1.641037e-48 | -8.615850e-47 |
| Msa0120880 | Msa0249580 | 0.846740 | 1.795928e-59 | -8.615850e-47 |
| Msa0120880 | Msa0256140 | 0.815422 | 9.321569e-52 | -8.615850e-47 |
| Msa0120880 | Msa0257490 | 0.865162 | 7.211134e-65 | -8.615850e-47 |
| Msa0120880 | Msa0258390 | 0.856878 | 2.388096e-62 | -8.615850e-47 |
| Msa0120880 | Msa0261170 | 0.819473 | 1.139962e-52 | -8.615850e-47 |
| Msa0120880 | Msa0272300 | 0.807160 | 5.789704e-50 | -8.615850e-47 |
| Msa0120880 | Msa0274720 | 0.806153 | 9.443505e-50 | -8.615850e-47 |
| Msa0120880 | Msa0275360 | 0.818752 | 1.663643e-52 | -8.615850e-47 |
| Msa0120880 | Msa0281530 | 0.904384 | 1.299075e-79 | -8.615850e-47 |
| Msa0120880 | Msa0283420 | 0.816267 | 6.039539e-52 | -8.615850e-47 |
| Msa0120880 | Msa0288080 | 0.803970 | 2.703934e-49 | -8.615850e-47 |
| Msa0120880 | Msa0295460 | -0.813990 | 1.934975e-51 | -8.615850e-47 |
| Msa0120880 | Msa0296250 | 0.816891 | 4.377156e-52 | -8.615850e-47 |
| Msa0120880 | Msa0296630 | -0.812382 | 4.360405e-51 | -8.615850e-47 |
| Msa0120880 | Msa0296790 | 0.844818 | 5.974734e-59 | -8.615850e-47 |
| Msa0120880 | Msa0297610 | 0.847191 | 1.351797e-59 | -8.615850e-47 |
| Msa0120880 | Msa0317910 | 0.803531 | 3.334479e-49 | -8.615850e-47 |
| Msa0120880 | Msa0317970 | 0.846395 | 2.231400e-59 | -8.615850e-47 |
| Msa0120880 | Msa0320590 | 0.848977 | 4.344998e-60 | -8.615850e-47 |
| Msa0120880 | Msa0321690 | 0.818475 | 1.922927e-52 | -8.615850e-47 |
| Msa0120880 | Msa0322240 | 0.842324 | 2.772475e-58 | -8.615850e-47 |
| Msa0120880 | Msa0326480 | 0.844650 | 6.629169e-59 | -8.615850e-47 |
| Msa0120880 | Msa0335730 | 0.803795 | 2.938909e-49 | -8.615850e-47 |
| Msa0120880 | Msa0336450 | 0.802997 | 4.302084e-49 | -8.615850e-47 |
| Msa0120880 | Msa0337710 | 0.832184 | 1.092450e-55 | -8.615850e-47 |
| Msa0120880 | Msa0339910 | 0.807785 | 4.265710e-50 | -8.615850e-47 |
| Msa0120880 | Msa0343500 | 0.881908 | 1.622984e-70 | -8.615850e-47 |
| Msa0120880 | Msa0357900 | 0.857005 | 2.190606e-62 | -8.615850e-47 |
| Msa0120880 | Msa0369610 | 0.805510 | 1.289262e-49 | -8.615850e-47 |
| Msa0120880 | Msa0377820 | 0.831740 | 1.406443e-55 | -8.615850e-47 |
| Msa0120880 | Msa0382370 | 0.812338 | 4.458140e-51 | -8.615850e-47 |
| Msa0120880 | Msa0385500 | 0.869600 | 2.742430e-66 | -8.615850e-47 |
| Msa0120880 | Msa0417030 | 0.817309 | 3.525109e-52 | -8.615850e-47 |
| Msa0120880 | Msa0419720 | 0.804842 | 1.778655e-49 | -8.615850e-47 |
| Msa0120880 | Msa0426580 | 0.873737 | 1.165818e-67 | -8.615850e-47 |
| Msa0120880 | Msa0437020 | 0.894069 | 3.485864e-75 | -8.615850e-47 |
| Msa0120880 | Msa0450400 | -0.857099 | 2.056246e-62 | -8.615850e-47 |
| Msa0120880 | Msa0456060 | 0.809720 | 1.646146e-50 | -8.615850e-47 |
| Msa0120880 | Msa0462600 | 0.809448 | 1.882654e-50 | -8.615850e-47 |
| Msa0120880 | Msa0463850 | 0.821915 | 3.131620e-53 | -8.615850e-47 |
| Msa0120880 | Msa0472930 | 0.827635 | 1.403274e-54 | -8.615850e-47 |
| Msa0120880 | Msa0479760 | -0.834393 | 3.076195e-56 | -8.615850e-47 |
| Msa0120880 | Msa0481970 | 0.807999 | 3.840809e-50 | -8.615850e-47 |
| Msa0120880 | Msa0511770 | 0.812141 | 4.921331e-51 | -8.615850e-47 |
| Msa0120880 | Msa0517590 | 0.864197 | 1.445424e-64 | -8.615850e-47 |
| Msa0120880 | Msa0521010 | 0.800679 | 1.286921e-48 | -8.615850e-47 |
| Msa0120880 | Msa0523430 | -0.848169 | 7.273985e-60 | -8.615850e-47 |
| Msa0120880 | Msa0523490 | -0.804133 | 2.500027e-49 | -8.615850e-47 |
| Msa0120880 | Msa0527540 | 0.824542 | 7.628548e-54 | -8.615850e-47 |
| Msa0120880 | Msa0531230 | 0.828140 | 1.060891e-54 | -8.615850e-47 |
| Msa0120880 | Msa0531650 | 0.814302 | 1.650918e-51 | -8.615850e-47 |
| Msa0120880 | Msa0536350 | 0.807332 | 5.322551e-50 | -8.615850e-47 |
| Msa0120880 | Msa0542290 | 0.833051 | 6.659217e-56 | -8.615850e-47 |
| Msa0120880 | Msa0542560 | 0.821448 | 4.015483e-53 | -8.615850e-47 |
| Msa0120880 | Msa0547160 | 0.807565 | 4.751239e-50 | -8.615850e-47 |
| Msa0120880 | Msa0549450 | 0.833838 | 4.238114e-56 | -8.615850e-47 |
| Msa0120880 | Msa0549950 | 0.804127 | 2.507584e-49 | -8.615850e-47 |
| Msa0120880 | Msa0556060 | 0.818346 | 2.056216e-52 | -8.615850e-47 |
| Msa0120880 | Msa0576120 | -0.813303 | 2.740821e-51 | -8.615850e-47 |
| Msa0120880 | Msa0581110 | 0.831425 | 1.681505e-55 | -8.615850e-47 |
| Msa0120880 | Msa0581280 | 0.844381 | 7.831826e-59 | -8.615850e-47 |
| Msa0120880 | Msa0583360 | -0.826031 | 3.389672e-54 | -8.615850e-47 |
| Msa0120880 | Msa0588260 | 0.823042 | 1.714174e-53 | -8.615850e-47 |
| Msa0120880 | Msa0588360 | 0.817333 | 3.482005e-52 | -8.615850e-47 |
| Msa0120880 | Msa0600080 | 0.815488 | 9.010215e-52 | -8.615850e-47 |
| Msa0120880 | Msa0604290 | 0.833232 | 6.000829e-56 | -8.615850e-47 |
| Msa0120880 | Msa0615580 | 0.822652 | 2.112736e-53 | -8.615850e-47 |
| Msa0120880 | Msa0617170 | 0.818976 | 1.479810e-52 | -8.615850e-47 |
| Msa0120880 | Msa0626630 | 0.800102 | 1.686662e-48 | -8.615850e-47 |
| Msa0120880 | Msa0634680 | 0.810306 | 1.230864e-50 | -8.615850e-47 |
| Msa0120880 | Msa0637930 | -0.802261 | 6.101003e-49 | -8.615850e-47 |
| Msa0120880 | Msa0642160 | 0.811252 | 7.683978e-51 | -8.615850e-47 |
| Msa0120880 | Msa0642970 | 0.824944 | 6.133889e-54 | -8.615850e-47 |
| Msa0120880 | Msa0645530 | 0.807054 | 6.096115e-50 | -8.615850e-47 |
| Msa0120880 | Msa0646020 | 0.801825 | 7.499554e-49 | -8.615850e-47 |
| Msa0120880 | Msa0646420 | 0.804586 | 2.011653e-49 | -8.615850e-47 |
| Msa0120880 | Msa0648780 | 0.803441 | 3.481673e-49 | -8.615850e-47 |
| Msa0120880 | Msa0651560 | 0.814854 | 1.245929e-51 | -8.615850e-47 |
| Msa0120880 | Msa0661830 | 0.815025 | 1.141930e-51 | -8.615850e-47 |
| Msa0120880 | Msa0662220 | 0.804483 | 2.113558e-49 | -8.615850e-47 |
| Msa0120880 | Msa0664560 | 0.803635 | 3.172780e-49 | -8.615850e-47 |
