AlfalfaGEDB | Msa1105510

M. sativa cultivar zhongmu-4 / Msa1105510

KEGG: K02937
GO: GO:0000463 GO:0000470 GO:0002181 GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005840 GO:0006139 GO:0006364 GO:0006396 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015934 GO:0016070 GO:0016072 GO:0019538 GO:0022613 GO:0022625 GO:0022626 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034645 GO:0034660 GO:0042254 GO:0042273 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF08079.15

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1105510	XP_003622990.1	98.780	246	3	0	1	246	1	246	2.73e-178	499

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1105510	sp\|Q9SAI5\|RL71_ARATH	50.806	248	119	3	1	246	1	247	1.04e-76	235

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1105510	G7L2C7	98.780	246	3	0	1	246	1	246	1.30e-178	499

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0021220	Msa1105510	0.801543	8.567316e-49	-8.615850e-47
Msa0047160	Msa1105510	0.811076	8.390419e-51	-8.615850e-47
Msa0072420	Msa1105510	0.845910	3.023227e-59	-8.615850e-47
Msa0094470	Msa1105510	0.805186	1.507215e-49	-8.615850e-47
Msa0105370	Msa1105510	0.805102	1.569842e-49	-8.615850e-47
Msa0634890	Msa1105510	0.808010	3.821476e-50	-8.615850e-47
Msa0664560	Msa1105510	0.861947	7.169097e-64	-8.615850e-47
Msa0665100	Msa1105510	0.815558	8.691141e-52	-8.615850e-47
Msa0719610	Msa1105510	0.830158	3.437760e-55	-8.615850e-47
Msa0763330	Msa1105510	0.807638	4.583610e-50	-8.615850e-47
Msa0120880	Msa1105510	0.849972	2.293091e-60	-8.615850e-47
Msa0218720	Msa1105510	0.811697	6.148755e-51	-8.615850e-47
Msa0403500	Msa1105510	0.803799	2.933539e-49	-8.615850e-47
Msa0437020	Msa1105510	0.837461	5.128450e-57	-8.615850e-47
Msa0482130	Msa1105510	0.808268	3.366516e-50	-8.615850e-47
Msa0987370	Msa1105510	0.836016	1.197724e-56	-8.615850e-47
Msa1105460	Msa1105510	0.802763	4.808318e-49	-8.615850e-47
Msa1105510	Msa1123770	0.843849	1.088063e-58	-8.615850e-47
Msa1105510	Msa1126830	0.808597	2.864883e-50	-8.615850e-47
Msa1105510	Msa1148910	0.807199	5.681215e-50	-8.615850e-47
Msa1105510	Msa1165780	0.811715	6.094689e-51	-8.615850e-47
Msa1105510	Msa1169910	0.838422	2.903587e-57	-8.615850e-47
Msa1105510	Msa1209200	0.862666	4.312613e-64	-8.615850e-47
Msa1105510	Msa1209260	0.816261	6.056747e-52	-8.615850e-47
Msa1105510	Msa1265630	0.817317	3.510622e-52	-8.615850e-47
Msa1105510	Msa1277260	0.807729	4.384859e-50	-8.615850e-47
Msa1105510	Msa1298690	0.804902	1.728396e-49	-8.615850e-47
Msa1105510	Msa1300620	0.808424	3.118439e-50	-8.615850e-47
Msa1105510	Msa1302380	0.807032	6.162636e-50	-8.615850e-47
Msa1105510	Msa1315890	0.854599	1.105323e-61	-8.615850e-47
Msa1105510	Msa1329730	0.803827	2.894817e-49	-8.615850e-47
Msa1105510	Msa1332590	0.825565	4.372897e-54	-8.615850e-47
Msa1105510	Msa1351540	0.803863	2.846054e-49	-8.615850e-47
Msa1105510	Msa1385720	0.843703	1.190584e-58	-8.615850e-47
Msa1105510	Msa1419870	0.806886	6.615941e-50	-8.615850e-47
Msa1105510	Msa1434090	0.833993	3.874020e-56	-8.615850e-47
Msa0258390	Msa1105510	0.808966	2.388981e-50	-8.615850e-47
Msa0335730	Msa1105510	0.809249	2.077098e-50	-8.615850e-47
Msa0357900	Msa1105510	0.822173	2.728514e-53	-8.615850e-47
Msa0523430	Msa1105510	-0.801615	8.280829e-49	-8.615850e-47
Msa0581110	Msa1105510	0.808981	2.371253e-50	-8.615850e-47
Msa0581280	Msa1105510	0.866516	2.692586e-65	-8.615850e-47
Msa0588360	Msa1105510	0.802648	5.077444e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1105510	MtrunA17_Chr7g0237701	98.780	246	3	0	1	246	1	246	0.0	499
Msa1105510	MtrunA17_Chr4g0002321	47.234	235	123	1	13	246	9	243	9.34e-74	224
Msa1105510	MtrunA17_Chr1g0155331	46.383	235	125	1	13	246	10	244	5.39e-73	223
Msa1105510	MtrunA17_Chr2g0298841	45.344	247	131	2	1	246	1	244	9.54e-72	219
Msa1105510	MtrunA17_Chr3g0088731	83.784	74	11	1	1	74	1	73	3.49e-34	117
Msa1105510	MtrunA17_Chr1g0155311	56.667	60	26	0	177	236	3	62	7.36e-20	80.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1105510	AT1G80750.1	50.806	248	119	3	1	246	1	247	1.06e-77	235
Msa1105510	AT2G01250.1	48.101	237	118	2	13	246	8	242	1.39e-73	224
Msa1105510	AT2G44120.1	47.257	237	120	2	13	246	8	242	1.83e-73	224
Msa1105510	AT2G44120.2	47.257	237	120	2	13	246	13	247	1.88e-73	224
Msa1105510	AT3G13580.5	46.383	235	125	1	13	246	10	244	9.45e-73	222
Msa1105510	AT3G13580.4	46.383	235	125	1	13	246	10	244	9.45e-73	222
Msa1105510	AT3G13580.2	46.383	235	125	1	13	246	10	244	9.45e-73	222
Msa1105510	AT3G13580.3	46.383	235	125	1	13	246	10	244	9.45e-73	222
Msa1105510	AT3G13580.1	46.383	235	125	1	13	246	10	244	9.45e-73	222
Msa1105510	AT3G13580.7	46.383	235	125	1	13	246	10	244	9.45e-73	222
Msa1105510	AT3G13580.8	46.383	235	125	1	13	246	10	244	9.45e-73	222
