AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1367840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1367840 MtrunA17_Chr3g0145261 96.741 491 12 2 1 491 1 487 0.0 981
Msa1367840 MtrunA17_Chr8g0391391 61.752 468 173 4 27 491 29 493 0.0 598
Msa1367840 MtrunA17_Chr1g0195271 59.091 462 186 2 27 488 38 496 0.0 561
Msa1367840 MtrunA17_Chr3g0119821 57.602 467 194 3 23 488 30 493 0.0 557
Msa1367840 MtrunA17_Chr3g0080171 57.082 466 191 5 28 491 25 483 0.0 529
Msa1367840 MtrunA17_Chr4g0018361 55.172 493 203 7 6 488 5 489 0.0 523
Msa1367840 MtrunA17_Chr4g0018301 52.891 467 212 4 22 488 39 497 1.68e-179 513
Msa1367840 MtrunA17_Chr8g0388051 50.427 468 221 6 26 486 26 489 3.76e-162 473
Msa1367840 MtrunA17_Chr5g0397201 51.188 463 212 6 27 486 39 490 7.62e-162 468
Msa1367840 MtrunA17_Chr3g0119371 47.143 490 243 7 8 489 25 506 8.87e-154 448
Msa1367840 MtrunA17_Chr5g0439311 42.742 496 268 8 3 489 9 497 1.18e-146 429
Msa1367840 MtrunA17_Chr1g0164201 47.023 487 242 10 9 489 6 482 1.05e-141 416
Msa1367840 MtrunA17_Chr4g0038131 46.467 467 238 6 28 486 28 490 1.68e-140 418
Msa1367840 MtrunA17_Chr3g0086311 46.421 461 232 6 28 486 30 477 1.48e-138 407
Msa1367840 MtrunA17_Chr3g0142501 42.495 473 253 9 27 489 56 519 3.78e-121 365
Msa1367840 MtrunA17_Chr5g0397181 44.444 405 211 6 89 490 1 394 1.83e-119 356
Msa1367840 MtrunA17_Chr8g0372031 42.283 473 252 8 29 490 64 526 4.26e-116 352
Msa1367840 MtrunA17_Chr3g0136381 42.895 380 203 5 9 386 10 377 5.41e-109 330
Msa1367840 MtrunA17_Chr5g0444721 36.036 555 278 12 5 486 12 562 2.98e-105 325
Msa1367840 MtrunA17_Chr4g0018341 50.530 283 131 4 207 488 2 276 4.03e-105 315
Msa1367840 MtrunA17_Chr2g0291461 39.096 509 264 16 10 485 91 586 1.97e-88 283
Msa1367840 MtrunA17_Chr3g0120661 38.193 487 258 17 28 485 116 588 1.41e-85 275
Msa1367840 MtrunA17_Chr3g0126111 35.167 509 289 16 8 485 82 580 3.96e-85 274
Msa1367840 MtrunA17_Chr4g0018351 59.016 183 74 1 28 210 30 211 9.07e-65 208
Msa1367840 MtrunA17_Chr7g0269571 52.096 167 69 1 333 488 43 209 2.73e-56 187
Msa1367840 MtrunA17_Chr4g0022271 54.167 144 60 2 333 475 20 158 5.11e-45 155
Msa1367840 MtrunA17_Chr1g0164181 44.910 167 90 2 321 486 164 329 3.88e-40 147
Msa1367840 MtrunA17_Chr1g0164181 52.632 152 71 1 71 221 4 155 1.91e-39 145
Msa1367840 MtrunA17_Chr4g0072811 37.500 160 90 4 331 485 8 162 1.05e-25 103
Msa1367840 MtrunA17_Chr3g0136371 48.936 94 46 2 386 478 1 93 3.76e-22 91.3
Msa1367840 MtrunA17_Chr7g0269561 45.238 84 32 1 239 322 25 94 2.77e-18 80.9
Msa1367840 MtrunA17_Chr5g0397171 70.455 44 13 0 27 70 40 83 4.14e-15 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1367840 AT4G39010.1 74.255 470 120 1 23 491 24 493 0.0 741
Msa1367840 AT1G70710.1 59.674 491 193 3 3 491 1 488 0.0 610
Msa1367840 AT1G23210.1 57.230 491 205 3 3 491 1 488 0.0 589
Msa1367840 AT4G39000.1 57.613 486 205 1 7 491 4 489 0.0 587
Msa1367840 AT4G38990.2 57.026 491 200 4 7 491 7 492 0.0 575
Msa1367840 AT4G39010.2 71.978 364 101 1 23 385 24 387 0.0 569
Msa1367840 AT4G02290.1 58.874 462 187 2 27 488 51 509 0.0 568
Msa1367840 AT1G02800.1 59.660 471 185 3 18 488 33 498 0.0 563
Msa1367840 AT1G22880.1 55.876 485 205 5 8 491 5 481 1.41e-180 515
Msa1367840 AT1G71380.1 54.752 484 210 5 8 490 5 480 1.90e-180 514
Msa1367840 AT4G02290.2 57.250 400 168 2 89 488 1 397 6.30e-166 475
Msa1367840 AT4G09740.1 49.691 485 228 6 12 491 4 477 2.96e-158 458
Msa1367840 AT4G11050.2 48.421 475 234 6 23 490 21 491 1.76e-157 458
Msa1367840 AT4G11050.1 48.421 475 234 6 23 490 21 491 8.53e-157 459
Msa1367840 AT4G11050.3 48.421 475 234 6 23 490 21 491 1.19e-156 459
Msa1367840 AT4G23560.1 48.454 485 237 5 9 491 4 477 2.68e-156 453
Msa1367840 AT1G64390.1 48.832 471 230 6 23 486 20 486 1.19e-155 456
Msa1367840 AT1G22880.2 55.446 404 172 4 89 491 1 397 3.51e-151 437
Msa1367840 AT2G32990.1 44.422 493 257 7 8 486 13 502 4.87e-148 434
Msa1367840 AT2G44540.1 46.362 481 245 7 11 486 16 488 1.45e-138 408
Msa1367840 AT2G44550.1 46.998 483 240 9 9 486 16 487 2.06e-138 408
Msa1367840 AT2G44570.1 47.433 487 240 9 6 486 13 489 5.34e-138 407
Msa1367840 AT2G44560.1 46.362 481 245 7 11 486 16 488 4.33e-136 402
Msa1367840 AT3G43860.2 45.161 465 240 6 28 490 34 485 2.27e-134 397
Msa1367840 AT3G43860.1 45.161 465 240 6 28 490 34 485 2.27e-134 397
Msa1367840 AT4G38990.1 55.153 359 130 3 7 364 7 335 3.48e-133 389
Msa1367840 AT1G48930.1 46.895 467 237 6 27 486 29 491 4.53e-131 394
Msa1367840 AT1G75680.1 45.633 458 232 8 29 479 58 505 4.87e-128 382
Msa1367840 AT1G19940.2 42.704 466 250 8 25 483 45 500 4.32e-123 369
Msa1367840 AT1G19940.1 42.704 466 250 8 25 483 45 500 4.32e-123 369
Msa1367840 AT1G22880.3 55.963 327 135 5 8 333 5 323 4.25e-111 332
Msa1367840 AT2G44570.2 43.890 401 210 8 6 401 13 403 5.01e-93 288
Msa1367840 AT1G19940.3 41.734 369 202 7 25 386 45 407 4.30e-88 276
Msa1367840 AT5G49720.1 37.795 508 272 15 10 485 88 583 4.57e-82 266
Msa1367840 AT1G65610.1 34.630 514 285 16 8 486 91 588 6.14e-81 264
Msa1367840 AT4G24260.1 35.225 511 285 17 8 486 88 584 3.27e-69 233
Msa1367840 AT4G24260.3 35.038 391 212 16 28 386 108 488 2.38e-40 152
Msa1367840 AT4G24260.2 36.562 320 168 12 28 319 108 420 1.66e-39 149
Msa1367840 AT3G42153.1 42.708 96 47 3 240 331 16 107 7.71e-15 71.2

Find 171 sgRNAs with CRISPR-Local

Find 361 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAACTTCTTCTTAACTTAT+TGG 0.124007 tig0018559:-5876 Msa1367840:three_prime_UTR
GCCGGTGATAACATCAAATT+TGG 0.145877 tig0018559:-11083 Msa1367840:CDS
GAGATTCAACATTTCCTTCT+AGG 0.166797 tig0018559:+6844 Msa1367840:intergenic
ATTAACCTGTTAAGGATTAA+TGG 0.215794 tig0018559:+6250 Msa1367840:intergenic
CTGTTTGTGTCCATGTCTTC+TGG 0.223582 tig0018559:+8665 Msa1367840:intergenic
TTCAATATGCAGACAGTTAC+AGG 0.227377 tig0018559:-8499 Msa1367840:CDS
ATGTGTGAACTTGATGTTTC+AGG 0.237520 tig0018559:+6774 Msa1367840:intergenic
TTTGCTGGCCAATGCCATTT+TGG 0.261265 tig0018559:+11322 Msa1367840:intergenic
CATTGCTTTGAATGTAGTTT+AGG 0.285334 tig0018559:+7228 Msa1367840:intergenic
ATAAACATTGCCACAATTGA+TGG 0.289598 tig0018559:+6635 Msa1367840:intergenic
