AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1386010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1386010 MtrunA17_Chr2g0281981 99.042 313 3 0 1 313 1 313 0.0 634
Msa1386010 MtrunA17_Chr4g0047571 71.523 302 73 5 21 313 9 306 1.02e-132 379
Msa1386010 MtrunA17_Chr8g0387061 54.286 315 116 9 8 313 31 326 1.23e-80 248
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1386010 AT2G20760.1 56.209 306 106 8 21 313 27 317 8.06e-79 243
Msa1386010 AT2G40060.1 53.509 228 76 4 30 251 25 228 2.31e-70 219
Msa1386010 AT3G51890.1 66.038 159 51 1 101 259 85 240 2.63e-62 198

Find 127 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGTCGCAGAGGCTTCTTTC+TGG 0.092482 tig0020780:+59413 None:intergenic
TCTTTCTGGGGTTCCTCTGC+TGG 0.195125 tig0020780:+59427 None:intergenic
CATTGTAGTACCTGCATTAA+AGG 0.217820 tig0020780:-59262 Msa1386010:three_prime_UTR
GTTTGCCGGGCTTAGGGCCT+TGG 0.222402 tig0020780:+59647 None:intergenic
TATTAGTTCCTAATGCTTAT+TGG 0.271513 tig0020780:-59288 Msa1386010:three_prime_UTR
GAAACATCATCTAAAGTAAC+TGG 0.273669 tig0020780:-59505 Msa1386010:CDS
TGAACACTGCATGTGCAAAA+AGG 0.289159 tig0020780:+59330 None:intergenic
GGTGACATCGCCGTCGAAAT+TGG 0.302399 tig0020780:+62769 None:intergenic
AAGAGGCAGACAAAGCTTAT+TGG 0.306471 tig0020780:-59765 Msa1386010:CDS
CGACCTTTATAGGCATGTTT+TGG 0.312515 tig0020780:-59052 Msa1386010:three_prime_UTR
TGAGGAGGCTGAGGAGTATA+AGG 0.315912 tig0020780:-59984 Msa1386010:CDS
GGTCGCAGAGGCTTCTTTCT+GGG 0.316434 tig0020780:+59414 None:intergenic
GGAAAGATCTGTGGGTTTGC+CGG 0.324935 tig0020780:+59633 None:intergenic
ACATGTAGATTCAGTGTTCA+TGG 0.339439 tig0020780:-59205 Msa1386010:three_prime_UTR
TTCCTCTGCTGGGCCGTTAG+AGG 0.340463 tig0020780:+59438 None:intergenic
CACAAGTAATCGACCTTTAT+AGG 0.345031 tig0020780:-59062 Msa1386010:three_prime_UTR
AACGATAACGGAAACGGTTA+TGG 0.352071 tig0020780:-62638 Msa1386010:CDS
CTCCTTCTCCTCTAGCTCAA+TGG 0.361178 tig0020780:+60039 None:intergenic
TCTGTGGGTTTGCCGGGCTT+AGG 0.365337 tig0020780:+59640 None:intergenic
AGCTAGAGGAGAAGGAGAAA+AGG 0.369546 tig0020780:-60033 Msa1386010:CDS
CGACCAAAACATGCCTATAA+AGG 0.369990 tig0020780:+59049 None:intergenic
ATTGGAGTAACCACCGTAAC+CGG 0.372444 tig0020780:+62787 None:intergenic
CTGTGGGTTTGCCGGGCTTA+GGG 0.379243 tig0020780:+59641 None:intergenic
CCGTTAGAGGCCACATCCTT+TGG 0.394016 tig0020780:+59451 None:intergenic
CTTTCTGGGGTTCCTCTGCT+GGG 0.395967 tig0020780:+59428 None:intergenic
CTCTCCTTCTCCGTTTGAAT+CGG 0.398479 tig0020780:-62678 Msa1386010:CDS
GCAAACCCACAGATCTTTCC+AGG 0.408467 tig0020780:-59630 Msa1386010:CDS
TGTTTCTCTCTCTAGAAATT+CGG 0.411241 tig0020780:+62911 None:intergenic
GAAAGATCTGTGGGTTTGCC+GGG 0.421847 tig0020780:+59634 None:intergenic
GAATCGGTTACTGTAGAAAA+CGG 0.424815 tig0020780:-62662 Msa1386010:CDS
AATGTGCTAATGGCTTTGTT+TGG 0.424986 tig0020780:+62958 None:intergenic
CAATGCAACCAATAAGCATT+AGG 0.426186 tig0020780:+59280 None:intergenic
TGACACTTGGAAAATATATC+AGG 0.433473 tig0020780:+59128 None:intergenic
GATCAAGACGACACCTTCTC+CGG 0.433643 tig0020780:-62806 Msa1386010:CDS
GCTAGAGGAGAAGGAGAAAA+GGG 0.438393 tig0020780:-60032 Msa1386010:CDS
GACGACACCTTCTCCGGTTA+CGG 0.443450 tig0020780:-62800 Msa1386010:CDS
TTCATTAAAACCTTTAATGC+AGG 0.445948 tig0020780:+59252 None:intergenic
TCAGCAGCTGAAGGTGCATC+AGG 0.447568 tig0020780:-59481 Msa1386010:CDS
CTTGTGTTATAGACAATGAC+TGG 0.454759 tig0020780:+59079 None:intergenic
GAAGATTATTGAGGAGGCTG+AGG 0.457014 tig0020780:-59993 Msa1386010:CDS
TCTTTAGCAGGAGCAGGTGG+TGG 0.458003 tig0020780:+59553 None:intergenic
AATGAAATGAAATGTGCTAA+TGG 0.463790 tig0020780:+62948 None:intergenic
TAGCAGTATTTGTCGCATCC+TGG 0.466048 tig0020780:+59612 None:intergenic
AATCGGTTACTGTAGAAAAC+GGG 0.471773 tig0020780:-62661 Msa1386010:CDS
ACAAGGTTCAAAATAGAGAA+AGG 0.472036 tig0020780:-59922 Msa1386010:CDS
CCTTCCTCCACCTGGTGAGA+TGG 0.476417 tig0020780:-62579 Msa1386010:CDS
AGAAGGAGAGTAACCAGGAT+TGG 0.477559 tig0020780:+62691 None:intergenic
