Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329750 | sp|Q9NYV6|RRN3_HUMAN | 28.872 | 523 | 317 | 16 | 85 | 572 | 107 | 609 | 4.13e-39 | 156 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329750 | A0A072UQX1 | 96.850 | 635 | 19 | 1 | 1 | 634 | 1 | 635 | 0.0 | 1264 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044990 | Msa1329750 | 0.801117 | 1.047642e-48 | -8.615850e-47 |
| Msa0067590 | Msa1329750 | -0.816707 | 4.812378e-52 | -8.615850e-47 |
| Msa0072420 | Msa1329750 | 0.818176 | 2.247057e-52 | -8.615850e-47 |
| Msa0115870 | Msa1329750 | 0.806209 | 9.194291e-50 | -8.615850e-47 |
| Msa0626920 | Msa1329750 | 0.809567 | 1.775071e-50 | -8.615850e-47 |
| Msa0712860 | Msa1329750 | 0.819068 | 1.410333e-52 | -8.615850e-47 |
| Msa0800480 | Msa1329750 | 0.820880 | 5.428849e-53 | -8.615850e-47 |
| Msa0828590 | Msa1329750 | 0.818603 | 1.798426e-52 | -8.615850e-47 |
| Msa0120880 | Msa1329750 | 0.837329 | 5.541523e-57 | -8.615850e-47 |
| Msa0140770 | Msa1329750 | -0.804335 | 2.270093e-49 | -8.615850e-47 |
| Msa1235610 | Msa1329750 | 0.845882 | 3.078518e-59 | -8.615850e-47 |
| Msa1259290 | Msa1329750 | 0.818054 | 2.394360e-52 | -8.615850e-47 |
| Msa1277260 | Msa1329750 | 0.878362 | 2.987158e-69 | -8.615850e-47 |
| Msa1300620 | Msa1329750 | 0.849845 | 2.489271e-60 | -8.615850e-47 |
| Msa1315890 | Msa1329750 | 0.855553 | 5.840529e-62 | -8.615850e-47 |
| Msa1329730 | Msa1329750 | 0.904668 | 9.649254e-80 | -8.615850e-47 |
| Msa1329750 | Msa1364350 | -0.806314 | 8.734373e-50 | -8.615850e-47 |
| Msa1329750 | Msa1365140 | 0.826234 | 3.033862e-54 | -8.615850e-47 |
| Msa1329750 | Msa1376660 | 0.811555 | 6.602859e-51 | -8.615850e-47 |
| Msa1329750 | Msa1385720 | 0.805251 | 1.460613e-49 | -8.615850e-47 |
| Msa1329750 | Msa1411970 | 0.806108 | 9.654520e-50 | -8.615850e-47 |
| Msa1329750 | Msa1420430 | 0.811506 | 6.767152e-51 | -8.615850e-47 |
| Msa1329750 | Msa1434090 | 0.809034 | 2.310222e-50 | -8.615850e-47 |
| Msa1329750 | Msa1435390 | 0.845680 | 3.491809e-59 | -8.615850e-47 |
| Msa1329750 | Msa1440930 | 0.804464 | 2.133094e-49 | -8.615850e-47 |
| Msa1329750 | Msa1445370 | 0.815100 | 1.098809e-51 | -8.615850e-47 |
| Msa0385500 | Msa1329750 | 0.808570 | 2.902384e-50 | -8.615850e-47 |
| Msa0437020 | Msa1329750 | 0.800078 | 1.706367e-48 | -8.615850e-47 |
| Msa0462600 | Msa1329750 | 0.825538 | 4.439893e-54 | -8.615850e-47 |
| Msa0479760 | Msa1329750 | -0.805173 | 1.516647e-49 | -8.615850e-47 |
| Msa1021520 | Msa1329750 | 0.849388 | 3.339361e-60 | -8.615850e-47 |
| Msa1039810 | Msa1329750 | 0.801390 | 9.209309e-49 | -8.615850e-47 |
| Msa1085420 | Msa1329750 | 0.836116 | 1.130057e-56 | -8.615850e-47 |
| Msa0343500 | Msa1329750 | 0.872658 | 2.686204e-67 | -8.615850e-47 |
| Msa1118860 | Msa1329750 | 0.819027 | 1.440419e-52 | -8.615850e-47 |
| Msa1123770 | Msa1329750 | 0.806075 | 9.808940e-50 | -8.615850e-47 |
| Msa1128270 | Msa1329750 | 0.803222 | 3.863389e-49 | -8.615850e-47 |
| Msa1128280 | Msa1329750 | 0.837327 | 5.548560e-57 | -8.615850e-47 |
| Msa1147650 | Msa1329750 | 0.812739 | 3.643441e-51 | -8.615850e-47 |
| Msa1165270 | Msa1329750 | 0.837400 | 5.314643e-57 | -8.615850e-47 |
| Msa1169910 | Msa1329750 | 0.804188 | 2.434809e-49 | -8.615850e-47 |
| Msa1175350 | Msa1329750 | 0.812632 | 3.845358e-51 | -8.615850e-47 |
| Msa1210900 | Msa1329750 | 0.816218 | 6.192358e-52 | -8.615850e-47 |
| Msa0531230 | Msa1329750 | 0.802217 | 6.228683e-49 | -8.615850e-47 |
| Msa0881530 | Msa1329750 | -0.802100 | 6.584040e-49 | -8.615850e-47 |
| Msa0958000 | Msa1329750 | 0.810361 | 1.197590e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329750 | MtrunA17_Chr4g0066001 | 96.850 | 635 | 19 | 1 | 1 | 634 | 1 | 635 | 0.0 | 1264 |
| Msa1329750 | MtrunA17_Chr8g0378781 | 79.221 | 77 | 16 | 0 | 205 | 281 | 1 | 77 | 2.54e-35 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1329750 | AT2G34750.1 | 45.774 | 627 | 296 | 12 | 17 | 633 | 21 | 613 | 4.75e-174 | 509 |
| Msa1329750 | AT1G30590.2 | 45.673 | 624 | 299 | 13 | 17 | 634 | 17 | 606 | 2.37e-169 | 496 |
| Msa1329750 | AT1G30590.3 | 45.673 | 624 | 299 | 13 | 17 | 634 | 17 | 606 | 2.37e-169 | 496 |
| Msa1329750 | AT1G30590.1 | 45.673 | 624 | 296 | 14 | 17 | 634 | 17 | 603 | 3.04e-167 | 491 |
| Msa1329750 | AT2G39240.2 | 40.126 | 633 | 288 | 15 | 17 | 629 | 7 | 568 | 6.90e-126 | 384 |
| Msa1329750 | AT2G39240.1 | 40.126 | 633 | 288 | 15 | 17 | 629 | 7 | 568 | 6.90e-126 | 384 |
Find 151 sgRNAs with CRISPR-Local
Find 522 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTATGAAATATGGGTTTC+AGG | 0.216795 | 8_4:-48544969 | Msa1329750:CDS |
| ACGCCCAAATCTATGAAATA+TGG | 0.220265 | 8_4:-48544977 | Msa1329750:CDS |
| AGAAATTCAAAGGCGTATTT+AGG | 0.222570 | 8_4:+48551318 | None:intergenic |
| AAACCCATATTTCATAGATT+TGG | 0.238800 | 8_4:+48544973 | None:intergenic |
| TGCTTAGATGCAACTGATAT+TGG | 0.257776 | 8_4:-48544507 | Msa1329750:three_prime_UTR |
| ATTCCTGAGTTAGGGTTCTA+AGG | 0.266222 | 8_4:-48552315 | Msa1329750:five_prime_UTR |
| CAACGAAGATTTATCTGTTA+TGG | 0.271233 | 8_4:-48552265 | Msa1329750:CDS |
| TCCTGGTTGTAGGTGGAAAT+TGG | 0.276044 | 8_4:-48550451 | Msa1329750:intron |
| TAGCTATTGTAGCATTTGTT+TGG | 0.302237 | 8_4:-48544552 | Msa1329750:three_prime_UTR |
| AACCCATATTTCATAGATTT+GGG | 0.308026 | 8_4:+48544974 | None:intergenic |
| GGCTCCTTAGCGAAACGTTT+TGG | 0.310138 | 8_4:+48551168 | None:intergenic |
| GTTAGGGTTCTAAGGGAGTA+TGG | 0.319269 | 8_4:-48552307 | Msa1329750:exon |
| AGGATTAAGATTCCTGAGTT+AGG | 0.324453 | 8_4:-48552324 | Msa1329750:five_prime_UTR |
| TTCAACAAACATGGATCAAA+TGG | 0.328326 | 8_4:+48545358 | None:intergenic |
| AGAAAATGAGCACTCCTATT+GGG | 0.330086 | 8_4:-48544810 | Msa1329750:three_prime_UTR |
| AAATGCCCATGGAGCTAATC+TGG | 0.332385 | 8_4:-48545740 | Msa1329750:CDS |
| ATGCTTGAGAGCGGTGAAAT+TGG | 0.343084 | 8_4:-48550608 | Msa1329750:CDS |
| GTACCACAGAGTTGTTAAAT+AGG | 0.350184 | 8_4:-48547129 | Msa1329750:CDS |
| TCACGACGCTGCTAAACTTT+TGG | 0.352317 | 8_4:-48551879 | Msa1329750:intron |
| GGCATACTGTGGACAACTAT+AGG | 0.373269 | 8_4:+48551189 | None:intergenic |
| GCGGATCTTTCCAAGGCTTT+CGG | 0.378275 | 8_4:-48545409 | Msa1329750:CDS |
| CCCTAAAATTGGTGAGAGTC+AGG | 0.383755 | 8_4:+48552446 | None:intergenic |
| TGGAGTTGACATGAAGAATA+AGG | 0.387882 | 8_4:-48551283 | Msa1329750:CDS |
| TAAATTGTTTGTTACCTTCA+AGG | 0.387978 | 8_4:+48545701 | None:intergenic |
| GGATATGAATGATTATGATA+TGG | 0.391946 | 8_4:-48545056 | Msa1329750:CDS |
| TCTGAAACACATAGCTGATT+TGG | 0.393971 | 8_4:-48551238 | Msa1329750:CDS |
| TAGAAAATGAGCACTCCTAT+TGG | 0.404787 | 8_4:-48544811 | Msa1329750:three_prime_UTR |
| AAGCGGCATTACCTAGTAAT+AGG | 0.412363 | 8_4:+48546626 | None:intergenic |
| AGTAGAGGAATTTCTAAAAC+AGG | 0.414435 | 8_4:-48545491 | Msa1329750:CDS |
| CGCCCAAATCTATGAAATAT+GGG | 0.416002 | 8_4:-48544976 | Msa1329750:CDS |
| AAAATTTACACCACATCCTT+CGG | 0.424276 | 8_4:+48546691 | None:intergenic |
| GGATTAAGATTCCTGAGTTA+GGG | 0.426266 | 8_4:-48552323 | Msa1329750:five_prime_UTR |
| TATTAATACTTACAAGATAG+TGG | 0.427707 | 8_4:+48544690 | None:intergenic |
| CGAGCTCGTAAGTAAACTTA+GGG | 0.437323 | 8_4:-48552492 | Msa1329750:five_prime_UTR |
| GAACAATTTGCAAGGCAATC+AGG | 0.437527 | 8_4:-48547107 | Msa1329750:CDS |
| GCTTGAGCTCATCGTGTCAT+TGG | 0.439526 | 8_4:-48551502 | Msa1329750:intron |
| CTTTCGCATGAGATCATTGA+TGG | 0.440574 | 8_4:-48545793 | Msa1329750:CDS |
| ATAAGCTTCACTTTAAGTCT+AGG | 0.441192 | 8_4:+48545765 | None:intergenic |
| AAAACTACAACTGCCCCAAT+AGG | 0.447061 | 8_4:+48544796 | None:intergenic |
| GCGAGCTCGTAAGTAAACTT+AGG | 0.450208 | 8_4:-48552493 | Msa1329750:five_prime_UTR |
| AAATTGTTTGTTACCTTCAA+GGG | 0.451283 | 8_4:+48545702 | None:intergenic |
| TGACCATCTCCAGCTACTTA+AGG | 0.454991 | 8_4:-48545195 | Msa1329750:intron |
| AGCTTTCGAGATTGAGCTTG+TGG | 0.456347 | 8_4:-48551578 | Msa1329750:CDS |
| GGGATTATGCTCCAACTGAT+AGG | 0.461972 | 8_4:-48551557 | Msa1329750:CDS |
| GAAGTTTCTTTCATCTGAGT+TGG | 0.464213 | 8_4:-48546308 | Msa1329750:CDS |
| GTGTTAATCCTCCTATTACT+AGG | 0.469232 | 8_4:-48546637 | Msa1329750:intron |
| AACGAGGAGCTCAGTGATAG+TGG | 0.472727 | 8_4:-48545121 | Msa1329750:CDS |
| TAAGATAGAAATTCAAGTCC+AGG | 0.475118 | 8_4:+48544590 | None:intergenic |
| TGGATGGGATGGCAAGATAC+AGG | 0.478954 | 8_4:-48550431 | Msa1329750:CDS |
| ATTTATCCCACCGAAAGCCT+TGG | 0.486236 | 8_4:+48545399 | None:intergenic |
| AGAAATTCCTCTACTACGCT+AGG | 0.486325 | 8_4:+48545499 | None:intergenic |
| GCTTTCGAGATTGAGCTTGT+GGG | 0.486729 | 8_4:-48551577 | Msa1329750:CDS |