TGGAAGTATAAAATGGGTTT+GGG 0.290805 tig0018559:+11342 Msa1367840:intergenic
CTCATCTCTACCTTCTATTA+AGG 0.295970 tig0018559:-6484 Msa1367840:CDS
TAATCCCATTAATCCTTAAC+AGG 0.300223 tig0018559:-6255 Msa1367840:three_prime_UTR
TTGGAAGTATAAAATGGGTT+TGG 0.308683 tig0018559:+11341 Msa1367840:intergenic
TGACGTGCGAAATAAGTAAT+TGG 0.317600 tig0018559:+6662 Msa1367840:intergenic
TTAACCTGTTAAGGATTAAT+GGG 0.317615 tig0018559:+6251 Msa1367840:intergenic
ACAGAAGTGGCGTGGGAATT+CGG 0.323001 tig0018559:-11159 Msa1367840:CDS
TTCTTTGAAGGACAACGTTC+GGG 0.326700 tig0018559:-11203 Msa1367840:CDS
TCCTTGTAATTAACCTGTTA+AGG 0.327414 tig0018559:+6242 Msa1367840:intergenic
CAGAAGTGGCGTGGGAATTC+GGG 0.333466 tig0018559:-11158 Msa1367840:CDS
TATATTAATGCGCCATTTGT+TGG 0.343277 tig0018559:-6303 Msa1367840:CDS
TTATCTTACATGGTTGGTTA+TGG 0.346424 tig0018559:-6540 Msa1367840:CDS
AAAGCGTTTCTGAGTTCATT+AGG 0.346536 tig0018559:+10993 Msa1367840:intergenic
ATATTAATGCGCCATTTGTT+GGG 0.347405 tig0018559:-6302 Msa1367840:CDS
CCCCTTGGGTTTATCTTACA+TGG 0.349502 tig0018559:-6550 Msa1367840:CDS
CCTAACCCAAATGTTCTTGT+AGG 0.353533 tig0018559:-6405 Msa1367840:CDS
GAGTAATGTCTCAGAATAAC+CGG 0.358072 tig0018559:+8541 Msa1367840:intergenic
CCATCAAAATCACAATAATA+AGG 0.363676 tig0018559:+8434 Msa1367840:intergenic
ATAGCTCCTACAAGAACATT+TGG 0.366293 tig0018559:+6399 Msa1367840:intergenic
TCTCCGGCGACATCGGAAGC+TGG 0.368714 tig0018559:+8614 Msa1367840:intergenic
TCGTGGAGTGTGATTGAGTT+TGG 0.383558 tig0018559:-11029 Msa1367840:CDS
TTGTACAGGACGAATTGTTA+TGG 0.396581 tig0018559:-7292 Msa1367840:intron
CCTACAAGAACATTTGGGTT+AGG 0.401102 tig0018559:+6405 Msa1367840:intergenic
CGCACTTGCTGCTTCTTCGA+TGG 0.401999 tig0018559:-8582 Msa1367840:CDS
TATGGGGAGCCGCATGGTTA+AGG 0.403036 tig0018559:-7274 Msa1367840:CDS
GTTCTTTGAAGGACAACGTT+CGG 0.406507 tig0018559:-11204 Msa1367840:CDS
CAGAAGACATGGACACAAAC+AGG 0.408396 tig0018559:-8664 Msa1367840:CDS
GTGGTTGTTTGTTAATTGTC+TGG 0.416256 tig0018559:-5939 Msa1367840:three_prime_UTR
TGTACAGGACGAATTGTTAT+GGG 0.417837 tig0018559:-7291 Msa1367840:intron
TCCCACGCCACTTCTGTCTC+TGG 0.419554 tig0018559:+11165 Msa1367840:intergenic
TGTTAGTGCACAAACACTTC+GGG 0.420044 tig0018559:-6613 Msa1367840:CDS
AAGTGCGGCGGCTGTTTCTC+CGG 0.426242 tig0018559:+8598 Msa1367840:intergenic
ATAGTAAAAGGTTTATATAC+AGG 0.427214 tig0018559:-6171 Msa1367840:three_prime_UTR
ACTTACAACACTGATCTTAC+CGG 0.429293 tig0018559:-11119 Msa1367840:CDS
GGGAATTCGGGTTTGAGTGA+TGG 0.430739 tig0018559:-11146 Msa1367840:CDS
GTCTGTCTCTTAAATAAACT+TGG 0.431349 tig0018559:-11489 Msa1367840:five_prime_UTR
CACTTCTGTCTCTGGTCCTC+TGG 0.435129 tig0018559:+11173 Msa1367840:intergenic
TATAAAATGGGTTTGGGGTA+AGG 0.435558 tig0018559:+11348 Msa1367840:intergenic
CTACTACTGGTGATGCTGAT+TGG 0.435595 tig0018559:-11284 Msa1367840:CDS
ACTTGCTTGTGTCTGTTGGC+TGG 0.436665 tig0018559:-6103 Msa1367840:three_prime_UTR
GGAATTCGGGTTTGAGTGAT+GGG 0.438904 tig0018559:-11145 Msa1367840:CDS
GCGACATCGGAAGCTGGGTT+AGG 0.440796 tig0018559:+8620 Msa1367840:intergenic
TTGTTATAGGAAGTCCTAGA+AGG 0.447365 tig0018559:-6858 Msa1367840:intron
CAACAGATTGCTTGCAAGGA+AGG 0.449168 tig0018559:-6453 Msa1367840:CDS
GGCTGTTTCTCCGGCGACAT+CGG 0.450417 tig0018559:+8607 Msa1367840:intergenic
ATGTGATGAATGAAATTAAT+GGG 0.453632 tig0018559:+11373 Msa1367840:intergenic
TTGGGTTTATCTTACATGGT+TGG 0.457905 tig0018559:-6546 Msa1367840:CDS
AATGTAATCAACTTGTCTCT+TGG 0.459625 tig0018559:+6584 Msa1367840:intergenic
CAGTGACAATGCTGATGTTA+AGG 0.460357 tig0018559:-8468 Msa1367840:CDS
ATTACTCAGAAATGCTGTTA+AGG 0.461567 tig0018559:-8525 Msa1367840:CDS
ACGCTTTGGTCGCAATTCGT+TGG 0.466420 tig0018559:-10977 Msa1367840:CDS
GAGAGAGAGATGGGATTTGG+AGG 0.469253 tig0018559:+11552 Msa1367840:intergenic
GGAGCTATTGTGGGAGGACC+TGG 0.473308 tig0018559:-6384 Msa1367840:CDS
ATGGTTAAGGAGGGCTACTC+AGG 0.477602 tig0018559:-7261 Msa1367840:CDS
ATTTGGAGGGAAGTAGTAGT+AGG 0.477831 tig0018559:+11566 Msa1367840:intergenic
TAGCTCCTACAAGAACATTT+GGG 0.479600 tig0018559:+6400 Msa1367840:intergenic
TTATACTTCCAAAATGGCAT+TGG 0.482936 tig0018559:-11330 Msa1367840:exon
TAATGAACTCAGAAACGCTT+TGG 0.483275 tig0018559:-10991 Msa1367840:CDS
AAGGCAATCATGTTCTTTGA+AGG 0.484150 tig0018559:-11215 Msa1367840:CDS
GAAGACAACATTAATGAGTT+CGG 0.484613 tig0018559:-7188 Msa1367840:CDS
TGAGGATGGTCCTTAATAGA+AGG 0.486620 tig0018559:+6474 Msa1367840:intergenic
AGAGACTTGCTTGTGTCTGT+TGG 0.487501 tig0018559:-6107 Msa1367840:three_prime_UTR
CAACAGTTGTGGTCTGAGGT+TGG 0.488075 tig0018559:+8695 Msa1367840:intergenic
CTCCGGCGACATCGGAAGCT+GGG 0.490926 tig0018559:+8615 Msa1367840:intergenic
TGAATGAAATTAATGGGTTG+TGG 0.494144 tig0018559:+11379 Msa1367840:intergenic
CCGGTGATAACATCAAATTT+GGG 0.494860 tig0018559:-11082 Msa1367840:CDS
ACAACATTAATGAGTTCGGT+TGG 0.496036 tig0018559:-7184 Msa1367840:CDS
TTCGATGGCATTCCGATCAT+CGG 0.503475 tig0018559:-8567 Msa1367840:CDS
TGTTGTAAGTTGCTTCCACC+TGG 0.503502 tig0018559:+6720 Msa1367840:intergenic
AACCTCAGACCACAACTGTT+GGG 0.503584 tig0018559:-8693 Msa1367840:CDS
CTCCCAACAGTTGTGGTCTG+AGG 0.506354 tig0018559:+8691 Msa1367840:intergenic
TGTTCTTGTAGGAGCTATTG+TGG 0.507021 tig0018559:-6394 Msa1367840:CDS
TCCTTAACAGGTTAATTACA+AGG 0.507651 tig0018559:-6243 Msa1367840:three_prime_UTR
TAATGGGTTGTGGGTAAAGT+GGG 0.510030 tig0018559:+11389 Msa1367840:intergenic
CCCAAATTTGATGTTATCAC+CGG 0.511014 tig0018559:+11082 Msa1367840:intergenic
TATGCTAAAACCCCAACAAA+TGG 0.511723 tig0018559:+6291 Msa1367840:intergenic
CAACCTCAGACCACAACTGT+TGG 0.514008 tig0018559:-8694 Msa1367840:CDS
GAATGAAATTAATGGGTTGT+GGG 0.515419 tig0018559:+11380 Msa1367840:intergenic
CCTCAACGTTCTTGTCTCCA+AGG 0.518942 tig0018559:-7144 Msa1367840:intron
TTAATGGGTTGTGGGTAAAG+TGG 0.519196 tig0018559:+11388 Msa1367840:intergenic
AATGTGATGAATGAAATTAA+TGG 0.521183 tig0018559:+11372 Msa1367840:intergenic
ATGATGTTTATGTGGATGAC+AGG 0.521412 tig0018559:-6356 Msa1367840:CDS
CAACATTAATGAGTTCGGTT+GGG 0.522809 tig0018559:-7183 Msa1367840:CDS
CTGGCCTCTCCCAACAGTTG+TGG 0.526446 tig0018559:+8684 Msa1367840:intergenic
ATGTTAGTGCACAAACACTT+CGG 0.530340 tig0018559:-6614 Msa1367840:CDS