| Msa0120880 | Msa0664750 | 0.802629 | 5.122597e-49 | -8.615850e-47 |
| Msa0120880 | Msa0665100 | 0.801304 | 9.593352e-49 | -8.615850e-47 |
| Msa0120880 | Msa0665280 | 0.800710 | 1.268402e-48 | -8.615850e-47 |
| Msa0120880 | Msa0665530 | -0.813149 | 2.962183e-51 | -8.615850e-47 |
| Msa0120880 | Msa0671210 | 0.808889 | 2.480506e-50 | -8.615850e-47 |
| Msa0120880 | Msa0672550 | 0.817377 | 3.403351e-52 | -8.615850e-47 |
| Msa0120880 | Msa0679030 | 0.827578 | 1.448231e-54 | -8.615850e-47 |
| Msa0120880 | Msa0682680 | 0.818689 | 1.718933e-52 | -8.615850e-47 |
| Msa0120880 | Msa0685090 | 0.808605 | 2.853016e-50 | -8.615850e-47 |
| Msa0120880 | Msa0686950 | -0.801324 | 9.500961e-49 | -8.615850e-47 |
| Msa0120880 | Msa0689440 | 0.850207 | 1.971598e-60 | -8.615850e-47 |
| Msa0120880 | Msa0693330 | 0.803798 | 2.934769e-49 | -8.615850e-47 |
| Msa0120880 | Msa0694140 | 0.801424 | 9.065472e-49 | -8.615850e-47 |
| Msa0120880 | Msa0697680 | 0.818113 | 2.321667e-52 | -8.615850e-47 |
| Msa0120880 | Msa0698540 | 0.812066 | 5.111034e-51 | -8.615850e-47 |
| Msa0120880 | Msa0707250 | 0.812941 | 3.290519e-51 | -8.615850e-47 |
| Msa0120880 | Msa0741440 | 0.825387 | 4.820593e-54 | -8.615850e-47 |
| Msa0120880 | Msa0752700 | 0.808908 | 2.457852e-50 | -8.615850e-47 |
| Msa0120880 | Msa0765080 | 0.810660 | 1.031918e-50 | -8.615850e-47 |
| Msa0120880 | Msa0794970 | 0.805982 | 1.026379e-49 | -8.615850e-47 |
| Msa0120880 | Msa0796580 | -0.813853 | 2.074621e-51 | -8.615850e-47 |
| Msa0120880 | Msa0800370 | 0.836096 | 1.143273e-56 | -8.615850e-47 |
| Msa0120880 | Msa0822500 | 0.833118 | 6.408370e-56 | -8.615850e-47 |
| Msa0120880 | Msa0826150 | 0.806717 | 7.182640e-50 | -8.615850e-47 |
| Msa0120880 | Msa0827520 | -0.801954 | 7.054616e-49 | -8.615850e-47 |
| Msa0120880 | Msa0828590 | 0.810102 | 1.362070e-50 | -8.615850e-47 |
| Msa0120880 | Msa0831100 | 0.818880 | 1.556222e-52 | -8.615850e-47 |
| Msa0120880 | Msa0833530 | 0.801734 | 7.829501e-49 | -8.615850e-47 |
| Msa0120880 | Msa0833950 | -0.800895 | 1.163033e-48 | -8.615850e-47 |
| Msa0120880 | Msa0865030 | 0.804772 | 1.840074e-49 | -8.615850e-47 |
| Msa0120880 | Msa0878860 | 0.825334 | 4.959863e-54 | -8.615850e-47 |
| Msa0120880 | Msa0880730 | 0.800615 | 1.326333e-48 | -8.615850e-47 |
| Msa0120880 | Msa0881530 | -0.831547 | 1.569542e-55 | -8.615850e-47 |
| Msa0120880 | Msa0892640 | 0.853199 | 2.798845e-61 | -8.615850e-47 |
| Msa0120880 | Msa0921000 | 0.807883 | 4.065420e-50 | -8.615850e-47 |
| Msa0120880 | Msa0933380 | 0.856426 | 3.244235e-62 | -8.615850e-47 |
| Msa0120880 | Msa0933760 | 0.800415 | 1.456843e-48 | -8.615850e-47 |
| Msa0120880 | Msa0934140 | 0.820162 | 7.935397e-53 | -8.615850e-47 |
| Msa0120880 | Msa0944200 | 0.823917 | 1.069955e-53 | -8.615850e-47 |
| Msa0120880 | Msa0958000 | 0.889101 | 3.272600e-73 | -8.615850e-47 |
| Msa0120880 | Msa0971160 | 0.843362 | 1.468561e-58 | -8.615850e-47 |
| Msa0120880 | Msa0974950 | 0.811830 | 5.751974e-51 | -8.615850e-47 |
| Msa0120880 | Msa0980540 | 0.807609 | 4.648522e-50 | -8.615850e-47 |
| Msa0120880 | Msa0982090 | -0.833702 | 4.581594e-56 | -8.615850e-47 |
| Msa0120880 | Msa1002960 | 0.819398 | 1.186097e-52 | -8.615850e-47 |
| Msa0120880 | Msa1012740 | 0.820363 | 7.137483e-53 | -8.615850e-47 |
| Msa0120880 | Msa1021520 | 0.872741 | 2.519151e-67 | -8.615850e-47 |
| Msa0120880 | Msa1037520 | 0.801678 | 8.039595e-49 | -8.615850e-47 |
| Msa0120880 | Msa1059300 | 0.857365 | 1.715539e-62 | -8.615850e-47 |
| Msa0120880 | Msa1060260 | 0.846416 | 2.201558e-59 | -8.615850e-47 |
| Msa0120880 | Msa1085610 | -0.810497 | 1.119499e-50 | -8.615850e-47 |
| Msa0120880 | Msa1089320 | 0.817645 | 2.962130e-52 | -8.615850e-47 |
| Msa0120880 | Msa1089450 | 0.849899 | 2.404536e-60 | -8.615850e-47 |
| Msa0120880 | Msa1105510 | 0.849972 | 2.293091e-60 | -8.615850e-47 |
| Msa0120880 | Msa1118860 | 0.802871 | 4.567770e-49 | -8.615850e-47 |
| Msa0120880 | Msa1123770 | 0.901356 | 2.909527e-78 | -8.615850e-47 |
| Msa0120880 | Msa1123780 | 0.806218 | 9.151146e-50 | -8.615850e-47 |
| Msa0120880 | Msa1126830 | 0.828203 | 1.024464e-54 | -8.615850e-47 |
| Msa0120880 | Msa1128270 | 0.857514 | 1.549711e-62 | -8.615850e-47 |
| Msa0120880 | Msa1128280 | 0.858043 | 1.079852e-62 | -8.615850e-47 |
| Msa0120880 | Msa1128600 | 0.807376 | 5.208983e-50 | -8.615850e-47 |
| Msa0120880 | Msa1143370 | -0.830225 | 3.309777e-55 | -8.615850e-47 |
| Msa0120880 | Msa1148910 | 0.813963 | 1.961137e-51 | -8.615850e-47 |
| Msa0120880 | Msa1165270 | 0.858204 | 9.669961e-63 | -8.615850e-47 |
| Msa0120880 | Msa1165780 | 0.840541 | 8.171849e-58 | -8.615850e-47 |
| Msa0120880 | Msa1169910 | 0.899799 | 1.385139e-77 | -8.615850e-47 |
| Msa0120880 | Msa1174780 | 0.814285 | 1.665261e-51 | -8.615850e-47 |
| Msa0120880 | Msa1175200 | 0.826074 | 3.312292e-54 | -8.615850e-47 |
| Msa0120880 | Msa1175350 | 0.821130 | 4.755898e-53 | -8.615850e-47 |
| Msa0120880 | Msa1176170 | 0.811853 | 5.688770e-51 | -8.615850e-47 |
| Msa0120880 | Msa1184230 | 0.826983 | 2.010582e-54 | -8.615850e-47 |
| Msa0120880 | Msa1190100 | -0.816848 | 4.476555e-52 | -8.615850e-47 |
| Msa0120880 | Msa1209200 | 0.831214 | 1.895372e-55 | -8.615850e-47 |
| Msa0120880 | Msa1209440 | 0.800055 | 1.724315e-48 | -8.615850e-47 |
| Msa0120880 | Msa1211420 | -0.808041 | 3.762489e-50 | -8.615850e-47 |
| Msa0120880 | Msa1216260 | 0.800067 | 1.714938e-48 | -8.615850e-47 |
| Msa0120880 | Msa1218500 | 0.804752 | 1.857428e-49 | -8.615850e-47 |
| Msa0120880 | Msa1225860 | -0.826521 | 2.591402e-54 | -8.615850e-47 |
| Msa0120880 | Msa1235610 | 0.821903 | 3.152215e-53 | -8.615850e-47 |
| Msa0120880 | Msa1254730 | 0.827164 | 1.819773e-54 | -8.615850e-47 |
| Msa0120880 | Msa1258030 | -0.824242 | 8.976171e-54 | -8.615850e-47 |