Msa1105510	AT3G13580.6	46.383	235	125	1	13	246	10	244	9.45e-73	222
Msa1105510	AT3G13580.9	46.383	235	125	1	13	246	10	244	9.45e-73	222
Msa1105510	AT2G01250.2	43.605	172	92	2	13	181	8	177	1.17e-38	133

Find 77 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTAATATAATCACTGTTAA+TGG	0.176854	7_3:-44035975	Msa1105510:three_prime_UTR
CTTGTAAATCAGCTCCTTTA+TGG	0.209662	7_3:+44036392	None:intergenic
CTGTATACGAATGACTATTA+TGG	0.210395	7_3:+44037494	None:intergenic
CAAACTGAACAAGTGCTTTC+TGG	0.224300	7_3:+44037358	None:intergenic
TACAAGGATGGTGGAGATTC+AGG	0.234481	7_3:-44036068	Msa1105510:CDS
CAGAAAGCACTTGTTCAGTT+TGG	0.285410	7_3:-44037357	Msa1105510:CDS
TGGTAGAGTTAATACTTAAT+AGG	0.290322	7_3:+44038011	None:intergenic
CCCTTCGTTTCATTCTAATA+AGG	0.310268	7_3:+44037559	None:intergenic
AAGCCAGCAGAGGGATTAAA+AGG	0.319017	7_3:-44036104	Msa1105510:CDS
GGAATATAGTTGAGATCCTT+TGG	0.341915	7_3:+44037879	None:intergenic
AGAAAGCACTTGTTCAGTTT+GGG	0.358137	7_3:-44037356	Msa1105510:CDS
TTGTAGGAATTGGGAAAGTT+TGG	0.361702	7_3:-44036221	Msa1105510:intron
CTCTTCTTCAATATAACCTC+TGG	0.370051	7_3:+44037858	None:intergenic
TGCTGGCTTGTTCAGTTCAA+AGG	0.372394	7_3:+44036118	None:intergenic
CATAATAGTCATTCGTATAC+AGG	0.377208	7_3:-44037493	Msa1105510:CDS
TGTATACGAATGACTATTAT+GGG	0.402282	7_3:+44037495	None:intergenic
ACTATTATGGGCTTGTTGCT+TGG	0.413991	7_3:+44037507	None:intergenic
GACAATGAGAGGAAGGAGAA+AGG	0.422837	7_3:-44035824	Msa1105510:intron
TGCAAATCTTAAAACCATAA+AGG	0.425498	7_3:-44036406	Msa1105510:CDS
GTTCAAAGGGCCACATAAAT+CGG	0.432282	7_3:+44036132	None:intergenic
ACAATGAGAGGAAGGAGAAA+GGG	0.439757	7_3:-44035823	Msa1105510:intron
TATGTATTACCTGCTCAATA+AGG	0.444502	7_3:+44036319	None:intergenic
GCTGGCTTGTTCAGTTCAAA+GGG	0.448912	7_3:+44036119	None:intergenic
GTTGAACCATATGTCACCTA+TGG	0.470090	7_3:-44037266	Msa1105510:CDS
CAATGTTGGTCCACACTTCA+AGG	0.470139	7_3:-44036162	Msa1105510:CDS
GCTTACCCATAGGTGACATA+TGG	0.491527	7_3:+44037260	None:intergenic
ACGAAGGGTCAAGTGGAGAC+GGG	0.493528	7_3:-44037544	Msa1105510:CDS
TTGGCCATCACTCCATCAGT+TGG	0.498511	7_3:+44037299	None:intergenic
GTCTTTGTGAAGCCAACTGA+TGG	0.503340	7_3:-44037311	Msa1105510:CDS
AGCATGGGCCTTGAGTAAAA+AGG	0.505209	7_3:-44037823	Msa1105510:CDS
TAATCACTGTTAATGGTTTG+TGG	0.507204	7_3:-44035968	Msa1105510:three_prime_UTR
AGTCCTTGCTCTTCCTGAGC+TGG	0.512080	7_3:+44037778	None:intergenic
ACAAGGATGGTGGAGATTCA+GGG	0.513757	7_3:-44036067	Msa1105510:CDS
CAGAGGTTATATTGAAGAAG+AGG	0.519905	7_3:-44037857	Msa1105510:CDS
ACTTGAGAAGATGGCTGAAG+AGG	0.520776	7_3:-44037907	Msa1105510:exon
AGGAAGTTGTCCGATTTATG+TGG	0.520802	7_3:-44036142	Msa1105510:CDS
TGGTTTGTGGTGTCCTCACA+TGG	0.523920	7_3:-44035955	Msa1105510:three_prime_UTR
GAGAGGAAGGAGAAAGGGAT+TGG	0.527012	7_3:-44035818	Msa1105510:intron
TCAACAAAATGAATTGATGT+AGG	0.528075	7_3:-44036016	Msa1105510:exon
AAAGGAGCTGATTTACAAGA+AGG	0.528892	7_3:-44036388	Msa1105510:CDS
AACGAAGGGTCAAGTGGAGA+CGG	0.529927	7_3:-44037545	Msa1105510:CDS
CAGCTAAAAGCAATAAATGA+AGG	0.530960	7_3:+44035888	None:intergenic
AATCTCCACCATCCTTGTAT+CGG	0.534716	7_3:+44036072	None:intergenic
TGATGGAGTGATGGCCAAGC+TGG	0.538270	7_3:-44037294	Msa1105510:CDS
AGAGGAAACACAGTGAAGCA+TGG	0.551237	7_3:-44037839	Msa1105510:CDS
ATAAGGTTATTGTCTGTCAA+AGG	0.552916	7_3:+44036336	None:intergenic
CTTAGTTAGACTCAGACAGT+AGG	0.555194	7_3:+44037959	None:intergenic
AGACAATAACCTTATTGAGC+AGG	0.555591	7_3:-44036328	Msa1105510:intron
GCAGTGAAAACTTGAGAAGA+TGG	0.566242	7_3:-44037916	Msa1105510:exon
GAGGAAACACAGTGAAGCAT+GGG	0.567999	7_3:-44037838	Msa1105510:CDS
GTGCATCAAATTGACAATGT+TGG	0.571611	7_3:-44036176	Msa1105510:CDS
CGAAGGGTCAAGTGGAGACG+GGG	0.582255	7_3:-44037543	Msa1105510:CDS
GAACTGAACAAGCCAGCAGA+GGG	0.584219	7_3:-44036113	Msa1105510:CDS
TGGTTCAACTCTCGCCAGCT+TGG	0.586026	7_3:+44037280	None:intergenic
GGCTGAAGAGGAACAACCAA+AGG	0.590481	7_3:-44037895	Msa1105510:CDS
ATAATAGTCATTCGTATACA+GGG	0.594753	7_3:-44037492	Msa1105510:CDS
TTGAACCATATGTCACCTAT+GGG	0.596680	7_3:-44037265	Msa1105510:intron
ATAGCAACAAGAAAGTTACT+TGG	0.604719	7_3:+44037991	None:intergenic
GAATGAAACGAAGGGTCAAG+TGG	0.608473	7_3:-44037551	Msa1105510:CDS
AAGGAGCTGATTTACAAGAA+GGG	0.610645	7_3:-44036387	Msa1105510:CDS
TTCATTTCAGGACATAAACA+TGG	0.621482	7_3:+44035735	None:intergenic
CGGACAACTTCCTTGAAGTG+TGG	0.624573	7_3:+44036152	None:intergenic
TAAGAAAAGCTACCCTGTTG+CGG	0.624630	7_3:+44037721	None:intergenic
TTTCCAGCTCAGGAAGAGCA+AGG	0.627230	7_3:-44037781	Msa1105510:CDS
AAAAGGGAGCAACTACAGCA+TGG	0.628549	7_3:+44035770	None:intergenic
ACCTTATTAGAATGAAACGA+AGG	0.629621	7_3:-44037560	Msa1105510:CDS
CAAGGATGGTGGAGATTCAG+GGG	0.643297	7_3:-44036066	Msa1105510:CDS
TGAACTGAACAAGCCAGCAG+AGG	0.646369	7_3:-44036114	Msa1105510:CDS