TCCTCAACAGATTGCTTGCA+AGG 0.531094 tig0018559:-6457 Msa1367840:CDS
AAATGGCGCATTAATATATG+TGG 0.534377 tig0018559:+6308 Msa1367840:intergenic
CTAAACTACATTCAAAGCAA+TGG 0.537231 tig0018559:-7227 Msa1367840:CDS
GGGGAGCCGCATGGTTAAGG+AGG 0.537973 tig0018559:-7271 Msa1367840:CDS
CATCAAATTTGGGTTTCCGA+TGG 0.547688 tig0018559:-11072 Msa1367840:CDS
AGAGAGAGATGGGATTTGGA+GGG 0.549561 tig0018559:+11553 Msa1367840:intergenic
GACCAGAGACAGAAGTGGCG+TGG 0.550720 tig0018559:-11167 Msa1367840:CDS
AATAACCGGGATCCGATGAT+CGG 0.551697 tig0018559:+8555 Msa1367840:intergenic
AAAAGGTTTATATACAGGAA+AGG 0.553561 tig0018559:-6166 Msa1367840:three_prime_UTR
GTTCTTGTAGGAGCTATTGT+GGG 0.555313 tig0018559:-6393 Msa1367840:CDS
TCCTTGCAAGCAATCTGTTG+AGG 0.555459 tig0018559:+6456 Msa1367840:intergenic
CCGACAGATAAACGAGGGAG+AGG 0.556209 tig0018559:+11607 Msa1367840:intergenic
TGTCTGTTGGCTGGATACAT+AGG 0.556277 tig0018559:-6094 Msa1367840:three_prime_UTR
TAGAGATGAGATGGTGTCAC+GGG 0.556783 tig0018559:+11452 Msa1367840:intergenic
TCAATATGCAGACAGTTACA+GGG 0.557642 tig0018559:-8498 Msa1367840:CDS
TCACACATCGAGTACACTCC+TGG 0.560468 tig0018559:-6759 Msa1367840:CDS
TTGGGAGAGGCCAGAAGACA+TGG 0.561765 tig0018559:-8675 Msa1367840:CDS
GGTTGGGACAACAAGCATGC+TGG 0.562101 tig0018559:-7167 Msa1367840:CDS
ATTGTTGTCGTAAACGCCAT+CGG 0.566271 tig0018559:+11056 Msa1367840:intergenic
CTAACGCATTAGAGATGAGA+TGG 0.567462 tig0018559:+11443 Msa1367840:intergenic
ACATAAACATCATCTTCTCC+AGG 0.567710 tig0018559:+6366 Msa1367840:intergenic
TATTAATGCGCCATTTGTTG+GGG 0.570106 tig0018559:-6301 Msa1367840:CDS
ACCAGAGACAGAAGTGGCGT+GGG 0.571423 tig0018559:-11166 Msa1367840:CDS
CTACTGGTGATGCTGATTGG+AGG 0.572389 tig0018559:-11281 Msa1367840:CDS
ATTCGGGTTTGAGTGATGGG+TGG 0.574191 tig0018559:-11142 Msa1367840:CDS
CAAAGCAATGGTAAAACACT+CGG 0.575426 tig0018559:-7215 Msa1367840:CDS
ACCGGCGGTTACTACGACGC+CGG 0.576662 tig0018559:-11101 Msa1367840:CDS
GGAAGTATAAAATGGGTTTG+GGG 0.578043 tig0018559:+11343 Msa1367840:intergenic
AACCCAGCTTCCGATGTCGC+CGG 0.578286 tig0018559:-8617 Msa1367840:CDS
GGCGCATTAATATATGTGGT+TGG 0.580585 tig0018559:+6312 Msa1367840:intergenic
CCTCTCCCTCGTTTATCTGT+CGG 0.582430 tig0018559:-11607 Msa1367840:five_prime_UTR
CTTGTAGGAGCTATTGTGGG+AGG 0.586975 tig0018559:-6390 Msa1367840:CDS
TGGAGAAGATGATGTTTATG+TGG 0.587154 tig0018559:-6364 Msa1367840:CDS
TGCAAGCAATCTGTTGAGGA+TGG 0.591228 tig0018559:+6460 Msa1367840:intergenic
CATCGAAGAAGCAGCAAGTG+CGG 0.597641 tig0018559:+8583 Msa1367840:intergenic
AATTGTTATGGGGAGCCGCA+TGG 0.602591 tig0018559:-7280 Msa1367840:CDS
TCATCTTAAGAAAATCAAGA+AGG 0.603437 tig0018559:-6131 Msa1367840:three_prime_UTR
GCATAGGAAGCTCTCTGCTG+AGG 0.604029 tig0018559:+6806 Msa1367840:intergenic
GCATTCCGATCATCGGATCC+CGG 0.607253 tig0018559:-8560 Msa1367840:CDS
GGTCTGTATATGAGTCCACC+AGG 0.612971 tig0018559:+6741 Msa1367840:intergenic
TTTCAGGTAGTAGTGTGCAT+AGG 0.626912 tig0018559:+6790 Msa1367840:intergenic
CGAAGAAGCAGCAAGTGCGG+CGG 0.628435 tig0018559:+8586 Msa1367840:intergenic
ATTTAACAAGAATAGAGTGA+GGG 0.633690 tig0018559:-5969 Msa1367840:three_prime_UTR
GCGTTTCTGAGTTCATTAGG+AGG 0.634386 tig0018559:+10996 Msa1367840:intergenic
AACCATGTAAGATAAACCCA+AGG 0.635575 tig0018559:+6548 Msa1367840:intergenic
AATTGGCGTAGACTAACTCA+AGG 0.637923 tig0018559:+6679 Msa1367840:intergenic
TTAGAGATGAGATGGTGTCA+CGG 0.639592 tig0018559:+11451 Msa1367840:intergenic
CAGACCACAACTGTTGGGAG+AGG 0.640454 tig0018559:-8688 Msa1367840:CDS
CAGAGGACCAGAGACAGAAG+TGG 0.641335 tig0018559:-11172 Msa1367840:CDS
ACCATGTAAGATAAACCCAA+GGG 0.641726 tig0018559:+6549 Msa1367840:intergenic
ACGTCACAAACCATCAATTG+TGG 0.642957 tig0018559:-6645 Msa1367840:CDS
TACAACACTGATCTTACCGG+CGG 0.646779 tig0018559:-11116 Msa1367840:CDS
TTACGACAACAATGTTGTCG+TGG 0.652135 tig0018559:-11046 Msa1367840:CDS
GACAATGCTGATGTTAAGGA+TGG 0.656075 tig0018559:-8464 Msa1367840:CDS
AATTTAACAAGAATAGAGTG+AGG 0.657793 tig0018559:-5970 Msa1367840:three_prime_UTR
ACCGGCGTCGTAGTAACCGC+CGG 0.660182 tig0018559:+11100 Msa1367840:intergenic
ATAGAGTGAGGGTGTCATTG+TGG 0.661242 tig0018559:-5958 Msa1367840:three_prime_UTR
AGTAATGTCTCAGAATAACC+GGG 0.665758 tig0018559:+8542 Msa1367840:intergenic
GTACAGGACGAATTGTTATG+GGG 0.670217 tig0018559:-7290 Msa1367840:intron
TTATGCGGAGGCATTATCGA+AGG 0.671544 tig0018559:-11234 Msa1367840:CDS
CACATCGAGTACACTCCTGG+TGG 0.672404 tig0018559:-6756 Msa1367840:CDS
TCTTTGAAGGACAACGTTCG+GGG 0.677942 tig0018559:-11202 Msa1367840:CDS
GGTGGACTCATATACAGACC+AGG 0.680214 tig0018559:-6738 Msa1367840:CDS
GGGAGCCGCATGGTTAAGGA+GGG 0.683185 tig0018559:-7270 Msa1367840:CDS
CAATATGCAGACAGTTACAG+GGG 0.695263 tig0018559:-8497 Msa1367840:CDS
CCACGATGATGAATACGTTG+TGG 0.695422 tig0018559:+6507 Msa1367840:intergenic
TGTGAATGCACATGATTATG+CGG 0.701086 tig0018559:-11249 Msa1367840:CDS
GGACTCATATACAGACCAGG+TGG 0.718917 tig0018559:-6735 Msa1367840:CDS
AAGCGCCGACAGATAAACGA+GGG 0.724034 tig0018559:+11602 Msa1367840:intergenic
CCTTGGAGACAAGAACGTTG+AGG 0.724038 tig0018559:+7144 Msa1367840:intergenic
CCACAACGTATTCATCATCG+TGG 0.724350 tig0018559:-6507 Msa1367840:CDS
TGATGTTTATGTGGATGACA+GGG 0.726322 tig0018559:-6355 Msa1367840:CDS
CCATGTAAGATAAACCCAAG+GGG 0.735452 tig0018559:+6550 Msa1367840:intergenic
AGTAGCCCTCCTTAACCATG+CGG 0.745611 tig0018559:+7265 Msa1367840:intergenic
GAATGCACATGATTATGCGG+AGG 0.747781 tig0018559:-11246 Msa1367840:CDS
AAAGCGCCGACAGATAAACG+AGG 0.756166 tig0018559:+11601 Msa1367830:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATAAATAAATAAATAA+AGG + tig0018559:6719-6738 Msa1367840:intergenic 0.0%
!!! TAAATTTCTTTTTTGATTAA+GGG + tig0018559:6782-6801 Msa1367840:intergenic 10.0%
!! TTAATCAAAAAAGAAATTTA+CGG - tig0018559:6782-6801 Msa1367840:CDS 10.0%
!! AATTTACTTATAAAAAGAAA+TGG + tig0018559:6940-6959 Msa1367840:intergenic 10.0%
!!! ATGTAAAATAATTTGATTTT+AGG - tig0018559:7140-7159 Msa1367840:intron 10.0%
!! AAAAAATTTGAAAAAAAATC+AGG - tig0018559:7650-7669 Msa1367840:intron 10.0%
!!! AATTCAAAATTTTACAAAAA+AGG - tig0018559:7815-7834 Msa1367840:intron 10.0%
!! AAAAAATTTGAAAAAAAATC+AGG + tig0018559:7650-7669 Msa1367840:intergenic 10.0%