| Msa0120880 | Msa1262890 | 0.833720 | 4.535349e-56 | -8.615850e-47 |
| Msa0120880 | Msa1264210 | 0.801735 | 7.824843e-49 | -8.615850e-47 |
| Msa0120880 | Msa1265590 | 0.821746 | 3.428067e-53 | -8.615850e-47 |
| Msa0120880 | Msa1271130 | 0.836353 | 9.836958e-57 | -8.615850e-47 |
| Msa0120880 | Msa1275680 | 0.848304 | 6.673640e-60 | -8.615850e-47 |
| Msa0120880 | Msa1277260 | 0.835843 | 1.324979e-56 | -8.615850e-47 |
| Msa0120880 | Msa1294820 | 0.800423 | 1.451175e-48 | -8.615850e-47 |
| Msa0120880 | Msa1307160 | 0.803864 | 2.843483e-49 | -8.615850e-47 |
| Msa0120880 | Msa1307180 | 0.827776 | 1.297489e-54 | -8.615850e-47 |
| Msa0120880 | Msa1308220 | 0.820629 | 6.200245e-53 | -8.615850e-47 |
| Msa0120880 | Msa1315890 | 0.870959 | 9.832686e-67 | -8.615850e-47 |
| Msa0120880 | Msa1316360 | 0.837147 | 6.170989e-57 | -8.615850e-47 |
| Msa0120880 | Msa1325410 | -0.802939 | 4.422348e-49 | -8.615850e-47 |
| Msa0120880 | Msa1329730 | 0.829232 | 5.776651e-55 | -8.615850e-47 |
| Msa0120880 | Msa1329750 | 0.837329 | 5.541523e-57 | -8.615850e-47 |
| Msa0120880 | Msa1330540 | -0.810853 | 9.374818e-51 | -8.615850e-47 |
| Msa0120880 | Msa1332590 | 0.823982 | 1.032689e-53 | -8.615850e-47 |
| Msa0120880 | Msa1336560 | 0.833285 | 5.821479e-56 | -8.615850e-47 |
| Msa0120880 | Msa1340200 | 0.832283 | 1.032613e-55 | -8.615850e-47 |
| Msa0120880 | Msa1341060 | 0.825822 | 3.801571e-54 | -8.615850e-47 |
| Msa0120880 | Msa1342630 | 0.805770 | 1.137260e-49 | -8.615850e-47 |
| Msa0120880 | Msa1342960 | -0.809581 | 1.762950e-50 | -8.615850e-47 |
| Msa0120880 | Msa1346840 | 0.807637 | 4.585971e-50 | -8.615850e-47 |
| Msa0120880 | Msa1351540 | 0.855215 | 7.324618e-62 | -8.615850e-47 |
| Msa0120880 | Msa1364210 | 0.816977 | 4.187582e-52 | -8.615850e-47 |
| Msa0120880 | Msa1364350 | -0.822004 | 2.986302e-53 | -8.615850e-47 |
| Msa0120880 | Msa1365430 | 0.811525 | 6.701776e-51 | -8.615850e-47 |
| Msa0120880 | Msa1365800 | 0.802512 | 5.416200e-49 | -8.615850e-47 |
| Msa0120880 | Msa1372770 | -0.803731 | 3.030925e-49 | -8.615850e-47 |
| Msa0120880 | Msa1381350 | 0.819501 | 1.123494e-52 | -8.615850e-47 |
| Msa0120880 | Msa1382380 | -0.836358 | 9.807978e-57 | -8.615850e-47 |
| Msa0120880 | Msa1385720 | 0.901808 | 1.841744e-78 | -8.615850e-47 |
| Msa0120880 | Msa1385730 | 0.802150 | 6.429957e-49 | -8.615850e-47 |
| Msa0120880 | Msa1407190 | 0.806867 | 6.678717e-50 | -8.615850e-47 |
| Msa0120880 | Msa1411970 | 0.838112 | 3.488957e-57 | -8.615850e-47 |
| Msa0120880 | Msa1419870 | 0.800600 | 1.335540e-48 | -8.615850e-47 |
| Msa0120880 | Msa1434090 | 0.907979 | 2.820354e-81 | -8.615850e-47 |
| Msa0120880 | Msa1435390 | 0.862128 | 6.309279e-64 | -8.615850e-47 |
| Msa0120880 | Msa1440310 | 0.803572 | 3.270645e-49 | -8.615850e-47 |
| Msa0120880 | Msa1440930 | 0.844756 | 6.208054e-59 | -8.615850e-47 |
| Msa0120880 | Msa1452710 | 0.813233 | 2.838515e-51 | -8.615850e-47 |
| Msa0120880 | Msa1454680 | 0.834279 | 3.285590e-56 | -8.615850e-47 |
| Msa0120880 | Msa1464090 | 0.809758 | 1.614933e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0120880 | MtrunA17_Chr1g0179301 | 99.120 | 341 | 3 | 0 | 1 | 341 | 1 | 341 | 0.0 | 701 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0120880 | AT3G23620.1 | 71.246 | 313 | 88 | 2 | 28 | 340 | 3 | 313 | 6.51e-159 | 447 |
Find 98 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGATTGCAGTCTCTTTC+TGG | 0.136562 | 1_3:-46124303 | Msa0120880:intron |
| TGAGGGCGAGTTTGCCCTTA+TGG | 0.218905 | 1_3:+46124603 | None:intergenic |
| GTAATGATGGTTACGAGTTT+TGG | 0.263003 | 1_3:+46124569 | None:intergenic |
| ACATTATGCTTACAATTAAA+TGG | 0.265469 | 1_3:+46120818 | None:intergenic |
| ATTAATGAACGTATTAAAAT+AGG | 0.271829 | 1_3:+46120724 | None:intergenic |
| ATGTTCTGATATACTTTATA+AGG | 0.271920 | 1_3:+46120640 | None:intergenic |
| ACTTCTACCAATTCCATTCT+TGG | 0.274683 | 1_3:+46121472 | None:intergenic |
| GTTTCTGCTGCTTGGCTTCT+CGG | 0.282208 | 1_3:+46121044 | None:intergenic |
| CATTTCCAATCTTTCCTTGT+AGG | 0.311357 | 1_3:+46121236 | None:intergenic |
| AGTTGGTCCTTCCATGGATA+TGG | 0.326164 | 1_3:-46121452 | Msa0120880:CDS |
| GTTCAAAACCGCACTCGTTT+TGG | 0.326227 | 1_3:+46124448 | None:intergenic |
| TCCCCAATGAAAGCCATAAA+AGG | 0.334452 | 1_3:+46121767 | None:intergenic |
| AGCTGGTGGTGAAACCTCTT+TGG | 0.334516 | 1_3:-46124342 | Msa0120880:CDS |
| CAAAGAGAAGACCTTCGTTT+TGG | 0.335324 | 1_3:+46124741 | None:intergenic |
| GAGGGCGAGTTTGCCCTTAT+GGG | 0.337355 | 1_3:+46124604 | None:intergenic |
| AAGGGACAAGCCAAAGAAAA+AGG | 0.337552 | 1_3:-46121371 | Msa0120880:intron |
| AAAGGCTTTGATCCTTCCTT+TGG | 0.354826 | 1_3:+46121785 | None:intergenic |
| AAGAAAACGTTGTTGCTTCA+TGG | 0.355781 | 1_3:-46124473 | Msa0120880:CDS |
| GTGGAGAATTTAAATCTTGC+CGG | 0.361028 | 1_3:-46121589 | Msa0120880:CDS |
| ACTCCCATGTTTCTGCTGCT+TGG | 0.361871 | 1_3:+46121036 | None:intergenic |
| CTCCCGAGAACAAGGTTATT+AGG | 0.367924 | 1_3:+46121899 | None:intergenic |
| AATTGTTTAGATTGGAGAAA+TGG | 0.368193 | 1_3:-46121104 | Msa0120880:intron |
| TTCACTCCTTTCGATTTATT+AGG | 0.370859 | 1_3:+46121076 | None:intergenic |
| ATAGGAGAAGAATGTCAAAA+AGG | 0.389857 | 1_3:-46121263 | Msa0120880:intron |
| TCCTTCATCACACTTTCATT+AGG | 0.397326 | 1_3:+46121409 | None:intergenic |
| CTTCTACCAATTCCATTCTT+GGG | 0.402072 | 1_3:+46121473 | None:intergenic |
| GTCCCTCTTACCTTCTGATC+TGG | 0.404383 | 1_3:+46121205 | None:intergenic |
| ATTTCCAATCTTTCCTTGTA+GGG | 0.414052 | 1_3:+46121237 | None:intergenic |
| TACTGCCCTGTCTCCAACTA+AGG | 0.416338 | 1_3:-46121545 | Msa0120880:CDS |
| GATCCCCTACAAGGAAAGAT+TGG | 0.422525 | 1_3:-46121241 | Msa0120880:CDS |
| AGTTGTCCCAAGAATGGAAT+TGG | 0.444927 | 1_3:-46121479 | Msa0120880:CDS |
| GGATAAAGGTCGTCTAAATC+AGG | 0.447679 | 1_3:+46120780 | None:intergenic |