| ATGTTTCCAGATTAGCTCCA+TGG | 0.488983 | 8_4:+48545734 | None:intergenic |
| CTATCTCATAAACGAGCGTT+AGG | 0.489500 | 8_4:+48552549 | None:intergenic |
| GATAAATCTTCGTTGACAAT+CGG | 0.489575 | 8_4:+48552273 | None:intergenic |
| AGATACCCTTCTTGCAGTCT+CGG | 0.490560 | 8_4:-48552196 | Msa1329750:intron |
| GTGATAATCGCAAGGGAGCA+AGG | 0.492980 | 8_4:+48551211 | None:intergenic |
| GATCTTTCCAAGGCTTTCGG+TGG | 0.493557 | 8_4:-48545406 | Msa1329750:CDS |
| CTCCATTGCAAATATGCACT+TGG | 0.495884 | 8_4:+48550402 | None:intergenic |
| GGTGAAATTGGAGAAATTGT+TGG | 0.498711 | 8_4:-48550596 | Msa1329750:CDS |
| GAAGCGATTCATGCTGGATA+GGG | 0.499853 | 8_4:+48551701 | None:intergenic |
| ATGAATGATTATGATATGGC+CGG | 0.501292 | 8_4:-48545052 | Msa1329750:CDS |
| AGAAGCGATTCATGCTGGAT+AGG | 0.502609 | 8_4:+48551700 | None:intergenic |
| GAAGAATAAGGTTCTGCCTC+GGG | 0.505488 | 8_4:-48551271 | Msa1329750:CDS |
| ACATAAATTGAATCCCTTGA+AGG | 0.505777 | 8_4:-48545715 | Msa1329750:intron |
| TTCCTGAGTTAGGGTTCTAA+GGG | 0.506384 | 8_4:-48552314 | Msa1329750:five_prime_UTR |
| GCATCATATTTCCTATCAGT+TGG | 0.506860 | 8_4:+48551546 | None:intergenic |
| ATTCTCGTGGTTCAGGATGG+TGG | 0.508749 | 8_4:-48551956 | Msa1329750:intron |
| ATAGCAAATCTTTGACGCCC+TGG | 0.510303 | 8_4:-48544608 | Msa1329750:three_prime_UTR |
| ATTAATACTTACAAGATAGT+GGG | 0.511025 | 8_4:+48544691 | None:intergenic |
| AAGAAAGAAGCGATTCATGC+TGG | 0.512789 | 8_4:+48551695 | None:intergenic |
| TTTCATAGATTTGGGCGTGA+TGG | 0.514294 | 8_4:+48544982 | None:intergenic |
| AGCTCGCGTAGTACTTGCCT+TGG | 0.516428 | 8_4:+48552509 | None:intergenic |
| TAAAACATTACAAAATTGAC+AGG | 0.517336 | 8_4:+48544867 | None:intergenic |
| TGTTTCCAGATTAGCTCCAT+GGG | 0.520405 | 8_4:+48545735 | None:intergenic |
| CGAGTGGAGTGCAGAAGCCA+AGG | 0.524496 | 8_4:-48552526 | Msa1329750:five_prime_UTR |
| ATCAACTTATCCACAAGTGC+AGG | 0.525390 | 8_4:+48550560 | None:intergenic |
| GCTCGAGGCGGATCTTTCCA+AGG | 0.526827 | 8_4:-48545416 | Msa1329750:CDS |
| ATATGATGCAGCTGATATCA+TGG | 0.528281 | 8_4:-48551532 | Msa1329750:CDS |
| AGATTTATCTGTTATGGAGG+AGG | 0.529140 | 8_4:-48552259 | Msa1329750:CDS |
| GGTTGTAGGTGGAAATTGGA+TGG | 0.531254 | 8_4:-48550447 | Msa1329750:intron |
| TAGGTGGAAATTGGATGGGA+TGG | 0.531448 | 8_4:-48550442 | Msa1329750:CDS |
| TCAACAAACATGGATCAAAT+GGG | 0.531713 | 8_4:+48545359 | None:intergenic |
| ATATGGGTTTCAGGCACAGA+TGG | 0.533433 | 8_4:-48544960 | Msa1329750:CDS |
| TACAATGCTACCTGCACTTG+TGG | 0.534558 | 8_4:-48550570 | Msa1329750:CDS |
| ATCTTTCCAAGGCTTTCGGT+GGG | 0.536074 | 8_4:-48545405 | Msa1329750:CDS |
| AATTCAAAGGCGTATTTAGG+AGG | 0.538124 | 8_4:+48551321 | None:intergenic |
| TGTGGATAAGTTGATAGAGT+TGG | 0.541891 | 8_4:-48550552 | Msa1329750:CDS |
| TGATAATCGCAAGGGAGCAA+GGG | 0.543178 | 8_4:+48551212 | None:intergenic |
| TAGCATTTGTTTGGAGCTAG+AGG | 0.547346 | 8_4:-48544543 | Msa1329750:three_prime_UTR |
| GGAATTTCTAAAACAGGCAA+AGG | 0.549923 | 8_4:-48545485 | Msa1329750:CDS |
| TAAAACAGGCAAAGGCTGCT+CGG | 0.551011 | 8_4:-48545477 | Msa1329750:CDS |
| CTTGACCAGCGGACAAAATG+TGG | 0.555293 | 8_4:+48545172 | None:intergenic |
| TCTTGAATGCTGTCAAAGCA+AGG | 0.555849 | 8_4:-48547041 | Msa1329750:CDS |
| AACTATAGGTGATAATCGCA+AGG | 0.557758 | 8_4:+48551203 | None:intergenic |
| GGTTTCAGGCACAGATGGAA+GGG | 0.558054 | 8_4:-48544955 | Msa1329750:CDS |
| GGGTTTCAGGCACAGATGGA+AGG | 0.558736 | 8_4:-48544956 | Msa1329750:CDS |
| TGAAGAATAAGGTTCTGCCT+CGG | 0.559544 | 8_4:-48551272 | Msa1329750:CDS |
| TCTCATAAACGAGCGTTAGG+AGG | 0.560084 | 8_4:+48552552 | None:intergenic |
| CTGTCAAAGCAAGGGCCGAT+TGG | 0.561772 | 8_4:-48547032 | Msa1329750:CDS |
| AAGCAAGGGCCGATTGGCTG+AGG | 0.562906 | 8_4:-48547026 | Msa1329750:intron |
| TTGGGAATACCTCAGCCAAT+CGG | 0.566052 | 8_4:+48547017 | None:intergenic |
| CGAAGATTTATCTGTTATGG+AGG | 0.567769 | 8_4:-48552262 | Msa1329750:CDS |
| TCAGTTACCTCAACAGTGAA+AGG | 0.568367 | 8_4:+48544745 | None:intergenic |
| TTAAATAGGAACAATTTGCA+AGG | 0.569913 | 8_4:-48547115 | Msa1329750:CDS |
| TGCCAAGTGCATATTTGCAA+TGG | 0.570882 | 8_4:-48550404 | Msa1329750:CDS |
| AGCATTTGTTTGGAGCTAGA+GGG | 0.572070 | 8_4:-48544542 | Msa1329750:three_prime_UTR |
| TTAGGGTTCTAAGGGAGTAT+GGG | 0.573209 | 8_4:-48552306 | Msa1329750:exon |
| AAGACCCGCTTCAACACTCC+CGG | 0.576390 | 8_4:+48545033 | None:intergenic |
| GATGTTCTATGCATGCGCAT+TGG | 0.580066 | 8_4:-48546717 | Msa1329750:CDS |
| TGAATGATTATGATATGGCC+GGG | 0.586844 | 8_4:-48545051 | Msa1329750:CDS |
| AAGATAGAAATTCAAGTCCA+GGG | 0.590326 | 8_4:+48544591 | None:intergenic |
| ATGCTGGATAGGGTCAATGT+AGG | 0.592083 | 8_4:+48551711 | None:intergenic |
| ACTGTTGAGGTAACTGAACA+TGG | 0.597240 | 8_4:-48544739 | Msa1329750:three_prime_UTR |
| CGGCATTACCTAGTAATAGG+AGG | 0.597341 | 8_4:+48546629 | None:intergenic |
| GAAAATGAGCACTCCTATTG+GGG | 0.597361 | 8_4:-48544809 | Msa1329750:three_prime_UTR |
| ACTATCACTGAGCTCCTCGT+TGG | 0.597389 | 8_4:+48545123 | None:intergenic |
| ATGTTTGCCTAGCGTAGTAG+AGG | 0.599342 | 8_4:-48545506 | Msa1329750:CDS |
| GCTTACCGAGACTGCAAGAA+GGG | 0.601568 | 8_4:+48552191 | None:intergenic |
| GTTGTAGGTGGAAATTGGAT+GGG | 0.602234 | 8_4:-48550446 | Msa1329750:intron |
| ATTTCACTTTCGATCACACA+AGG | 0.602906 | 8_4:+48544481 | None:intergenic |
| CTCGTTTATGAGATAGCGAG+TGG | 0.603951 | 8_4:-48552542 | Msa1329750:five_prime_UTR |
| ATGGCCGGGAGTGTTGAAGC+GGG | 0.607938 | 8_4:-48545037 | Msa1329750:CDS |
| GAAGCTTATCAAAATGCCCA+TGG | 0.616331 | 8_4:-48545751 | Msa1329750:CDS |
| GGCTTACCGAGACTGCAAGA+AGG | 0.617000 | 8_4:+48552190 | None:intergenic |
| TATGCCAAAACGTTTCGCTA+AGG | 0.621248 | 8_4:-48551172 | Msa1329750:CDS |
| CTCCCTTAGAACCCTAACTC+AGG | 0.623281 | 8_4:+48552312 | None:intergenic |
| TTCAGAGCAGCATGCACCCG+AGG | 0.627619 | 8_4:+48551255 | None:intergenic |
| ATACAAGTCAAAATTTGCCC+AGG | 0.628013 | 8_4:-48546844 | Msa1329750:intron |
| GAAATTGGAGAAATTGTTGG+TGG | 0.630468 | 8_4:-48550593 | Msa1329750:CDS |
| GATAATCGCAAGGGAGCAAG+GGG | 0.631795 | 8_4:+48551213 | None:intergenic |
| CTTGAATGCTGTCAAAGCAA+GGG | 0.633580 | 8_4:-48547040 | Msa1329750:CDS |
| TCGCATGAGATCATTGATGG+AGG | 0.634684 | 8_4:-48545790 | Msa1329750:CDS |
| GTTCCTATTTAACAACTCTG+TGG | 0.638060 | 8_4:+48547126 | None:intergenic |
| GTTTGTTGAAGAAAAGTGAA+AGG | 0.640363 | 8_4:-48545345 | Msa1329750:intron |
| GAGCTCGTAAGTAAACTTAG+GGG | 0.642338 | 8_4:-48552491 | Msa1329750:five_prime_UTR |
| AGCTCGTAAGTAAACTTAGG+GGG | 0.643327 | 8_4:-48552490 | Msa1329750:five_prime_UTR |
| TATGGCCGGGAGTGTTGAAG+CGG | 0.646112 | 8_4:-48545038 | Msa1329750:CDS |
| GCATGCGCATTGGATTCCGA+AGG | 0.647857 | 8_4:-48546707 | Msa1329750:CDS |
| TGGTTGCTAACATCATACAA+AGG | 0.652099 | 8_4:-48546288 | Msa1329750:intron |
| TTAATACTTACAAGATAGTG+GGG | 0.654456 | 8_4:+48544692 | None:intergenic |
| GCATTGGATTCCGAAGGATG+TGG | 0.661172 | 8_4:-48546701 | Msa1329750:CDS |
| AAACATCTCTGTGAGGACCA+TGG | 0.662377 | 8_4:+48546667 | None:intergenic |
| GCTCGTAAGTAAACTTAGGG+GGG | 0.687390 | 8_4:-48552489 | Msa1329750:five_prime_UTR |
| TTTCGATGATTTGCTCGAGG+CGG | 0.688171 | 8_4:-48545428 | Msa1329750:CDS |
| ACTATAGGTGATAATCGCAA+GGG | 0.699606 | 8_4:+48551204 | None:intergenic |
| ATGGGATGGCAAGATACAGG+AGG | 0.711153 | 8_4:-48550428 | Msa1329750:CDS |
| GCAGCTACTTATCAACACAA+TGG | 0.714076 | 8_4:-48544839 | Msa1329750:three_prime_UTR |
| ATGAATCAAACATCTCTGTG+AGG | 0.746973 | 8_4:+48546660 | None:intergenic |
| AATATGTTAATGCTTGAGAG+CGG | 0.775120 | 8_4:-48550617 | Msa1329750:CDS |
| ATATGATACATATGCCAACG+AGG | 0.781154 | 8_4:-48545137 | Msa1329750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTTGATACTATTTTAAT+AGG | - | chr8_4:48545287-48545306 | Msa1329750:intron | 10.0% |
| !! | TTAAATAGATAACATAATAT+TGG | + | chr8_4:48546791-48546810 | None:intergenic | 10.0% |
| !!! | ATTTAAATATTAACTTGTTT+TGG | - | chr8_4:48549465-48549484 | Msa1329750:intron | 10.0% |
| !!! | TTTAAATATTAACTTGTTTT+GGG | - | chr8_4:48549466-48549485 | Msa1329750:intron | 10.0% |
| !!! | ATAATTCAATTAGGTTTTAA+CGG | - | chr8_4:48544720-48544739 | Msa1329750:three_prime_UTR | 15.0% |
| !! | TAACCAATAAATATCATTAA+AGG | - | chr8_4:48545096-48545115 | Msa1329750:CDS | 15.0% |
| !! | TCATATACATAAATAAAATG+TGG | + | chr8_4:48545336-48545355 | None:intergenic | 15.0% |
| !! | AAGTTCAATAAATATTTGAA+TGG | + | chr8_4:48545684-48545703 | None:intergenic | 15.0% |
| !!! | AATATATGTTGATTTTTGTT+TGG | - | chr8_4:48545742-48545761 | Msa1329750:CDS | 15.0% |