!! ATTCTCATTAATTTAAAAAT+TGG + tig0018559:8628-8647 Msa1367840:intergenic 10.0%
!! ATATTAGATATATCAAAAAA+TGG - tig0018559:8677-8696 Msa1367840:CDS 10.0%
!!! TTCTAATAATAAATACTTTT+TGG - tig0018559:9437-9456 Msa1367840:intron 10.0%
!! ATTAGTTAATTAATTAAAAG+TGG - tig0018559:9862-9881 Msa1367840:intron 10.0%
!! AAATAAATAAATAAAGGAAG+AGG + tig0018559:6713-6732 Msa1367840:intergenic 15.0%
!!! GTAAATTTCTTTTTTGATTA+AGG + tig0018559:6783-6802 Msa1367840:intergenic 15.0%
!!! AATTTGCTTGTATAAAAAAA+CGG - tig0018559:7017-7036 Msa1367840:intron 15.0%
!!! ATAAATTGGGATTTTAAATT+TGG + tig0018559:8179-8198 Msa1367840:intergenic 15.0%
!!! GGAATTTTTTTTTTAAAATC+TGG - tig0018559:7671-7690 Msa1367840:intron 15.0%
!!! AAAAAGATTTTACAAAATTC+AGG - tig0018559:7761-7780 Msa1367840:intron 15.0%
!!! AAAAAGATTTTACAAAATTC+AGG + tig0018559:7761-7780 Msa1367840:intergenic 15.0%
!!! GGAATTTTTTTTTTAAAATC+TGG + tig0018559:7671-7690 Msa1367840:intergenic 15.0%
!!! ATAAATTGGGATTTTAAATT+TGG - tig0018559:8179-8198 Msa1367840:intron 15.0%
!!! TTTTAGTAGTAATAAAATCA+AGG + tig0018559:8402-8421 Msa1367840:intergenic 15.0%
!! TCATTAATTTAAAAATTGGA+TGG + tig0018559:8624-8643 Msa1367840:intergenic 15.0%
!! TGTCATGTAATTTAATAATT+AGG + tig0018559:8737-8756 Msa1367840:intergenic 15.0%
!!! GAATTTAGAATTATAAAAAC+AGG - tig0018559:9476-9495 Msa1367840:intron 15.0%
!! ATGTGATGAATGAAATTAAT+GGG + tig0018559:6110-6129 Msa1367840:intergenic 20.0%
!! AATGTGATGAATGAAATTAA+TGG + tig0018559:6111-6130 Msa1367840:intergenic 20.0%
!!! CCATTTCAATAAATTGATTT+AGG + tig0018559:6812-6831 Msa1367840:intergenic 20.0%
!! CCTAAATCAATTTATTGAAA+TGG - tig0018559:6809-6828 Msa1367840:CDS 20.0%
!! ACAAAAAAAAAAACTGAAAG+CGG + tig0018559:6890-6909 Msa1367840:intergenic 20.0%
!! TTGTTCACATTTAGAAATAT+AGG - tig0018559:6906-6925 Msa1367840:intron 20.0%
!! TACTTATAAAAAGAAATGGA+AGG + tig0018559:6936-6955 Msa1367840:intergenic 20.0%
!!! TCAAAATCATCATTTTTCTT+AGG + tig0018559:7085-7104 Msa1367840:intergenic 20.0%
!! TGTAGTGATGAAAAAATAAA+GGG + tig0018559:7113-7132 Msa1367840:intergenic 20.0%
!! TTGTAGTGATGAAAAAATAA+AGG + tig0018559:7114-7133 Msa1367840:intergenic 20.0%
!!! TTATTTTTTCATCACTACAA+AGG - tig0018559:7114-7133 Msa1367840:intron 20.0%
!!! GATTTTAAATTTGGCATTAA+GGG + tig0018559:8188-8207 Msa1367840:intergenic 20.0%
!!! AAATCTGGAAATGTTTTTTA+CGG - tig0018559:7686-7705 Msa1367840:intron 20.0%
!!! AAATCTGGAAATGTTTTTTA+CGG + tig0018559:7686-7705 Msa1367840:intergenic 20.0%
!!! GATTTTAAATTTGGCATTAA+GGG - tig0018559:8188-8207 Msa1367840:intron 20.0%
!!! ATTGCATTTTTCCTTTTTAT+AGG - tig0018559:9119-9138 Msa1367840:intron 20.0%
!! AAAATTCAAAACGATAACAT+CGG + tig0018559:9148-9167 Msa1367840:intergenic 20.0%
!!! ACATTGATAATGATAGTATA+TGG - tig0018559:9179-9198 Msa1367840:intron 20.0%
!! TGTATTCATTTCATATCATA+TGG - tig0018559:9366-9385 Msa1367840:intron 20.0%
!! GTATTCATTTCATATCATAT+GGG - tig0018559:9367-9386 Msa1367840:intron 20.0%
!! TATTAGAAATTGAGTGTAAA+AGG + tig0018559:9425-9444 Msa1367840:intergenic 20.0%
!! TAAGGTTTGAAAAATATAAG+CGG - tig0018559:9551-9570 Msa1367840:intron 20.0%
!! TAAATTGAATAGTGCATATT+TGG + tig0018559:9701-9720 Msa1367840:intergenic 20.0%
!! AAATTTGAATTGAATAGAGA+TGG + tig0018559:10364-10383 Msa1367840:intergenic 20.0%
!!! AGTAAATGAATTGTTGTTAT+AGG - tig0018559:10609-10628 Msa1367840:intron 20.0%
!! ATAGTAAAAGGTTTATATAC+AGG - tig0018559:11309-11328 Msa1367840:CDS 20.0%
!!! CCATTTTGGAAGTATAAAAT+GGG + tig0018559:6147-6166 Msa1367840:intergenic 25.0%
! AAATAAATAAAGGAAGAGGA+AGG + tig0018559:6709-6728 Msa1367840:intergenic 25.0%
! GATCGTAAATGTAAATAAAC+TGG + tig0018559:6868-6887 Msa1367840:intergenic 25.0%
! CATTCAATTAATGATGTATG+TGG - tig0018559:6974-6993 Msa1367840:intron 25.0%
! CTGTTACAAAACAAACTTAA+AGG + tig0018559:8267-8286 Msa1367840:intergenic 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG - tig0018559:7217-7236 Msa1367840:CDS 25.0%
! GTTACAAACATCAAACTTAA+AGG + tig0018559:7244-7263 Msa1367840:intergenic 25.0%
! GTTTGATGTTTGTAACATAT+AGG - tig0018559:7248-7267 Msa1367840:CDS 25.0%
! CTGTTACAAAACAAACTTAA+AGG + tig0018559:8267-8286 Msa1367840:intergenic 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG - tig0018559:7217-7236 Msa1367840:CDS 25.0%
! ATTACAAACGTCAAACTTAA+AGG + tig0018559:8238-8257 Msa1367840:intergenic 25.0%
!! GGATTTTAAATTTGGCATTA+AGG + tig0018559:8187-8206 Msa1367840:intergenic 25.0%
!! TTTTACGGATTTAGTCAAAA+TGG - tig0018559:7701-7720 Msa1367840:intron 25.0%
!! TTTTACGGATTTAGTCAAAA+TGG + tig0018559:7701-7720 Msa1367840:intergenic 25.0%
!! GGATTTTAAATTTGGCATTA+AGG - tig0018559:8187-8206 Msa1367840:intron 25.0%
! ATTACAAACGTCAAACTTAA+AGG - tig0018559:8238-8257 Msa1367840:intron 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG + tig0018559:7217-7236 Msa1367840:intergenic 25.0%
! CTGTTACAAAACAAACTTAA+AGG - tig0018559:8267-8286 Msa1367840:intron 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG + tig0018559:7217-7236 Msa1367840:intergenic 25.0%
! CTGTTACAAAACAAACTTAA+AGG - tig0018559:8267-8286 Msa1367840:intron 25.0%
! GTATACAGTTATAATCGAAA+CGG + tig0018559:8568-8587 Msa1367840:intergenic 25.0%
!!! AAATGGTTGATGACAAAATT+TGG - tig0018559:8694-8713 Msa1367840:CDS 25.0%
! CCATCAAAATCACAATAATA+AGG + tig0018559:9049-9068 Msa1367840:intergenic 25.0%
!! CCTTATTATTGTGATTTTGA+TGG - tig0018559:9046-9065 Msa1367840:intron 25.0%
! CAATCAACATCGAATTATAT+AGG - tig0018559:9993-10012 Msa1367840:intron 25.0%
! TTATTACTAGTACTATGTGA+AGG - tig0018559:10055-10074 Msa1367840:intron 25.0%
! TATTACTAGTACTATGTGAA+GGG - tig0018559:10056-10075 Msa1367840:intron 25.0%
!! CTATTTGCTACACTATTAAT+TGG - tig0018559:10150-10169 Msa1367840:intron 25.0%
!!! AGACAAGTTGATTACATTTT+AGG - tig0018559:10901-10920 Msa1367840:intron 25.0%
! TTAACCTGTTAAGGATTAAT+GGG + tig0018559:11232-11251 Msa1367840:intergenic 25.0%
! ATTAACCTGTTAAGGATTAA+TGG + tig0018559:11233-11252 Msa1367840:intergenic 25.0%
!! CTTCTTTTGTAGATAGTAAA+AGG - tig0018559:11297-11316 Msa1367840:CDS 25.0%
! AAAAGGTTTATATACAGGAA+AGG - tig0018559:11314-11333 Msa1367840:CDS 25.0%
! TCATCTTAAGAAAATCAAGA+AGG - tig0018559:11349-11368 Msa1367840:five_prime_UTR 25.0%