CCTTATTAGAATGAAACGAA+GGG	0.647440	7_3:-44037559	Msa1105510:CDS
AAATCATCAAAATCCATGTG+AGG	0.647861	7_3:+44035942	None:intergenic
GAAGCCAACTGATGGAGTGA+TGG	0.656585	7_3:-44037303	Msa1105510:CDS
GGATCTCAACTATATTCCAG+AGG	0.692224	7_3:-44037874	Msa1105510:CDS
GCTCGTTGATGAGATCCTCA+CGG	0.699479	7_3:+44036042	None:intergenic
ATTATATTAATAGTATACTG+TGG	0.705629	7_3:+44035987	None:intergenic
GGAGACGGGGAGATAAATCG+AGG	0.706828	7_3:-44037530	Msa1105510:CDS
TGGAGATTCAGGGGACCGTG+AGG	0.708623	7_3:-44036057	Msa1105510:CDS
TAATAGTCATTCGTATACAG+GGG	0.708835	7_3:-44037491	Msa1105510:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATATAACAAAATAAAATGA+GGG	+	chr7_3:44036072-44036091	None:intergenic	10.0%
!!!	TTTTTGTTTTCTTTTTTATT+TGG	-	chr7_3:44037893-44037912	Msa1105510:CDS	10.0%
!!!	TTTTGTTTTCTTTTTTATTT+GGG	-	chr7_3:44037894-44037913	Msa1105510:CDS	10.0%
!!	AATATAACAAAATAAAATGA+GGG	+	chr7_3:44036072-44036091	None:intergenic	10.0%
!!!	TTTTTGTTTTCTTTTTTATT+TGG	-	chr7_3:44037893-44037912	Msa1105510:CDS	10.0%
!!!	TTTTGTTTTCTTTTTTATTT+GGG	-	chr7_3:44037894-44037913	Msa1105510:CDS	10.0%
!!	GAATATAACAAAATAAAATG+AGG	+	chr7_3:44036073-44036092	None:intergenic	15.0%
!!!	TATTTTGTTATATTCGATTT+AGG	-	chr7_3:44036078-44036097	Msa1105510:CDS	15.0%
!!	TTTATGTTATGATATGTAAT+TGG	-	chr7_3:44036573-44036592	Msa1105510:intron	15.0%
!!!	TTGAACTTTCATATATTTTT+AGG	-	chr7_3:44036609-44036628	Msa1105510:intron	15.0%
!!	AATTTATGAAGTTAACTTTA+TGG	+	chr7_3:44036941-44036960	None:intergenic	15.0%
!!!	TTTATGATGTTTTTTTGAAA+AGG	+	chr7_3:44036967-44036986	None:intergenic	15.0%
!!!	AAAACATCATAAATTGTTTT+TGG	-	chr7_3:44036974-44036993	Msa1105510:intron	15.0%
!!!	TACTATCTATAAATACTTTT+TGG	-	chr7_3:44037010-44037029	Msa1105510:intron	15.0%
!!!	TTTTTGGTTTATAATATTCA+CGG	-	chr7_3:44037026-44037045	Msa1105510:intron	15.0%
!!	ATTATATTAATAGTATACTG+TGG	+	chr7_3:44037774-44037793	None:intergenic	15.0%
!!	ATTAATATAATCACTGTTAA+TGG	-	chr7_3:44037783-44037802	Msa1105510:CDS	15.0%
!!	GAATATAACAAAATAAAATG+AGG	+	chr7_3:44036073-44036092	None:intergenic	15.0%
!!!	TATTTTGTTATATTCGATTT+AGG	-	chr7_3:44036078-44036097	Msa1105510:CDS	15.0%
!!	TTTATGTTATGATATGTAAT+TGG	-	chr7_3:44036573-44036592	Msa1105510:intron	15.0%
!!!	TTGAACTTTCATATATTTTT+AGG	-	chr7_3:44036609-44036628	Msa1105510:intron	15.0%
!!	AATTTATGAAGTTAACTTTA+TGG	+	chr7_3:44036941-44036960	None:intergenic	15.0%
!!!	TTTATGATGTTTTTTTGAAA+AGG	+	chr7_3:44036967-44036986	None:intergenic	15.0%
!!!	AAAACATCATAAATTGTTTT+TGG	-	chr7_3:44036974-44036993	Msa1105510:intron	15.0%
!!!	TACTATCTATAAATACTTTT+TGG	-	chr7_3:44037010-44037029	Msa1105510:intron	15.0%
!!!	TTTTTGGTTTATAATATTCA+CGG	-	chr7_3:44037026-44037045	Msa1105510:intron	15.0%
!!	ATTATATTAATAGTATACTG+TGG	+	chr7_3:44037774-44037793	None:intergenic	15.0%
!!	ATTAATATAATCACTGTTAA+TGG	-	chr7_3:44037783-44037802	Msa1105510:CDS	15.0%
!!	AAAATAAAATGAGGGATATA+AGG	+	chr7_3:44036064-44036083	None:intergenic	20.0%
!!!	ATATTTCTCTGTTTGTTTTT+AGG	-	chr7_3:44036355-44036374	Msa1105510:CDS	20.0%
!!!	AAACAGATTTTCACAAAATT+AGG	+	chr7_3:44037320-44037339	None:intergenic	20.0%
!!!	ATGGTTTTAGATATTGAAAA+GGG	+	chr7_3:44038007-44038026	None:intergenic	20.0%
!!	AAAATAAAATGAGGGATATA+AGG	+	chr7_3:44036064-44036083	None:intergenic	20.0%
!!!	ATATTTCTCTGTTTGTTTTT+AGG	-	chr7_3:44036355-44036374	Msa1105510:CDS	20.0%
!!!	AAACAGATTTTCACAAAATT+AGG	+	chr7_3:44037320-44037339	None:intergenic	20.0%
!!!	ATGGTTTTAGATATTGAAAA+GGG	+	chr7_3:44038007-44038026	None:intergenic	20.0%
!	TGGTAGAGTTAATACTTAAT+AGG	+	chr7_3:44035750-44035769	None:intergenic	25.0%
!	TATTCAAAAATGAAATCCTC+GGG	+	chr7_3:44036017-44036036	None:intergenic	25.0%
!	GTATTCAAAAATGAAATCCT+CGG	+	chr7_3:44036018-44036037	None:intergenic	25.0%
!	TGTATACGAATGACTATTAT+GGG	+	chr7_3:44036266-44036285	None:intergenic	25.0%
!	ATAATAGTCATTCGTATACA+GGG	-	chr7_3:44036266-44036285	Msa1105510:intron	25.0%
!	GACAAAAAAACAAAACATCA+AGG	+	chr7_3:44036311-44036330	None:intergenic	25.0%
!	TGTTATGATATGTAATTGGA+AGG	-	chr7_3:44036577-44036596	Msa1105510:intron	25.0%
!	GTTATGATATGTAATTGGAA+GGG	-	chr7_3:44036578-44036597	Msa1105510:intron	25.0%
!!!	GATTGACAAACACTATTTTT+AGG	-	chr7_3:44036790-44036809	Msa1105510:intron	25.0%
!	TATCAAAGATGTTTCTCTTA+TGG	-	chr7_3:44036842-44036861	Msa1105510:intron	25.0%
!	TTGGAGTAAATTTAGTTACA+GGG	+	chr7_3:44036870-44036889	None:intergenic	25.0%
!	ATTGGAGTAAATTTAGTTAC+AGG	+	chr7_3:44036871-44036890	None:intergenic	25.0%
!	TTATAATATTCACGGAAGAT+TGG	-	chr7_3:44037034-44037053	Msa1105510:intron	25.0%
!	TATAATATTCACGGAAGATT+GGG	-	chr7_3:44037035-44037054	Msa1105510:intron	25.0%
!!	AACCAGTTTTTCTAATAAAG+TGG	+	chr7_3:44037224-44037243	None:intergenic	25.0%