| !! | GACAAATAGAATTAATTTAT+TGG | + | chr8_4:48546640-48546659 | None:intergenic | 15.0% |
| !!! | AGTATTTTTTGTTGAAATTT+GGG | + | chr8_4:48547131-48547150 | None:intergenic | 15.0% |
| !!! | AAGTATTTTTTGTTGAAATT+TGG | + | chr8_4:48547132-48547151 | None:intergenic | 15.0% |
| !!! | TTAATAGCTTAACTTTTTTA+AGG | - | chr8_4:48547213-48547232 | Msa1329750:intron | 15.0% |
| !! | AATGATAAGTTATTAAAGAA+CGG | - | chr8_4:48549363-48549382 | Msa1329750:intron | 15.0% |
| !!! | GTTAATATTTAAATTTTCAC+AGG | + | chr8_4:48549459-48549478 | None:intergenic | 15.0% |
| !! | AAAAAAACTAACCCTAAAAT+TGG | + | chr8_4:48544677-48544696 | None:intergenic | 20.0% |
| !!! | ATATTTTATCTAAACATTGC+AGG | - | chr8_4:48544765-48544784 | Msa1329750:three_prime_UTR | 20.0% |
| !! | CTTCCTTTAATGATATTTAT+TGG | + | chr8_4:48545102-48545121 | None:intergenic | 20.0% |
| !!! | ATAAACTATAAACTGATTCT+TGG | - | chr8_4:48545460-48545479 | Msa1329750:CDS | 20.0% |
| !!! | AGCAAGATAATTTTATGATA+TGG | - | chr8_4:48545484-48545503 | Msa1329750:CDS | 20.0% |
| !! | TAAAATTACTGAGATATTGT+TGG | + | chr8_4:48545654-48545673 | None:intergenic | 20.0% |
| !!! | AATATCTCAGTAATTTTAGA+TGG | - | chr8_4:48545656-48545675 | Msa1329750:intron | 20.0% |
| !!! | ATATCTCAGTAATTTTAGAT+GGG | - | chr8_4:48545657-48545676 | Msa1329750:intron | 20.0% |
| !!! | CGTTTTGATTTCAAATATAA+TGG | - | chr8_4:48546305-48546324 | Msa1329750:CDS | 20.0% |
| !! | ACTTATTCGAATAATGATAA+AGG | - | chr8_4:48546332-48546351 | Msa1329750:CDS | 20.0% |
| !! | CTTATTCGAATAATGATAAA+GGG | - | chr8_4:48546333-48546352 | Msa1329750:CDS | 20.0% |
| !! | TTGACAAATTAAAGCAAAAA+TGG | + | chr8_4:48546378-48546397 | None:intergenic | 20.0% |
| !!! | TGTTAAAGAAATCTAGTTTT+AGG | + | chr8_4:48546405-48546424 | None:intergenic | 20.0% |
| !! | TAAATTAATTCTATTTGTCC+TGG | - | chr8_4:48546641-48546660 | Msa1329750:CDS | 20.0% |
| !!! | TGATGAGAAATATTTTAGTA+TGG | - | chr8_4:48546759-48546778 | Msa1329750:intron | 20.0% |
| !!! | AGAAATATTTTAGTATGGTA+TGG | - | chr8_4:48546764-48546783 | Msa1329750:intron | 20.0% |
| !!! | GTATTTTTTGTTGAAATTTG+GGG | + | chr8_4:48547130-48547149 | None:intergenic | 20.0% |
| !!! | TTATTTTTTGTTGCAATTTG+TGG | + | chr8_4:48547249-48547268 | None:intergenic | 20.0% |
| !!! | AAAAGTTAAGCTATTTTAGA+TGG | + | chr8_4:48547447-48547466 | None:intergenic | 20.0% |
| !!! | CTAAAATAGCTTAACTTTTT+TGG | - | chr8_4:48547448-48547467 | Msa1329750:intron | 20.0% |
| !! | TTATAAAATGTCAATGTTTG+AGG | - | chr8_4:48547691-48547710 | Msa1329750:intron | 20.0% |
| !! | AAAGAATGAAAAAATGACAT+AGG | - | chr8_4:48548943-48548962 | Msa1329750:intron | 20.0% |
| !! | ATAGACAAATCTTATAATAC+AGG | + | chr8_4:48549233-48549252 | None:intergenic | 20.0% |
| !! | TGGAATAATTAAATAGCAAA+TGG | - | chr8_4:48549309-48549328 | Msa1329750:intron | 20.0% |
| !! | ATAATTAAATAGCAAATGGA+TGG | - | chr8_4:48549313-48549332 | Msa1329750:intron | 20.0% |
| !!! | GTTTGAATTTCTTTTACAAA+AGG | - | chr8_4:48549517-48549536 | Msa1329750:intron | 20.0% |
| !! | TCAATAAACAATTTCTTTCA+AGG | + | chr8_4:48549670-48549689 | None:intergenic | 20.0% |
| !!! | ATTTAACAGTAACAAGTTTT+TGG | - | chr8_4:48549746-48549765 | Msa1329750:intron | 20.0% |
| !! | TGTTGTATTTATCATACATA+AGG | - | chr8_4:48549773-48549792 | Msa1329750:intron | 20.0% |
| !! | ATTATTAGCATGTTATAACT+TGG | - | chr8_4:48549935-48549954 | Msa1329750:intron | 20.0% |
| !! | GTTAATTGAATAACTTGATT+AGG | - | chr8_4:48550196-48550215 | Msa1329750:intron | 20.0% |
| !! | AAAACACATTAATGTCAATA+GGG | + | chr8_4:48551108-48551127 | None:intergenic | 20.0% |
| !! | AAAAACACATTAATGTCAAT+AGG | + | chr8_4:48551109-48551128 | None:intergenic | 20.0% |
| !!! | TGTTCTCATTTTATTTGTTT+TGG | - | chr8_4:48551264-48551283 | Msa1329750:CDS | 20.0% |
| !! | TAAAACATTACAAAATTGAC+AGG | + | chr8_4:48552245-48552264 | None:intergenic | 20.0% |
| !!! | TGTCAATTTTGTAATGTTTT+AGG | - | chr8_4:48552244-48552263 | Msa1329750:CDS | 20.0% |
| !! | ATTAATACTTACAAGATAGT+GGG | + | chr8_4:48552421-48552440 | None:intergenic | 20.0% |
| !! | TATTAATACTTACAAGATAG+TGG | + | chr8_4:48552422-48552441 | None:intergenic | 20.0% |
| !!! | AAAAGAGTCTGAGATTTTTA+GGG | + | chr8_4:48544534-48544553 | None:intergenic | 25.0% |
| ! | AATATTCTCAGCAATCAAAA+GGG | + | chr8_4:48544750-48544769 | None:intergenic | 25.0% |
| ! | AAATATTCTCAGCAATCAAA+AGG | + | chr8_4:48544751-48544770 | None:intergenic | 25.0% |
| ! | AGACACAAAACAATAATTTG+AGG | + | chr8_4:48545015-48545034 | None:intergenic | 25.0% |
| !!! | ATACTATTTTAATAGGCCTA+TGG | - | chr8_4:48545294-48545313 | Msa1329750:intron | 25.0% |
| !! | TATCTCAGTAATTTTAGATG+GGG | - | chr8_4:48545658-48545677 | Msa1329750:intron | 25.0% |
| !! | CTTTGAATTTCTGAAAAATG+CGG | - | chr8_4:48545802-48545821 | Msa1329750:CDS | 25.0% |
| ! | AATTTGCATTTCCAGTATAA+GGG | - | chr8_4:48545973-48545992 | Msa1329750:intron | 25.0% |
| ! | TTTGACTGAAAATTTGACAA+GGG | + | chr8_4:48546598-48546617 | None:intergenic | 25.0% |
| ! | AATACGATATTGAAACATGT+TGG | - | chr8_4:48546900-48546919 | Msa1329750:intron | 25.0% |
| !! | TCACTTAATAGCTTAACTTT+TGG | - | chr8_4:48547159-48547178 | Msa1329750:intron | 25.0% |
| !!! | AACTTTTTTAAGGATGAGTT+AGG | - | chr8_4:48547223-48547242 | Msa1329750:intron | 25.0% |
| !! | TCACTTAATAGCTTAACTTT+TGG | - | chr8_4:48547159-48547178 | Msa1329750:intron | 25.0% |
| ! | TACAAGTTAGTCACAAATTA+GGG | + | chr8_4:48547879-48547898 | None:intergenic | 25.0% |
| ! | ATACAAGTTAGTCACAAATT+AGG | + | chr8_4:48547880-48547899 | None:intergenic | 25.0% |
| !! | TTGTATAAAGCGCTTTAATA+GGG | - | chr8_4:48547894-48547913 | Msa1329750:intron | 25.0% |
| ! | AGAAATCTAGCTATTAGATT+CGG | - | chr8_4:48547944-48547963 | Msa1329750:intron | 25.0% |
| ! | TTATAAGTTTCACTGGTATA+TGG | - | chr8_4:48548105-48548124 | Msa1329750:intron | 25.0% |
| ! | TGTGCAATGAAAAGAAAAAA+AGG | + | chr8_4:48548226-48548245 | None:intergenic | 25.0% |
| ! | TCAAGATAACAAAAATCTGA+TGG | - | chr8_4:48548262-48548281 | Msa1329750:intron | 25.0% |
| !!! | TGATCTTTTTTTTTCTTGCT+CGG | + | chr8_4:48548720-48548739 | None:intergenic | 25.0% |
| ! | AAATTCTAAACCCTAAATGT+AGG | - | chr8_4:48548757-48548776 | Msa1329750:intron | 25.0% |
| ! | AATTCTAAACCCTAAATGTA+GGG | - | chr8_4:48548758-48548777 | Msa1329750:intron | 25.0% |
| !! | ACTTGACTTTACGTTTTTAT+CGG | - | chr8_4:48549115-48549134 | Msa1329750:intron | 25.0% |
| ! | ATAAGTTATTAAAGAACGGT+TGG | - | chr8_4:48549367-48549386 | Msa1329750:intron | 25.0% |
| ! | GAAAAAGTAACATATCTTGT+GGG | + | chr8_4:48549409-48549428 | None:intergenic | 25.0% |
| ! | TGAAAAAGTAACATATCTTG+TGG | + | chr8_4:48549410-48549429 | None:intergenic | 25.0% |
| ! | AAATTGAGCTTCTATCAAAT+CGG | + | chr8_4:48549556-48549575 | None:intergenic | 25.0% |
| ! | ATAAACAATTTCTTTCAAGG+AGG | + | chr8_4:48549667-48549686 | None:intergenic | 25.0% |
| ! | TTTATCATACATAAGGTGAT+AGG | - | chr8_4:48549780-48549799 | Msa1329750:intron | 25.0% |
| ! | TTAAATAGGAACAATTTGCA+AGG | - | chr8_4:48549994-48550013 | Msa1329750:intron | 25.0% |
| ! | AAACATAATACATGCAAGTT+AGG | + | chr8_4:48550316-48550335 | None:intergenic | 25.0% |
| !!! | ATGTTTTAAGAAAAGCACAA+GGG | + | chr8_4:48550645-48550664 | None:intergenic | 25.0% |
| !!! | AATGTTTTAAGAAAAGCACA+AGG | + | chr8_4:48550646-48550665 | None:intergenic | 25.0% |
| !! | TGCTTTTCTTAAAACATTCT+TGG | - | chr8_4:48550648-48550667 | Msa1329750:intron | 25.0% |
| ! | TAATTGTCTTGATATGTTTC+AGG | - | chr8_4:48550737-48550756 | Msa1329750:intron | 25.0% |
| ! | ATTAATGTCAATAGGGTTAT+GGG | + | chr8_4:48551101-48551120 | None:intergenic | 25.0% |
| ! | CTAGACAAAATAAAACAAGA+GGG | + | chr8_4:48551163-48551182 | None:intergenic | 25.0% |
| ! | ACTAGACAAAATAAAACAAG+AGG | + | chr8_4:48551164-48551183 | None:intergenic | 25.0% |
| !!! | ACTTTTAACTTTATTTGACC+TGG | - | chr8_4:48551220-48551239 | Msa1329750:CDS | 25.0% |
| !! | AAATTGTTTGTTACCTTCAA+GGG | + | chr8_4:48551410-48551429 | None:intergenic | 25.0% |
| !! | TAAATTGTTTGTTACCTTCA+AGG | + | chr8_4:48551411-48551430 | None:intergenic | 25.0% |
| ! | ACCTGTCAAAAATTTATATC+AGG | + | chr8_4:48551583-48551602 | None:intergenic | 25.0% |
| ! | GGATATGAATGATTATGATA+TGG | - | chr8_4:48552053-48552072 | Msa1329750:intron | 25.0% |
| ! | AACCCATATTTCATAGATTT+GGG | + | chr8_4:48552138-48552157 | None:intergenic | 25.0% |
| ! | AAACCCATATTTCATAGATT+TGG | + | chr8_4:48552139-48552158 | None:intergenic | 25.0% |
| ! | TTAATACTTACAAGATAGTG+GGG | + | chr8_4:48552420-48552439 | None:intergenic | 25.0% |
| !! | CAAAAGAGTCTGAGATTTTT+AGG | + | chr8_4:48544535-48544554 | None:intergenic | 30.0% |