! AATTTAACAAGAATAGAGTG+AGG - tig0018559:11510-11529 Msa1367840:five_prime_UTR 25.0%
! ATTTAACAAGAATAGAGTGA+GGG - tig0018559:11511-11530 Msa1367840:five_prime_UTR 25.0%
! CTAACTTCTTCTTAACTTAT+TGG - tig0018559:11604-11623 Msa1367840:five_prime_UTR 25.0%
GTCTGTCTCTTAAATAAACT+TGG - tig0018559:5991-6010 Msa1367840:three_prime_UTR 30.0%
!! GAATGAAATTAATGGGTTGT+GGG + tig0018559:6103-6122 Msa1367840:intergenic 30.0%
!! TGAATGAAATTAATGGGTTG+TGG + tig0018559:6104-6123 Msa1367840:intergenic 30.0%
! TGGAAGTATAAAATGGGTTT+GGG + tig0018559:6141-6160 Msa1367840:intergenic 30.0%
! TTGGAAGTATAAAATGGGTT+TGG + tig0018559:6142-6161 Msa1367840:intergenic 30.0%
! CCCATTTTATACTTCCAAAA+TGG - tig0018559:6144-6163 Msa1367840:three_prime_UTR 30.0%
!! GCCATTTTGGAAGTATAAAA+TGG + tig0018559:6148-6167 Msa1367840:intergenic 30.0%
TTATACTTCCAAAATGGCAT+TGG - tig0018559:6150-6169 Msa1367840:three_prime_UTR 30.0%
AACAAACAAAAACGATTTGC+TGG + tig0018559:6176-6195 Msa1367840:intergenic 30.0%
!! GTTTTTGTTTGTTCTACTAC+TGG - tig0018559:6183-6202 Msa1367840:three_prime_UTR 30.0%
ATTGTACCTGAACAAAAATG+CGG + tig0018559:6567-6586 Msa1367840:intergenic 30.0%
ACAATTTACTACTGAATCGT+TGG - tig0018559:6582-6601 Msa1367840:CDS 30.0%
CAATTTACTACTGAATCGTT+GGG - tig0018559:6583-6602 Msa1367840:CDS 30.0%
TTGCTTGTATAAAAAAACGG+AGG - tig0018559:7020-7039 Msa1367840:intron 30.0%
TGCTTGTATAAAAAAACGGA+GGG - tig0018559:7021-7040 Msa1367840:intron 30.0%
GTTACAAACGTCAAACTTAA+AGG + tig0018559:8358-8377 Msa1367840:intergenic 30.0%
GTTTGACGTTTGTAACATAT+AGG - tig0018559:7188-7207 Msa1367840:CDS 30.0%
!!! TTTGGCATTAAGGGTATTTT+GGG + tig0018559:8197-8216 Msa1367840:intergenic 30.0%
!!! ATTTGGCATTAAGGGTATTT+TGG + tig0018559:8196-8215 Msa1367840:intergenic 30.0%
!!! ATTTGGCATTAAGGGTATTT+TGG - tig0018559:8196-8215 Msa1367840:intron 30.0%
!!! TTTGGCATTAAGGGTATTTT+GGG - tig0018559:8197-8216 Msa1367840:intron 30.0%
! GTTTGAGGTTTGTAACATAT+AGG + tig0018559:8294-8313 Msa1367840:intergenic 30.0%
GTTACAAACCTCAAACTTAA+AGG - tig0018559:8298-8317 Msa1367840:intron 30.0%
GTTTGACGTTTGTAACATAT+AGG + tig0018559:7188-7207 Msa1367840:intergenic 30.0%
GTTACAAACGTCAAACTTAA+AGG - tig0018559:8358-8377 Msa1367840:intron 30.0%
!! AAATTTTCCGTGTCATTATG+TGG - tig0018559:8445-8464 Msa1367840:CDS 30.0%
AGTTATAATCGAAACGGAAA+TGG + tig0018559:8562-8581 Msa1367840:intergenic 30.0%
ACATTGTACATGCTACTATT+AGG - tig0018559:8754-8773 Msa1367840:intron 30.0%
ATTACTCAGAAATGCTGTTA+AGG - tig0018559:8955-8974 Msa1367840:intron 30.0%
AACTATACTACTTACTAACC+TGG + tig0018559:9075-9094 Msa1367840:intergenic 30.0%
AACATCGGATACCTATAAAA+AGG + tig0018559:9133-9152 Msa1367840:intergenic 30.0%
! ATTTCATATCATATGGGCTA+TGG - tig0018559:9373-9392 Msa1367840:intron 30.0%
TAGAAATTGAGTGTAAAAGG+TGG + tig0018559:9422-9441 Msa1367840:intergenic 30.0%
! ACAAGTGATTTTGCGAAATA+AGG - tig0018559:9533-9552 Msa1367840:intron 30.0%
GTTTGAAAAATATAAGCGGT+GGG - tig0018559:9555-9574 Msa1367840:intron 30.0%
!!! TTTGGAATTTTTTGCCAGTT+AGG - tig0018559:9578-9597 Msa1367840:intron 30.0%
ACAACAAAGCTTCTGTAAAA+CGG + tig0018559:9637-9656 Msa1367840:intergenic 30.0%
! AATTGCATCTCGAGAATTTT+TGG - tig0018559:9939-9958 Msa1367840:intron 30.0%
ATTACTAGTACTATGTGAAG+GGG - tig0018559:10057-10076 Msa1367840:intron 30.0%
TGCTACACTATTAATTGGTT+TGG - tig0018559:10155-10174 Msa1367840:intron 30.0%
TTGGATACATTACATTGTAC+AGG - tig0018559:10174-10193 Msa1367840:intron 30.0%
! CATTGCTTTGAATGTAGTTT+AGG + tig0018559:10255-10274 Msa1367840:intergenic 30.0%
CTAAACTACATTCAAAGCAA+TGG - tig0018559:10253-10272 Msa1367840:intron 30.0%
GAAGACAACATTAATGAGTT+CGG - tig0018559:10292-10311 Msa1367840:intron 30.0%
ATAAACATTGCCACAATTGA+TGG + tig0018559:10848-10867 Msa1367840:intergenic 30.0%
AATGTAATCAACTTGTCTCT+TGG + tig0018559:10899-10918 Msa1367840:intergenic 30.0%
! TTATCTTACATGGTTGGTTA+TGG - tig0018559:10940-10959 Msa1367840:CDS 30.0%
AAATGGCGCATTAATATATG+TGG + tig0018559:11175-11194 Msa1367840:intergenic 30.0%
TATATTAATGCGCCATTTGT+TGG - tig0018559:11177-11196 Msa1367840:CDS 30.0%
ATATTAATGCGCCATTTGTT+GGG - tig0018559:11178-11197 Msa1367840:CDS 30.0%
TAATCCCATTAATCCTTAAC+AGG - tig0018559:11225-11244 Msa1367840:CDS 30.0%
TCCTTAACAGGTTAATTACA+AGG - tig0018559:11237-11256 Msa1367840:CDS 30.0%
TCCTTGTAATTAACCTGTTA+AGG + tig0018559:11241-11260 Msa1367840:intergenic 30.0%
! ATATGTGACTTTTCCATTGA+AGG - tig0018559:11437-11456 Msa1367840:five_prime_UTR 30.0%
! TATGTGACTTTTCCATTGAA+GGG - tig0018559:11438-11457 Msa1367840:five_prime_UTR 30.0%
AATCAAAACAAAAAGCTTCG+TGG + tig0018559:11574-11593 Msa1367840:intergenic 30.0%
AAAAAGAGAGAGAGAGAGAT+GGG + tig0018559:5940-5959 Msa1367840:intergenic 35.0%
AAAAAAGAGAGAGAGAGAGA+TGG + tig0018559:5941-5960 Msa1367840:intergenic 35.0%
! TATAAAATGGGTTTGGGGTA+AGG + tig0018559:6135-6154 Msa1367840:intergenic 35.0%
! GGAAGTATAAAATGGGTTTG+GGG + tig0018559:6140-6159 Msa1367840:intergenic 35.0%
TGTGAATGCACATGATTATG+CGG - tig0018559:6231-6250 Msa1367840:three_prime_UTR 35.0%
AAGGCAATCATGTTCTTTGA+AGG - tig0018559:6265-6284 Msa1367840:exon 35.0%
ACTTACAACACTGATCTTAC+CGG - tig0018559:6361-6380 Msa1367840:CDS 35.0%
CCCAAATTTGATGTTATCAC+CGG + tig0018559:6401-6420 Msa1367840:intergenic 35.0%
CCGGTGATAACATCAAATTT+GGG - tig0018559:6398-6417 Msa1367840:CDS 35.0%
! AAAGCGTTTCTGAGTTCATT+AGG + tig0018559:6490-6509 Msa1367840:intergenic 35.0%
TAATGAACTCAGAAACGCTT+TGG - tig0018559:6489-6508 Msa1367840:CDS 35.0%
TTCTTAGGAACGACTAAACA+TGG + tig0018559:7070-7089 Msa1367840:intergenic 35.0%
TTTAGGCTTAATTACACCAC+AGG - tig0018559:7157-7176 Msa1367840:CDS 35.0%
! AGATAGGTCCTTTAAGTTTG+AGG + tig0018559:7233-7252 Msa1367840:intergenic 35.0%
TTGAAGTCCGTGAATTTCAT+CGG - tig0018559:8492-8511 Msa1367840:CDS 35.0%
TTGTACATGCTACTATTAGG+TGG - tig0018559:8757-8776 Msa1367840:intron 35.0%
TGTACATGCTACTATTAGGT+GGG - tig0018559:8758-8777 Msa1367840:intron 35.0%
AGTAATGTCTCAGAATAACC+GGG + tig0018559:8941-8960 Msa1367840:intergenic 35.0%
GAGTAATGTCTCAGAATAAC+CGG + tig0018559:8942-8961 Msa1367840:intergenic 35.0%
TTCAATATGCAGACAGTTAC+AGG - tig0018559:8981-9000 Msa1367840:intron 35.0%