!	TGCAAATCTTAAAACCATAA+AGG	-	chr7_3:44037352-44037371	Msa1105510:CDS	25.0%
!	TCAACAAAATGAATTGATGT+AGG	-	chr7_3:44037742-44037761	Msa1105510:CDS	25.0%
!!!	TTTTATTTGGGTTAGTATGT+AGG	-	chr7_3:44037906-44037925	Msa1105510:exon	25.0%
!!!	TTTATTTGGGTTAGTATGTA+GGG	-	chr7_3:44037907-44037926	Msa1105510:exon	25.0%
!!!	CATGGTTTTAGATATTGAAA+AGG	+	chr7_3:44038008-44038027	None:intergenic	25.0%
!	TGGTAGAGTTAATACTTAAT+AGG	+	chr7_3:44035750-44035769	None:intergenic	25.0%
!	TATTCAAAAATGAAATCCTC+GGG	+	chr7_3:44036017-44036036	None:intergenic	25.0%
!	GTATTCAAAAATGAAATCCT+CGG	+	chr7_3:44036018-44036037	None:intergenic	25.0%
!	TGTATACGAATGACTATTAT+GGG	+	chr7_3:44036266-44036285	None:intergenic	25.0%
!	ATAATAGTCATTCGTATACA+GGG	-	chr7_3:44036266-44036285	Msa1105510:intron	25.0%
!	GACAAAAAAACAAAACATCA+AGG	+	chr7_3:44036311-44036330	None:intergenic	25.0%
!	TGTTATGATATGTAATTGGA+AGG	-	chr7_3:44036577-44036596	Msa1105510:intron	25.0%
!	GTTATGATATGTAATTGGAA+GGG	-	chr7_3:44036578-44036597	Msa1105510:intron	25.0%
!!!	GATTGACAAACACTATTTTT+AGG	-	chr7_3:44036790-44036809	Msa1105510:intron	25.0%
!	TATCAAAGATGTTTCTCTTA+TGG	-	chr7_3:44036842-44036861	Msa1105510:intron	25.0%
!	TTGGAGTAAATTTAGTTACA+GGG	+	chr7_3:44036870-44036889	None:intergenic	25.0%
!	ATTGGAGTAAATTTAGTTAC+AGG	+	chr7_3:44036871-44036890	None:intergenic	25.0%
!	TTATAATATTCACGGAAGAT+TGG	-	chr7_3:44037034-44037053	Msa1105510:intron	25.0%
!	TATAATATTCACGGAAGATT+GGG	-	chr7_3:44037035-44037054	Msa1105510:intron	25.0%
!!	AACCAGTTTTTCTAATAAAG+TGG	+	chr7_3:44037224-44037243	None:intergenic	25.0%
!	TGCAAATCTTAAAACCATAA+AGG	-	chr7_3:44037352-44037371	Msa1105510:CDS	25.0%
!	TCAACAAAATGAATTGATGT+AGG	-	chr7_3:44037742-44037761	Msa1105510:CDS	25.0%
!!!	TTTTATTTGGGTTAGTATGT+AGG	-	chr7_3:44037906-44037925	Msa1105510:exon	25.0%
!!!	TTTATTTGGGTTAGTATGTA+GGG	-	chr7_3:44037907-44037926	Msa1105510:exon	25.0%
!!!	CATGGTTTTAGATATTGAAA+AGG	+	chr7_3:44038008-44038027	None:intergenic	25.0%
	ATAGCAACAAGAAAGTTACT+TGG	+	chr7_3:44035770-44035789	None:intergenic	30.0%
	ACCTTATTAGAATGAAACGA+AGG	-	chr7_3:44036198-44036217	Msa1105510:CDS	30.0%
	CCTTATTAGAATGAAACGAA+GGG	-	chr7_3:44036199-44036218	Msa1105510:CDS	30.0%
	CTGTATACGAATGACTATTA+TGG	+	chr7_3:44036267-44036286	None:intergenic	30.0%
	CATAATAGTCATTCGTATAC+AGG	-	chr7_3:44036265-44036284	Msa1105510:intron	30.0%
	TAATAGTCATTCGTATACAG+GGG	-	chr7_3:44036267-44036286	Msa1105510:intron	30.0%
	ACACTATTTAGTACAGATAG+AGG	-	chr7_3:44036718-44036737	Msa1105510:intron	30.0%
	AAAATAGTGTTTGTCAATCG+AGG	+	chr7_3:44036789-44036808	None:intergenic	30.0%
	TGGAGTAAATTTAGTTACAG+GGG	+	chr7_3:44036869-44036888	None:intergenic	30.0%
	AAGTTTCAGTTCAAACTCTA+AGG	+	chr7_3:44036914-44036933	None:intergenic	30.0%
	CTCTACTATTAGTACACATA+AGG	+	chr7_3:44037133-44037152	None:intergenic	30.0%
	TATGTAAAGTAGTGCACATA+TGG	-	chr7_3:44037189-44037208	Msa1105510:intron	30.0%
	CACCACTTTATTAGAAAAAC+TGG	-	chr7_3:44037219-44037238	Msa1105510:intron	30.0%
	ATAAGGTTATTGTCTGTCAA+AGG	+	chr7_3:44037425-44037444	None:intergenic	30.0%
	TATGTATTACCTGCTCAATA+AGG	+	chr7_3:44037442-44037461	None:intergenic	30.0%
	ACAAAAACAATTCAGTGAGT+GGG	+	chr7_3:44037498-44037517	None:intergenic	30.0%
	TACAAAAACAATTCAGTGAG+TGG	+	chr7_3:44037499-44037518	None:intergenic	30.0%
	TAATCACTGTTAATGGTTTG+TGG	-	chr7_3:44037790-44037809	Msa1105510:CDS	30.0%
	AAATCATCAAAATCCATGTG+AGG	+	chr7_3:44037819-44037838	None:intergenic	30.0%
	CAGCTAAAAGCAATAAATGA+AGG	+	chr7_3:44037873-44037892	None:intergenic	30.0%
!!	TTATTTGGGTTAGTATGTAG+GGG	-	chr7_3:44037908-44037927	Msa1105510:exon	30.0%
	ATAGCAACAAGAAAGTTACT+TGG	+	chr7_3:44035770-44035789	None:intergenic	30.0%
	ACCTTATTAGAATGAAACGA+AGG	-	chr7_3:44036198-44036217	Msa1105510:CDS	30.0%
	CCTTATTAGAATGAAACGAA+GGG	-	chr7_3:44036199-44036218	Msa1105510:CDS	30.0%
	CTGTATACGAATGACTATTA+TGG	+	chr7_3:44036267-44036286	None:intergenic	30.0%
	CATAATAGTCATTCGTATAC+AGG	-	chr7_3:44036265-44036284	Msa1105510:intron	30.0%
	TAATAGTCATTCGTATACAG+GGG	-	chr7_3:44036267-44036286	Msa1105510:intron	30.0%
	ACACTATTTAGTACAGATAG+AGG	-	chr7_3:44036718-44036737	Msa1105510:intron	30.0%
	AAAATAGTGTTTGTCAATCG+AGG	+	chr7_3:44036789-44036808	None:intergenic	30.0%
	TGGAGTAAATTTAGTTACAG+GGG	+	chr7_3:44036869-44036888	None:intergenic	30.0%
	AAGTTTCAGTTCAAACTCTA+AGG	+	chr7_3:44036914-44036933	None:intergenic	30.0%
	CTCTACTATTAGTACACATA+AGG	+	chr7_3:44037133-44037152	None:intergenic	30.0%
	TATGTAAAGTAGTGCACATA+TGG	-	chr7_3:44037189-44037208	Msa1105510:intron	30.0%
	CACCACTTTATTAGAAAAAC+TGG	-	chr7_3:44037219-44037238	Msa1105510:intron	30.0%
	ATAAGGTTATTGTCTGTCAA+AGG	+	chr7_3:44037425-44037444	None:intergenic	30.0%
	TATGTATTACCTGCTCAATA+AGG	+	chr7_3:44037442-44037461	None:intergenic	30.0%