| TAATTGAATTATGCGAAGGA+TGG | + | chr8_4:48544712-48544731 | None:intergenic | 30.0% | |
| ATCCTTCGCATAATTCAATT+AGG | - | chr8_4:48544711-48544730 | Msa1329750:three_prime_UTR | 30.0% | |
| AACCTAATTGAATTATGCGA+AGG | + | chr8_4:48544716-48544735 | None:intergenic | 30.0% | |
| GATAAATCTTCGTTGACAAT+CGG | + | chr8_4:48544839-48544858 | None:intergenic | 30.0% | |
| CAACGAAGATTTATCTGTTA+TGG | - | chr8_4:48544844-48544863 | Msa1329750:three_prime_UTR | 30.0% | |
| ATCAAATTGAACAAAAGCTG+TGG | + | chr8_4:48545077-48545096 | None:intergenic | 30.0% | |
| !!! | TGAGACTTAAGATGCTTTTT+TGG | + | chr8_4:48545213-48545232 | None:intergenic | 30.0% |
| ! | AGAAATTCAAAGGCGTATTT+AGG | + | chr8_4:48545794-48545813 | None:intergenic | 30.0% |
| !! | CGCATTTTTCAGAAATTCAA+AGG | + | chr8_4:48545804-48545823 | None:intergenic | 30.0% |
| CAATTTGCATTTCCAGTATA+AGG | - | chr8_4:48545972-48545991 | Msa1329750:intron | 30.0% | |
| !! | TAAATTTCCCAATGGACTAA+AGG | + | chr8_4:48546252-48546271 | None:intergenic | 30.0% |
| GATCATCATAAATTTCCCAA+TGG | + | chr8_4:48546260-48546279 | None:intergenic | 30.0% | |
| ATCAAAACGCATACTACAAA+AGG | + | chr8_4:48546294-48546313 | None:intergenic | 30.0% | |
| ! | TAAGAGGCAAGTAAATTTTG+AGG | + | chr8_4:48546439-48546458 | None:intergenic | 30.0% |
| AATATGTTAATGCTTGAGAG+CGG | - | chr8_4:48546492-48546511 | Msa1329750:intron | 30.0% | |
| CTTTGACTGAAAATTTGACA+AGG | + | chr8_4:48546599-48546618 | None:intergenic | 30.0% | |
| ! | ATTTTCAGTCAAAGAAAAGC+TGG | - | chr8_4:48546605-48546624 | Msa1329750:intron | 30.0% |
| ! | TTTTCAGTCAAAGAAAAGCT+GGG | - | chr8_4:48546606-48546625 | Msa1329750:intron | 30.0% |
| TGATTAAAAAGATGCTCCAT+TGG | - | chr8_4:48546857-48546876 | Msa1329750:CDS | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+AGG | - | chr8_4:48547059-48547078 | Msa1329750:CDS | 30.0% | |
| CTAACTCATCCTTAAAAAAC+CGG | + | chr8_4:48547106-48547125 | None:intergenic | 30.0% | |
| ! | TAATAGCTTAACTTTTGGCA+TGG | - | chr8_4:48547164-48547183 | Msa1329750:intron | 30.0% |
| TGTATTTGTCCATTCTTCAA+GGG | - | chr8_4:48547366-48547385 | Msa1329750:intron | 30.0% | |
| TATCATCTTCAAATGGATGT+TGG | + | chr8_4:48547752-48547771 | None:intergenic | 30.0% | |
| TCTTGTCTATCATCTTCAAA+TGG | + | chr8_4:48547759-48547778 | None:intergenic | 30.0% | |
| ATAGACAAGAAAATTTCCCA+AGG | - | chr8_4:48547769-48547788 | Msa1329750:intron | 30.0% | |
| ! | CTTGTATAAAGCGCTTTAAT+AGG | - | chr8_4:48547893-48547912 | Msa1329750:intron | 30.0% |
| TTCTTCGTTATAAGTTTCAC+TGG | - | chr8_4:48548098-48548117 | Msa1329750:intron | 30.0% | |
| TCAGAAATCAAAATGTAGGA+AGG | + | chr8_4:48548174-48548193 | None:intergenic | 30.0% | |
| GATCTCAGAAATCAAAATGT+AGG | + | chr8_4:48548178-48548197 | None:intergenic | 30.0% | |
| !! | TTGATTTCTGAGATCACTAT+TGG | - | chr8_4:48548183-48548202 | Msa1329750:intron | 30.0% |
| ! | AGCATGTAGATATGTTTTCA+AGG | - | chr8_4:48548359-48548378 | Msa1329750:intron | 30.0% |
| !! | TAGATATGTTTTCAAGGTTG+TGG | - | chr8_4:48548365-48548384 | Msa1329750:intron | 30.0% |
| CTATAATTCAATTGGGCAAA+AGG | + | chr8_4:48548397-48548416 | None:intergenic | 30.0% | |
| TTTGCCCAATTGAATTATAG+AGG | - | chr8_4:48548397-48548416 | Msa1329750:intron | 30.0% | |
| TTGCCCAATTGAATTATAGA+GGG | - | chr8_4:48548398-48548417 | Msa1329750:intron | 30.0% | |
| !!! | AATTATAGAGGGCCTTATTT+TGG | - | chr8_4:48548409-48548428 | Msa1329750:intron | 30.0% |
| AATAGGCAAACACCAAAATA+AGG | + | chr8_4:48548424-48548443 | None:intergenic | 30.0% | |
| !! | GAATAAGCAGTTTTATACCT+GGG | + | chr8_4:48548548-48548567 | None:intergenic | 30.0% |
| !! | TGAATAAGCAGTTTTATACC+TGG | + | chr8_4:48548549-48548568 | None:intergenic | 30.0% |
| TTATTCATCGTGTTCCAAAT+AGG | - | chr8_4:48548562-48548581 | Msa1329750:intron | 30.0% | |
| TCATAAGTACATGCTATAGT+TGG | - | chr8_4:48548607-48548626 | Msa1329750:intron | 30.0% | |
| !!! | TGGTTTTAGTTCATTGTCTT+TGG | - | chr8_4:48548627-48548646 | Msa1329750:intron | 30.0% |
| ! | ACCTTTTCAAATCCAGTTTA+AGG | - | chr8_4:48548658-48548677 | Msa1329750:intron | 30.0% |
| ! | AAAGCGTTCTATTATATCCA+GGG | - | chr8_4:48548684-48548703 | Msa1329750:intron | 30.0% |
| ! | TTGTTGCCAACAAATTTGTT+GGG | + | chr8_4:48548846-48548865 | None:intergenic | 30.0% |
| TTTGTTGCCAACAAATTTGT+TGG | + | chr8_4:48548847-48548866 | None:intergenic | 30.0% | |
| ! | CAACAATTTTCTTGACTGTA+AGG | + | chr8_4:48548888-48548907 | None:intergenic | 30.0% |
| CTTACAGTCAAGAAAATTGT+TGG | - | chr8_4:48548886-48548905 | Msa1329750:intron | 30.0% | |
| ACAGAGAATATCAAGTATAG+TGG | - | chr8_4:48549289-48549308 | Msa1329750:intron | 30.0% | |
| !! | TGCTTTGTTCATCATCTTTT+GGG | - | chr8_4:48549697-48549716 | Msa1329750:intron | 30.0% |
| TATAATCTACAAACTGTGCA+TGG | - | chr8_4:48550158-48550177 | Msa1329750:intron | 30.0% | |
| GCATGTATTATGTTTCTTGT+TGG | - | chr8_4:48550321-48550340 | Msa1329750:intron | 30.0% | |
| AAAATTTACACCACATCCTT+CGG | + | chr8_4:48550421-48550440 | None:intergenic | 30.0% | |
| GATTAAAAAACCACTTATGC+TGG | + | chr8_4:48550549-48550568 | None:intergenic | 30.0% | |
| !!! | TGTTTTAAGAAAAGCACAAG+GGG | + | chr8_4:48550644-48550663 | None:intergenic | 30.0% |
| ! | CAGCTTTATAATTACAGAAC+AGG | + | chr8_4:48550863-48550882 | None:intergenic | 30.0% |
| ! | CTTTTGTTGAGTTTTCAGAT+TGG | - | chr8_4:48550935-48550954 | Msa1329750:intron | 30.0% |
| TTGACCGCTTTAGTATATAA+TGG | - | chr8_4:48551057-48551076 | Msa1329750:intron | 30.0% | |
| CATTAATGTCAATAGGGTTA+TGG | + | chr8_4:48551102-48551121 | None:intergenic | 30.0% | |
| ! | TTTAACTTTATTTGACCTGG+TGG | - | chr8_4:48551223-48551242 | Msa1329750:CDS | 30.0% |
| GAGAACAAAATCAAATGTTC+AGG | + | chr8_4:48551251-48551270 | None:intergenic | 30.0% | |
| !!! | TTATTTGTTTTGGTGTGAGT+AGG | - | chr8_4:48551274-48551293 | Msa1329750:CDS | 30.0% |
| ATAAGCTTCACTTTAAGTCT+AGG | + | chr8_4:48551347-48551366 | None:intergenic | 30.0% | |
| ACATAAATTGAATCCCTTGA+AGG | - | chr8_4:48551394-48551413 | Msa1329750:intron | 30.0% | |
| AACAATTTAGAAAGCTGTCA+TGG | - | chr8_4:48551422-48551441 | Msa1329750:intron | 30.0% | |
| AACAAAATGCTATCTCCATT+CGG | + | chr8_4:48551513-48551532 | None:intergenic | 30.0% | |
| ! | GCCTGATATAAATTTTTGAC+AGG | - | chr8_4:48551579-48551598 | Msa1329750:CDS | 30.0% |
| !! | AGTAGAGGAATTTCTAAAAC+AGG | - | chr8_4:48551618-48551637 | Msa1329750:intron | 30.0% |
| TCAACAAACATGGATCAAAT+GGG | + | chr8_4:48551753-48551772 | None:intergenic | 30.0% | |
| TTCAACAAACATGGATCAAA+TGG | + | chr8_4:48551754-48551773 | None:intergenic | 30.0% | |
| !! | TCACTTTTCTTCAACAAACA+TGG | + | chr8_4:48551763-48551782 | None:intergenic | 30.0% |
| ! | GTTTGTTGAAGAAAAGTGAA+AGG | - | chr8_4:48551764-48551783 | Msa1329750:intron | 30.0% |
| ! | TGCATTTTCTGTCGTTATAA+CGG | - | chr8_4:48551853-48551872 | Msa1329750:intron | 30.0% |
| ! | TTTTGTTGACATGAATGCAA+AGG | - | chr8_4:48552032-48552051 | Msa1329750:intron | 30.0% |
| ATGAATGATTATGATATGGC+CGG | - | chr8_4:48552057-48552076 | Msa1329750:intron | 30.0% | |
| ATCTATGAAATATGGGTTTC+AGG | - | chr8_4:48552140-48552159 | Msa1329750:intron | 30.0% | |
| ! | GTAGATAATCTGATTTTCGA+CGG | + | chr8_4:48552186-48552205 | None:intergenic | 30.0% |
| ! | TATTTTTCCTTTCACTGTTG+AGG | - | chr8_4:48552357-48552376 | Msa1329750:intron | 30.0% |
| ! | AGTGGGGAATAAATCTTTTA+TGG | + | chr8_4:48552404-48552423 | None:intergenic | 30.0% |
| AAGATAGAAATTCAAGTCCA+GGG | + | chr8_4:48552521-48552540 | None:intergenic | 30.0% | |
| TAAGATAGAAATTCAAGTCC+AGG | + | chr8_4:48552522-48552541 | None:intergenic | 30.0% | |
| TAGCTATTGTAGCATTTGTT+TGG | - | chr8_4:48552557-48552576 | Msa1329750:five_prime_UTR | 30.0% | |
| AGGATTAAGATTCCTGAGTT+AGG | - | chr8_4:48544785-48544804 | Msa1329750:three_prime_UTR | 35.0% | |
| GGATTAAGATTCCTGAGTTA+GGG | - | chr8_4:48544786-48544805 | Msa1329750:three_prime_UTR | 35.0% | |
| CGAAGATTTATCTGTTATGG+AGG | - | chr8_4:48544847-48544866 | Msa1329750:three_prime_UTR | 35.0% | |
| AGATTTATCTGTTATGGAGG+AGG | - | chr8_4:48544850-48544869 | Msa1329750:three_prime_UTR | 35.0% | |
| ! | TTTTTACTGCTTGATTCTCG+TGG | - | chr8_4:48545140-48545159 | Msa1329750:CDS | 35.0% |
| !! | TCTGTAAGTTTGCTTTTCAG+TGG | - | chr8_4:48545436-48545455 | Msa1329750:CDS | 35.0% |
| !! | CTGTAAGTTTGCTTTTCAGT+GGG | - | chr8_4:48545437-48545456 | Msa1329750:CDS | 35.0% |
| GCATCATATTTCCTATCAGT+TGG | + | chr8_4:48545566-48545585 | None:intergenic | 35.0% | |
| ATATGATGCAGCTGATATCA+TGG | - | chr8_4:48545577-48545596 | Msa1329750:intron | 35.0% | |