TCAATATGCAGACAGTTACA+GGG - tig0018559:8982-9001 Msa1367840:intron 35.0%
!! TTGTGATTTTGATGGATACC+AGG - tig0018559:9054-9073 Msa1367840:intron 35.0%
AAATCCGAAGCAAACTATTG+TGG - tig0018559:9294-9313 Msa1367840:intron 35.0%
!! TTTGCCACAATAGTTTGCTT+CGG + tig0018559:9301-9320 Msa1367840:intergenic 35.0%
GGTTTGAAAAATATAAGCGG+TGG - tig0018559:9554-9573 Msa1367840:intron 35.0%
! AAAAATATAAGCGGTGGGTT+TGG - tig0018559:9560-9579 Msa1367840:intron 35.0%
TAACACTTCCATTATGTGTC+GGG + tig0018559:9915-9934 Msa1367840:intergenic 35.0%
GTAACACTTCCATTATGTGT+CGG + tig0018559:9916-9935 Msa1367840:intergenic 35.0%
AAGGGGTAATATTTGTCTGA+GGG - tig0018559:10074-10093 Msa1367840:intron 35.0%
TTGTACAGGACGAATTGTTA+TGG - tig0018559:10188-10207 Msa1367840:intron 35.0%
TGTACAGGACGAATTGTTAT+GGG - tig0018559:10189-10208 Msa1367840:intron 35.0%
CAAAGCAATGGTAAAACACT+CGG - tig0018559:10265-10284 Msa1367840:intron 35.0%
ACAACATTAATGAGTTCGGT+TGG - tig0018559:10296-10315 Msa1367840:intron 35.0%
CAACATTAATGAGTTCGGTT+GGG - tig0018559:10297-10316 Msa1367840:intron 35.0%
ATTGAATAGAGATGGAACCT+TGG + tig0018559:10356-10375 Msa1367840:intergenic 35.0%
TTGTTATAGGAAGTCCTAGA+AGG - tig0018559:10622-10641 Msa1367840:intron 35.0%
GAGATTCAACATTTCCTTCT+AGG + tig0018559:10639-10658 Msa1367840:intergenic 35.0%
ATGTGTGAACTTGATGTTTC+AGG + tig0018559:10709-10728 Msa1367840:intergenic 35.0%
TGACGTGCGAAATAAGTAAT+TGG + tig0018559:10821-10840 Msa1367840:intergenic 35.0%
ATGTTAGTGCACAAACACTT+CGG - tig0018559:10866-10885 Msa1367840:intron 35.0%
!! ATTTTAGGTGATAACCCCTT+GGG - tig0018559:10916-10935 Msa1367840:intron 35.0%
ACCATGTAAGATAAACCCAA+GGG + tig0018559:10934-10953 Msa1367840:intergenic 35.0%
AACCATGTAAGATAAACCCA+AGG + tig0018559:10935-10954 Msa1367840:intergenic 35.0%
TTGGGTTTATCTTACATGGT+TGG - tig0018559:10934-10953 Msa1367840:CDS 35.0%
CTCATCTCTACCTTCTATTA+AGG - tig0018559:10996-11015 Msa1367840:CDS 35.0%
TAGCTCCTACAAGAACATTT+GGG + tig0018559:11083-11102 Msa1367840:intergenic 35.0%
ATAGCTCCTACAAGAACATT+TGG + tig0018559:11084-11103 Msa1367840:intergenic 35.0%
ACATAAACATCATCTTCTCC+AGG + tig0018559:11117-11136 Msa1367840:intergenic 35.0%
TGGAGAAGATGATGTTTATG+TGG - tig0018559:11116-11135 Msa1367840:CDS 35.0%
ATGATGTTTATGTGGATGAC+AGG - tig0018559:11124-11143 Msa1367840:CDS 35.0%
TGATGTTTATGTGGATGACA+GGG - tig0018559:11125-11144 Msa1367840:CDS 35.0%
! TATTAATGCGCCATTTGTTG+GGG - tig0018559:11179-11198 Msa1367840:CDS 35.0%
TATGCTAAAACCCCAACAAA+TGG + tig0018559:11192-11211 Msa1367840:intergenic 35.0%
! GTGGTTGTTTGTTAATTGTC+TGG - tig0018559:11541-11560 Msa1367840:five_prime_UTR 35.0%
ATTTGGAGGGAAGTAGTAGT+AGG + tig0018559:5917-5936 Msa1367840:intergenic 40.0%
! TTAGAGATGAGATGGTGTCA+CGG + tig0018559:6032-6051 Msa1367840:intergenic 40.0%
CTAACGCATTAGAGATGAGA+TGG + tig0018559:6040-6059 Msa1367840:intergenic 40.0%
!! TAATGGGTTGTGGGTAAAGT+GGG + tig0018559:6094-6113 Msa1367840:intergenic 40.0%
!! TTAATGGGTTGTGGGTAAAG+TGG + tig0018559:6095-6114 Msa1367840:intergenic 40.0%
! GTTCTTTGAAGGACAACGTT+CGG - tig0018559:6276-6295 Msa1367840:CDS 40.0%
! TTCTTTGAAGGACAACGTTC+GGG - tig0018559:6277-6296 Msa1367840:CDS 40.0%
GCCGGTGATAACATCAAATT+TGG - tig0018559:6397-6416 Msa1367840:CDS 40.0%
! CATCAAATTTGGGTTTCCGA+TGG - tig0018559:6408-6427 Msa1367840:CDS 40.0%
ATTGTTGTCGTAAACGCCAT+CGG + tig0018559:6427-6446 Msa1367840:intergenic 40.0%
TTACGACAACAATGTTGTCG+TGG - tig0018559:6434-6453 Msa1367840:CDS 40.0%
! GTCTAACCGCATTTTTGTTC+AGG - tig0018559:6558-6577 Msa1367840:CDS 40.0%
ATAAACTGGCACAGCTATCA+AGG + tig0018559:6854-6873 Msa1367840:intergenic 40.0%
TCAAGGCTTAATTACACCAC+AGG + tig0018559:8385-8404 Msa1367840:intergenic 40.0%
GATGAAATTCACGGACTTCA+AGG + tig0018559:8493-8512 Msa1367840:intergenic 40.0%
TTGCAAGCCGATGAAATTCA+CGG + tig0018559:8502-8521 Msa1367840:intergenic 40.0%
ATGAGTAACACTGCCATGTT+TGG + tig0018559:8598-8617 Msa1367840:intergenic 40.0%
CAATATGCAGACAGTTACAG+GGG - tig0018559:8983-9002 Msa1367840:intron 40.0%
CAGTGACAATGCTGATGTTA+AGG - tig0018559:9012-9031 Msa1367840:intron 40.0%
GACAATGCTGATGTTAAGGA+TGG - tig0018559:9016-9035 Msa1367840:intron 40.0%
! TAGAGTGTTTGATCACGTGA+AGG + tig0018559:9222-9241 Msa1367840:intergenic 40.0%
! ATATCATATGGGCTATGGCA+TGG - tig0018559:9378-9397 Msa1367840:intron 40.0%
! TATCATATGGGCTATGGCAT+GGG - tig0018559:9379-9398 Msa1367840:intron 40.0%
TGAGTGTAAAAGGTGGATGT+GGG + tig0018559:9415-9434 Msa1367840:intergenic 40.0%
TTGAGTGTAAAAGGTGGATG+TGG + tig0018559:9416-9435 Msa1367840:intergenic 40.0%
! TTTTGCCAGTTAGGACATGT+CGG - tig0018559:9587-9606 Msa1367840:intron 40.0%
GAAGGGGTAATATTTGTCTG+AGG - tig0018559:10073-10092 Msa1367840:intron 40.0%
AGGGCAATTCGTGTATTTAG+TGG - tig0018559:10093-10112 Msa1367840:intron 40.0%
GTACAGGACGAATTGTTATG+GGG - tig0018559:10190-10209 Msa1367840:intron 40.0%
! TTTCAGGTAGTAGTGTGCAT+AGG + tig0018559:10693-10712 Msa1367840:intergenic 40.0%
AATTGGCGTAGACTAACTCA+AGG + tig0018559:10804-10823 Msa1367840:intergenic 40.0%
TGTTAGTGCACAAACACTTC+GGG - tig0018559:10867-10886 Msa1367840:intron 40.0%
!! CATTTTAGGTGATAACCCCT+TGG - tig0018559:10915-10934 Msa1367840:intron 40.0%
CCATGTAAGATAAACCCAAG+GGG + tig0018559:10933-10952 Msa1367840:intergenic 40.0%
TGAGGATGGTCCTTAATAGA+AGG + tig0018559:11009-11028 Msa1367840:intergenic 40.0%
! CCTACAAGAACATTTGGGTT+AGG + tig0018559:11078-11097 Msa1367840:intergenic 40.0%
CCTAACCCAAATGTTCTTGT+AGG - tig0018559:11075-11094 Msa1367840:CDS 40.0%
TGTTCTTGTAGGAGCTATTG+TGG - tig0018559:11086-11105 Msa1367840:CDS 40.0%
GTTCTTGTAGGAGCTATTGT+GGG - tig0018559:11087-11106 Msa1367840:CDS 40.0%
GGCGCATTAATATATGTGGT+TGG + tig0018559:11171-11190 Msa1367840:intergenic 40.0%
!! TCTCGTTTTTCACCCTTCAA+TGG + tig0018559:11453-11472 Msa1367840:intergenic 40.0%
AGAGAGAGATGGGATTTGGA+GGG + tig0018559:5930-5949 Msa1367840:intergenic 45.0%
AGAGAGAGAGAGATGGGATT+TGG + tig0018559:5934-5953 Msa1367840:intergenic 45.0%
!! TAGAGATGAGATGGTGTCAC+GGG + tig0018559:6031-6050 Msa1367840:intergenic 45.0%
!! TTTGCTGGCCAATGCCATTT+TGG + tig0018559:6161-6180 Msa1367840:intergenic 45.0%