GCGTCTTTAGCATCTTTAGC+AGG 0.478410 tig0020780:+59541 None:intergenic
TTAGCATCTTTAGCAGGAGC+AGG 0.482630 tig0020780:+59547 None:intergenic
GAAGGAGAGTAACCAGGATT+GGG 0.484433 tig0020780:+62692 None:intergenic
GTAGAAAACGGGAACGATAA+CGG 0.485632 tig0020780:-62650 Msa1386010:CDS
GGTCCGATCCTTCCTCCACC+TGG 0.491267 tig0020780:-62587 Msa1386010:CDS
AGGTGGCTTTCTATGAGAAA+AGG 0.491336 tig0020780:-59964 Msa1386010:CDS
AATGCGATTGAAGATTATTG+AGG 0.496048 tig0020780:-60002 Msa1386010:CDS
CTTTAGCAGGAGCAGGTGGT+GGG 0.504213 tig0020780:+59554 None:intergenic
TTAGCAGGAGCAGGTGGTGG+GGG 0.510264 tig0020780:+59556 None:intergenic
GTCGCAGAGGCTTCTTTCTG+GGG 0.515607 tig0020780:+59415 None:intergenic
TGCCATTGAGCTAGAGGAGA+AGG 0.516040 tig0020780:-60041 Msa1386010:CDS
GGATTCAGTGATCCCAATCC+TGG 0.519749 tig0020780:-62704 Msa1386010:CDS
GTTGTCCAAGGCCCTAAGCC+CGG 0.522136 tig0020780:-59652 Msa1386010:CDS
CAAGGTTCAAAATAGAGAAA+GGG 0.525223 tig0020780:-59921 Msa1386010:CDS
AAGGTTACGCTCTTCGTGAA+TGG 0.527926 tig0020780:-62547 Msa1386010:CDS
TCACTGAATCCGTAGATCTC+CGG 0.530021 tig0020780:+62716 None:intergenic
ACGAGGCAAAATTATGCAGC+AGG 0.532050 tig0020780:+59382 None:intergenic
GTCGTCAGTGAAAGCGTCGA+AGG 0.533146 tig0020780:+62871 None:intergenic
TCTACAGTAACCGATTCAAA+CGG 0.534276 tig0020780:+62668 None:intergenic
CCTTGGACAACAGTGATTGA+CGG 0.539024 tig0020780:+59664 None:intergenic
TCGCATCCTGGAAAGATCTG+TGG 0.539524 tig0020780:+59624 None:intergenic
GAAAGAAGCCTCTGCGACCG+AGG 0.541513 tig0020780:-59410 Msa1386010:CDS
CGCATCCTGGAAAGATCTGT+GGG 0.542779 tig0020780:+59625 None:intergenic
GAACTTATTAAGAGGGAAGC+TGG 0.544539 tig0020780:-59027 Msa1386010:three_prime_UTR
GGAGAAGGTGTCGTCTTGAT+CGG 0.546309 tig0020780:+62808 None:intergenic
TCAAGAGAAGTTTCACAAAG+AGG 0.547541 tig0020780:-59782 Msa1386010:CDS
AATGGAGACTCAGCAACTCA+TGG 0.549948 tig0020780:+59003 None:intergenic
GACGTGAAGTTCAGTGCTGT+TGG 0.550763 tig0020780:+62980 None:intergenic
TTTAGCAGGAGCAGGTGGTG+GGG 0.553305 tig0020780:+59555 None:intergenic
ACGCTCTTCGTGAATGGCGC+CGG 0.553734 tig0020780:-62541 Msa1386010:intron
AACGGGAACGATAACGGAAA+CGG 0.554690 tig0020780:-62644 Msa1386010:CDS
CCAAAGGATGTGGCCTCTAA+CGG 0.555585 tig0020780:-59451 Msa1386010:CDS
CCATCTCACCAGGTGGAGGA+AGG 0.556654 tig0020780:+62579 None:intergenic
GACTCCATCTCACCAGGTGG+AGG 0.561037 tig0020780:+62575 None:intergenic
CGCCGCTGAAACTACTTCAC+CGG 0.562245 tig0020780:-62735 Msa1386010:CDS
GATGCTAAAGACGCAAAGGA+TGG 0.566024 tig0020780:-59532 Msa1386010:CDS
TCAAAATAGAGAAAGGGAGA+AGG 0.567942 tig0020780:-59915 Msa1386010:intron
GGCAAAATTATGCAGCAGGT+TGG 0.569456 tig0020780:+59386 None:intergenic
TCAAAATGCCATTGAGCTAG+AGG 0.570686 tig0020780:-60047 Msa1386010:CDS
CCGTCAATCACTGTTGTCCA+AGG 0.577884 tig0020780:-59664 Msa1386010:CDS
ACTACTTCACCGGAGATCTA+CGG 0.578559 tig0020780:-62725 Msa1386010:CDS
GGTGAGATGGAGTCGGAGGA+AGG 0.580041 tig0020780:-62566 Msa1386010:CDS
GGTGGTTACTCCAATTTCGA+CGG 0.586145 tig0020780:-62779 Msa1386010:CDS
GCATCTTTAGCAGGAGCAGG+TGG 0.590565 tig0020780:+59550 None:intergenic
TTTGGTCGAACTTATTAAGA+GGG 0.591202 tig0020780:-59034 Msa1386010:three_prime_UTR
TCAATGTTGGCAACCTCACG+AGG 0.591611 tig0020780:+59721 None:intergenic
AGGTTGCCAACATTGAAAAG+AGG 0.596082 tig0020780:-59714 Msa1386010:CDS
GGTGTCGTCTTGATCGGAGG+CGG 0.596468 tig0020780:+62814 None:intergenic
TCACCAGGTGGAGGAAGGAT+CGG 0.597105 tig0020780:+62584 None:intergenic
GCAGTGTTCAATGAATCTCT+TGG 0.598486 tig0020780:-59317 Msa1386010:three_prime_UTR
GGCCTCTAACGGCCCAGCAG+AGG 0.599204 tig0020780:-59440 Msa1386010:CDS
AGGATCACAACCAAAGGATG+TGG 0.599390 tig0020780:-59461 Msa1386010:CDS
TCAGACAAATGATTGAGAGA+AGG 0.599585 tig0020780:+59357 None:intergenic
TGCAGAGCTCATTCCTCGTG+AGG 0.599727 tig0020780:-59734 Msa1386010:CDS
GCGATTGAAGATTATTGAGG+AGG 0.599831 tig0020780:-59999 Msa1386010:CDS
TCGGAGGCGGCGAAGTTGTG+AGG 0.600626 tig0020780:+62827 None:intergenic