| TTCATTAATTTATGTTCAGA+TGG | 0.447875 | 1_3:-46120710 | Msa0120880:three_prime_UTR |
| AGACCTAATAACCTTGTTCT+CGG | 0.458179 | 1_3:-46121902 | Msa0120880:CDS |
| ACTAATCCACTCGAGGATAA+AGG | 0.460298 | 1_3:+46120766 | None:intergenic |
| TTCAGATGGGTATAGTTTCA+AGG | 0.466774 | 1_3:-46120696 | Msa0120880:three_prime_UTR |
| CAGAACCGCCACAACCCATA+AGG | 0.468050 | 1_3:-46124618 | Msa0120880:CDS |
| TCAGATTTATCATTTGAAGA+AGG | 0.468460 | 1_3:-46124414 | Msa0120880:CDS |
| TCTGAAACTGTGCGGTGTGA+GGG | 0.475218 | 1_3:+46124699 | None:intergenic |
| GAGTTTGCCCTTATGGGTTG+TGG | 0.476342 | 1_3:+46124610 | None:intergenic |
| TGGCACAGTTGTCCCAAGAA+TGG | 0.482338 | 1_3:-46121485 | Msa0120880:CDS |
| CTTTGCTGCCATCTTCGCTA+TGG | 0.485034 | 1_3:-46124723 | Msa0120880:exon |
| TTCATCACACTTTCATTAGG+AGG | 0.486397 | 1_3:+46121412 | None:intergenic |
| TTTATGGCTTTCATTGGGGA+AGG | 0.487396 | 1_3:-46121764 | Msa0120880:CDS |
| GTGAGGGGCCATAGCGAAGA+TGG | 0.490108 | 1_3:+46124715 | None:intergenic |
| TCCTAATGAAAGTGTGATGA+AGG | 0.493736 | 1_3:-46121410 | Msa0120880:CDS |
| GAAGCCAAGCAGCAGAAACA+TGG | 0.494056 | 1_3:-46121040 | Msa0120880:CDS |
| GTTTCACCACCAGCTTCAAA+AGG | 0.496777 | 1_3:+46124350 | None:intergenic |
| TTCTGAAACTGTGCGGTGTG+AGG | 0.506916 | 1_3:+46124698 | None:intergenic |
| TTCATGATCAAAAGACAGGC+AGG | 0.510453 | 1_3:+46120937 | None:intergenic |
| GTCTATGATCTGATAGAAGT+TGG | 0.514759 | 1_3:-46121860 | Msa0120880:CDS |
| GACAGGCAGGGAAAGACAAT+AGG | 0.520590 | 1_3:+46120950 | None:intergenic |
| TCATTAATTTATGTTCAGAT+GGG | 0.524102 | 1_3:-46120709 | Msa0120880:three_prime_UTR |
| ATAAATCGAAAGGAGTGAAG+AGG | 0.524729 | 1_3:-46121072 | Msa0120880:CDS |
| CATACATTCTCCCGAGAACA+AGG | 0.525815 | 1_3:+46121891 | None:intergenic |
| GACCTAATAACCTTGTTCTC+GGG | 0.526089 | 1_3:-46121901 | Msa0120880:CDS |
| AAAACACCTTAGTTGGAGAC+AGG | 0.528374 | 1_3:+46121539 | None:intergenic |
| TATAATTTGATCTACTACAA+TGG | 0.529365 | 1_3:+46120909 | None:intergenic |
| GGTAGAAGTTGGTCCTTCCA+TGG | 0.530363 | 1_3:-46121458 | Msa0120880:CDS |
| CAAAACTCATTCCCTGCAAG+GGG | 0.531812 | 1_3:+46120844 | None:intergenic |
| AGAACCGCCACAACCCATAA+GGG | 0.532404 | 1_3:-46124617 | Msa0120880:CDS |
| AGAATGGAATTGGTAGAAGT+TGG | 0.538211 | 1_3:-46121469 | Msa0120880:CDS |
| AACAAAACTCATTCCCTGCA+AGG | 0.543701 | 1_3:+46120842 | None:intergenic |
| TTTCAGAACCGCCACAATCA+AGG | 0.545213 | 1_3:-46124683 | Msa0120880:CDS |
| TCGCTTCATGATCAAAAGAC+AGG | 0.548955 | 1_3:+46120933 | None:intergenic |
| TTTCATTAGGAGGACGATGC+CGG | 0.551349 | 1_3:+46121422 | None:intergenic |
| GAATTTAAATCTTGCCGGAG+TGG | 0.559897 | 1_3:-46121584 | Msa0120880:CDS |
| TTTCCAATCTTTCCTTGTAG+GGG | 0.560156 | 1_3:+46121238 | None:intergenic |
| CCGGCGAATAACCATATCCA+TGG | 0.560635 | 1_3:+46121441 | None:intergenic |
| TGATAAGAAAATAGCTCCAA+AGG | 0.560881 | 1_3:-46121801 | Msa0120880:CDS |
| AGGAAGCCATGAAAACTTCA+AGG | 0.562762 | 1_3:-46121390 | Msa0120880:CDS |
| TAGATCAAATTATAATACAT+TGG | 0.565915 | 1_3:-46120900 | Msa0120880:three_prime_UTR |
| CCATGGATATGGTTATTCGC+CGG | 0.570411 | 1_3:-46121441 | Msa0120880:CDS |
| ACAAAACTCATTCCCTGCAA+GGG | 0.571624 | 1_3:+46120843 | None:intergenic |
| TGTTTATATTCCAGATCAGA+AGG | 0.574269 | 1_3:-46121215 | Msa0120880:intron |
| AAGCCAAGCAGCAGAAACAT+GGG | 0.578219 | 1_3:-46121039 | Msa0120880:CDS |
| AAGAAAATAGCTCCAAAGGA+AGG | 0.585681 | 1_3:-46121797 | Msa0120880:CDS |
| TAAATCGAAAGGAGTGAAGA+GGG | 0.586006 | 1_3:-46121071 | Msa0120880:CDS |
| GAACGAACTTAAACAGCTGA+AGG | 0.586198 | 1_3:-46121729 | Msa0120880:CDS |
| CTGAAACTGTGCGGTGTGAG+GGG | 0.595983 | 1_3:+46124700 | None:intergenic |
| TACATATGCACGGTCCACTC+CGG | 0.600615 | 1_3:+46121570 | None:intergenic |
| GGCGGTTCTGAATTCAGAGA+AGG | 0.605630 | 1_3:+46124631 | None:intergenic |
| CTTCTATCAGATCATAGACA+TGG | 0.608305 | 1_3:+46121864 | None:intergenic |
| AGACGACCTTTATCCTCGAG+TGG | 0.616955 | 1_3:-46120772 | Msa0120880:three_prime_UTR |
| CGAATAACCATATCCATGGA+AGG | 0.616987 | 1_3:+46121445 | None:intergenic |
| GGAAGCCATGAAAACTTCAA+GGG | 0.623284 | 1_3:-46121389 | Msa0120880:CDS |
| TTTGCCCTTATGGGTTGTGG+CGG | 0.625672 | 1_3:+46124613 | None:intergenic |
| GTGCGCCACCTTGATTGTGG+CGG | 0.646937 | 1_3:+46124675 | None:intergenic |
| TCATGATCAAAAGACAGGCA+GGG | 0.651541 | 1_3:+46120938 | None:intergenic |
| TCATGGAACCAAAACGAGTG+CGG | 0.653161 | 1_3:-46124456 | Msa0120880:CDS |
| AAACACCTTAGTTGGAGACA+GGG | 0.662381 | 1_3:+46121540 | None:intergenic |
| ACCCTAAAACACCAAAACGA+AGG | 0.664314 | 1_3:-46124752 | None:intergenic |
| TGTGTGCGCCACCTTGATTG+TGG | 0.674580 | 1_3:+46124672 | None:intergenic |
| ATTACTCACTAATCCACTCG+AGG | 0.681727 | 1_3:+46120759 | None:intergenic |
| GGGCAGTACATACATATGCA+CGG | 0.685032 | 1_3:+46121560 | None:intergenic |
| CAGAACCGCCACAATCAAGG+TGG | 0.730734 | 1_3:-46124680 | Msa0120880:CDS |
| AAAACTCATTCCCTGCAAGG+GGG | 0.736455 | 1_3:+46120845 | None:intergenic |
| GTGGCGGTTCTGAAACTGTG+CGG | 0.750122 | 1_3:+46124691 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTATAATATAATATTTT+AGG | + | chr1_3:46124406-46124425 | None:intergenic | 0.0% |
| !!! | TTTTTATAGTTTTATGATTA+AGG | - | chr1_3:46121179-46121198 | Msa0120880:intron | 10.0% |
| !! | TATGAAAATAAATTGAAAAA+AGG | - | chr1_3:46123026-46123045 | Msa0120880:intron | 10.0% |
| !! | ATTGAGAAAAATAAAATAAA+AGG | + | chr1_3:46123255-46123274 | None:intergenic | 10.0% |
| !!! | AATTATTTTTTAGATTTAGA+GGG | + | chr1_3:46123329-46123348 | None:intergenic | 10.0% |
| !! | AACTTATAGCTTATATAAAA+TGG | + | chr1_3:46121439-46121458 | None:intergenic | 15.0% |
| !! | TTTAGCTATAAAAATAGTTT+AGG | + | chr1_3:46121649-46121668 | None:intergenic | 15.0% |
| !!! | TTTACTTTTTACCATTTTTA+TGG | - | chr1_3:46121844-46121863 | Msa0120880:CDS | 15.0% |