! CTACTACTGGTGATGCTGAT+TGG - tig0018559:6196-6215 Msa1367840:three_prime_UTR 45.0%
GAATGCACATGATTATGCGG+AGG - tig0018559:6234-6253 Msa1367840:three_prime_UTR 45.0%
!! TTATGCGGAGGCATTATCGA+AGG - tig0018559:6246-6265 Msa1367840:three_prime_UTR 45.0%
! TCTTTGAAGGACAACGTTCG+GGG - tig0018559:6278-6297 Msa1367840:CDS 45.0%
! GGAATTCGGGTTTGAGTGAT+GGG - tig0018559:6335-6354 Msa1367840:CDS 45.0%
TACAACACTGATCTTACCGG+CGG - tig0018559:6364-6383 Msa1367840:CDS 45.0%
TCGTGGAGTGTGATTGAGTT+TGG - tig0018559:6451-6470 Msa1367840:CDS 45.0%
GCGTTTCTGAGTTCATTAGG+AGG + tig0018559:6487-6506 Msa1367840:intergenic 45.0%
TATCAAGGAAGAACGCACGA+TGG + tig0018559:6839-6858 Msa1367840:intergenic 45.0%
CGTCAAACTTAAAGGACCTG+TGG + tig0018559:8366-8385 Msa1367840:intergenic 45.0%
CGTCAAACTTAAAGGACCTG+TGG - tig0018559:8366-8385 Msa1367840:intron 45.0%
! TTCCGTGTCATTATGTGGAC+TGG - tig0018559:8450-8469 Msa1367840:CDS 45.0%
CTCCAGTCCACATAATGACA+CGG + tig0018559:8455-8474 Msa1367840:intergenic 45.0%
!! TGTCATTATGTGGACTGGAG+TGG - tig0018559:8455-8474 Msa1367840:CDS 45.0%
AACCTCAGACCACAACTGTT+GGG - tig0018559:8787-8806 Msa1367840:intron 45.0%
CTGTTTGTGTCCATGTCTTC+TGG + tig0018559:8818-8837 Msa1367840:intergenic 45.0%
CAGAAGACATGGACACAAAC+AGG - tig0018559:8816-8835 Msa1367840:intron 45.0%
TTCGATGGCATTCCGATCAT+CGG - tig0018559:8913-8932 Msa1367840:intron 45.0%
AATAACCGGGATCCGATGAT+CGG + tig0018559:8928-8947 Msa1367840:intergenic 45.0%
TTACACCGACATGTCCTAAC+TGG + tig0018559:9595-9614 Msa1367840:intergenic 45.0%
GTTAGGACATGTCGGTGTAA+TGG - tig0018559:9595-9614 Msa1367840:intron 45.0%
TGTTGTAAGTTGCTTCCACC+TGG + tig0018559:10763-10782 Msa1367840:intergenic 45.0%
CCCCTTGGGTTTATCTTACA+TGG - tig0018559:10930-10949 Msa1367840:CDS 45.0%
CCACGATGATGAATACGTTG+TGG + tig0018559:10976-10995 Msa1367840:intergenic 45.0%
CCACAACGTATTCATCATCG+TGG - tig0018559:10973-10992 Msa1367840:CDS 45.0%
TGCAAGCAATCTGTTGAGGA+TGG + tig0018559:11023-11042 Msa1367840:intergenic 45.0%
TCCTCAACAGATTGCTTGCA+AGG - tig0018559:11023-11042 Msa1367840:CDS 45.0%
TCCTTGCAAGCAATCTGTTG+AGG + tig0018559:11027-11046 Msa1367840:intergenic 45.0%
CAACAGATTGCTTGCAAGGA+AGG - tig0018559:11027-11046 Msa1367840:CDS 45.0%
! AGAGACTTGCTTGTGTCTGT+TGG - tig0018559:11373-11392 Msa1367840:five_prime_UTR 45.0%
! TGTCTGTTGGCTGGATACAT+AGG - tig0018559:11386-11405 Msa1367840:five_prime_UTR 45.0%
!! ATAGAGTGAGGGTGTCATTG+TGG - tig0018559:11522-11541 Msa1367840:five_prime_UTR 45.0%
!!! TTTATTTATTTATTACATTT+TGG - tig0018559:6726-6745 Msa1367840:CDS 5.0%
!!! TTTATTTTTGAAAATAAATT+GGG + tig0018559:8166-8185 Msa1367840:intergenic 5.0%
!!! TTTTATTTTTGAAAATAAAT+TGG + tig0018559:8165-8184 Msa1367840:intergenic 5.0%
!! ATAAAAAAAATCTAAAAAAT+TGG - tig0018559:7391-7410 Msa1367840:intron 5.0%
!! ATAAAAAAAATCTAAAAAAT+TGG - tig0018559:7391-7410 Msa1367840:intron 5.0%
!! ATAAAAAAAATCTAAAAAAT+TGG + tig0018559:7391-7410 Msa1367840:intergenic 5.0%
!!! TTTTATTTTTGAAAATAAAT+TGG - tig0018559:8165-8184 Msa1367840:intron 5.0%
!!! TTTATTTTTGAAAATAAATT+GGG - tig0018559:8166-8185 Msa1367840:intron 5.0%
CCTCTCCCTCGTTTATCTGT+CGG - tig0018559:5873-5892 Msa1367840:three_prime_UTR 50.0%
!! AAGCGCCGACAGATAAACGA+GGG + tig0018559:5881-5900 Msa1367840:intergenic 50.0%
!! AAAGCGCCGACAGATAAACG+AGG + tig0018559:5882-5901 Msa1367840:intergenic 50.0%
GAGAGAGAGATGGGATTTGG+AGG + tig0018559:5931-5950 Msa1367840:intergenic 50.0%
! CTACTGGTGATGCTGATTGG+AGG - tig0018559:6199-6218 Msa1367840:three_prime_UTR 50.0%
! ACGTTCGGGGTTTTTACCAG+AGG - tig0018559:6291-6310 Msa1367840:CDS 50.0%
ACAGAAGTGGCGTGGGAATT+CGG - tig0018559:6321-6340 Msa1367840:CDS 50.0%
! GGGAATTCGGGTTTGAGTGA+TGG - tig0018559:6334-6353 Msa1367840:CDS 50.0%
! ATTCGGGTTTGAGTGATGGG+TGG - tig0018559:6338-6357 Msa1367840:CDS 50.0%
ACGCTTTGGTCGCAATTCGT+TGG - tig0018559:6503-6522 Msa1367840:CDS 50.0%
! TGGGTTGACTCACTCACTCA+CGG - tig0018559:6602-6621 Msa1367840:CDS 50.0%
TTGACTCACTCACTCACGGA+CGG - tig0018559:6606-6625 Msa1367840:CDS 50.0%
GAGTGAGTGAGAGAGAGAAG+TGG + tig0018559:6649-6668 Msa1367840:intergenic 50.0%
AGGAAGAGGAAGGAGTGAGT+AGG + tig0018559:6699-6718 Msa1367840:intergenic 50.0%
CGGACTTCAAGGATACGAAC+TGG + tig0018559:8482-8501 Msa1367840:intergenic 50.0%
! CAACAGTTGTGGTCTGAGGT+TGG + tig0018559:8788-8807 Msa1367840:intergenic 50.0%
CAACCTCAGACCACAACTGT+TGG - tig0018559:8786-8805 Msa1367840:intron 50.0%
CATCGAAGAAGCAGCAAGTG+CGG + tig0018559:8900-8919 Msa1367840:intergenic 50.0%
CACGTGATCCCGACACATAA+TGG - tig0018559:9904-9923 Msa1367840:intron 50.0%
AATTGTTATGGGGAGCCGCA+TGG - tig0018559:10200-10219 Msa1367840:intron 50.0%
AGTAGCCCTCCTTAACCATG+CGG + tig0018559:10218-10237 Msa1367840:intergenic 50.0%
ATGGTTAAGGAGGGCTACTC+AGG - tig0018559:10219-10238 Msa1367840:intron 50.0%
CCTTGGAGACAAGAACGTTG+AGG + tig0018559:10339-10358 Msa1367840:intergenic 50.0%
CCTCAACGTTCTTGTCTCCA+AGG - tig0018559:10336-10355 Msa1367840:intron 50.0%
AAAAAACAATTCGCCCCCCG+TGG - tig0018559:10445-10464 Msa1367840:intron 50.0%
AAAAACAATTCGCCCCCCGT+GGG - tig0018559:10446-10465 Msa1367840:intron 50.0%
GCTCTTAACCTTGTGGTCGT+GGG + tig0018559:10479-10498 Msa1367840:intergenic 50.0%
GCTCTACCAACTGAGCTAGA+CGG - tig0018559:10504-10523 Msa1367840:intron 50.0%
CTCTACCAACTGAGCTAGAC+GGG - tig0018559:10505-10524 Msa1367840:intron 50.0%
TCACACATCGAGTACACTCC+TGG - tig0018559:10721-10740 Msa1367840:intron 50.0%
GGTCTGTATATGAGTCCACC+AGG + tig0018559:10742-10761 Msa1367840:intergenic 50.0%
! GGTGGACTCATATACAGACC+AGG - tig0018559:10742-10761 Msa1367840:intron 50.0%
GGACTCATATACAGACCAGG+TGG - tig0018559:10745-10764 Msa1367840:intron 50.0%
CTTGTAGGAGCTATTGTGGG+AGG - tig0018559:11090-11109 Msa1367840:CDS 50.0%
ACTTGCTTGTGTCTGTTGGC+TGG - tig0018559:11377-11396 Msa1367840:five_prime_UTR 50.0%
CCGACAGATAAACGAGGGAG+AGG + tig0018559:5876-5895 Msa1388960:intergenic 55.0%
CACTTCTGTCTCTGGTCCTC+TGG + tig0018559:6310-6329 Msa1367840:intergenic 55.0%
CAGAGGACCAGAGACAGAAG+TGG - tig0018559:6308-6327 Msa1367840:CDS 55.0%
ACCAGAGACAGAAGTGGCGT+GGG - tig0018559:6314-6333 Msa1367840:CDS 55.0%
CAGAAGTGGCGTGGGAATTC+GGG - tig0018559:6322-6341 Msa1367840:CDS 55.0%