GTAACCACCGTAACCGGAGA+AGG 0.602987 tig0020780:+62793 None:intergenic
TCCTCCGACTCCATCTCACC+AGG 0.604179 tig0020780:+62569 None:intergenic
GTAACTGGGTCAGCAGCTGA+AGG 0.610261 tig0020780:-59490 Msa1386010:CDS
TGCATCAGGATCACAACCAA+AGG 0.610972 tig0020780:-59467 Msa1386010:CDS
TCCACCTGGTGAGATGGAGT+CGG 0.612364 tig0020780:-62573 Msa1386010:CDS
ACCTGGTGAGATGGAGTCGG+AGG 0.613781 tig0020780:-62570 Msa1386010:CDS
GACACCTTCTCCGGTTACGG+TGG 0.615312 tig0020780:-62797 Msa1386010:CDS
TAAAGATGCTAAAGACGCAA+AGG 0.617813 tig0020780:-59536 Msa1386010:CDS
TTATGCAGCAGGTTGGTCCT+CGG 0.620437 tig0020780:+59393 None:intergenic
GAAGGTGTCGTCTTGATCGG+AGG 0.622038 tig0020780:+62811 None:intergenic
CTCCGGTGAAGTAGTTTCAG+CGG 0.641225 tig0020780:+62733 None:intergenic
AACGGAGAAGGAGAGTAACC+AGG 0.644232 tig0020780:+62686 None:intergenic
TCCGACTCCATCTCACCAGG+TGG 0.644893 tig0020780:+62572 None:intergenic
TTCAGCGGCGGAGTGATCGA+CGG 0.648198 tig0020780:+62748 None:intergenic
GCCAACATTGAAAAGAGGAG+AGG 0.649076 tig0020780:-59709 Msa1386010:CDS
AGGTTGGTCCTCGGTCGCAG+AGG 0.650661 tig0020780:+59402 None:intergenic
TTGTGTTATAGACAATGACT+GGG 0.658073 tig0020780:+59080 None:intergenic
CGGTGAAGTAGTTTCAGCGG+CGG 0.659180 tig0020780:+62736 None:intergenic
AAACATCATCTAAAGTAACT+GGG 0.661612 tig0020780:-59504 Msa1386010:CDS
GCTTAATGTTGAGACTAACA+AGG 0.677288 tig0020780:-59939 Msa1386010:CDS
GTAACCGATTCAAACGGAGA+AGG 0.683900 tig0020780:+62674 None:intergenic
GGAGGCTGAGGAGTATAAGG+TGG 0.692623 tig0020780:-59981 Msa1386010:CDS
ATGATTGAGAGAAGGAAACG+AGG 0.694344 tig0020780:+59365 None:intergenic
AACGGTTATGGTGATGATGA+CGG 0.705580 tig0020780:-62626 Msa1386010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATTGATATTTTACTTA+TGG - tig0020780:59848-59867 Msa1386010:intron 10.0%
!!! TTTTTAGAAAAAATAGATTT+TGG - tig0020780:60389-60408 Msa1386010:intron 10.0%
!!! GTTCAAATTAAACATTTTTT+AGG - tig0020780:60026-60045 Msa1386010:CDS 15.0%
!!! ATATTTAAGGTAACATTATT+GGG - tig0020780:60151-60170 Msa1386010:intron 15.0%
!!! ATCTATTTTTTCTAAAAACA+AGG + tig0020780:60387-60406 None:intergenic 15.0%
!!! GTTTTTATAATAGATAATCA+TGG - tig0020780:60589-60608 Msa1386010:intron 15.0%
!!! TGGATTTAACTTAATAATAA+AGG - tig0020780:61038-61057 Msa1386010:intron 15.0%
!!! GGATTTAACTTAATAATAAA+GGG - tig0020780:61039-61058 Msa1386010:intron 15.0%
!!! AAATTCATTTTTTTAACCAT+AGG + tig0020780:61271-61290 None:intergenic 15.0%
!! AAATATTTATATTAATGGCA+AGG - tig0020780:61378-61397 Msa1386010:intron 15.0%
!! TATAAATTGAAATTTGTCTA+TGG - tig0020780:62169-62188 Msa1386010:intron 15.0%
!! AGTAATTAGGATTATGAATT+AGG - tig0020780:59581-59600 Msa1386010:CDS 20.0%
!! AATTAGTAAAATTCTATGCT+AGG - tig0020780:59749-59768 Msa1386010:CDS 20.0%
!! ATTAGTAAAATTCTATGCTA+GGG - tig0020780:59750-59769 Msa1386010:CDS 20.0%
!! TTGAATTTGTAATATGAAAG+AGG - tig0020780:59825-59844 Msa1386010:intron 20.0%
!!! TGATATTTTACTTATGGTAA+TGG - tig0020780:59854-59873 Msa1386010:intron 20.0%
!!! TAATTTGTATGTTAACCAAA+GGG - tig0020780:60082-60101 Msa1386010:intron 20.0%
!!! CATATTTAAGGTAACATTAT+TGG - tig0020780:60150-60169 Msa1386010:intron 20.0%
!!! AGTAATAACTTTTCATTTTG+AGG - tig0020780:60422-60441 Msa1386010:intron 20.0%
!! CACTATTAGAATAATAAAAG+TGG - tig0020780:60494-60513 Msa1386010:intron 20.0%
!!! GAATAATAAAAGTGGTTTTT+TGG - tig0020780:60502-60521 Msa1386010:intron 20.0%
!!! AAAAAAGCATTGATCTTATA+TGG - tig0020780:61115-61134 Msa1386010:intron 20.0%
!! AAAATTGACTAGAAATAGTA+GGG + tig0020780:61182-61201 None:intergenic 20.0%
!! TACATAAAAAATTGATCACA+CGG + tig0020780:61314-61333 None:intergenic 20.0%
!! CAAGTAACAATACAAAAATT+AGG - tig0020780:61338-61357 Msa1386010:intron 20.0%
!!! GAAACATTTATGTATTTTGT+TGG - tig0020780:61415-61434 Msa1386010:intron 20.0%
!!! CTATTATTTTAGGTTGTAAT+AGG + tig0020780:61506-61525 None:intergenic 20.0%
!! CTATTACAACCTAAAATAAT+AGG - tig0020780:61504-61523 Msa1386010:intron 20.0%
!! TAACAGGAATTTATAACAAT+AGG + tig0020780:61569-61588 None:intergenic 20.0%