	ACAAAAACAATTCAGTGAGT+GGG	+	chr7_3:44037498-44037517	None:intergenic	30.0%
	TACAAAAACAATTCAGTGAG+TGG	+	chr7_3:44037499-44037518	None:intergenic	30.0%
	TAATCACTGTTAATGGTTTG+TGG	-	chr7_3:44037790-44037809	Msa1105510:CDS	30.0%
	AAATCATCAAAATCCATGTG+AGG	+	chr7_3:44037819-44037838	None:intergenic	30.0%
	CAGCTAAAAGCAATAAATGA+AGG	+	chr7_3:44037873-44037892	None:intergenic	30.0%
!!	TTATTTGGGTTAGTATGTAG+GGG	-	chr7_3:44037908-44037927	Msa1105510:exon	30.0%
	GGAATATAGTTGAGATCCTT+TGG	+	chr7_3:44035882-44035901	None:intergenic	35.0%
	CTCTTCTTCAATATAACCTC+TGG	+	chr7_3:44035903-44035922	None:intergenic	35.0%
	CAGAGGTTATATTGAAGAAG+AGG	-	chr7_3:44035901-44035920	Msa1105510:three_prime_UTR	35.0%
!!!	TGAGCTGGAAACTTTTTTTC+TGG	+	chr7_3:44035968-44035987	None:intergenic	35.0%
	AGAAAAAAAGTTTCCAGCTC+AGG	-	chr7_3:44035967-44035986	Msa1105510:three_prime_UTR	35.0%
!!	TCATTTTTGAATACCGCAAC+AGG	-	chr7_3:44036024-44036043	Msa1105510:CDS	35.0%
!	CATTTTTGAATACCGCAACA+GGG	-	chr7_3:44036025-44036044	Msa1105510:CDS	35.0%
	ATGACTTCTATCACTTGTGT+AGG	-	chr7_3:44036169-44036188	Msa1105510:CDS	35.0%
	CCCTTCGTTTCATTCTAATA+AGG	+	chr7_3:44036202-44036221	None:intergenic	35.0%
!!	AGAAAGCACTTGTTCAGTTT+GGG	-	chr7_3:44036402-44036421	Msa1105510:CDS	35.0%
	TTGAACCATATGTCACCTAT+GGG	-	chr7_3:44036493-44036512	Msa1105510:intron	35.0%
!	TCAGTTCAAACTCTAAGGAT+AGG	+	chr7_3:44036909-44036928	None:intergenic	35.0%
	TTGGGTTATTTGGAGATCAA+AGG	-	chr7_3:44037053-44037072	Msa1105510:intron	35.0%
	ATCCTCAGCAAACTGAAATT+TGG	+	chr7_3:44037293-44037312	None:intergenic	35.0%
	CTTGTAAATCAGCTCCTTTA+TGG	+	chr7_3:44037369-44037388	None:intergenic	35.0%
!	AAAGGAGCTGATTTACAAGA+AGG	-	chr7_3:44037370-44037389	Msa1105510:CDS	35.0%
!	AAGGAGCTGATTTACAAGAA+GGG	-	chr7_3:44037371-44037390	Msa1105510:CDS	35.0%
	AGACAATAACCTTATTGAGC+AGG	-	chr7_3:44037430-44037449	Msa1105510:intron	35.0%
	TTGAGCAGGTAATACATACA+CGG	-	chr7_3:44037444-44037463	Msa1105510:intron	35.0%
	CAAAGGAAAACTAGGAATCT+AGG	+	chr7_3:44037474-44037493	None:intergenic	35.0%
	AATTCCTACAAGGCAAAAAG+TGG	+	chr7_3:44037528-44037547	None:intergenic	35.0%
!	ACTTTTTGCCTTGTAGGAAT+TGG	-	chr7_3:44037527-44037546	Msa1105510:CDS	35.0%
!	CTTTTTGCCTTGTAGGAATT+GGG	-	chr7_3:44037528-44037547	Msa1105510:CDS	35.0%
	AAACTTTCCCAATTCCTACA+AGG	+	chr7_3:44037538-44037557	None:intergenic	35.0%
	TTGTAGGAATTGGGAAAGTT+TGG	-	chr7_3:44037537-44037556	Msa1105510:CDS	35.0%
	GTGCATCAAATTGACAATGT+TGG	-	chr7_3:44037582-44037601	Msa1105510:intron	35.0%
	AGGATTGAAAAACCGATACA+AGG	-	chr7_3:44037674-44037693	Msa1105510:intron	35.0%
	TTGAAAAACCGATACAAGGA+TGG	-	chr7_3:44037678-44037697	Msa1105510:intron	35.0%
!!	TATTTGGGTTAGTATGTAGG+GGG	-	chr7_3:44037909-44037928	Msa1105510:exon	35.0%
	AACCATGTTTATGTCCTGAA+AGG	-	chr7_3:44038021-44038040	Msa1105510:five_prime_UTR	35.0%
	GGAATATAGTTGAGATCCTT+TGG	+	chr7_3:44035882-44035901	None:intergenic	35.0%
	CTCTTCTTCAATATAACCTC+TGG	+	chr7_3:44035903-44035922	None:intergenic	35.0%
	CAGAGGTTATATTGAAGAAG+AGG	-	chr7_3:44035901-44035920	Msa1105510:three_prime_UTR	35.0%
!!!	TGAGCTGGAAACTTTTTTTC+TGG	+	chr7_3:44035968-44035987	None:intergenic	35.0%
	AGAAAAAAAGTTTCCAGCTC+AGG	-	chr7_3:44035967-44035986	Msa1105510:three_prime_UTR	35.0%
!!	TCATTTTTGAATACCGCAAC+AGG	-	chr7_3:44036024-44036043	Msa1105510:CDS	35.0%
!	CATTTTTGAATACCGCAACA+GGG	-	chr7_3:44036025-44036044	Msa1105510:CDS	35.0%
	ATGACTTCTATCACTTGTGT+AGG	-	chr7_3:44036169-44036188	Msa1105510:CDS	35.0%
	CCCTTCGTTTCATTCTAATA+AGG	+	chr7_3:44036202-44036221	None:intergenic	35.0%
!!	AGAAAGCACTTGTTCAGTTT+GGG	-	chr7_3:44036402-44036421	Msa1105510:CDS	35.0%
	TTGAACCATATGTCACCTAT+GGG	-	chr7_3:44036493-44036512	Msa1105510:intron	35.0%
!	TCAGTTCAAACTCTAAGGAT+AGG	+	chr7_3:44036909-44036928	None:intergenic	35.0%
	TTGGGTTATTTGGAGATCAA+AGG	-	chr7_3:44037053-44037072	Msa1105510:intron	35.0%
	ATCCTCAGCAAACTGAAATT+TGG	+	chr7_3:44037293-44037312	None:intergenic	35.0%
	CTTGTAAATCAGCTCCTTTA+TGG	+	chr7_3:44037369-44037388	None:intergenic	35.0%
!	AAAGGAGCTGATTTACAAGA+AGG	-	chr7_3:44037370-44037389	Msa1105510:CDS	35.0%
!	AAGGAGCTGATTTACAAGAA+GGG	-	chr7_3:44037371-44037390	Msa1105510:CDS	35.0%
	AGACAATAACCTTATTGAGC+AGG	-	chr7_3:44037430-44037449	Msa1105510:intron	35.0%
	TTGAGCAGGTAATACATACA+CGG	-	chr7_3:44037444-44037463	Msa1105510:intron	35.0%
	CAAAGGAAAACTAGGAATCT+AGG	+	chr7_3:44037474-44037493	None:intergenic	35.0%
	AATTCCTACAAGGCAAAAAG+TGG	+	chr7_3:44037528-44037547	None:intergenic	35.0%
!	ACTTTTTGCCTTGTAGGAAT+TGG	-	chr7_3:44037527-44037546	Msa1105510:CDS	35.0%
!	CTTTTTGCCTTGTAGGAATT+GGG	-	chr7_3:44037528-44037547	Msa1105510:CDS	35.0%
	AAACTTTCCCAATTCCTACA+AGG	+	chr7_3:44037538-44037557	None:intergenic	35.0%
	TTGTAGGAATTGGGAAAGTT+TGG	-	chr7_3:44037537-44037556	Msa1105510:CDS	35.0%