| !! | TTAAAAAAGTTAGGAATTTA+TGG | - | chr1_3:46121874-46121893 | Msa0120880:CDS | 15.0% |
| !!! | AATTAAGTTGTTTATAAACA+GGG | + | chr1_3:46121983-46122002 | None:intergenic | 15.0% |
| !!! | TAATTAAGTTGTTTATAAAC+AGG | + | chr1_3:46121984-46122003 | None:intergenic | 15.0% |
| !! | TATTATTAAGTCATTACAAT+TGG | - | chr1_3:46122462-46122481 | Msa0120880:intron | 15.0% |
| !!! | ATTATTTTTTAGATTTAGAG+GGG | + | chr1_3:46123328-46123347 | None:intergenic | 15.0% |
| !!! | CAATTATTTTTTAGATTTAG+AGG | + | chr1_3:46123330-46123349 | None:intergenic | 15.0% |
| !! | TAGATCAAATTATAATACAT+TGG | - | chr1_3:46124479-46124498 | Msa0120880:CDS | 15.0% |
| !! | ATTAATGAACGTATTAAAAT+AGG | + | chr1_3:46124658-46124677 | None:intergenic | 15.0% |
| !!! | ATGTTCTAATATATTTTGTT+TGG | + | chr1_3:46124716-46124735 | None:intergenic | 15.0% |
| !! | TATGATTAAGGAATTAGAAT+TGG | - | chr1_3:46121191-46121210 | Msa0120880:intron | 20.0% |
| !!! | GTACATGTTTTAAAAAAGTT+AGG | - | chr1_3:46121303-46121322 | Msa0120880:intron | 20.0% |
| !!! | TTTGAAAATGAGTTGAAAAA+AGG | - | chr1_3:46121735-46121754 | Msa0120880:CDS | 20.0% |
| !!! | TTGAAAATGAGTTGAAAAAA+GGG | - | chr1_3:46121736-46121755 | Msa0120880:CDS | 20.0% |
| !!! | ACATTTTTAGTGAATTACAT+AGG | - | chr1_3:46121817-46121836 | Msa0120880:CDS | 20.0% |
| !! | TTAAAACAAGTCCATAAAAA+TGG | + | chr1_3:46121858-46121877 | None:intergenic | 20.0% |
| !! | ACTTATAGCTTATATGAAAA+TGG | + | chr1_3:46122087-46122106 | None:intergenic | 20.0% |
| !! | CTATTATTCAGACATTTATT+TGG | - | chr1_3:46122397-46122416 | Msa0120880:intron | 20.0% |
| !! | TTAACAAAGGTTCTTAAAAA+TGG | + | chr1_3:46122565-46122584 | None:intergenic | 20.0% |
| !! | AACCTTTGTTAAAATAAGTT+AGG | - | chr1_3:46122573-46122592 | Msa0120880:intron | 20.0% |
| !!! | TTCCTAACTTATTTTAACAA+AGG | + | chr1_3:46122578-46122597 | None:intergenic | 20.0% |
| !!! | AACTTTGTTTTTAAGCTATT+TGG | - | chr1_3:46122602-46122621 | Msa0120880:intron | 20.0% |
| !!! | AATGTTTTTATAAGCTATGT+TGG | - | chr1_3:46122997-46123016 | Msa0120880:intron | 20.0% |
| !!! | TTATTTTTTAGATTTAGAGG+GGG | + | chr1_3:46123327-46123346 | None:intergenic | 20.0% |
| !!! | TCGATTTTAATTGTTTAGAT+TGG | - | chr1_3:46124267-46124286 | Msa0120880:intron | 20.0% |
| !! | TATAATTTGATCTACTACAA+TGG | + | chr1_3:46124473-46124492 | None:intergenic | 20.0% |
| !! | ACATTATGCTTACAATTAAA+TGG | + | chr1_3:46124564-46124583 | None:intergenic | 20.0% |
| !! | TTCATTAATTTATGTTCAGA+TGG | - | chr1_3:46124669-46124688 | Msa0120880:CDS | 20.0% |
| !! | TCATTAATTTATGTTCAGAT+GGG | - | chr1_3:46124670-46124689 | Msa0120880:CDS | 20.0% |
| !! | ATGTTCTGATATACTTTATA+AGG | + | chr1_3:46124742-46124761 | None:intergenic | 20.0% |
| ! | ATGAAAAGATGAAGTAATGA+TGG | + | chr1_3:46120826-46120845 | None:intergenic | 25.0% |
| ! | AATCATGGTGTTTGATTAAA+TGG | + | chr1_3:46120850-46120869 | None:intergenic | 25.0% |
| ! | AAACACAAAAACATGAATCA+TGG | + | chr1_3:46120865-46120884 | None:intergenic | 25.0% |
| !!! | TGTTTTTGTGTTTTTGTTAC+AGG | - | chr1_3:46120872-46120891 | Msa0120880:three_prime_UTR | 25.0% |
| ! | TCAGATTTATCATTTGAAGA+AGG | - | chr1_3:46120965-46120984 | Msa0120880:three_prime_UTR | 25.0% |
| !!! | AATATTAAACCTTTTGAAGC+TGG | - | chr1_3:46121020-46121039 | Msa0120880:CDS | 25.0% |
| !!! | TGAGTTTGTTTTTAAGGTTT+TGG | - | chr1_3:46121131-46121150 | Msa0120880:intron | 25.0% |
| !!! | TTAAGTTGATAATCCAAACA+GGG | + | chr1_3:46121348-46121367 | None:intergenic | 25.0% |
| !!! | ATTAAGTTGATAATCCAAAC+AGG | + | chr1_3:46121349-46121368 | None:intergenic | 25.0% |
| !!! | GTTGTTTTCATTAGCTATTT+TGG | - | chr1_3:46121456-46121475 | Msa0120880:CDS | 25.0% |
| !! | ATTGGTAGTAGATAAGTTTA+AGG | - | chr1_3:46121554-46121573 | Msa0120880:CDS | 25.0% |
| !! | TTGGTAGTAGATAAGTTTAA+GGG | - | chr1_3:46121555-46121574 | Msa0120880:CDS | 25.0% |
| !!! | GTTGTTTTTATAAGCTACAT+TGG | - | chr1_3:46121707-46121726 | Msa0120880:CDS | 25.0% |
| !! | TGAAAAAAGGGTATGAAAAT+TGG | - | chr1_3:46121748-46121767 | Msa0120880:CDS | 25.0% |
| !!! | GGACTTGTTTTAAAAAAGTT+AGG | - | chr1_3:46121865-46121884 | Msa0120880:CDS | 25.0% |
| !!! | GGACTTGTTTTAAAAAAGTT+AGG | - | chr1_3:46121865-46121884 | Msa0120880:CDS | 25.0% |
| !!! | GTTCTTTCTAAAATAGCTAA+TGG | + | chr1_3:46122115-46122134 | None:intergenic | 25.0% |
| ! | AATAGAAAACAACAAGTTTC+GGG | + | chr1_3:46122376-46122395 | None:intergenic | 25.0% |
| ! | CAATAGAAAACAACAAGTTT+CGG | + | chr1_3:46122377-46122396 | None:intergenic | 25.0% |
| ! | TTCTTAAAAATGGTGAAAGT+AGG | + | chr1_3:46122555-46122574 | None:intergenic | 25.0% |
| !! | CCTATTGACATATATTTTGT+GGG | + | chr1_3:46123098-46123117 | None:intergenic | 25.0% |
| !! | ACCTATTGACATATATTTTG+TGG | + | chr1_3:46123099-46123118 | None:intergenic | 25.0% |
| ! | TAGTTAGCAAATCTCAATAT+AGG | - | chr1_3:46123296-46123315 | Msa0120880:intron | 25.0% |
| !!! | AACTCAATTATTTTTCAGAG+GGG | + | chr1_3:46123355-46123374 | None:intergenic | 25.0% |
| !!! | GAACTCAATTATTTTTCAGA+GGG | + | chr1_3:46123356-46123375 | None:intergenic | 25.0% |
| !!! | GTTGGTATTGAAAATTTTAG+AGG | - | chr1_3:46123537-46123556 | Msa0120880:intron | 25.0% |
| !!! | TATTGAAAATTTTAGAGGCA+TGG | - | chr1_3:46123542-46123561 | Msa0120880:intron | 25.0% |
| !!! | AATTGGTTTACCTTTTTCTT+TGG | + | chr1_3:46124021-46124040 | None:intergenic | 25.0% |
| ! | ACTTGAAAGATTTAGAGAAT+TGG | + | chr1_3:46124038-46124057 | None:intergenic | 25.0% |
| ! | AATTGTTTAGATTGGAGAAA+TGG | - | chr1_3:46124275-46124294 | Msa0120880:intron | 25.0% |
| !! | TTTTTGTTACAGGTTGAAAC+TGG | - | chr1_3:46120882-46120901 | Msa0120880:three_prime_UTR | 30.0% |
| !! | TTTTGTTACAGGTTGAAACT+GGG | - | chr1_3:46120883-46120902 | Msa0120880:three_prime_UTR | 30.0% |
| !!! | CGTTGTTGAGTTTGTTTTTA+AGG | - | chr1_3:46121125-46121144 | Msa0120880:intron | 30.0% |