!! TATAAATTCCTGTTACAATA+AGG - tig0020780:61574-61593 Msa1386010:intron 20.0%
!! ATAAATTCCTGTTACAATAA+GGG - tig0020780:61575-61594 Msa1386010:intron 20.0%
!! ATCCATTATGTGTTTATTAT+GGG - tig0020780:61606-61625 Msa1386010:intron 20.0%
!!! ATTACCAGCATTAAATTTTT+TGG + tig0020780:61761-61780 None:intergenic 20.0%
!!! TTTTAGTCCAATAAAGATTT+AGG - tig0020780:61857-61876 Msa1386010:intron 20.0%
!! AAAAAGATAAATCAAAATGC+TGG + tig0020780:62113-62132 None:intergenic 20.0%
! AATGAAATGAAATGTGCTAA+TGG + tig0020780:59048-59067 None:intergenic 25.0%
! AACTTCATAATCGAATTTCT+AGG + tig0020780:59545-59564 None:intergenic 25.0%
!!! TTCGATTATGAAGTTTTTTG+CGG - tig0020780:59550-59569 Msa1386010:CDS 25.0%
!!! AGGAATTGATTTGTATATAC+TGG - tig0020780:59773-59792 Msa1386010:CDS 25.0%
! TGTTACATGTAGAAAAATCT+CGG - tig0020780:60004-60023 Msa1386010:CDS 25.0%
!! GTAATTTGTATGTTAACCAA+AGG - tig0020780:60081-60100 Msa1386010:intron 25.0%
! TCTAGCAATTTACAAAAAAC+TGG - tig0020780:60207-60226 Msa1386010:intron 25.0%
! CTAGCAATTTACAAAAAACT+GGG - tig0020780:60208-60227 Msa1386010:intron 25.0%
! ATTTAAGAAATGTGTTCAAG+AGG + tig0020780:60267-60286 None:intergenic 25.0%
! TATCTATTATAAAAACCCAC+TGG + tig0020780:60585-60604 None:intergenic 25.0%
!! ATTTAGGGAAAGTATAAACA+TGG + tig0020780:60833-60852 None:intergenic 25.0%
!! TAAAACAGACAAGGTATTTA+GGG + tig0020780:60848-60867 None:intergenic 25.0%
!! TCTGTTTTACATTGAGATAA+AGG - tig0020780:60859-60878 Msa1386010:intron 25.0%
!! CTGTTTTACATTGAGATAAA+GGG - tig0020780:60860-60879 Msa1386010:intron 25.0%
!!! CTTAATAATAAAGGGTGTTT+CGG - tig0020780:61047-61066 Msa1386010:intron 25.0%
! GAAAATTGACTAGAAATAGT+AGG + tig0020780:61183-61202 None:intergenic 25.0%
!!! GTGTGATCAATTTTTTATGT+AGG - tig0020780:61313-61332 Msa1386010:intron 25.0%
!! GAACTCTAAACATTTTATCT+AGG + tig0020780:61443-61462 None:intergenic 25.0%
! GATCCATTATGTGTTTATTA+TGG - tig0020780:61605-61624 Msa1386010:intron 25.0%
! AATTATCTTGTATTTGCAAG+AGG - tig0020780:61630-61649 Msa1386010:intron 25.0%
! AATAGCTCCTAAATCTTTAT+TGG + tig0020780:61867-61886 None:intergenic 25.0%
!! AAACATCATCTAAAGTAACT+GGG - tig0020780:62489-62508 Msa1386010:intron 25.0%
! TATTAGTTCCTAATGCTTAT+TGG - tig0020780:62705-62724 Msa1386010:CDS 25.0%
! TTCATTAAAACCTTTAATGC+AGG + tig0020780:62744-62763 None:intergenic 25.0%
! TGTTTCTCTCTCTAGAAATT+CGG + tig0020780:59085-59104 None:intergenic 30.0%
TCCAACAAAATTCAACTTAC+CGG + tig0020780:59474-59493 None:intergenic 30.0%
! TGCGGTTTTTGTAAGTAATT+AGG - tig0020780:59568-59587 Msa1386010:CDS 30.0%
!! TTACTTATGGTAATGGAAGT+TGG - tig0020780:59861-59880 Msa1386010:intron 30.0%
TTGCACTTAGATTTCAATCT+TGG - tig0020780:59944-59963 Msa1386010:CDS 30.0%
! AAGGTAACATTATTGGGTTT+TGG - tig0020780:60157-60176 Msa1386010:intron 30.0%
GGTCATAATAAATCTTGATG+AGG - tig0020780:60229-60248 Msa1386010:intron 30.0%
TAAATTACATCAGAGGAAGA+GGG + tig0020780:60654-60673 None:intergenic 30.0%
ATTTACAGAGCGATAGATAT+TGG - tig0020780:60669-60688 Msa1386010:intron 30.0%
TGTTACTAGATGTTATAAGC+AGG - tig0020780:60776-60795 Msa1386010:intron 30.0%
! GAAAGTATAAACATGGATAG+GGG + tig0020780:60826-60845 None:intergenic 30.0%
! GGAAAGTATAAACATGGATA+GGG + tig0020780:60827-60846 None:intergenic 30.0%
! GTAAAACAGACAAGGTATTT+AGG + tig0020780:60849-60868 None:intergenic 30.0%
ATCTCAATGTAAAACAGACA+AGG + tig0020780:60857-60876 None:intergenic 30.0%
CATAAAGATCGTGTTGAAAA+AGG + tig0020780:60931-60950 None:intergenic 30.0%
!!! CTTTTTCAACACGATCTTTA+TGG - tig0020780:60929-60948 Msa1386010:intron 30.0%
ATAGTTTAATGAGACTTGCA+TGG - tig0020780:61018-61037 Msa1386010:intron 30.0%
AATAGTGTGTTGAAGATTGT+TGG - tig0020780:61070-61089 Msa1386010:intron 30.0%
!! TCGCATTGACCTATTATTTT+AGG + tig0020780:61516-61535 None:intergenic 30.0%
TGCCCATAATAAACACATAA+TGG + tig0020780:61611-61630 None:intergenic 30.0%
TTTGAACCAGTGATTTCATA+CGG - tig0020780:61665-61684 Msa1386010:intron 30.0%