| !!! | CTTGATGTGTCTTTTTTCAC+AGG | - | chr8_4:48545706-48545725 | Msa1329750:intron | 35.0% |
| !! | TGATTTTTGTTTGGAGTTGC+TGG | - | chr8_4:48545751-48545770 | Msa1329750:CDS | 35.0% |
| ! | AATTCAAAGGCGTATTTAGG+AGG | + | chr8_4:48545791-48545810 | None:intergenic | 35.0% |
| ! | GAATTTCTGAAAAATGCGGA+TGG | - | chr8_4:48545806-48545825 | Msa1329750:CDS | 35.0% |
| TGGAGTTGACATGAAGAATA+AGG | - | chr8_4:48545826-48545845 | Msa1329750:intron | 35.0% | |
| ! | TCTGAAACACATAGCTGATT+TGG | - | chr8_4:48545871-48545890 | Msa1329750:intron | 35.0% |
| ACTATAGGTGATAATCGCAA+GGG | + | chr8_4:48545908-48545927 | None:intergenic | 35.0% | |
| AACTATAGGTGATAATCGCA+AGG | + | chr8_4:48545909-48545928 | None:intergenic | 35.0% | |
| GAAATGCAAATTGAACTCAC+AGG | + | chr8_4:48545965-48545984 | None:intergenic | 35.0% | |
| CAAATGCTAGAGTTCAAGAT+TGG | + | chr8_4:48546094-48546113 | None:intergenic | 35.0% | |
| TTCAAATTCTTCAGTGTGCA+TGG | - | chr8_4:48546133-48546152 | Msa1329750:CDS | 35.0% | |
| TTTACTTCTGCAGCATAAAC+TGG | - | chr8_4:48546190-48546209 | Msa1329750:intron | 35.0% | |
| AATCTTCTCCTTTAGTCCAT+TGG | - | chr8_4:48546241-48546260 | Msa1329750:intron | 35.0% | |
| ATCTTCTCCTTTAGTCCATT+GGG | - | chr8_4:48546242-48546261 | Msa1329750:intron | 35.0% | |
| ACATACATGACAATCTCCTA+CGG | + | chr8_4:48546468-48546487 | None:intergenic | 35.0% | |
| GGTGAAATTGGAGAAATTGT+TGG | - | chr8_4:48546513-48546532 | Msa1329750:intron | 35.0% | |
| GAAATTGGAGAAATTGTTGG+TGG | - | chr8_4:48546516-48546535 | Msa1329750:intron | 35.0% | |
| !! | TGTGGATAAGTTGATAGAGT+TGG | - | chr8_4:48546557-48546576 | Msa1329750:intron | 35.0% |
| ATTCTATTTGTCCTGGTTGT+AGG | - | chr8_4:48546648-48546667 | Msa1329750:CDS | 35.0% | |
| AAAAAGATGCTCCATTGGAT+TGG | - | chr8_4:48546862-48546881 | Msa1329750:CDS | 35.0% | |
| !!! | CTTCATTTTGTTGGCTTTGA+GGG | - | chr8_4:48547002-48547021 | Msa1329750:intron | 35.0% |
| !!! | TTCATTTTGTTGGCTTTGAG+GGG | - | chr8_4:48547003-48547022 | Msa1329750:intron | 35.0% |
| GAGAAGAGTTTATAAAGAGG+AGG | - | chr8_4:48547062-48547081 | Msa1329750:CDS | 35.0% | |
| !!! | CGGTTTTTTAAGGATGAGTT+AGG | - | chr8_4:48547104-48547123 | Msa1329750:CDS | 35.0% |
| GTGTATTTGTCCATTCTTCA+AGG | - | chr8_4:48547365-48547384 | Msa1329750:intron | 35.0% | |
| TATATCTCTAACTAAACCCC+TGG | + | chr8_4:48547400-48547419 | None:intergenic | 35.0% | |
| ATATATATGAAGCCAAGCAC+AGG | + | chr8_4:48547578-48547597 | None:intergenic | 35.0% | |
| ACTTCACAACACACAGAATA+CGG | + | chr8_4:48547628-48547647 | None:intergenic | 35.0% | |
| TTTATGAAACAATGCACCAG+AGG | + | chr8_4:48547670-48547689 | None:intergenic | 35.0% | |
| ! | GTTTGAGGTTACTACTAAAG+CGG | - | chr8_4:48547706-48547725 | Msa1329750:intron | 35.0% |
| AATGGATGTTGGAAGTTTAC+AGG | + | chr8_4:48547741-48547760 | None:intergenic | 35.0% | |
| TTTCCCAAGGATGAAATTGT+TGG | - | chr8_4:48547782-48547801 | Msa1329750:intron | 35.0% | |
| TTCCCAAGGATGAAATTGTT+GGG | - | chr8_4:48547783-48547802 | Msa1329750:intron | 35.0% | |
| AACCCAACAATTTCATCCTT+GGG | + | chr8_4:48547788-48547807 | None:intergenic | 35.0% | |
| TGTGGAAATTCAACCAAAGA+AGG | - | chr8_4:48547807-48547826 | Msa1329750:intron | 35.0% | |
| ATTGTTGATGTCCCTTTCTT+TGG | + | chr8_4:48547856-48547875 | None:intergenic | 35.0% | |
| TTTCACTGGTATATGGTTGT+AGG | - | chr8_4:48548112-48548131 | Msa1329750:intron | 35.0% | |
| CTTGGTTGAAATACAAGTCT+TGG | - | chr8_4:48548293-48548312 | Msa1329750:intron | 35.0% | |
| !! | AACCATACAGTTTGCTGTAT+TGG | - | chr8_4:48548319-48548338 | Msa1329750:intron | 35.0% |
| TACCAATACAGCAAACTGTA+TGG | + | chr8_4:48548324-48548343 | None:intergenic | 35.0% | |
| AGGCCCTCTATAATTCAATT+GGG | + | chr8_4:48548404-48548423 | None:intergenic | 35.0% | |
| AAGGCCCTCTATAATTCAAT+TGG | + | chr8_4:48548405-48548424 | None:intergenic | 35.0% | |
| !!! | TTTTGGTGTTTGCCTATTTC+AGG | - | chr8_4:48548426-48548445 | Msa1329750:intron | 35.0% |
| TGGATTTGAAAAGGTCAGAA+TGG | + | chr8_4:48548653-48548672 | None:intergenic | 35.0% | |
| GCCTTAAACTGGATTTGAAA+AGG | + | chr8_4:48548662-48548681 | None:intergenic | 35.0% | |
| ! | CAAAGCGTTCTATTATATCC+AGG | - | chr8_4:48548683-48548702 | Msa1329750:intron | 35.0% |
| !! | ACAAATTTGTTGGGCACATA+AGG | + | chr8_4:48548837-48548856 | None:intergenic | 35.0% |
| TATGTGCCCAACAAATTTGT+TGG | - | chr8_4:48548837-48548856 | Msa1329750:intron | 35.0% | |
| !!! | TCTTTTACAAAAGGAGCACT+TGG | - | chr8_4:48549526-48549545 | Msa1329750:intron | 35.0% |
| TCGAGTAGTATGATCCTAAA+AGG | - | chr8_4:48549638-48549657 | Msa1329750:intron | 35.0% | |
| CGAGTAGTATGATCCTAAAA+GGG | - | chr8_4:48549639-48549658 | Msa1329750:intron | 35.0% | |
| !! | GTGCTTTGTTCATCATCTTT+TGG | - | chr8_4:48549696-48549715 | Msa1329750:intron | 35.0% |
| !! | GCTTTGTTCATCATCTTTTG+GGG | - | chr8_4:48549698-48549717 | Msa1329750:intron | 35.0% |
| CACACAATGATCAGCTATAT+TGG | + | chr8_4:48549909-48549928 | None:intergenic | 35.0% | |
| GTACCACAGAGTTGTTAAAT+AGG | - | chr8_4:48549980-48549999 | Msa1329750:intron | 35.0% | |
| GTTCCTATTTAACAACTCTG+TGG | + | chr8_4:48549986-48550005 | None:intergenic | 35.0% | |
| GCAAAAAAGTCAGCACAATT+AGG | + | chr8_4:48550047-48550066 | None:intergenic | 35.0% | |
| ATACAAGTCAAAATTTGCCC+AGG | - | chr8_4:48550265-48550284 | Msa1329750:intron | 35.0% | |
| !! | AAGCCAAATAAAGAGTACCT+GGG | + | chr8_4:48550285-48550304 | None:intergenic | 35.0% |
| ! | ATGTGGTGTAAATTTTGCCA+TGG | - | chr8_4:48550425-48550444 | Msa1329750:CDS | 35.0% |
| ATGAATCAAACATCTCTGTG+AGG | + | chr8_4:48550452-48550471 | None:intergenic | 35.0% | |
| GTGTTAATCCTCCTATTACT+AGG | - | chr8_4:48550472-48550491 | Msa1329750:intron | 35.0% | |
| AAATGCATTAAGCAAGGACA+AGG | + | chr8_4:48550512-48550531 | None:intergenic | 35.0% | |
| GCTAGTAAATGCATTAAGCA+AGG | + | chr8_4:48550518-48550537 | None:intergenic | 35.0% | |
| !! | TTTTAAGAAAAGCACAAGGG+GGG | + | chr8_4:48550642-48550661 | None:intergenic | 35.0% |
| !!! | GTTTTAAGAAAAGCACAAGG+GGG | + | chr8_4:48550643-48550662 | None:intergenic | 35.0% |
| GAAGTTTCTTTCATCTGAGT+TGG | - | chr8_4:48550801-48550820 | Msa1329750:intron | 35.0% | |
| TGGTTGCTAACATCATACAA+AGG | - | chr8_4:48550821-48550840 | Msa1329750:intron | 35.0% | |
| GCTAACATCATACAAAGGTT+TGG | - | chr8_4:48550826-48550845 | Msa1329750:intron | 35.0% | |
| ! | GAGTTTTCAGATTGGTAGAT+TGG | - | chr8_4:48550943-48550962 | Msa1329750:intron | 35.0% |
| !! | AAAAAACTTGGTGTGCTTGT+GGG | + | chr8_4:48551007-48551026 | None:intergenic | 35.0% |
| !! | TAAAAAACTTGGTGTGCTTG+TGG | + | chr8_4:48551008-48551027 | None:intergenic | 35.0% |
| GGCAAGCAGAATAAAAAACT+TGG | + | chr8_4:48551019-48551038 | None:intergenic | 35.0% | |
| !!! | AGTTTTTTATTCTGCTTGCC+AGG | - | chr8_4:48551019-48551038 | Msa1329750:intron | 35.0% |
| ACCGCTTTAGTATATAATGG+TGG | - | chr8_4:48551060-48551079 | Msa1329750:intron | 35.0% | |
| CCCACCATTATATACTAAAG+CGG | + | chr8_4:48551064-48551083 | None:intergenic | 35.0% | |
| CCGCTTTAGTATATAATGGT+GGG | - | chr8_4:48551061-48551080 | Msa1329750:intron | 35.0% | |
| ! | TAGTATATAATGGTGGGAGA+AGG | - | chr8_4:48551067-48551086 | Msa1329750:intron | 35.0% |
| ! | AGTATATAATGGTGGGAGAA+GGG | - | chr8_4:48551068-48551087 | Msa1329750:intron | 35.0% |
| ! | AAATAAAACAAGAGGGTGCA+GGG | + | chr8_4:48551156-48551175 | None:intergenic | 35.0% |
| ! | AAAATAAAACAAGAGGGTGC+AGG | + | chr8_4:48551157-48551176 | None:intergenic | 35.0% |
| TAAACAGAATGTTCGACTGT+AGG | - | chr8_4:48551454-48551473 | Msa1329750:intron | 35.0% | |
| AATGTTCGACTGTAGGATTA+TGG | - | chr8_4:48551461-48551480 | Msa1329750:intron | 35.0% | |
| !! | GGAATTTCTAAAACAGGCAA+AGG | - | chr8_4:48551624-48551643 | Msa1329750:intron | 35.0% |
| ATATGATACATATGCCAACG+AGG | - | chr8_4:48551972-48551991 | Msa1329750:intron | 35.0% | |
| TGAATGATTATGATATGGCC+GGG | - | chr8_4:48552058-48552077 | Msa1329750:intron | 35.0% | |
| ! | ATGGACATTTTGTTCAAGTC+AGG | + | chr8_4:48552111-48552130 | None:intergenic | 35.0% |
| ACGCCCAAATCTATGAAATA+TGG | - | chr8_4:48552132-48552151 | Msa1329750:intron | 35.0% | |
| CGCCCAAATCTATGAAATAT+GGG | - | chr8_4:48552133-48552152 | Msa1329750:intron | 35.0% | |
| TAGAAAATGAGCACTCCTAT+TGG | - | chr8_4:48552298-48552317 | Msa1329750:exon | 35.0% | |
| AGAAAATGAGCACTCCTATT+GGG | - | chr8_4:48552299-48552318 | Msa1329750:exon | 35.0% | |
| TGCTTAGATGCAACTGATAT+TGG | - | chr8_4:48552602-48552621 | Msa1329750:five_prime_UTR | 35.0% | |
| CTATCTCATAAACGAGCGTT+AGG | + | chr8_4:48544563-48544582 | None:intergenic | 40.0% | |