| !!! | GTTTGTTTTTAAGGTTTTGG+TGG | - | chr1_3:46121134-46121153 | Msa0120880:intron | 30.0% |
| ! | TAGGAATTTGAAACCAAACT+AGG | - | chr1_3:46121322-46121341 | Msa0120880:intron | 30.0% |
| CATAAGCTGTTTATTCAAAC+CGG | + | chr1_3:46121581-46121600 | None:intergenic | 30.0% | |
| GTTTGTCATGAAACTGATAT+AGG | - | chr1_3:46121957-46121976 | Msa0120880:intron | 30.0% | |
| !! | GCTGTTTTCACAAGTTATTA+TGG | - | chr1_3:46122210-46122229 | Msa0120880:intron | 30.0% |
| !! | TAGCACTGATAAGACTATTT+GGG | + | chr1_3:46122275-46122294 | None:intergenic | 30.0% |
| !! | TTAGCACTGATAAGACTATT+TGG | + | chr1_3:46122276-46122295 | None:intergenic | 30.0% |
| AAAGTAGGTAAAAACCTTTG+TGG | + | chr1_3:46122540-46122559 | None:intergenic | 30.0% | |
| GTTTGCCATTAAACCAAATT+AGG | - | chr1_3:46122629-46122648 | Msa0120880:intron | 30.0% | |
| ! | TTAAGTTGTTCACCCAAATA+GGG | + | chr1_3:46122655-46122674 | None:intergenic | 30.0% |
| ! | ATTAAGTTGTTCACCCAAAT+AGG | + | chr1_3:46122656-46122675 | None:intergenic | 30.0% |
| ! | TTATGAGCTATAAGCTGTTT+TGG | - | chr1_3:46122735-46122754 | Msa0120880:intron | 30.0% |
| AGACACTTAAACTTATCTAC+TGG | + | chr1_3:46122851-46122870 | None:intergenic | 30.0% | |
| GATAAGTTTAAGTGTCTGTT+TGG | - | chr1_3:46122854-46122873 | Msa0120880:intron | 30.0% | |
| ! | TATATTTTGTGGGACTGTTT+AGG | + | chr1_3:46123088-46123107 | None:intergenic | 30.0% |
| CCCACAAAATATATGTCAAT+AGG | - | chr1_3:46123095-46123114 | Msa0120880:intron | 30.0% | |
| TGAACTGCAATCATAACTAA+GGG | + | chr1_3:46123173-46123192 | None:intergenic | 30.0% | |
| TTAGTTATGATTGCAGTTCA+GGG | - | chr1_3:46123173-46123192 | Msa0120880:intron | 30.0% | |
| !! | GGAACTCAATTATTTTTCAG+AGG | + | chr1_3:46123357-46123376 | None:intergenic | 30.0% |
| GCTCTTACTATGTATGAATA+AGG | + | chr1_3:46123378-46123397 | None:intergenic | 30.0% | |
| TAAGAGCTCCAAATATTACA+TGG | - | chr1_3:46123391-46123410 | Msa0120880:intron | 30.0% | |
| ATCGCTTTCCATGTAATATT+TGG | + | chr1_3:46123402-46123421 | None:intergenic | 30.0% | |
| AGATCCATACTGCAAAATAT+AGG | + | chr1_3:46123445-46123464 | None:intergenic | 30.0% | |
| TGATAAGAAAATAGCTCCAA+AGG | - | chr1_3:46123578-46123597 | Msa0120880:intron | 30.0% | |
| !! | GTTTTACTTGATCTTTTTCG+CGG | - | chr1_3:46123675-46123694 | Msa0120880:intron | 30.0% |
| ! | TCTCTTTCACATTCTTTTGT+TGG | - | chr1_3:46123722-46123741 | Msa0120880:intron | 30.0% |
| !! | GTACTTGTTCTGTTTCTAAT+AGG | - | chr1_3:46124098-46124117 | Msa0120880:intron | 30.0% |
| ATAGGAGAAGAATGTCAAAA+AGG | - | chr1_3:46124116-46124135 | Msa0120880:intron | 30.0% | |
| ATTTCCAATCTTTCCTTGTA+GGG | + | chr1_3:46124145-46124164 | None:intergenic | 30.0% | |
| TGTTTATATTCCAGATCAGA+AGG | - | chr1_3:46124164-46124183 | Msa0120880:intron | 30.0% | |
| ! | GTTTTGCCTAATAAATCGAA+AGG | - | chr1_3:46124297-46124316 | Msa0120880:intron | 30.0% |
| TTCACTCCTTTCGATTTATT+AGG | + | chr1_3:46124306-46124325 | None:intergenic | 30.0% | |
| ! | GTAATGATGGTTACGAGTTT+TGG | + | chr1_3:46120813-46120832 | None:intergenic | 35.0% |
| ! | AAGAAAACGTTGTTGCTTCA+TGG | - | chr1_3:46120906-46120925 | Msa0120880:three_prime_UTR | 35.0% |
| !!! | ATTAAACCTTTTGAAGCTGG+TGG | - | chr1_3:46121023-46121042 | Msa0120880:CDS | 35.0% |
| CAATTCACTTACACAACAAG+AGG | + | chr1_3:46121255-46121274 | None:intergenic | 35.0% | |
| GTTGTGTAAGTGAATTGCAT+AGG | - | chr1_3:46121258-46121277 | Msa0120880:CDS | 35.0% | |
| TAGTAGATAAGTTTAAGGGC+CGG | - | chr1_3:46121559-46121578 | Msa0120880:CDS | 35.0% | |
| AGTCTATCCAAATAAGCTCT+TGG | - | chr1_3:46122318-46122337 | Msa0120880:intron | 35.0% | |
| ATCACAACCAAGAGCTTATT+TGG | + | chr1_3:46122328-46122347 | None:intergenic | 35.0% | |
| TTGGTTGTGATAGTAGATCA+GGG | - | chr1_3:46122337-46122356 | Msa0120880:intron | 35.0% | |
| ! | TAGGGCCTAATTTGGTTTAA+TGG | + | chr1_3:46122637-46122656 | None:intergenic | 35.0% |
| AAACCAAATTAGGCCCTATT+TGG | - | chr1_3:46122639-46122658 | Msa0120880:intron | 35.0% | |
| AACCAAATTAGGCCCTATTT+GGG | - | chr1_3:46122640-46122659 | Msa0120880:intron | 35.0% | |
| !!! | AAGCTGTTTTGGAAAGCTTA+AGG | - | chr1_3:46122746-46122765 | Msa0120880:intron | 35.0% |
| ATGATTACAGAGAGTCTGTT+TGG | + | chr1_3:46123140-46123159 | None:intergenic | 35.0% | |
| CTGAACTGCAATCATAACTA+AGG | + | chr1_3:46123174-46123193 | None:intergenic | 35.0% | |
| CTTAGTTATGATTGCAGTTC+AGG | - | chr1_3:46123172-46123191 | Msa0120880:intron | 35.0% | |
| TAGTTATGATTGCAGTTCAG+GGG | - | chr1_3:46123174-46123193 | Msa0120880:intron | 35.0% | |
| ! | GTTGCCTATATTTTGCAGTA+TGG | - | chr1_3:46123438-46123457 | Msa0120880:intron | 35.0% |
| AGACCTAATAACCTTGTTCT+CGG | - | chr1_3:46123477-46123496 | Msa0120880:intron | 35.0% | |
| CTTCTATCAGATCATAGACA+TGG | + | chr1_3:46123518-46123537 | None:intergenic | 35.0% | |
| GTCTATGATCTGATAGAAGT+TGG | - | chr1_3:46123519-46123538 | Msa0120880:intron | 35.0% | |
| AAGAAAATAGCTCCAAAGGA+AGG | - | chr1_3:46123582-46123601 | Msa0120880:intron | 35.0% | |
| ! | AAGCCTTTTATGGCTTTCAT+TGG | - | chr1_3:46123609-46123628 | Msa0120880:intron | 35.0% |
| ! | AGCCTTTTATGGCTTTCATT+GGG | - | chr1_3:46123610-46123629 | Msa0120880:intron | 35.0% |
| AAGTGATGCATATGATTCAC+AGG | - | chr1_3:46123765-46123784 | Msa0120880:intron | 35.0% | |
| GTGGAGAATTTAAATCTTGC+CGG | - | chr1_3:46123790-46123809 | Msa0120880:intron | 35.0% | |
| TGTGTGAAAAACACCTTAGT+TGG | + | chr1_3:46123850-46123869 | None:intergenic | 35.0% | |
| CTTCTACCAATTCCATTCTT+GGG | + | chr1_3:46123909-46123928 | None:intergenic | 35.0% | |
| ACTTCTACCAATTCCATTCT+TGG | + | chr1_3:46123910-46123929 | None:intergenic | 35.0% | |
| AGAATGGAATTGGTAGAAGT+TGG | - | chr1_3:46123910-46123929 | Msa0120880:intron | 35.0% | |
| TTCATCACACTTTCATTAGG+AGG | + | chr1_3:46123970-46123989 | None:intergenic | 35.0% | |