TGAGCCAAAAAATTTAATGC+TGG - tig0020780:61754-61773 Msa1386010:intron 30.0%
CCTCTAATAACTTTACAAAC+AGG + tig0020780:61792-61811 None:intergenic 30.0%
CCTGTTTGTAAAGTTATTAG+AGG - tig0020780:61789-61808 Msa1386010:intron 30.0%
AATGCGATTGAAGATTATTG+AGG - tig0020780:61991-62010 Msa1386010:intron 30.0%
ACAAGGTTCAAAATAGAGAA+AGG - tig0020780:62071-62090 Msa1386010:intron 30.0%
CAAGGTTCAAAATAGAGAAA+GGG - tig0020780:62072-62091 Msa1386010:intron 30.0%
! GAAACATCATCTAAAGTAAC+TGG - tig0020780:62488-62507 Msa1386010:intron 30.0%
TGACACTTGGAAAATATATC+AGG + tig0020780:62868-62887 None:intergenic 30.0%
CCAATAGAAAAATTGACACT+TGG + tig0020780:62881-62900 None:intergenic 30.0%
! CCAAGTGTCAATTTTTCTAT+TGG - tig0020780:62878-62897 Msa1386010:CDS 30.0%
TTGTGTTATAGACAATGACT+GGG + tig0020780:62916-62935 None:intergenic 30.0%
! TTTTGGTCGAACTTATTAAG+AGG - tig0020780:62958-62977 Msa1386010:five_prime_UTR 30.0%
TTTGGTCGAACTTATTAAGA+GGG - tig0020780:62959-62978 Msa1386010:five_prime_UTR 30.0%
!! AATGTGCTAATGGCTTTGTT+TGG + tig0020780:59038-59057 None:intergenic 35.0%
! TCTACAGTAACCGATTCAAA+CGG + tig0020780:59328-59347 None:intergenic 35.0%
GAATCGGTTACTGTAGAAAA+CGG - tig0020780:59331-59350 Msa1386010:three_prime_UTR 35.0%
AATCGGTTACTGTAGAAAAC+GGG - tig0020780:59332-59351 Msa1386010:three_prime_UTR 35.0%
! TGCTATTGCGATTTTACTTG+TGG - tig0020780:59679-59698 Msa1386010:CDS 35.0%
AGTAAAATTCTATGCTAGGG+AGG - tig0020780:59753-59772 Msa1386010:CDS 35.0%
!! ACTGGTATCAAGAGTATCTT+TGG - tig0020780:59791-59810 Msa1386010:CDS 35.0%
!! CTGGTATCAAGAGTATCTTT+GGG - tig0020780:59792-59811 Msa1386010:CDS 35.0%
ATTCGTTAGGGTAAATTCCA+TGG - tig0020780:59898-59917 Msa1386010:intron 35.0%
CTACATGTAACAATCGAACT+CGG + tig0020780:59996-60015 None:intergenic 35.0%
GGATTGGATGGTCATATTTA+AGG - tig0020780:60138-60157 Msa1386010:intron 35.0%
!! TTCCGAGTTCTCTAAGATTT+AGG - tig0020780:60323-60342 Msa1386010:intron 35.0%
!! TCCGAGTTCTCTAAGATTTA+GGG - tig0020780:60324-60343 Msa1386010:intron 35.0%
ACCCTAAATCTTAGAGAACT+CGG + tig0020780:60328-60347 None:intergenic 35.0%
! GACTAAGGGTTCATTTGTTT+TGG + tig0020780:60563-60582 None:intergenic 35.0%
ATAAAAACCCACTGGACTAA+GGG + tig0020780:60577-60596 None:intergenic 35.0%
TATAAAAACCCACTGGACTA+AGG + tig0020780:60578-60597 None:intergenic 35.0%
GTAAATTACATCAGAGGAAG+AGG + tig0020780:60655-60674 None:intergenic 35.0%
CGATAGATATTGGACAAATC+TGG - tig0020780:60679-60698 Msa1386010:intron 35.0%
ATGTTATAAGCAGGTCTTCA+TGG - tig0020780:60785-60804 Msa1386010:intron 35.0%
! GGGAAAGTATAAACATGGAT+AGG + tig0020780:60828-60847 None:intergenic 35.0%
CTCACTGTATAAATCGTGAA+GGG + tig0020780:60891-60910 None:intergenic 35.0%
TCTCACTGTATAAATCGTGA+AGG + tig0020780:60892-60911 None:intergenic 35.0%
TCAACACGATCTTTATGGTT+AGG - tig0020780:60934-60953 Msa1386010:intron 35.0%
CAACACGATCTTTATGGTTA+GGG - tig0020780:60935-60954 Msa1386010:intron 35.0%
AACACGATCTTTATGGTTAG+GGG - tig0020780:60936-60955 Msa1386010:intron 35.0%
ATCAAACAGATGAGCAATCA+TGG + tig0020780:61205-61224 None:intergenic 35.0%
AGTCATAGCATAGTTAACGT+AGG - tig0020780:61539-61558 Msa1386010:intron 35.0%
GTCATAGCATAGTTAACGTA+GGG - tig0020780:61540-61559 Msa1386010:intron 35.0%
CATGACACAATGAATGTCTT+TGG - tig0020780:61909-61928 Msa1386010:intron 35.0%
!!! AATGGCATTTTGACTGTACA+AGG + tig0020780:61939-61958 None:intergenic 35.0%
GCTTAATGTTGAGACTAACA+AGG - tig0020780:62054-62073 Msa1386010:intron 35.0%
TCAAAATAGAGAAAGGGAGA+AGG - tig0020780:62078-62097 Msa1386010:intron 35.0%
TCAAGAGAAGTTTCACAAAG+AGG - tig0020780:62211-62230 Msa1386010:intron 35.0%
TAAAGATGCTAAAGACGCAA+AGG - tig0020780:62457-62476 Msa1386010:intron 35.0%
TCAGACAAATGATTGAGAGA+AGG + tig0020780:62639-62658 None:intergenic 35.0%
CAATGCAACCAATAAGCATT+AGG + tig0020780:62716-62735 None:intergenic 35.0%
CATTGTAGTACCTGCATTAA+AGG - tig0020780:62731-62750 Msa1386010:CDS 35.0%
ACATGTAGATTCAGTGTTCA+TGG - tig0020780:62788-62807 Msa1386010:CDS 35.0%