| CGAGCTCGTAAGTAAACTTA+GGG | - | chr8_4:48544617-48544636 | Msa1329750:three_prime_UTR | 40.0% | |
| GAGCTCGTAAGTAAACTTAG+GGG | - | chr8_4:48544618-48544637 | Msa1329750:three_prime_UTR | 40.0% | |
| AGCTCGTAAGTAAACTTAGG+GGG | - | chr8_4:48544619-48544638 | Msa1329750:three_prime_UTR | 40.0% | |
| ! | TCCTGACTCTCACCAATTTT+AGG | - | chr8_4:48544662-48544681 | Msa1329750:three_prime_UTR | 40.0% |
| ! | CCTGACTCTCACCAATTTTA+GGG | - | chr8_4:48544663-48544682 | Msa1329750:three_prime_UTR | 40.0% |
| TATGCGAAGGATGGTAGAAT+TGG | + | chr8_4:48544703-48544722 | None:intergenic | 40.0% | |
| ATTCCTGAGTTAGGGTTCTA+AGG | - | chr8_4:48544794-48544813 | Msa1329750:three_prime_UTR | 40.0% | |
| ! | TTCCTGAGTTAGGGTTCTAA+GGG | - | chr8_4:48544795-48544814 | Msa1329750:three_prime_UTR | 40.0% |
| !! | TTAGGGTTCTAAGGGAGTAT+GGG | - | chr8_4:48544803-48544822 | Msa1329750:three_prime_UTR | 40.0% |
| AATCACAAGTGTCAGTGTTG+TGG | + | chr8_4:48544967-48544986 | None:intergenic | 40.0% | |
| GTGTCTAATTGTCGTGTCTA+TGG | - | chr8_4:48545029-48545048 | Msa1329750:CDS | 40.0% | |
| TCAGCACTGTGAATTTCCAT+AGG | + | chr8_4:48545313-48545332 | None:intergenic | 40.0% | |
| AAGAAAGAAGCGATTCATGC+TGG | + | chr8_4:48545417-48545436 | None:intergenic | 40.0% | |
| TGAAGAATAAGGTTCTGCCT+CGG | - | chr8_4:48545837-48545856 | Msa1329750:intron | 40.0% | |
| TATGCCAAAACGTTTCGCTA+AGG | - | chr8_4:48545937-48545956 | Msa1329750:intron | 40.0% | |
| CATACATGACAATCTCCTAC+GGG | + | chr8_4:48546467-48546486 | None:intergenic | 40.0% | |
| ATCAACTTATCCACAAGTGC+AGG | + | chr8_4:48546552-48546571 | None:intergenic | 40.0% | |
| GTTGTAGGTGGAAATTGGAT+GGG | - | chr8_4:48546663-48546682 | Msa1329750:CDS | 40.0% | |
| TGCCAAGTGCATATTTGCAA+TGG | - | chr8_4:48546705-48546724 | Msa1329750:CDS | 40.0% | |
| CTCCATTGCAAATATGCACT+TGG | + | chr8_4:48546710-48546729 | None:intergenic | 40.0% | |
| GAACTCTATCACCAATCCAA+TGG | + | chr8_4:48546876-48546895 | None:intergenic | 40.0% | |
| TGGAAATTCCGCCTTTATTG+CGG | - | chr8_4:48546920-48546939 | Msa1329750:intron | 40.0% | |
| CAAACCAAAGGCCACAATTT+AGG | + | chr8_4:48546960-48546979 | None:intergenic | 40.0% | |
| !! | CAACAAAATGAAGGTGTTGG+AGG | + | chr8_4:48546995-48547014 | None:intergenic | 40.0% |
| ! | CTCCAACACCTTCATTTTGT+TGG | - | chr8_4:48546993-48547012 | Msa1329750:intron | 40.0% |
| ! | AGCCAACAAAATGAAGGTGT+TGG | + | chr8_4:48546998-48547017 | None:intergenic | 40.0% |
| CCTCAAAGCCAACAAAATGA+AGG | + | chr8_4:48547004-48547023 | None:intergenic | 40.0% | |
| !!! | CCTTCATTTTGTTGGCTTTG+AGG | - | chr8_4:48547001-48547020 | Msa1329750:intron | 40.0% |
| !!! | TCATTTTGTTGGCTTTGAGG+GGG | - | chr8_4:48547004-48547023 | Msa1329750:intron | 40.0% |
| !! | CCTTAAAAAACCGGCTTGTA+AGG | + | chr8_4:48547097-48547116 | None:intergenic | 40.0% |
| !!! | CCTTACAAGCCGGTTTTTTA+AGG | - | chr8_4:48547094-48547113 | Msa1329750:CDS | 40.0% |
| !! | GGCATAGTTTGTTCACGAAA+TGG | - | chr8_4:48547299-48547318 | Msa1329750:intron | 40.0% |
| GAACAACATCCCTTGAAGAA+TGG | + | chr8_4:48547378-48547397 | None:intergenic | 40.0% | |
| ! | GAAAAGTATATGCCTGTGCT+TGG | - | chr8_4:48547563-48547582 | Msa1329750:intron | 40.0% |
| CAACCCAACAATTTCATCCT+TGG | + | chr8_4:48547789-48547808 | None:intergenic | 40.0% | |
| ! | AGGATGAAATTGTTGGGTTG+TGG | - | chr8_4:48547789-48547808 | Msa1329750:intron | 40.0% |
| ACTCTCAAGTTCACCTTCTT+TGG | + | chr8_4:48547823-48547842 | None:intergenic | 40.0% | |
| AAAGAAGGTGAACTTGAGAG+TGG | - | chr8_4:48547822-48547841 | Msa1329750:intron | 40.0% | |
| AAGAAGGTGAACTTGAGAGT+GGG | - | chr8_4:48547823-48547842 | Msa1329750:intron | 40.0% | |
| TGGGAAACTGACCAAAGAAA+GGG | - | chr8_4:48547842-48547861 | Msa1329750:intron | 40.0% | |
| GTAGCACAGAGAATGATCAT+TGG | - | chr8_4:48548138-48548157 | Msa1329750:intron | 40.0% | |
| ! | AAAAGGTGTGATCCAGTAAC+AGG | + | chr8_4:48548209-48548228 | None:intergenic | 40.0% |
| AATCTGATGGAACGATAGCT+TGG | - | chr8_4:48548275-48548294 | Msa1329750:intron | 40.0% | |
| !! | TAGGCTTGTTAGCCTGAAAT+AGG | + | chr8_4:48548441-48548460 | None:intergenic | 40.0% |
| AAACTTCATCAGTTAAGCCC+AGG | - | chr8_4:48548528-48548547 | Msa1329750:intron | 40.0% | |
| GCACACACTCAATTCCTATT+TGG | + | chr8_4:48548579-48548598 | None:intergenic | 40.0% | |
| CTGGCATTTGTATGTTGATG+TGG | - | chr8_4:48548786-48548805 | Msa1329750:intron | 40.0% | |
| !! | TTTATCGGCTCTTCTCTCAA+TGG | - | chr8_4:48549130-48549149 | Msa1329750:intron | 40.0% |
| ! | ATTTAGAACACTGCGACTTG+TGG | - | chr8_4:48549184-48549203 | Msa1329750:intron | 40.0% |
| !!! | AGAACGGTTGGTTTTTGAAG+TGG | - | chr8_4:48549379-48549398 | Msa1329750:intron | 40.0% |
| AAAAGCTCGAGCTAACACTA+TGG | + | chr8_4:48549589-48549608 | None:intergenic | 40.0% | |
| TCATACTACTCGAGCATACA+GGG | + | chr8_4:48549631-48549650 | None:intergenic | 40.0% | |
| ATCATACTACTCGAGCATAC+AGG | + | chr8_4:48549632-48549651 | None:intergenic | 40.0% | |
| ! | TTTCAAGGAGGTTCCCTTTT+AGG | + | chr8_4:48549655-48549674 | None:intergenic | 40.0% |
| CTCTGTGGTACACTGAAAAA+TGG | + | chr8_4:48549971-48549990 | None:intergenic | 40.0% | |
| GAACAATTTGCAAGGCAATC+AGG | - | chr8_4:48550002-48550021 | Msa1329750:intron | 40.0% | |
| TCTTGAATGCTGTCAAAGCA+AGG | - | chr8_4:48550068-48550087 | Msa1329750:intron | 40.0% | |
| CTTGAATGCTGTCAAAGCAA+GGG | - | chr8_4:48550069-48550088 | Msa1329750:intron | 40.0% | |
| TTGCCCAGGTACTCTTTATT+TGG | - | chr8_4:48550279-48550298 | Msa1329750:intron | 40.0% | |
| !! | GAAGCCAAATAAAGAGTACC+TGG | + | chr8_4:48550286-48550305 | None:intergenic | 40.0% |
| TACATGCAAGTTAGGAACAG+TGG | + | chr8_4:48550308-48550327 | None:intergenic | 40.0% | |
| AAGCGGCATTACCTAGTAAT+AGG | + | chr8_4:48550486-48550505 | None:intergenic | 40.0% | |
| CACATCATTCATACAACAGG+AGG | + | chr8_4:48550571-48550590 | None:intergenic | 40.0% | |
| CTCCTGTTGTATGAATGATG+TGG | - | chr8_4:48550569-48550588 | Msa1329750:CDS | 40.0% | |
| AGCCACATCATTCATACAAC+AGG | + | chr8_4:48550574-48550593 | None:intergenic | 40.0% | |
| ! | TTTAAGAAAAGCACAAGGGG+GGG | + | chr8_4:48550641-48550660 | None:intergenic | 40.0% |
| ! | GTATATAATGGTGGGAGAAG+GGG | - | chr8_4:48551069-48551088 | Msa1329750:intron | 40.0% |
| AATGTCAATAGGGTTATGGG+AGG | + | chr8_4:48551098-48551117 | None:intergenic | 40.0% | |
| CTTTCGCATGAGATCATTGA+TGG | - | chr8_4:48551316-48551335 | Msa1329750:CDS | 40.0% | |
| GAAGCTTATCAAAATGCCCA+TGG | - | chr8_4:48551358-48551377 | Msa1329750:CDS | 40.0% | |
| ! | TGTTTCCAGATTAGCTCCAT+GGG | + | chr8_4:48551377-48551396 | None:intergenic | 40.0% |
| ! | ATGTTTCCAGATTAGCTCCA+TGG | + | chr8_4:48551378-48551397 | None:intergenic | 40.0% |
| CTTACAACGTGAAGCTTGTA+TGG | - | chr8_4:48551542-48551561 | Msa1329750:CDS | 40.0% | |
| AGAAATTCCTCTACTACGCT+AGG | + | chr8_4:48551613-48551632 | None:intergenic | 40.0% | |
| !!! | CATTTTCGATGATTTGCTCG+AGG | - | chr8_4:48551678-48551697 | Msa1329750:intron | 40.0% |
| !! | TGAAAGGTGTGTAGCTTTTC+TGG | - | chr8_4:48551780-48551799 | Msa1329750:intron | 40.0% |
| !! | GAAAGGTGTGTAGCTTTTCT+GGG | - | chr8_4:48551781-48551800 | Msa1329750:intron | 40.0% |
| ! | AAAATGTGGCCTTAAGTAGC+TGG | + | chr8_4:48551926-48551945 | None:intergenic | 40.0% |
| !!! | TAGTTTTGACTCTTGACCAG+CGG | + | chr8_4:48551951-48551970 | None:intergenic | 40.0% |
| TTTCATAGATTTGGGCGTGA+TGG | + | chr8_4:48552130-48552149 | None:intergenic | 40.0% | |
| GCAGCTACTTATCAACACAA+TGG | - | chr8_4:48552270-48552289 | Msa1329750:CDS | 40.0% | |
| GAAAATGAGCACTCCTATTG+GGG | - | chr8_4:48552300-48552319 | Msa1329750:exon | 40.0% | |
| AAAACTACAACTGCCCCAAT+AGG | + | chr8_4:48552316-48552335 | None:intergenic | 40.0% | |
| TCAGTTACCTCAACAGTGAA+AGG | + | chr8_4:48552367-48552386 | None:intergenic | 40.0% | |
| ACTGTTGAGGTAACTGAACA+TGG | - | chr8_4:48552370-48552389 | Msa1329750:intron | 40.0% | |
| ! | TAGCATTTGTTTGGAGCTAG+AGG | - | chr8_4:48552566-48552585 | Msa1329750:five_prime_UTR | 40.0% |
| ! | AGCATTTGTTTGGAGCTAGA+GGG | - | chr8_4:48552567-48552586 | Msa1329750:five_prime_UTR | 40.0% |
| TCTCATAAACGAGCGTTAGG+AGG | + | chr8_4:48544560-48544579 | None:intergenic | 45.0% | |
| CTCGTTTATGAGATAGCGAG+TGG | - | chr8_4:48544567-48544586 | Msa1329750:three_prime_UTR | 45.0% | |
| GCGAGCTCGTAAGTAAACTT+AGG | - | chr8_4:48544616-48544635 | Msa1329750:three_prime_UTR | 45.0% | |
| GCTCGTAAGTAAACTTAGGG+GGG | - | chr8_4:48544620-48544639 | Msa1329750:three_prime_UTR | 45.0% | |
| CCCTAAAATTGGTGAGAGTC+AGG | + | chr8_4:48544666-48544685 | None:intergenic | 45.0% | |