| ! | TCCTAATGAAAGTGTGATGA+AGG | - | chr1_3:46123969-46123988 | Msa0120880:intron | 35.0% |
| TCCTTCATCACACTTTCATT+AGG | + | chr1_3:46123973-46123992 | None:intergenic | 35.0% | |
| TTTCCAATCTTTCCTTGTAG+GGG | + | chr1_3:46124144-46124163 | None:intergenic | 35.0% | |
| CATTTCCAATCTTTCCTTGT+AGG | + | chr1_3:46124146-46124165 | None:intergenic | 35.0% | |
| ATAAATCGAAAGGAGTGAAG+AGG | - | chr1_3:46124307-46124326 | Msa0120880:CDS | 35.0% | |
| TAAATCGAAAGGAGTGAAGA+GGG | - | chr1_3:46124308-46124327 | Msa0120880:CDS | 35.0% | |
| TTCAGATGGGTATAGTTTCA+AGG | - | chr1_3:46124683-46124702 | Msa0120880:CDS | 35.0% | |
| ! | CAAAGAGAAGACCTTCGTTT+TGG | + | chr1_3:46120641-46120660 | None:intergenic | 40.0% |
| !!! | TTTTGGAGCACGTTTCTTGA+GGG | + | chr1_3:46120796-46120815 | None:intergenic | 40.0% |
| TTGTGCGAAAAACTCCAAAG+AGG | + | chr1_3:46121054-46121073 | None:intergenic | 40.0% | |
| AACTGATTGCAGTCTCTTTC+TGG | - | chr1_3:46121076-46121095 | Msa0120880:CDS | 40.0% | |
| AACAAGCTGAGAACAGCTTA+TGG | - | chr1_3:46121491-46121510 | Msa0120880:CDS | 40.0% | |
| CTTGGTTGTGATAGTAGATC+AGG | - | chr1_3:46122336-46122355 | Msa0120880:intron | 40.0% | |
| TGGTTGTGATAGTAGATCAG+GGG | - | chr1_3:46122338-46122357 | Msa0120880:intron | 40.0% | |
| GTTGTGTAAGTGAACCACAA+AGG | - | chr1_3:46122523-46122542 | Msa0120880:intron | 40.0% | |
| GACCTAATAACCTTGTTCTC+GGG | - | chr1_3:46123478-46123497 | Msa0120880:intron | 40.0% | |
| ! | AAAGGCTTTGATCCTTCCTT+TGG | + | chr1_3:46123597-46123616 | None:intergenic | 40.0% |
| ! | GGAAGGATCAAAGCCTTTTA+TGG | - | chr1_3:46123599-46123618 | Msa0120880:intron | 40.0% |
| ! | GCCTTTTATGGCTTTCATTG+GGG | - | chr1_3:46123611-46123630 | Msa0120880:intron | 40.0% |
| TCCCCAATGAAAGCCATAAA+AGG | + | chr1_3:46123615-46123634 | None:intergenic | 40.0% | |
| TTTATGGCTTTCATTGGGGA+AGG | - | chr1_3:46123615-46123634 | Msa0120880:intron | 40.0% | |
| GAACGAACTTAAACAGCTGA+AGG | - | chr1_3:46123650-46123669 | Msa0120880:intron | 40.0% | |
| TGCATATGATTCACAGGTTG+TGG | - | chr1_3:46123771-46123790 | Msa0120880:intron | 40.0% | |
| GAATTTAAATCTTGCCGGAG+TGG | - | chr1_3:46123795-46123814 | Msa0120880:intron | 40.0% | |
| AAACACCTTAGTTGGAGACA+GGG | + | chr1_3:46123842-46123861 | None:intergenic | 40.0% | |
| AAAACACCTTAGTTGGAGAC+AGG | + | chr1_3:46123843-46123862 | None:intergenic | 40.0% | |
| ! | TTTTCACACACTGTGCATTG+CGG | - | chr1_3:46123860-46123879 | Msa0120880:intron | 40.0% |
| GCATTGCGGTTGAAAAAATC+TGG | - | chr1_3:46123874-46123893 | Msa0120880:intron | 40.0% | |
| AGTTGTCCCAAGAATGGAAT+TGG | - | chr1_3:46123900-46123919 | Msa0120880:intron | 40.0% | |
| CGAATAACCATATCCATGGA+AGG | + | chr1_3:46123937-46123956 | None:intergenic | 40.0% | |
| AGGAAGCCATGAAAACTTCA+AGG | - | chr1_3:46123989-46124008 | Msa0120880:intron | 40.0% | |
| GGAAGCCATGAAAACTTCAA+GGG | - | chr1_3:46123990-46124009 | Msa0120880:intron | 40.0% | |
| ! | CTTGTCCCTTGAAGTTTTCA+TGG | + | chr1_3:46123998-46124017 | None:intergenic | 40.0% |
| AAGGGACAAGCCAAAGAAAA+AGG | - | chr1_3:46124008-46124027 | Msa0120880:intron | 40.0% | |
| ATTCCAGATCAGAAGGTAAG+AGG | - | chr1_3:46124171-46124190 | Msa0120880:intron | 40.0% | |
| TTCCAGATCAGAAGGTAAGA+GGG | - | chr1_3:46124172-46124191 | Msa0120880:intron | 40.0% | |
| TCATGATCAAAAGACAGGCA+GGG | + | chr1_3:46124444-46124463 | None:intergenic | 40.0% | |
| TTCATGATCAAAAGACAGGC+AGG | + | chr1_3:46124445-46124464 | None:intergenic | 40.0% | |
| TCGCTTCATGATCAAAAGAC+AGG | + | chr1_3:46124449-46124468 | None:intergenic | 40.0% | |
| ACAAAACTCATTCCCTGCAA+GGG | + | chr1_3:46124539-46124558 | None:intergenic | 40.0% | |
| AACAAAACTCATTCCCTGCA+AGG | + | chr1_3:46124540-46124559 | None:intergenic | 40.0% | |
| GGATAAAGGTCGTCTAAATC+AGG | + | chr1_3:46124602-46124621 | None:intergenic | 40.0% | |
| ACTAATCCACTCGAGGATAA+AGG | + | chr1_3:46124616-46124635 | None:intergenic | 40.0% | |
| ATTACTCACTAATCCACTCG+AGG | + | chr1_3:46124623-46124642 | None:intergenic | 40.0% | |
| TTTCAGAACCGCCACAATCA+AGG | - | chr1_3:46120696-46120715 | Msa0120880:three_prime_UTR | 45.0% | |
| !!! | GTTTTGGAGCACGTTTCTTG+AGG | + | chr1_3:46120797-46120816 | None:intergenic | 45.0% |
| TCATGGAACCAAAACGAGTG+CGG | - | chr1_3:46120923-46120942 | Msa0120880:three_prime_UTR | 45.0% | |
| ! | GTTCAAAACCGCACTCGTTT+TGG | + | chr1_3:46120934-46120953 | None:intergenic | 45.0% |
| GTTTCACCACCAGCTTCAAA+AGG | + | chr1_3:46121032-46121051 | None:intergenic | 45.0% | |
| AAACCAAACTAGGCCCTGTT+TGG | - | chr1_3:46121332-46121351 | Msa0120880:intron | 45.0% | |
| AATCCAAACAGGGCCTAGTT+TGG | + | chr1_3:46121338-46121357 | None:intergenic | 45.0% | |
| TTCCATAAGCTCTCCTTAGC+AGG | - | chr1_3:46121518-46121537 | Msa0120880:CDS | 45.0% | |
| TCCATAAGCTCTCCTTAGCA+GGG | - | chr1_3:46121519-46121538 | Msa0120880:CDS | 45.0% | |
| CACCCAAATAGGGCCTAATT+TGG | + | chr1_3:46122645-46122664 | None:intergenic | 45.0% | |
| AAGCACTTGTGACACTGCTT+GGG | + | chr1_3:46122825-46122844 | None:intergenic | 45.0% | |
| TAAGCACTTGTGACACTGCT+TGG | + | chr1_3:46122826-46122845 | None:intergenic | 45.0% | |
| TACCCGAAACTTGTGATGCT+AGG | - | chr1_3:46123229-46123248 | Msa0120880:intron | 45.0% | |
| AGGCCTAGCATCACAAGTTT+CGG | + | chr1_3:46123235-46123254 | None:intergenic | 45.0% | |
| CTCCCGAGAACAAGGTTATT+AGG | + | chr1_3:46123483-46123502 | None:intergenic | 45.0% | |
| CATACATTCTCCCGAGAACA+AGG | + | chr1_3:46123491-46123510 | None:intergenic | 45.0% | |
| !! | ACTTGATCTTTTTCGCGGAG+AGG | - | chr1_3:46123680-46123699 | Msa0120880:intron | 45.0% |
| ! | CACATTCTTTTGTTGGCAGC+TGG | - | chr1_3:46123729-46123748 | Msa0120880:intron | 45.0% |
| GGGCAGTACATACATATGCA+CGG | + | chr1_3:46123822-46123841 | None:intergenic | 45.0% | |
| AGTTGGTCCTTCCATGGATA+TGG | - | chr1_3:46123927-46123946 | Msa0120880:intron | 45.0% | |