GTATACCCACGCGCCAAACA+TGG - tig0018559:8582-8601 Msa1367840:CDS 55.0%
CTCCCAACAGTTGTGGTCTG+AGG + tig0018559:8792-8811 Msa1367840:intergenic 55.0%
CAGACCACAACTGTTGGGAG+AGG - tig0018559:8792-8811 Msa1367840:intron 55.0%
TTGGGAGAGGCCAGAAGACA+TGG - tig0018559:8805-8824 Msa1367840:intron 55.0%
! CGCACTTGCTGCTTCTTCGA+TGG - tig0018559:8898-8917 Msa1367840:intron 55.0%
GCATTCCGATCATCGGATCC+CGG - tig0018559:8920-8939 Msa1367840:intron 55.0%
TATGGGGAGCCGCATGGTTA+AGG - tig0018559:10206-10225 Msa1367840:intron 55.0%
GGTTGGGACAACAAGCATGC+TGG - tig0018559:10313-10332 Msa1367840:intron 55.0%
AAAACAATTCGCCCCCCGTG+GGG - tig0018559:10447-10466 Msa1367840:intron 55.0%
GGCTCTTAACCTTGTGGTCG+TGG + tig0018559:10480-10499 Msa1367840:intergenic 55.0%
GCGCAAGGCTCTTAACCTTG+TGG + tig0018559:10486-10505 Msa1367840:intergenic 55.0%
!! AGCTCAGTTGGTAGAGCGCA+AGG + tig0018559:10501-10520 Msa1367840:intergenic 55.0%
! AACAGCCCGTCTAGCTCAGT+TGG + tig0018559:10513-10532 Msa1367840:intergenic 55.0%
GCATAGGAAGCTCTCTGCTG+AGG + tig0018559:10677-10696 Msa1367840:intergenic 55.0%
CACATCGAGTACACTCCTGG+TGG - tig0018559:10724-10743 Msa1367840:intron 55.0%
GACCAGAGACAGAAGTGGCG+TGG - tig0018559:6313-6332 Msa1367840:CDS 60.0%
TCCCACGCCACTTCTGTCTC+TGG + tig0018559:6318-6337 Msa1367840:intergenic 60.0%
CACTGCCATGTTTGGCGCGT+GGG + tig0018559:8590-8609 Msa1367840:intergenic 60.0%
ACACTGCCATGTTTGGCGCG+TGG + tig0018559:8591-8610 Msa1367840:intergenic 60.0%
CTGGCCTCTCCCAACAGTTG+TGG + tig0018559:8799-8818 Msa1367840:intergenic 60.0%
GCGACATCGGAAGCTGGGTT+AGG + tig0018559:8863-8882 Msa1367840:intergenic 60.0%
AACCCAGCTTCCGATGTCGC+CGG - tig0018559:8863-8882 Msa1367840:intron 60.0%
!! GGCTGTTTCTCCGGCGACAT+CGG + tig0018559:8876-8895 Msa1367840:intergenic 60.0%
!! AAGTGCGGCGGCTGTTTCTC+CGG + tig0018559:8885-8904 Msa1367840:intergenic 60.0%
CGAAGAAGCAGCAAGTGCGG+CGG + tig0018559:8897-8916 Msa1367840:intergenic 60.0%
GGGAGCCGCATGGTTAAGGA+GGG - tig0018559:10210-10229 Msa1367840:intron 60.0%
GGAGCTATTGTGGGAGGACC+TGG - tig0018559:11096-11115 Msa1367840:CDS 60.0%
ACCGGCGGTTACTACGACGC+CGG - tig0018559:6379-6398 Msa1367840:CDS 65.0%
ACCGGCGTCGTAGTAACCGC+CGG + tig0018559:6383-6402 Msa1367840:intergenic 65.0%
CTCCGGCGACATCGGAAGCT+GGG + tig0018559:8868-8887 Msa1367840:intergenic 65.0%
TCTCCGGCGACATCGGAAGC+TGG + tig0018559:8869-8888 Msa1367840:intergenic 65.0%
GGGGAGCCGCATGGTTAAGG+AGG - tig0018559:10209-10228 Msa1367840:intron 65.0%
GGCTCGAACCCACGACCACA+AGG - tig0018559:10468-10487 Msa1367840:intron 65.0%
TCGTGGGTTCGAGCCCCACG+GGG + tig0018559:10463-10482 Msa1367840:intergenic 70.0%
GTCGTGGGTTCGAGCCCCAC+GGG + tig0018559:10464-10483 Msa1367840:intergenic 70.0%
GGTCGTGGGTTCGAGCCCCA+CGG + tig0018559:10465-10484 Msa1367840:intergenic 70.0%
GTGGGTTCGAGCCCCACGGG+GGG + tig0018559:10461-10480 Msa1367840:intergenic 75.0%
CGTGGGTTCGAGCCCCACGG+GGG + tig0018559:10462-10481 Msa1367840:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0018559 gene 5841 11661 5841 ID=Msa1367840;Name=Msa1367840
tig0018559 mRNA 5841 11661 5841 ID=Msa1367840-mRNA-1;Parent=Msa1367840;Name=Msa1367840-mRNA-1;_AED=0.04;_eAED=0.04;_QI=322|1|1|1|1|1|4|434|491
tig0018559 exon 5841 6871 5841 ID=Msa1367840-mRNA-1:exon:167;Parent=Msa1367840-mRNA-1
tig0018559 exon 7145 7306 7145 ID=Msa1367840-mRNA-1:exon:166;Parent=Msa1367840-mRNA-1
tig0018559 exon 8427 8726 8427 ID=Msa1367840-mRNA-1:exon:165;Parent=Msa1367840-mRNA-1
tig0018559 exon 10923 11661 10923 ID=Msa1367840-mRNA-1:exon:164;Parent=Msa1367840-mRNA-1
tig0018559 five_prime_UTR 11340 11661 11340 ID=Msa1367840-mRNA-1:five_prime_utr;Parent=Msa1367840-mRNA-1
tig0018559 CDS 10923 11339 10923 ID=Msa1367840-mRNA-1:cds;Parent=Msa1367840-mRNA-1
tig0018559 CDS 8427 8726 8427 ID=Msa1367840-mRNA-1:cds;Parent=Msa1367840-mRNA-1
tig0018559 CDS 7145 7306 7145 ID=Msa1367840-mRNA-1:cds;Parent=Msa1367840-mRNA-1
tig0018559 CDS 6275 6871 6275 ID=Msa1367840-mRNA-1:cds;Parent=Msa1367840-mRNA-1
tig0018559 three_prime_UTR 5841 6274 5841 ID=Msa1367840-mRNA-1:three_prime_utr;Parent=Msa1367840-mRNA-1
Gene Sequence

>Msa1367840

ATGGCATTGGCCAGCAAATCGTTTTTGTTTGTTCTACTACTGGTGATGCTGATTGGAGGAAGAAGAAGTGTGAATGCACATGATTATGCGGAGGCATTATCGAAGGCAATCATGTTCTTTGAAGGACAACGTTCGGGGTTTTTACCAGAGGACCAGAGACAGAAGTGGCGTGGGAATTCGGGTTTGAGTGATGGGTGGACTTACAACACTGATCTTACCGGCGGTTACTACGACGCCGGTGATAACATCAAATTTGGGTTTCCGATGGCGTTTACGACAACAATGTTGTCGTGGAGTGTGATTGAGTTTGGTGAAAACATGCCTCCTAATGAACTCAGAAACGCTTTGGTCGCAATTCGTTGGAGTACTGATTATTTGCTTAAGACTGTTTCTCAGTCTAACCGCATTTTTGTTCAGGTGGGTGAACCAACCTCAGACCACAACTGTTGGGAGAGGCCAGAAGACATGGACACAAACAGGAAAGTGTATGCTGTTGATGCACCTAACCCAGCTTCCGATGTCGCCGGAGAAACAGCCGCCGCACTTGCTGCTTCTTCGATGGCATTCCGATCATCGGATCCCGGTTATTCTGAGACATTACTCAGAAATGCTGTTAAGGCATTTCAATATGCAGACAGTTACAGGGGCGCATACAGTGACAATGCTGATGTTAAGGATGGTGTCTGTCCTTATTATTGTGATTTTGATGGATACCAGGACGAATTGTTATGGGGAGCCGCATGGTTAAGGAGGGCTACTCAGGATGAAAATTTCCTAAACTACATTCAAAGCAATGGTAAAACACTCGGTGCTGAAGACAACATTAATGAGTTCGGTTGGGACAACAAGCATGCTGGCCTCAACGTTCTTGTCTCCAAGGAAGTCCTAGAAGGAAATGTTGAATCTCTTGAATCTTACAAGACCTCAGCAGAGAGCTTCCTATGCACACTACTACCTGAAACATCAAGTTCACACATCGAGTACACTCCTGGTGGACTCATATACAGACCAGGTGGAAGCAACTTACAACATGCAACTTCAATTGCTTTCCTTGAGTTAGTCTACGCCAATTACTTATTTCGCACGTCACAAACCATCAATTGTGGCAATGTTTATGTTAGTGCACAAACACTTCGGGAGCGTGCCAAGAGACAAGTTGATTACATTTTAGGTGATAACCCCTTGGGTTTATCTTACATGGTTGGTTATGGTAACAATTATCCACAACGTATTCATCATCGTGGCTCATCTCTACCTTCTATTAAGGACCATCCTCAACAGATTGCTTGCAAGGAAGGTTCAATATACTTCAATTCAACAAATCCTAACCCAAATGTTCTTGTAGGAGCTATTGTGGGAGGACCTGGAGAAGATGATGTTTATGTGGATGACAGGGCTGATTATAGAAAATCTGAGCCAACCACATATATTAATGCGCCATTTGTTGGGGTTTTAGCATATTTTGTTGCTAATTAA
Protein sequence

>Msa1367840

MALASKSFLFVLLLVMLIGGRRSVNAHDYAEALSKAIMFFEGQRSGFLPEDQRQKWRGNSGLSDGWTYNTDLTGGYYDAGDNIKFGFPMAFTTTMLSWSVIEFGENMPPNELRNALVAIRWSTDYLLKTVSQSNRIFVQVGEPTSDHNCWERPEDMDTNRKVYAVDAPNPASDVAGETAAALAASSMAFRSSDPGYSETLLRNAVKAFQYADSYRGAYSDNADVKDGVCPYYCDFDGYQDELLWGAAWLRRATQDENFLNYIQSNGKTLGAEDNINEFGWDNKHAGLNVLVSKEVLEGNVESLESYKTSAESFLCTLLPETSSSHIEYTPGGLIYRPGGSNLQHATSIAFLELVYANYLFRTSQTINCGNVYVSAQTLRERAKRQVDYILGDNPLGLSYMVGYGNNYPQRIHHRGSSLPSIKDHPQQIACKEGSIYFNSTNPNPNVLVGAIVGGPGEDDVYVDDRADYRKSEPTTYINAPFVGVLAYFVAN*