	GTGCATCAAATTGACAATGT+TGG	-	chr7_3:44037582-44037601	Msa1105510:intron	35.0%
	AGGATTGAAAAACCGATACA+AGG	-	chr7_3:44037674-44037693	Msa1105510:intron	35.0%
	TTGAAAAACCGATACAAGGA+TGG	-	chr7_3:44037678-44037697	Msa1105510:intron	35.0%
!!	TATTTGGGTTAGTATGTAGG+GGG	-	chr7_3:44037909-44037928	Msa1105510:exon	35.0%
	CTTAGTTAGACTCAGACAGT+AGG	+	chr7_3:44035802-44035821	None:intergenic	40.0%
	GCAGTGAAAACTTGAGAAGA+TGG	-	chr7_3:44035842-44035861	Msa1105510:intron	40.0%
	GGATCTCAACTATATTCCAG+AGG	-	chr7_3:44035884-44035903	Msa1105510:three_prime_UTR	40.0%
	TAAGAAAAGCTACCCTGTTG+CGG	+	chr7_3:44036040-44036059	None:intergenic	40.0%
!!	ACTATTATGGGCTTGTTGCT+TGG	+	chr7_3:44036254-44036273	None:intergenic	40.0%
	CAAACTGAACAAGTGCTTTC+TGG	+	chr7_3:44036403-44036422	None:intergenic	40.0%
!!	CAGAAAGCACTTGTTCAGTT+TGG	-	chr7_3:44036401-44036420	Msa1105510:CDS	40.0%
	GTTGAACCATATGTCACCTA+TGG	-	chr7_3:44036492-44036511	Msa1105510:intron	40.0%
	TCAATCAATCGCTTACCCAT+AGG	+	chr7_3:44036511-44036530	None:intergenic	40.0%
	ACTATTGTGCTATAGCGTAG+AGG	-	chr7_3:44036665-44036684	Msa1105510:intron	40.0%
!	TCAAACTCTAAGGATAGGAG+AGG	+	chr7_3:44036904-44036923	None:intergenic	40.0%
	TCACGGAAGATTGGGTTATT+TGG	-	chr7_3:44037043-44037062	Msa1105510:intron	40.0%
	CAGATGCTTGCAACTATGTT+AGG	-	chr7_3:44037091-44037110	Msa1105510:intron	40.0%
	GCTTGCAACTATGTTAGGAA+AGG	-	chr7_3:44037096-44037115	Msa1105510:intron	40.0%
	CACAGGAAAGTAAAGATGCA+AGG	+	chr7_3:44037256-44037275	None:intergenic	40.0%
	TGGCGATAATGCATATACAC+AGG	+	chr7_3:44037273-44037292	None:intergenic	40.0%
!!!	TGTTCCACTTTTTGCCTTGT+AGG	-	chr7_3:44037521-44037540	Msa1105510:CDS	40.0%
	AGGAAGTTGTCCGATTTATG+TGG	-	chr7_3:44037616-44037635	Msa1105510:intron	40.0%
	GTTCAAAGGGCCACATAAAT+CGG	+	chr7_3:44037629-44037648	None:intergenic	40.0%
!	AATCCTTTTAATCCCTCTGC+TGG	+	chr7_3:44037660-44037679	None:intergenic	40.0%
	AAAAACCGATACAAGGATGG+TGG	-	chr7_3:44037681-44037700	Msa1105510:intron	40.0%
	AATCTCCACCATCCTTGTAT+CGG	+	chr7_3:44037689-44037708	None:intergenic	40.0%
	ACAATGAGAGGAAGGAGAAA+GGG	-	chr7_3:44037935-44037954	Msa1105510:five_prime_UTR	40.0%
	CTTAGTTAGACTCAGACAGT+AGG	+	chr7_3:44035802-44035821	None:intergenic	40.0%
	GCAGTGAAAACTTGAGAAGA+TGG	-	chr7_3:44035842-44035861	Msa1105510:intron	40.0%
	GGATCTCAACTATATTCCAG+AGG	-	chr7_3:44035884-44035903	Msa1105510:three_prime_UTR	40.0%
	TAAGAAAAGCTACCCTGTTG+CGG	+	chr7_3:44036040-44036059	None:intergenic	40.0%
!!	ACTATTATGGGCTTGTTGCT+TGG	+	chr7_3:44036254-44036273	None:intergenic	40.0%
	CAAACTGAACAAGTGCTTTC+TGG	+	chr7_3:44036403-44036422	None:intergenic	40.0%
!!	CAGAAAGCACTTGTTCAGTT+TGG	-	chr7_3:44036401-44036420	Msa1105510:CDS	40.0%
	GTTGAACCATATGTCACCTA+TGG	-	chr7_3:44036492-44036511	Msa1105510:intron	40.0%
	TCAATCAATCGCTTACCCAT+AGG	+	chr7_3:44036511-44036530	None:intergenic	40.0%
	ACTATTGTGCTATAGCGTAG+AGG	-	chr7_3:44036665-44036684	Msa1105510:intron	40.0%
!	TCAAACTCTAAGGATAGGAG+AGG	+	chr7_3:44036904-44036923	None:intergenic	40.0%
	TCACGGAAGATTGGGTTATT+TGG	-	chr7_3:44037043-44037062	Msa1105510:intron	40.0%
	CAGATGCTTGCAACTATGTT+AGG	-	chr7_3:44037091-44037110	Msa1105510:intron	40.0%
	GCTTGCAACTATGTTAGGAA+AGG	-	chr7_3:44037096-44037115	Msa1105510:intron	40.0%
	CACAGGAAAGTAAAGATGCA+AGG	+	chr7_3:44037256-44037275	None:intergenic	40.0%
	TGGCGATAATGCATATACAC+AGG	+	chr7_3:44037273-44037292	None:intergenic	40.0%
!!!	TGTTCCACTTTTTGCCTTGT+AGG	-	chr7_3:44037521-44037540	Msa1105510:CDS	40.0%
	AGGAAGTTGTCCGATTTATG+TGG	-	chr7_3:44037616-44037635	Msa1105510:intron	40.0%
	GTTCAAAGGGCCACATAAAT+CGG	+	chr7_3:44037629-44037648	None:intergenic	40.0%
!	AATCCTTTTAATCCCTCTGC+TGG	+	chr7_3:44037660-44037679	None:intergenic	40.0%
	AAAAACCGATACAAGGATGG+TGG	-	chr7_3:44037681-44037700	Msa1105510:intron	40.0%
	AATCTCCACCATCCTTGTAT+CGG	+	chr7_3:44037689-44037708	None:intergenic	40.0%
	ACAATGAGAGGAAGGAGAAA+GGG	-	chr7_3:44037935-44037954	Msa1105510:five_prime_UTR	40.0%
	ACTTGAGAAGATGGCTGAAG+AGG	-	chr7_3:44035851-44035870	Msa1105510:intron	45.0%
	AGAGGAAACACAGTGAAGCA+TGG	-	chr7_3:44035919-44035938	Msa1105510:three_prime_UTR	45.0%
	GAGGAAACACAGTGAAGCAT+GGG	-	chr7_3:44035920-44035939	Msa1105510:three_prime_UTR	45.0%
	AGCATGGGCCTTGAGTAAAA+AGG	-	chr7_3:44035935-44035954	Msa1105510:three_prime_UTR	45.0%
!	GAGTTGCGCCTTTTTACTCA+AGG	+	chr7_3:44035946-44035965	None:intergenic	45.0%
	GGACTTCATAAAAAAGCCCG+AGG	-	chr7_3:44035998-44036017	Msa1105510:three_prime_UTR	45.0%
	GAATGAAACGAAGGGTCAAG+TGG	-	chr7_3:44036207-44036226	Msa1105510:CDS	45.0%
	GTCTTTGTGAAGCCAACTGA+TGG	-	chr7_3:44036447-44036466	Msa1105510:intron	45.0%
	GCTTACCCATAGGTGACATA+TGG	+	chr7_3:44036501-44036520	None:intergenic	45.0%