!!! TCATGAGATTGCTGACTTTT+TGG - tig0020780:62840-62859 Msa1386010:CDS 35.0%
!!! CATGAGATTGCTGACTTTTT+GGG - tig0020780:62841-62860 Msa1386010:CDS 35.0%
CTTGTGTTATAGACAATGAC+TGG + tig0020780:62917-62936 None:intergenic 35.0%
CACAAGTAATCGACCTTTAT+AGG - tig0020780:62931-62950 Msa1386010:five_prime_UTR 35.0%
GTAGAAAACGGGAACGATAA+CGG - tig0020780:59343-59362 Msa1386010:three_prime_UTR 40.0%
!! AACGATAACGGAAACGGTTA+TGG - tig0020780:59355-59374 Msa1386010:three_prime_UTR 40.0%
! AACGGTTATGGTGATGATGA+CGG - tig0020780:59367-59386 Msa1386010:three_prime_UTR 40.0%
!!! GACGGTGTTTTTGTTTCTGA+TGG - tig0020780:59385-59404 Msa1386010:exon 40.0%
!! GCCGGTAAGTTGAATTTTGT+TGG - tig0020780:59470-59489 Msa1386010:CDS 40.0%
!! GTATCAAGAGTATCTTTGGG+TGG - tig0020780:59795-59814 Msa1386010:CDS 40.0%
! CCATAATCTTTTCTGTGCCA+TGG + tig0020780:59918-59937 None:intergenic 40.0%
CCATGGCACAGAAAAGATTA+TGG - tig0020780:59915-59934 Msa1386010:intron 40.0%
TGGCACAGAAAAGATTATGG+TGG - tig0020780:59918-59937 Msa1386010:CDS 40.0%
GCGTGTACTGTTCACTTTAT+TGG - tig0020780:60055-60074 Msa1386010:intron 40.0%
CAATCCAGCTTCAAATAGCA+AGG + tig0020780:60124-60143 None:intergenic 40.0%
!! CTTGCTATTTGAAGCTGGAT+TGG - tig0020780:60122-60141 Msa1386010:intron 40.0%
! CTATTTGAAGCTGGATTGGA+TGG - tig0020780:60126-60145 Msa1386010:intron 40.0%
AGACAGATCCAAGTTCAACA+GGG + tig0020780:60190-60209 None:intergenic 40.0%
TAGACAGATCCAAGTTCAAC+AGG + tig0020780:60191-60210 None:intergenic 40.0%
AAATGAACCCTTAGTCCAGT+GGG - tig0020780:60567-60586 Msa1386010:intron 40.0%
CGCTCTGTAAATTACATCAG+AGG + tig0020780:60661-60680 None:intergenic 40.0%
GATAGGGGAGGAATATGTTA+GGG + tig0020780:60811-60830 None:intergenic 40.0%
AGTATAAACATGGATAGGGG+AGG + tig0020780:60823-60842 None:intergenic 40.0%
TTCTTGAGTTTCCCTGGATA+AGG - tig0020780:60962-60981 Msa1386010:intron 40.0%
!! GGTAAAGTGTTGTGACTGTA+AGG + tig0020780:61161-61180 None:intergenic 40.0%
TTAACCATAGGACAGTTGCT+CGG + tig0020780:61259-61278 None:intergenic 40.0%
TGGCAAGGTTCATGCTTATT+AGG - tig0020780:61393-61412 Msa1386010:intron 40.0%
! CTGTTACAATAAGGGAGCAT+GGG - tig0020780:61583-61602 Msa1386010:intron 40.0%
ACTAGTGTGAAGAGAAGCTT+TGG + tig0020780:61711-61730 None:intergenic 40.0%
!!! GCATTTTGACTGTACAAGGA+AGG + tig0020780:61935-61954 None:intergenic 40.0%
TCAAAATGCCATTGAGCTAG+AGG - tig0020780:61946-61965 Msa1386010:intron 40.0%
GCGATTGAAGATTATTGAGG+AGG - tig0020780:61994-62013 Msa1386010:intron 40.0%
AGGTGGCTTTCTATGAGAAA+AGG - tig0020780:62029-62048 Msa1386010:intron 40.0%
AATAGAGAAAGGGAGAAGGT+AGG - tig0020780:62082-62101 Msa1386010:intron 40.0%
AAGAGGCAGACAAAGCTTAT+TGG - tig0020780:62228-62247 Msa1386010:intron 40.0%
AGGTTGCCAACATTGAAAAG+AGG - tig0020780:62279-62298 Msa1386010:intron 40.0%
ATGATTGAGAGAAGGAAACG+AGG + tig0020780:62631-62650 None:intergenic 40.0%
GAACACTGCATGTGCAAAAA+GGG + tig0020780:62665-62684 None:intergenic 40.0%
TGAACACTGCATGTGCAAAA+AGG + tig0020780:62666-62685 None:intergenic 40.0%
GCAGTGTTCAATGAATCTCT+TGG - tig0020780:62676-62695 Msa1386010:CDS 40.0%
! CGACCTTTATAGGCATGTTT+TGG - tig0020780:62941-62960 Msa1386010:five_prime_UTR 40.0%
CGACCAAAACATGCCTATAA+AGG + tig0020780:62947-62966 None:intergenic 40.0%
GAACTTATTAAGAGGGAAGC+TGG - tig0020780:62966-62985 Msa1386010:five_prime_UTR 40.0%
ATTGGAGTAACCACCGTAAC+CGG + tig0020780:59209-59228 None:intergenic 45.0%
GGTGGTTACTCCAATTTCGA+CGG - tig0020780:59214-59233 Msa1386010:three_prime_UTR 45.0%
ACTACTTCACCGGAGATCTA+CGG - tig0020780:59268-59287 Msa1386010:three_prime_UTR 45.0%
TCACTGAATCCGTAGATCTC+CGG + tig0020780:59280-59299 None:intergenic 45.0%
GAAGGAGAGTAACCAGGATT+GGG + tig0020780:59304-59323 None:intergenic 45.0%
AGAAGGAGAGTAACCAGGAT+TGG + tig0020780:59305-59324 None:intergenic 45.0%
CTCTCCTTCTCCGTTTGAAT+CGG - tig0020780:59315-59334 Msa1386010:three_prime_UTR 45.0%
! GTAACCGATTCAAACGGAGA+AGG + tig0020780:59322-59341 None:intergenic 45.0%
!! AACGGGAACGATAACGGAAA+CGG - tig0020780:59349-59368 Msa1386010:three_prime_UTR 45.0%