| CCATGGATATGGTTATTCGC+CGG | - | chr1_3:46123938-46123957 | Msa0120880:intron | 45.0% | |
| TTTCATTAGGAGGACGATGC+CGG | + | chr1_3:46123960-46123979 | None:intergenic | 45.0% | |
| GTCAAAAAGGATCCCCTACA+AGG | - | chr1_3:46124129-46124148 | Msa0120880:intron | 45.0% | |
| GATCCCCTACAAGGAAAGAT+TGG | - | chr1_3:46124138-46124157 | Msa0120880:intron | 45.0% | |
| AAGCCAAGCAGCAGAAACAT+GGG | - | chr1_3:46124340-46124359 | Msa0120880:CDS | 45.0% | |
| GCATGCATCGAAAAAGCAGA+AGG | - | chr1_3:46124371-46124390 | Msa0120880:CDS | 45.0% | |
| ATTCTAGATTTCCCCCTTGC+AGG | - | chr1_3:46124523-46124542 | Msa0120880:intron | 45.0% | |
| TTCTAGATTTCCCCCTTGCA+GGG | - | chr1_3:46124524-46124543 | Msa0120880:intron | 45.0% | |
| AAAACTCATTCCCTGCAAGG+GGG | + | chr1_3:46124537-46124556 | None:intergenic | 45.0% | |
| CAAAACTCATTCCCTGCAAG+GGG | + | chr1_3:46124538-46124557 | None:intergenic | 45.0% | |
| CTTTGCTGCCATCTTCGCTA+TGG | - | chr1_3:46120656-46120675 | Msa0120880:three_prime_UTR | 50.0% | |
| ! | TCTGAAACTGTGCGGTGTGA+GGG | + | chr1_3:46120683-46120702 | None:intergenic | 50.0% |
| !! | TTCTGAAACTGTGCGGTGTG+AGG | + | chr1_3:46120684-46120703 | None:intergenic | 50.0% |
| !! | GGCGGTTCTGAATTCAGAGA+AGG | + | chr1_3:46120751-46120770 | None:intergenic | 50.0% |
| AGAACCGCCACAACCCATAA+GGG | - | chr1_3:46120762-46120781 | Msa0120880:three_prime_UTR | 50.0% | |
| ! | TTTGCCCTTATGGGTTGTGG+CGG | + | chr1_3:46120769-46120788 | None:intergenic | 50.0% |
| ! | GAGTTTGCCCTTATGGGTTG+TGG | + | chr1_3:46120772-46120791 | None:intergenic | 50.0% |
| ! | AGCTGGTGGTGAAACCTCTT+TGG | - | chr1_3:46121037-46121056 | Msa0120880:CDS | 50.0% |
| ACCCTGCTAAGGAGAGCTTA+TGG | + | chr1_3:46121523-46121542 | None:intergenic | 50.0% | |
| ACACTGCTTGGGAGAGCTTA+TGG | + | chr1_3:46122814-46122833 | None:intergenic | 50.0% | |
| GGCCTAGCATCACAAGTTTC+GGG | + | chr1_3:46123234-46123253 | None:intergenic | 50.0% | |
| TACATATGCACGGTCCACTC+CGG | + | chr1_3:46123812-46123831 | None:intergenic | 50.0% | |
| TACTGCCCTGTCTCCAACTA+AGG | - | chr1_3:46123834-46123853 | Msa0120880:intron | 50.0% | |
| TGGCACAGTTGTCCCAAGAA+TGG | - | chr1_3:46123894-46123913 | Msa0120880:intron | 50.0% | |
| ! | GGTAGAAGTTGGTCCTTCCA+TGG | - | chr1_3:46123921-46123940 | Msa0120880:intron | 50.0% |
| CCGGCGAATAACCATATCCA+TGG | + | chr1_3:46123941-46123960 | None:intergenic | 50.0% | |
| GTCCCTCTTACCTTCTGATC+TGG | + | chr1_3:46124177-46124196 | None:intergenic | 50.0% | |
| ! | GTTTCTGCTGCTTGGCTTCT+CGG | + | chr1_3:46124338-46124357 | None:intergenic | 50.0% |
| GAAGCCAAGCAGCAGAAACA+TGG | - | chr1_3:46124339-46124358 | Msa0120880:CDS | 50.0% | |
| ! | ACTCCCATGTTTCTGCTGCT+TGG | + | chr1_3:46124346-46124365 | None:intergenic | 50.0% |
| GACAGGCAGGGAAAGACAAT+AGG | + | chr1_3:46124432-46124451 | None:intergenic | 50.0% | |
| AGACGACCTTTATCCTCGAG+TGG | - | chr1_3:46124607-46124626 | Msa0120880:CDS | 50.0% | |
| CTGAAACTGTGCGGTGTGAG+GGG | + | chr1_3:46120682-46120701 | None:intergenic | 55.0% | |
| !! | GTGGCGGTTCTGAAACTGTG+CGG | + | chr1_3:46120691-46120710 | None:intergenic | 55.0% |
| CAGAACCGCCACAATCAAGG+TGG | - | chr1_3:46120699-46120718 | Msa0120880:three_prime_UTR | 55.0% | |
| TGTGTGCGCCACCTTGATTG+TGG | + | chr1_3:46120710-46120729 | None:intergenic | 55.0% | |
| CAGAACCGCCACAACCCATA+AGG | - | chr1_3:46120761-46120780 | Msa0120880:three_prime_UTR | 55.0% | |
| GAGGGCGAGTTTGCCCTTAT+GGG | + | chr1_3:46120778-46120797 | None:intergenic | 55.0% | |
| TGAGGGCGAGTTTGCCCTTA+TGG | + | chr1_3:46120779-46120798 | None:intergenic | 55.0% | |
| AAGCACTCGTCACCCTGCTA+AGG | + | chr1_3:46121534-46121553 | None:intergenic | 55.0% | |
| GCAGGGTGACGAGTGCTTAT+TGG | - | chr1_3:46121536-46121555 | Msa0120880:CDS | 55.0% | |
| GTGAGGGGCCATAGCGAAGA+TGG | + | chr1_3:46120667-46120686 | None:intergenic | 60.0% | |
| GTGCGCCACCTTGATTGTGG+CGG | + | chr1_3:46120707-46120726 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 46120635 | 46124766 | 46120635 | ID=Msa0120880;Name=Msa0120880 |
| chr1_3 | mRNA | 46120635 | 46124766 | 46120635 | ID=Msa0120880-mRNA-1;Parent=Msa0120880;Name=Msa0120880-mRNA-1;_AED=0.08;_eAED=0.08;_QI=40|1|1|1|1|1|6|359|341 |
| chr1_3 | exon | 46120635 | 46121116 | 46120635 | ID=Msa0120880-mRNA-1:exon:13894;Parent=Msa0120880-mRNA-1 |
| chr1_3 | exon | 46121216 | 46121281 | 46121216 | ID=Msa0120880-mRNA-1:exon:13893;Parent=Msa0120880-mRNA-1 |
| chr1_3 | exon | 46121372 | 46121614 | 46121372 | ID=Msa0120880-mRNA-1:exon:13892;Parent=Msa0120880-mRNA-1 |
| chr1_3 | exon | 46121700 | 46121945 | 46121700 | ID=Msa0120880-mRNA-1:exon:13891;Parent=Msa0120880-mRNA-1 |
| chr1_3 | exon | 46124304 | 46124507 | 46124304 | ID=Msa0120880-mRNA-1:exon:13890;Parent=Msa0120880-mRNA-1 |
| chr1_3 | exon | 46124583 | 46124766 | 46124583 | ID=Msa0120880-mRNA-1:exon:13889;Parent=Msa0120880-mRNA-1 |
| chr1_3 | five_prime_UTR | 46124727 | 46124766 | 46124727 | ID=Msa0120880-mRNA-1:five_prime_utr;Parent=Msa0120880-mRNA-1 |
| chr1_3 | CDS | 46124583 | 46124726 | 46124583 | ID=Msa0120880-mRNA-1:cds;Parent=Msa0120880-mRNA-1 |
| chr1_3 | CDS | 46124304 | 46124507 | 46124304 | ID=Msa0120880-mRNA-1:cds;Parent=Msa0120880-mRNA-1 |
| chr1_3 | CDS | 46121700 | 46121945 | 46121700 | ID=Msa0120880-mRNA-1:cds;Parent=Msa0120880-mRNA-1 |
| chr1_3 | CDS | 46121372 | 46121614 | 46121372 | ID=Msa0120880-mRNA-1:cds;Parent=Msa0120880-mRNA-1 |
| chr1_3 | CDS | 46121216 | 46121281 | 46121216 | ID=Msa0120880-mRNA-1:cds;Parent=Msa0120880-mRNA-1 |
| chr1_3 | CDS | 46120994 | 46121116 | 46120994 | ID=Msa0120880-mRNA-1:cds;Parent=Msa0120880-mRNA-1 |
| chr1_3 | three_prime_UTR | 46120635 | 46120993 | 46120635 | ID=Msa0120880-mRNA-1:three_prime_utr;Parent=Msa0120880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