!!	ATAGAGGCACTATAGCCATG+TGG	-	chr7_3:44036734-44036753	Msa1105510:intron	45.0%
!!	TAGAGGCACTATAGCCATGT+GGG	-	chr7_3:44036735-44036754	Msa1105510:intron	45.0%
	TTCAAATTCCGCTACCCACA+TGG	+	chr7_3:44036752-44036771	None:intergenic	45.0%
	GCATCATGTGTGACATGCAT+AGG	+	chr7_3:44037160-44037179	None:intergenic	45.0%
!!	CGCCAAATTTCAGTTTGCTG+AGG	-	chr7_3:44037288-44037307	Msa1105510:CDS	45.0%
	GAGTGGGTCAAAGGAAAACT+AGG	+	chr7_3:44037482-44037501	None:intergenic	45.0%
	CAATTCAGTGAGTGGGTCAA+AGG	+	chr7_3:44037491-44037510	None:intergenic	45.0%
	CAATGTTGGTCCACACTTCA+AGG	-	chr7_3:44037596-44037615	Msa1105510:intron	45.0%
!!	GCTGGCTTGTTCAGTTCAAA+GGG	+	chr7_3:44037642-44037661	None:intergenic	45.0%
!!	TGCTGGCTTGTTCAGTTCAA+AGG	+	chr7_3:44037643-44037662	None:intergenic	45.0%
	AAGCCAGCAGAGGGATTAAA+AGG	-	chr7_3:44037654-44037673	Msa1105510:intron	45.0%
!!	TACAAGGATGGTGGAGATTC+AGG	-	chr7_3:44037690-44037709	Msa1105510:intron	45.0%
!!	ACAAGGATGGTGGAGATTCA+GGG	-	chr7_3:44037691-44037710	Msa1105510:intron	45.0%
	GACAATGAGAGGAAGGAGAA+AGG	-	chr7_3:44037934-44037953	Msa1105510:five_prime_UTR	45.0%
	AAAAGGGAGCAACTACAGCA+TGG	+	chr7_3:44037991-44038010	None:intergenic	45.0%
	ACTTGAGAAGATGGCTGAAG+AGG	-	chr7_3:44035851-44035870	Msa1105510:intron	45.0%
	AGAGGAAACACAGTGAAGCA+TGG	-	chr7_3:44035919-44035938	Msa1105510:three_prime_UTR	45.0%
	GAGGAAACACAGTGAAGCAT+GGG	-	chr7_3:44035920-44035939	Msa1105510:three_prime_UTR	45.0%
	AGCATGGGCCTTGAGTAAAA+AGG	-	chr7_3:44035935-44035954	Msa1105510:three_prime_UTR	45.0%
!	GAGTTGCGCCTTTTTACTCA+AGG	+	chr7_3:44035946-44035965	None:intergenic	45.0%
	GGACTTCATAAAAAAGCCCG+AGG	-	chr7_3:44035998-44036017	Msa1105510:three_prime_UTR	45.0%
	GAATGAAACGAAGGGTCAAG+TGG	-	chr7_3:44036207-44036226	Msa1105510:CDS	45.0%
	GTCTTTGTGAAGCCAACTGA+TGG	-	chr7_3:44036447-44036466	Msa1105510:intron	45.0%
	GCTTACCCATAGGTGACATA+TGG	+	chr7_3:44036501-44036520	None:intergenic	45.0%
!!	ATAGAGGCACTATAGCCATG+TGG	-	chr7_3:44036734-44036753	Msa1105510:intron	45.0%
!!	TAGAGGCACTATAGCCATGT+GGG	-	chr7_3:44036735-44036754	Msa1105510:intron	45.0%
	TTCAAATTCCGCTACCCACA+TGG	+	chr7_3:44036752-44036771	None:intergenic	45.0%
	GCATCATGTGTGACATGCAT+AGG	+	chr7_3:44037160-44037179	None:intergenic	45.0%
!!	CGCCAAATTTCAGTTTGCTG+AGG	-	chr7_3:44037288-44037307	Msa1105510:CDS	45.0%
	GAGTGGGTCAAAGGAAAACT+AGG	+	chr7_3:44037482-44037501	None:intergenic	45.0%
	CAATTCAGTGAGTGGGTCAA+AGG	+	chr7_3:44037491-44037510	None:intergenic	45.0%
	CAATGTTGGTCCACACTTCA+AGG	-	chr7_3:44037596-44037615	Msa1105510:intron	45.0%
!!	GCTGGCTTGTTCAGTTCAAA+GGG	+	chr7_3:44037642-44037661	None:intergenic	45.0%
!!	TGCTGGCTTGTTCAGTTCAA+AGG	+	chr7_3:44037643-44037662	None:intergenic	45.0%
	AAGCCAGCAGAGGGATTAAA+AGG	-	chr7_3:44037654-44037673	Msa1105510:intron	45.0%
!!	TACAAGGATGGTGGAGATTC+AGG	-	chr7_3:44037690-44037709	Msa1105510:intron	45.0%
!!	ACAAGGATGGTGGAGATTCA+GGG	-	chr7_3:44037691-44037710	Msa1105510:intron	45.0%
	GACAATGAGAGGAAGGAGAA+AGG	-	chr7_3:44037934-44037953	Msa1105510:five_prime_UTR	45.0%
	AAAAGGGAGCAACTACAGCA+TGG	+	chr7_3:44037991-44038010	None:intergenic	45.0%
	GGCTGAAGAGGAACAACCAA+AGG	-	chr7_3:44035863-44035882	Msa1105510:three_prime_UTR	50.0%
	TTTCCAGCTCAGGAAGAGCA+AGG	-	chr7_3:44035977-44035996	Msa1105510:three_prime_UTR	50.0%
	AACGAAGGGTCAAGTGGAGA+CGG	-	chr7_3:44036213-44036232	Msa1105510:CDS	50.0%
	GAAGCCAACTGATGGAGTGA+TGG	-	chr7_3:44036455-44036474	Msa1105510:intron	50.0%
	TTGGCCATCACTCCATCAGT+TGG	+	chr7_3:44036462-44036481	None:intergenic	50.0%
	CACTATAGCCATGTGGGTAG+CGG	-	chr7_3:44036741-44036760	Msa1105510:intron	50.0%
	AGGAGAGGCAGCTATGCTAT+TGG	+	chr7_3:44036889-44036908	None:intergenic	50.0%
	CGGACAACTTCCTTGAAGTG+TGG	+	chr7_3:44037609-44037628	None:intergenic	50.0%
	TGAACTGAACAAGCCAGCAG+AGG	-	chr7_3:44037644-44037663	Msa1105510:intron	50.0%
	GAACTGAACAAGCCAGCAGA+GGG	-	chr7_3:44037645-44037664	Msa1105510:intron	50.0%
!!	CAAGGATGGTGGAGATTCAG+GGG	-	chr7_3:44037692-44037711	Msa1105510:intron	50.0%
!	GCTCGTTGATGAGATCCTCA+CGG	+	chr7_3:44037719-44037738	None:intergenic	50.0%
!	TGGTTTGTGGTGTCCTCACA+TGG	-	chr7_3:44037803-44037822	Msa1105510:CDS	50.0%
	TGTAGGGGGTTGACAATGAG+AGG	-	chr7_3:44037923-44037942	Msa1105510:five_prime_UTR	50.0%
	GAGAGGAAGGAGAAAGGGAT+TGG	-	chr7_3:44037940-44037959	Msa1105510:five_prime_UTR	50.0%
	GGCTGAAGAGGAACAACCAA+AGG	-	chr7_3:44035863-44035882	Msa1105510:three_prime_UTR	50.0%
	TTTCCAGCTCAGGAAGAGCA+AGG	-	chr7_3:44035977-44035996	Msa1105510:three_prime_UTR	50.0%
	AACGAAGGGTCAAGTGGAGA+CGG	-	chr7_3:44036213-44036232	Msa1105510:CDS	50.0%
	GAAGCCAACTGATGGAGTGA+TGG	-	chr7_3:44036455-44036474	Msa1105510:intron	50.0%
	TTGGCCATCACTCCATCAGT+TGG	+	chr7_3:44036462-44036481	None:intergenic	50.0%
	CACTATAGCCATGTGGGTAG+CGG	-	chr7_3:44036741-44036760	Msa1105510:intron	50.0%