| !! | GTTAGGGTTCTAAGGGAGTA+TGG | - | chr8_4:48544802-48544821 | Msa1329750:three_prime_UTR | 45.0% |
| AGATACCCTTCTTGCAGTCT+CGG | - | chr8_4:48544913-48544932 | Msa1329750:CDS | 45.0% | |
| ATGTCATGTCCGATTGTCGA+TGG | + | chr8_4:48544943-48544962 | None:intergenic | 45.0% | |
| TTGATTCTCGTGGTTCAGGA+TGG | - | chr8_4:48545150-48545169 | Msa1329750:CDS | 45.0% | |
| ! | TCACGACGCTGCTAAACTTT+TGG | - | chr8_4:48545230-48545249 | Msa1329750:intron | 45.0% |
| ! | GACGCTGCTAAACTTTTGGT+GGG | - | chr8_4:48545234-48545253 | Msa1329750:intron | 45.0% |
| ATGCTGGATAGGGTCAATGT+AGG | + | chr8_4:48545401-48545420 | None:intergenic | 45.0% | |
| GAAGCGATTCATGCTGGATA+GGG | + | chr8_4:48545411-48545430 | None:intergenic | 45.0% | |
| AGAAGCGATTCATGCTGGAT+AGG | + | chr8_4:48545412-48545431 | None:intergenic | 45.0% | |
| AGCTTTCGAGATTGAGCTTG+TGG | - | chr8_4:48545531-48545550 | Msa1329750:intron | 45.0% | |
| GCTTTCGAGATTGAGCTTGT+GGG | - | chr8_4:48545532-48545551 | Msa1329750:intron | 45.0% | |
| GGGATTATGCTCCAACTGAT+AGG | - | chr8_4:48545552-48545571 | Msa1329750:intron | 45.0% | |
| ! | TTTTTCACAGGCTGCTTCGA+AGG | - | chr8_4:48545718-48545737 | Msa1329750:CDS | 45.0% |
| ! | TTTTCACAGGCTGCTTCGAA+GGG | - | chr8_4:48545719-48545738 | Msa1329750:CDS | 45.0% |
| GAAGAATAAGGTTCTGCCTC+GGG | - | chr8_4:48545838-48545857 | Msa1329750:intron | 45.0% | |
| TGATAATCGCAAGGGAGCAA+GGG | + | chr8_4:48545900-48545919 | None:intergenic | 45.0% | |
| GGCATACTGTGGACAACTAT+AGG | + | chr8_4:48545923-48545942 | None:intergenic | 45.0% | |
| !! | CGAAACGTTTTGGCATACTG+TGG | + | chr8_4:48545934-48545953 | None:intergenic | 45.0% |
| AGTTGCATCAGCCCTTATAC+TGG | + | chr8_4:48545987-48546006 | None:intergenic | 45.0% | |
| ATGCTTGAGAGCGGTGAAAT+TGG | - | chr8_4:48546501-48546520 | Msa1329750:intron | 45.0% | |
| TACAATGCTACCTGCACTTG+TGG | - | chr8_4:48546539-48546558 | Msa1329750:intron | 45.0% | |
| CTATTTGTCCTGGTTGTAGG+TGG | - | chr8_4:48546651-48546670 | Msa1329750:CDS | 45.0% | |
| TCCTGGTTGTAGGTGGAAAT+TGG | - | chr8_4:48546658-48546677 | Msa1329750:CDS | 45.0% | |
| TCCAATTTCCACCTACAACC+AGG | + | chr8_4:48546662-48546681 | None:intergenic | 45.0% | |
| GGTTGTAGGTGGAAATTGGA+TGG | - | chr8_4:48546662-48546681 | Msa1329750:CDS | 45.0% | |
| TAGGTGGAAATTGGATGGGA+TGG | - | chr8_4:48546667-48546686 | Msa1329750:CDS | 45.0% | |
| !! | ACACTTCATCGACTCATCGT+AGG | + | chr8_4:48546829-48546848 | None:intergenic | 45.0% |
| CTGCAATGAAGGCAAACCAA+AGG | + | chr8_4:48546972-48546991 | None:intergenic | 45.0% | |
| TAGTCCCACATCGGATAGAT+AGG | - | chr8_4:48547033-48547052 | Msa1329750:CDS | 45.0% | |
| GAGTCCTATCTATCCGATGT+GGG | + | chr8_4:48547040-48547059 | None:intergenic | 45.0% | |
| AGAGTCCTATCTATCCGATG+TGG | + | chr8_4:48547041-48547060 | None:intergenic | 45.0% | |
| !! | AAAAACCGGCTTGTAAGGTG+AGG | + | chr8_4:48547092-48547111 | None:intergenic | 45.0% |
| !! | GGCATGGTTTGTTCACGAAA+TGG | - | chr8_4:48547180-48547199 | Msa1329750:intron | 45.0% |
| TCTTCAAGGGATGTTGTTCC+AGG | - | chr8_4:48547379-48547398 | Msa1329750:intron | 45.0% | |
| CTTCAAGGGATGTTGTTCCA+GGG | - | chr8_4:48547380-48547399 | Msa1329750:intron | 45.0% | |
| TTCAAGGGATGTTGTTCCAG+GGG | - | chr8_4:48547381-48547400 | Msa1329750:intron | 45.0% | |
| ! | CATCTGATCTGAGATTTGCG+TGG | - | chr8_4:48547493-48547512 | Msa1329750:intron | 45.0% |
| ! | TGATCTGAGATTTGCGTGGA+CGG | - | chr8_4:48547497-48547516 | Msa1329750:intron | 45.0% |
| TTTGATGTGTGTTCCTCCTC+TGG | - | chr8_4:48547651-48547670 | Msa1329750:intron | 45.0% | |
| ATGAAACAATGCACCAGAGG+AGG | + | chr8_4:48547667-48547686 | None:intergenic | 45.0% | |
| GTGGGAAACTGACCAAAGAA+AGG | - | chr8_4:48547841-48547860 | Msa1329750:intron | 45.0% | |
| AAGCAGATGCCATTCCCTAT+TGG | - | chr8_4:48547986-48548005 | Msa1329750:intron | 45.0% | |
| ATCTACTGCAGCAGCCAATA+GGG | + | chr8_4:48548003-48548022 | None:intergenic | 45.0% | |
| !! | GTAGATGGATTGTGAAGCTG+TGG | - | chr8_4:48548017-48548036 | Msa1329750:intron | 45.0% |
| ! | GATCACTATTGGCCTGTTAC+TGG | - | chr8_4:48548194-48548213 | Msa1329750:intron | 45.0% |
| AGGCCATGGTTCATGTTGAA+CGG | - | chr8_4:48548490-48548509 | Msa1329750:intron | 45.0% | |
| AAGCCGTTCAACATGAACCA+TGG | + | chr8_4:48548496-48548515 | None:intergenic | 45.0% | |
| ! | TGTTGAACGGCTTTGTGAAG+TGG | - | chr8_4:48548503-48548522 | Msa1329750:intron | 45.0% |
| GAACGCTTTGTGCCTTAAAC+TGG | + | chr8_4:48548673-48548692 | None:intergenic | 45.0% | |
| TGCTCGGAAAATTAACTCCC+TGG | + | chr8_4:48548704-48548723 | None:intergenic | 45.0% | |
| CCAGCATGACCCTACATTTA+GGG | + | chr8_4:48548770-48548789 | None:intergenic | 45.0% | |
| !!! | CGGTTGGTTTTTGAAGTGGA+TGG | - | chr8_4:48549383-48549402 | Msa1329750:intron | 45.0% |
| ! | TGCTGCTCAAGTCTAAAGCA+AGG | + | chr8_4:48549433-48549452 | None:intergenic | 45.0% |
| TTGGGAATACCTCAGCCAAT+CGG | + | chr8_4:48550095-48550114 | None:intergenic | 45.0% | |
| GATGTTCTATGCATGCGCAT+TGG | - | chr8_4:48550392-48550411 | Msa1329750:CDS | 45.0% | |
| AAACATCTCTGTGAGGACCA+TGG | + | chr8_4:48550445-48550464 | None:intergenic | 45.0% | |
| CGGCATTACCTAGTAATAGG+AGG | + | chr8_4:48550483-48550502 | None:intergenic | 45.0% | |
| AAGCAAGGACAAGGTGAAAG+CGG | + | chr8_4:48550503-48550522 | None:intergenic | 45.0% | |
| GCATGATAGACCAGCATAAG+TGG | - | chr8_4:48550536-48550555 | Msa1329750:intron | 45.0% | |
| CTAAAGCGGTCAAAAGTCGA+TGG | + | chr8_4:48551050-48551069 | None:intergenic | 45.0% | |
| TCAAATGTTCAGGATCCACC+AGG | + | chr8_4:48551241-48551260 | None:intergenic | 45.0% | |
| TCGCATGAGATCATTGATGG+AGG | - | chr8_4:48551319-48551338 | Msa1329750:CDS | 45.0% | |
| AAATGCCCATGGAGCTAATC+TGG | - | chr8_4:48551369-48551388 | Msa1329750:CDS | 45.0% | |
| ATCTCCATTCGGCAAGATCA+CGG | + | chr8_4:48551502-48551521 | None:intergenic | 45.0% | |
| ATGTTTGCCTAGCGTAGTAG+AGG | - | chr8_4:48551603-48551622 | Msa1329750:intron | 45.0% | |
| TAAAACAGGCAAAGGCTGCT+CGG | - | chr8_4:48551632-48551651 | Msa1329750:intron | 45.0% | |
| !! | TTTCGATGATTTGCTCGAGG+CGG | - | chr8_4:48551681-48551700 | Msa1329750:intron | 45.0% |
| ATCTTTCCAAGGCTTTCGGT+GGG | - | chr8_4:48551704-48551723 | Msa1329750:CDS | 45.0% | |
| ATTTATCCCACCGAAAGCCT+TGG | + | chr8_4:48551713-48551732 | None:intergenic | 45.0% | |
| TGACCATCTCCAGCTACTTA+AGG | - | chr8_4:48551914-48551933 | Msa1329750:CDS | 45.0% | |
| ATATGGGTTTCAGGCACAGA+TGG | - | chr8_4:48552149-48552168 | Msa1329750:intron | 45.0% | |
| !!! | TGGGGCAGTTGTAGTTTTGA+TGG | - | chr8_4:48552318-48552337 | Msa1329750:five_prime_UTR | 45.0% |
| ATAGCAAATCTTTGACGCCC+TGG | - | chr8_4:48552501-48552520 | Msa1329750:five_prime_UTR | 45.0% | |
| CTCCCTTAGAACCCTAACTC+AGG | + | chr8_4:48544800-48544819 | None:intergenic | 50.0% | |
| GCTTACCGAGACTGCAAGAA+GGG | + | chr8_4:48544921-48544940 | None:intergenic | 50.0% | |
| CTCGGTAAGCCATCGACAAT+CGG | - | chr8_4:48544931-48544950 | Msa1329750:CDS | 50.0% | |
| CTGCTTGATTCTCGTGGTTC+AGG | - | chr8_4:48545146-48545165 | Msa1329750:CDS | 50.0% | |
| ATTCTCGTGGTTCAGGATGG+TGG | - | chr8_4:48545153-48545172 | Msa1329750:CDS | 50.0% | |
| ! | CGACGCTGCTAAACTTTTGG+TGG | - | chr8_4:48545233-48545252 | Msa1329750:intron | 50.0% |
| GCTTGAGCTCATCGTGTCAT+TGG | - | chr8_4:48545607-48545626 | Msa1329750:intron | 50.0% | |
| GATAATCGCAAGGGAGCAAG+GGG | + | chr8_4:48545899-48545918 | None:intergenic | 50.0% | |
| GTGATAATCGCAAGGGAGCA+AGG | + | chr8_4:48545901-48545920 | None:intergenic | 50.0% | |
| ! | GGCTCCTTAGCGAAACGTTT+TGG | + | chr8_4:48545944-48545963 | None:intergenic | 50.0% |
| TTGCCTCTTATGTTGCCCGT+AGG | - | chr8_4:48546449-48546468 | Msa1329750:intron | 50.0% | |
| TCTCCTACGGGCAACATAAG+AGG | + | chr8_4:48546455-48546474 | None:intergenic | 50.0% | |
| TGGATGGGATGGCAAGATAC+AGG | - | chr8_4:48546678-48546697 | Msa1329750:CDS | 50.0% | |
| ATGGGATGGCAAGATACAGG+AGG | - | chr8_4:48546681-48546700 | Msa1329750:CDS | 50.0% | |
| ACAATTTAGGCGACTAGGGG+TGG | + | chr8_4:48546947-48546966 | None:intergenic | 50.0% | |
| ACCCCTAGTCGCCTAAATTG+TGG | - | chr8_4:48546946-48546965 | Msa1329750:intron | 50.0% | |
| GCCACAATTTAGGCGACTAG+GGG | + | chr8_4:48546950-48546969 | None:intergenic | 50.0% | |
| GGCCACAATTTAGGCGACTA+GGG | + | chr8_4:48546951-48546970 | None:intergenic | 50.0% | |
| AGGCCACAATTTAGGCGACT+AGG | + | chr8_4:48546952-48546971 | None:intergenic | 50.0% | |
| GTCGCCTAAATTGTGGCCTT+TGG | - | chr8_4:48546953-48546972 | Msa1329750:intron | 50.0% | |