AAGGTTACGCTCTTCGTGAA+TGG - tig0020780:59446-59465 Msa1386010:CDS 45.0%
!! GGTAATGGAAGTTGGATCTG+CGG - tig0020780:59869-59888 Msa1386010:intron 45.0%
ACAATCGAACTCGGTATCCT+GGG + tig0020780:59987-60006 None:intergenic 45.0%
AACAATCGAACTCGGTATCC+TGG + tig0020780:59988-60007 None:intergenic 45.0%
GTCACGTAATGACTACCCTT+TGG + tig0020780:60100-60119 None:intergenic 45.0%
GATATCTCCCCTGTTGAACT+TGG - tig0020780:60179-60198 Msa1386010:intron 45.0%
GACAGATCCAAGTTCAACAG+GGG + tig0020780:60189-60208 None:intergenic 45.0%
CAAATGAACCCTTAGTCCAG+TGG - tig0020780:60566-60585 Msa1386010:intron 45.0%
GGATAGGGGAGGAATATGTT+AGG + tig0020780:60812-60831 None:intergenic 45.0%
GGGAAATTCTTGAGTTTCCC+TGG - tig0020780:60956-60975 Msa1386010:intron 45.0%
AGTTTCCCTGGATAAGGAGT+AGG - tig0020780:60968-60987 Msa1386010:intron 45.0%
GTTTCCCTGGATAAGGAGTA+GGG - tig0020780:60969-60988 Msa1386010:intron 45.0%
CCATGCTCCCTTATTGTAAC+AGG + tig0020780:61585-61604 None:intergenic 45.0%
CCTGTTACAATAAGGGAGCA+TGG - tig0020780:61582-61601 Msa1386010:intron 45.0%
TTGCTGCCGTATGAAATCAC+TGG + tig0020780:61674-61693 None:intergenic 45.0%
!! GAAGAGAAGCTTTGGAGCAA+TGG + tig0020780:61703-61722 None:intergenic 45.0%
AGCTAGAGGAGAAGGAGAAA+AGG - tig0020780:61960-61979 Msa1386010:intron 45.0%
GCTAGAGGAGAAGGAGAAAA+GGG - tig0020780:61961-61980 Msa1386010:intron 45.0%
GAAGATTATTGAGGAGGCTG+AGG - tig0020780:62000-62019 Msa1386010:intron 45.0%
GCCAACATTGAAAAGAGGAG+AGG - tig0020780:62284-62303 Msa1386010:intron 45.0%
! GCCTCTCCTCTTTTCAATGT+TGG + tig0020780:62288-62307 None:intergenic 45.0%
GAGGAGAGGCAAAAAAGATC+AGG - tig0020780:62298-62317 Msa1386010:intron 45.0%
CCTTGGACAACAGTGATTGA+CGG + tig0020780:62332-62351 None:intergenic 45.0%
TAGCAGTATTTGTCGCATCC+TGG + tig0020780:62384-62403 None:intergenic 45.0%
TTAGCATCTTTAGCAGGAGC+AGG + tig0020780:62449-62468 None:intergenic 45.0%
GCGTCTTTAGCATCTTTAGC+AGG + tig0020780:62455-62474 None:intergenic 45.0%
GATGCTAAAGACGCAAAGGA+TGG - tig0020780:62461-62480 Msa1386010:intron 45.0%
TGCATCAGGATCACAACCAA+AGG - tig0020780:62526-62545 Msa1386010:intron 45.0%
AGGATCACAACCAAAGGATG+TGG - tig0020780:62532-62551 Msa1386010:intron 45.0%
GGCAAAATTATGCAGCAGGT+TGG + tig0020780:62610-62629 None:intergenic 45.0%
ACGAGGCAAAATTATGCAGC+AGG + tig0020780:62614-62633 None:intergenic 45.0%
!! ATATGAAATATTTATATTAA+TGG - tig0020780:61373-61392 Msa1386010:intron 5.0%
GACGTGAAGTTCAGTGCTGT+TGG + tig0020780:59016-59035 None:intergenic 50.0%
!! GGAGAAGGTGTCGTCTTGAT+CGG + tig0020780:59188-59207 None:intergenic 50.0%
GATCAAGACGACACCTTCTC+CGG - tig0020780:59187-59206 Msa1386010:three_prime_UTR 50.0%
CTCCGGTGAAGTAGTTTCAG+CGG + tig0020780:59263-59282 None:intergenic 50.0%
GGATTCAGTGATCCCAATCC+TGG - tig0020780:59289-59308 Msa1386010:three_prime_UTR 50.0%
AACGGAGAAGGAGAGTAACC+AGG + tig0020780:59310-59329 None:intergenic 50.0%
! TCTGCGGTGAGGTATTCGTT+AGG - tig0020780:59885-59904 Msa1386010:intron 50.0%
! CTGCGGTGAGGTATTCGTTA+GGG - tig0020780:59886-59905 Msa1386010:intron 50.0%
CAATCGAACTCGGTATCCTG+GGG + tig0020780:59986-60005 None:intergenic 50.0%
!! GACGCCTTGCTATTTGAAGC+TGG - tig0020780:60117-60136 Msa1386010:intron 50.0%
TCGACCCTACTCCTTATCCA+GGG + tig0020780:60976-60995 None:intergenic 50.0%
ATCGACCCTACTCCTTATCC+AGG + tig0020780:60977-60996 None:intergenic 50.0%
TGCCATTGAGCTAGAGGAGA+AGG - tig0020780:61952-61971 Msa1386010:intron 50.0%
! CTCCTTCTCCTCTAGCTCAA+TGG + tig0020780:61957-61976 None:intergenic 50.0%
! TGAGGAGGCTGAGGAGTATA+AGG - tig0020780:62009-62028 Msa1386010:intron 50.0%
TCAATGTTGGCAACCTCACG+AGG + tig0020780:62275-62294 None:intergenic 50.0%
CCGTCAATCACTGTTGTCCA+AGG - tig0020780:62329-62348 Msa1386010:intron 50.0%
GAAAGATCTGTGGGTTTGCC+GGG + tig0020780:62362-62381 None:intergenic 50.0%
GGAAAGATCTGTGGGTTTGC+CGG + tig0020780:62363-62382 None:intergenic 50.0%
GCAAACCCACAGATCTTTCC+AGG - tig0020780:62363-62382 Msa1386010:intron 50.0%