	AGGAGAGGCAGCTATGCTAT+TGG	+	chr7_3:44036889-44036908	None:intergenic	50.0%
	CGGACAACTTCCTTGAAGTG+TGG	+	chr7_3:44037609-44037628	None:intergenic	50.0%
	TGAACTGAACAAGCCAGCAG+AGG	-	chr7_3:44037644-44037663	Msa1105510:intron	50.0%
	GAACTGAACAAGCCAGCAGA+GGG	-	chr7_3:44037645-44037664	Msa1105510:intron	50.0%
!!	CAAGGATGGTGGAGATTCAG+GGG	-	chr7_3:44037692-44037711	Msa1105510:intron	50.0%
!	GCTCGTTGATGAGATCCTCA+CGG	+	chr7_3:44037719-44037738	None:intergenic	50.0%
!	TGGTTTGTGGTGTCCTCACA+TGG	-	chr7_3:44037803-44037822	Msa1105510:CDS	50.0%
	TGTAGGGGGTTGACAATGAG+AGG	-	chr7_3:44037923-44037942	Msa1105510:five_prime_UTR	50.0%
	GAGAGGAAGGAGAAAGGGAT+TGG	-	chr7_3:44037940-44037959	Msa1105510:five_prime_UTR	50.0%
	AGTCCTTGCTCTTCCTGAGC+TGG	+	chr7_3:44035983-44036002	None:intergenic	55.0%
	ACGAAGGGTCAAGTGGAGAC+GGG	-	chr7_3:44036214-44036233	Msa1105510:CDS	55.0%
	GGAGACGGGGAGATAAATCG+AGG	-	chr7_3:44036228-44036247	Msa1105510:intron	55.0%
	TGATGGAGTGATGGCCAAGC+TGG	-	chr7_3:44036464-44036483	Msa1105510:intron	55.0%
	TGGTTCAACTCTCGCCAGCT+TGG	+	chr7_3:44036481-44036500	None:intergenic	55.0%
	GGGGGTTGACAATGAGAGGA+AGG	-	chr7_3:44037927-44037946	Msa1105510:five_prime_UTR	55.0%
	AGTCCTTGCTCTTCCTGAGC+TGG	+	chr7_3:44035983-44036002	None:intergenic	55.0%
	ACGAAGGGTCAAGTGGAGAC+GGG	-	chr7_3:44036214-44036233	Msa1105510:CDS	55.0%
	GGAGACGGGGAGATAAATCG+AGG	-	chr7_3:44036228-44036247	Msa1105510:intron	55.0%
	TGATGGAGTGATGGCCAAGC+TGG	-	chr7_3:44036464-44036483	Msa1105510:intron	55.0%
	TGGTTCAACTCTCGCCAGCT+TGG	+	chr7_3:44036481-44036500	None:intergenic	55.0%
	GGGGGTTGACAATGAGAGGA+AGG	-	chr7_3:44037927-44037946	Msa1105510:five_prime_UTR	55.0%
	CGAAGGGTCAAGTGGAGACG+GGG	-	chr7_3:44036215-44036234	Msa1105510:CDS	60.0%
	TGGAGATTCAGGGGACCGTG+AGG	-	chr7_3:44037701-44037720	Msa1105510:intron	60.0%
	CGAAGGGTCAAGTGGAGACG+GGG	-	chr7_3:44036215-44036234	Msa1105510:CDS	60.0%
	TGGAGATTCAGGGGACCGTG+AGG	-	chr7_3:44037701-44037720	Msa1105510:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_3	gene	44035739	44038041	44035739	ID=Msa1105510;Name=Msa1105510
chr7_3	mRNA	44035739	44038041	44035739	ID=Msa1105510-mRNA-1;Parent=Msa1105510;Name=Msa1105510-mRNA-1;_AED=0.16;_eAED=0.16;_QI=122\|1\|1\|1\|0.8\|0.66\|6\|258\|246
chr7_3	exon	44035739	44035831	44035739	ID=Msa1105510-mRNA-1:exon:9081;Parent=Msa1105510-mRNA-1
chr7_3	exon	44035857	44036237	44035857	ID=Msa1105510-mRNA-1:exon:9080;Parent=Msa1105510-mRNA-1
chr7_3	exon	44036329	44036431	44036329	ID=Msa1105510-mRNA-1:exon:9079;Parent=Msa1105510-mRNA-1
chr7_3	exon	44037266	44037403	44037266	ID=Msa1105510-mRNA-1:exon:9078;Parent=Msa1105510-mRNA-1
chr7_3	exon	44037492	44037589	44037492	ID=Msa1105510-mRNA-1:exon:9077;Parent=Msa1105510-mRNA-1
chr7_3	exon	44037734	44038041	44037734	ID=Msa1105510-mRNA-1:exon:9076;Parent=Msa1105510-mRNA-1
chr7_3	five_prime_UTR	44037920	44038041	44037920	ID=Msa1105510-mRNA-1:five_prime_utr;Parent=Msa1105510-mRNA-1
chr7_3	CDS	44037734	44037919	44037734	ID=Msa1105510-mRNA-1:cds;Parent=Msa1105510-mRNA-1
chr7_3	CDS	44037492	44037589	44037492	ID=Msa1105510-mRNA-1:cds;Parent=Msa1105510-mRNA-1
chr7_3	CDS	44037266	44037403	44037266	ID=Msa1105510-mRNA-1:cds;Parent=Msa1105510-mRNA-1
chr7_3	CDS	44036329	44036431	44036329	ID=Msa1105510-mRNA-1:cds;Parent=Msa1105510-mRNA-1
chr7_3	CDS	44036022	44036237	44036022	ID=Msa1105510-mRNA-1:cds;Parent=Msa1105510-mRNA-1
chr7_3	three_prime_UTR	44035857	44036021	44035857	ID=Msa1105510-mRNA-1:three_prime_utr;Parent=Msa1105510-mRNA-1
chr7_3	three_prime_UTR	44035739	44035831	44035739	ID=Msa1105510-mRNA-1:three_prime_utr;Parent=Msa1105510-mRNA-1

Gene Sequence

>Msa1105510

ATGGCTGAAGAGGAACAACCAAAGGATCTCAACTATATTCCAGAGGTTATATTGAAGAAGAGGAAACACAGTGAAGCATGGGCCTTGAGTAAAAAGGCGCAACTCCAGAAAAAAAGTTTCCAGCTCAGGAAGAGCAAGGACTTCATAAAAAAGCCCGAGGATTTCATTTTTGAATACCGCAACAGGGAGATTGACCTTATTAGAATGAAACGAAGGGTCAAGTGGAGACGGGGAGATAAATCGAGGCCAAGCAACAAGCCCATAATAGTCATTCGTATACAGGGGAAACAAGACATGCATGCTACTACCAGAAAGCACTTGTTCAGTTTGGGATTGAGAAGAATATTCAGTGCTGTCTTTGTGAAGCCAACTGATGGAGTGATGGCCAAGCTGGCGAGAGTTGAACCATATGTCACCTATGGATATGCAAATCTTAAAACCATAAAGGAGCTGATTTACAAGAAGGGACATGCAAAAATAGACAAGCGAAAAGTTCCTTTGACAGACAATAACCTTATTGAGCAGGAATTGGGAAAGTTTGGTATTGTATGCATAGAAGACATTGTGCATCAAATTGACAATGTTGGTCCACACTTCAAGGAAGTTGTCCGATTTATGTGGCCCTTTGAACTGAACAAGCCAGCAGAGGGATTAAAAGGATTGAAAAACCGATACAAGGATGGTGGAGATTCAGGGGACCGTGAGGATCTCATCAACGAGCTCATCAACAAAATGAATTGA

Protein sequence

>Msa1105510

MAEEEQPKDLNYIPEVILKKRKHSEAWALSKKAQLQKKSFQLRKSKDFIKKPEDFIFEYRNREIDLIRMKRRVKWRRGDKSRPSNKPIIVIRIQGKQDMHATTRKHLFSLGLRRIFSAVFVKPTDGVMAKLARVEPYVTYGYANLKTIKELIYKKGHAKIDKRKVPLTDNNLIEQELGKFGIVCIEDIVHQIDNVGPHFKEVVRFMWPFELNKPAEGLKGLKNRYKDGGDSGDREDLINELINKMN*