| !!! | TTTTGTTGGCTTTGAGGGGG+TGG | - | chr8_4:48547007-48547026 | Msa1329750:intron | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | - | chr8_4:48547024-48547043 | Msa1329750:intron | 50.0% |
| CATCTACTGCAGCAGCCAAT+AGG | + | chr8_4:48548004-48548023 | None:intergenic | 50.0% | |
| ! | CTATTGGCTGCTGCAGTAGA+TGG | - | chr8_4:48548002-48548021 | Msa1329750:intron | 50.0% |
| AGCATGAGAACCACTCAGCT+AGG | + | chr8_4:48548460-48548479 | None:intergenic | 50.0% | |
| TAGCTGAGTGGTTCTCATGC+TGG | - | chr8_4:48548459-48548478 | Msa1329750:intron | 50.0% | |
| AGCTGAGTGGTTCTCATGCT+GGG | - | chr8_4:48548460-48548479 | Msa1329750:intron | 50.0% | |
| CCCTAAATGTAGGGTCATGC+TGG | - | chr8_4:48548767-48548786 | Msa1329750:intron | 50.0% | |
| GCCAGCATGACCCTACATTT+AGG | + | chr8_4:48548771-48548790 | None:intergenic | 50.0% | |
| CATAGGAAACAGAGCTCACG+CGG | - | chr8_4:48548960-48548979 | Msa1329750:intron | 50.0% | |
| ! | GCACACAGGAGTGTGTAGTT+GGG | + | chr8_4:48550113-48550132 | None:intergenic | 50.0% |
| ! | TGCACACAGGAGTGTGTAGT+TGG | + | chr8_4:48550114-48550133 | None:intergenic | 50.0% |
| GTGTGTGTGATGTTGCACAC+AGG | + | chr8_4:48550127-48550146 | None:intergenic | 50.0% | |
| GCATTGGATTCCGAAGGATG+TGG | - | chr8_4:48550408-48550427 | Msa1329750:CDS | 50.0% | |
| ACAAGGGGGGGATTTAATGG+TGG | + | chr8_4:48550629-48550648 | None:intergenic | 50.0% | |
| AGCACAAGGGGGGGATTTAA+TGG | + | chr8_4:48550632-48550651 | None:intergenic | 50.0% | |
| CAAAAGTCGATGGACACACC+TGG | + | chr8_4:48551040-48551059 | None:intergenic | 50.0% | |
| AAACCCGTGATCTTGCCGAA+TGG | - | chr8_4:48551495-48551514 | Msa1329750:intron | 50.0% | |
| TCTCCATTCGGCAAGATCAC+GGG | + | chr8_4:48551501-48551520 | None:intergenic | 50.0% | |
| GCGGATCTTTCCAAGGCTTT+CGG | - | chr8_4:48551700-48551719 | Msa1329750:CDS | 50.0% | |
| GATCTTTCCAAGGCTTTCGG+TGG | - | chr8_4:48551703-48551722 | Msa1329750:CDS | 50.0% | |
| ! | AGGTGTGTAGCTTTTCTGGG+AGG | - | chr8_4:48551784-48551803 | Msa1329750:intron | 50.0% |
| TGGTCAGCAGACAGTTGGAA+TGG | + | chr8_4:48551900-48551919 | None:intergenic | 50.0% | |
| ! | TGGCCTTAAGTAGCTGGAGA+TGG | + | chr8_4:48551920-48551939 | None:intergenic | 50.0% |
| ! | TAAGGCCACATTTTGTCCGC+TGG | - | chr8_4:48551932-48551951 | Msa1329750:CDS | 50.0% |
| CTTGACCAGCGGACAAAATG+TGG | + | chr8_4:48551940-48551959 | None:intergenic | 50.0% | |
| ACTATCACTGAGCTCCTCGT+TGG | + | chr8_4:48551989-48552008 | None:intergenic | 50.0% | |
| AACGAGGAGCTCAGTGATAG+TGG | - | chr8_4:48551988-48552007 | Msa1329750:intron | 50.0% | |
| GGTTTCAGGCACAGATGGAA+GGG | - | chr8_4:48552154-48552173 | Msa1329750:intron | 50.0% | |
| AGCTCGCGTAGTACTTGCCT+TGG | + | chr8_4:48544603-48544622 | None:intergenic | 55.0% | |
| GGCTTACCGAGACTGCAAGA+AGG | + | chr8_4:48544922-48544941 | None:intergenic | 55.0% | |
| CTAGGGGTGGACCGCAATAA+AGG | + | chr8_4:48546934-48546953 | None:intergenic | 55.0% | |
| ! | GGTGTTGGAGGCTGCAATGA+AGG | + | chr8_4:48546983-48547002 | None:intergenic | 55.0% |
| GCACTCCTCACCTTACAAGC+CGG | - | chr8_4:48547084-48547103 | Msa1329750:CDS | 55.0% | |
| CTGCAGCAGCCAATAGGGAA+TGG | + | chr8_4:48547998-48548017 | None:intergenic | 55.0% | |
| GGCTAACAAGCCTAGCTGAG+TGG | - | chr8_4:48548447-48548466 | Msa1329750:intron | 55.0% | |
| TTCTCATGCTGGGCTCTGTC+AGG | - | chr8_4:48548470-48548489 | Msa1329750:intron | 55.0% | |
| CTGTCAAAGCAAGGGCCGAT+TGG | - | chr8_4:48550077-48550096 | Msa1329750:intron | 55.0% | |
| GCATGCGCATTGGATTCCGA+AGG | - | chr8_4:48550402-48550421 | Msa1329750:CDS | 55.0% | |
| ! | AACAAGAGGGTGCAGGGTGA+TGG | + | chr8_4:48551150-48551169 | None:intergenic | 55.0% |
| GGAGATGGTCAGCAGACAGT+TGG | + | chr8_4:48551905-48551924 | None:intergenic | 55.0% | |
| !! | TATGGCCGGGAGTGTTGAAG+CGG | - | chr8_4:48552071-48552090 | Msa1329750:intron | 55.0% |
| AAGACCCGCTTCAACACTCC+CGG | + | chr8_4:48552079-48552098 | None:intergenic | 55.0% | |
| GGGTTTCAGGCACAGATGGA+AGG | - | chr8_4:48552153-48552172 | Msa1329750:intron | 55.0% | |
| CGAGTGGAGTGCAGAAGCCA+AGG | - | chr8_4:48544583-48544602 | Msa1329750:three_prime_UTR | 60.0% | |
| TTCAGAGCAGCATGCACCCG+AGG | + | chr8_4:48545857-48545876 | None:intergenic | 60.0% | |
| GGGGTGGACCGCAATAAAGG+CGG | + | chr8_4:48546931-48546950 | None:intergenic | 60.0% | |
| ! | AAGCAAGGGCCGATTGGCTG+AGG | - | chr8_4:48550083-48550102 | Msa1329750:intron | 60.0% |
| GCTCGAGGCGGATCTTTCCA+AGG | - | chr8_4:48551693-48551712 | Msa1329750:CDS | 60.0% | |
| !! | ATGGCCGGGAGTGTTGAAGC+GGG | - | chr8_4:48552072-48552091 | Msa1329750:intron | 60.0% |
| TGCTGGGCTCTGTCAGGCCA+TGG | - | chr8_4:48548476-48548495 | Msa1329750:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 48544491 | 48552640 | 48544491 | ID=Msa1329750;Name=Msa1329750 |
| chr8_4 | mRNA | 48544491 | 48552640 | 48544491 | ID=Msa1329750-mRNA-1;Parent=Msa1329750;Name=Msa1329750-mRNA-1;_AED=0.07;_eAED=0.07;_QI=228|1|1|1|0.93|0.87|16|413|634 |
| chr8_4 | exon | 48544491 | 48545204 | 48544491 | ID=Msa1329750-mRNA-1:exon:13981;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48545346 | 48545530 | 48545346 | ID=Msa1329750-mRNA-1:exon:13980;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48545716 | 48545835 | 48545716 | ID=Msa1329750-mRNA-1:exon:13979;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48546091 | 48546178 | 48546091 | ID=Msa1329750-mRNA-1:exon:13978;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48546289 | 48546372 | 48546289 | ID=Msa1329750-mRNA-1:exon:13977;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48546638 | 48546744 | 48546638 | ID=Msa1329750-mRNA-1:exon:13976;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48546845 | 48546913 | 48546845 | ID=Msa1329750-mRNA-1:exon:13975;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48547027 | 48547152 | 48547027 | ID=Msa1329750-mRNA-1:exon:13974;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48550351 | 48550461 | 48550351 | ID=Msa1329750-mRNA-1:exon:13973;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48550550 | 48550660 | 48550550 | ID=Msa1329750-mRNA-1:exon:13972;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48551167 | 48551403 | 48551167 | ID=Msa1329750-mRNA-1:exon:13971;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48551503 | 48551598 | 48551503 | ID=Msa1329750-mRNA-1:exon:13970;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48551693 | 48551764 | 48551693 | ID=Msa1329750-mRNA-1:exon:13969;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48551880 | 48551963 | 48551880 | ID=Msa1329750-mRNA-1:exon:13968;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48552197 | 48552344 | 48552197 | ID=Msa1329750-mRNA-1:exon:13967;Parent=Msa1329750-mRNA-1 |
| chr8_4 | exon | 48552447 | 48552640 | 48552447 | ID=Msa1329750-mRNA-1:exon:13966;Parent=Msa1329750-mRNA-1 |
| chr8_4 | five_prime_UTR | 48552447 | 48552640 | 48552447 | ID=Msa1329750-mRNA-1:five_prime_utr;Parent=Msa1329750-mRNA-1 |
| chr8_4 | five_prime_UTR | 48552311 | 48552344 | 48552311 | ID=Msa1329750-mRNA-1:five_prime_utr;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48552197 | 48552310 | 48552197 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48551880 | 48551963 | 48551880 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48551693 | 48551764 | 48551693 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48551503 | 48551598 | 48551503 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48551167 | 48551403 | 48551167 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48550550 | 48550660 | 48550550 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48550351 | 48550461 | 48550351 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48547027 | 48547152 | 48547027 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48546845 | 48546913 | 48546845 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48546638 | 48546744 | 48546638 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48546289 | 48546372 | 48546289 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48546091 | 48546178 | 48546091 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48545716 | 48545835 | 48545716 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48545346 | 48545530 | 48545346 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | CDS | 48544904 | 48545204 | 48544904 | ID=Msa1329750-mRNA-1:cds;Parent=Msa1329750-mRNA-1 |
| chr8_4 | three_prime_UTR | 48544491 | 48544903 | 48544491 | ID=Msa1329750-mRNA-1:three_prime_utr;Parent=Msa1329750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