CGCATCCTGGAAAGATCTGT+GGG + tig0020780:62371-62390 None:intergenic 50.0%
TCGCATCCTGGAAAGATCTG+TGG + tig0020780:62372-62391 None:intergenic 50.0%
CCAAAGGATGTGGCCTCTAA+CGG - tig0020780:62542-62561 Msa1386010:CDS 50.0%
!! TTATGCAGCAGGTTGGTCCT+CGG + tig0020780:62603-62622 None:intergenic 50.0%
!! GTCGTCAGTGAAAGCGTCGA+AGG + tig0020780:59125-59144 None:intergenic 55.0%
!! GAAGGTGTCGTCTTGATCGG+AGG + tig0020780:59185-59204 None:intergenic 55.0%
GACGACACCTTCTCCGGTTA+CGG - tig0020780:59193-59212 Msa1386010:three_prime_UTR 55.0%
GTAACCACCGTAACCGGAGA+AGG + tig0020780:59203-59222 None:intergenic 55.0%
GGTGACATCGCCGTCGAAAT+TGG + tig0020780:59227-59246 None:intergenic 55.0%
CGGTGAAGTAGTTTCAGCGG+CGG + tig0020780:59260-59279 None:intergenic 55.0%
CGCCGCTGAAACTACTTCAC+CGG - tig0020780:59258-59277 Msa1386010:three_prime_UTR 55.0%
TCACCAGGTGGAGGAAGGAT+CGG + tig0020780:59412-59431 None:intergenic 55.0%
TCCACCTGGTGAGATGGAGT+CGG - tig0020780:59420-59439 Msa1386010:CDS 55.0%
TGGAAGTTGGATCTGCGGTG+AGG - tig0020780:59874-59893 Msa1386010:intron 55.0%
TTGCGCGTGTTATACACCCC+AGG - tig0020780:59967-59986 Msa1386010:CDS 55.0%
GGAGTAGGGTCGATCAACTG+AGG - tig0020780:60983-61002 Msa1386010:intron 55.0%
! GGAGGCTGAGGAGTATAAGG+TGG - tig0020780:62012-62031 Msa1386010:intron 55.0%
TGCAGAGCTCATTCCTCGTG+AGG - tig0020780:62259-62278 Msa1386010:intron 55.0%
TTTAGCAGGAGCAGGTGGTG+GGG + tig0020780:62441-62460 None:intergenic 55.0%
CTTTAGCAGGAGCAGGTGGT+GGG + tig0020780:62442-62461 None:intergenic 55.0%
TCTTTAGCAGGAGCAGGTGG+TGG + tig0020780:62443-62462 None:intergenic 55.0%
GCATCTTTAGCAGGAGCAGG+TGG + tig0020780:62446-62465 None:intergenic 55.0%
GTAACTGGGTCAGCAGCTGA+AGG - tig0020780:62503-62522 Msa1386010:intron 55.0%
! TCAGCAGCTGAAGGTGCATC+AGG - tig0020780:62512-62531 Msa1386010:intron 55.0%
CCGTTAGAGGCCACATCCTT+TGG + tig0020780:62545-62564 None:intergenic 55.0%
!! CTTTCTGGGGTTCCTCTGCT+GGG + tig0020780:62568-62587 None:intergenic 55.0%
!! TCTTTCTGGGGTTCCTCTGC+TGG + tig0020780:62569-62588 None:intergenic 55.0%
GTCGCAGAGGCTTCTTTCTG+GGG + tig0020780:62581-62600 None:intergenic 55.0%
GGTCGCAGAGGCTTCTTTCT+GGG + tig0020780:62582-62601 None:intergenic 55.0%
! GGTGTCGTCTTGATCGGAGG+CGG + tig0020780:59182-59201 None:intergenic 60.0%
GACACCTTCTCCGGTTACGG+TGG - tig0020780:59196-59215 Msa1386010:three_prime_UTR 60.0%
TTCAGCGGCGGAGTGATCGA+CGG + tig0020780:59248-59267 None:intergenic 60.0%
CCATCTCACCAGGTGGAGGA+AGG + tig0020780:59417-59436 None:intergenic 60.0%
CCTTCCTCCACCTGGTGAGA+TGG - tig0020780:59414-59433 Msa1386010:CDS 60.0%
GACTCCATCTCACCAGGTGG+AGG + tig0020780:59421-59440 None:intergenic 60.0%
TCCGACTCCATCTCACCAGG+TGG + tig0020780:59424-59443 None:intergenic 60.0%
ACCTGGTGAGATGGAGTCGG+AGG - tig0020780:59423-59442 Msa1386010:CDS 60.0%
TCCTCCGACTCCATCTCACC+AGG + tig0020780:59427-59446 None:intergenic 60.0%
GGTGAGATGGAGTCGGAGGA+AGG - tig0020780:59427-59446 Msa1386010:CDS 60.0%
ACGCTCTTCGTGAATGGCGC+CGG - tig0020780:59452-59471 Msa1386010:CDS 60.0%
CACGCCGAGCAACTGTCCTA+TGG - tig0020780:61252-61271 Msa1386010:intron 60.0%
GTTGTCCAAGGCCCTAAGCC+CGG - tig0020780:62341-62360 Msa1386010:intron 60.0%
CTGTGGGTTTGCCGGGCTTA+GGG + tig0020780:62355-62374 None:intergenic 60.0%
TCTGTGGGTTTGCCGGGCTT+AGG + tig0020780:62356-62375 None:intergenic 60.0%
GGGGGAATCATGTGAGGTGG+TGG + tig0020780:62422-62441 None:intergenic 60.0%
GGTGGGGGAATCATGTGAGG+TGG + tig0020780:62425-62444 None:intergenic 60.0%
!! GGTGGTGGGGGAATCATGTG+AGG + tig0020780:62428-62447 None:intergenic 60.0%
! TTAGCAGGAGCAGGTGGTGG+GGG + tig0020780:62440-62459 None:intergenic 60.0%
TTCCTCTGCTGGGCCGTTAG+AGG + tig0020780:62558-62577 None:intergenic 60.0%
CGGTCGCAGAGGCTTCTTTC+TGG + tig0020780:62583-62602 None:intergenic 60.0%
GAAAGAAGCCTCTGCGACCG+AGG - tig0020780:62583-62602 Msa1386010:CDS 60.0%
TCGGAGGCGGCGAAGTTGTG+AGG + tig0020780:59169-59188 None:intergenic 65.0%
GGTCCGATCCTTCCTCCACC+TGG - tig0020780:59406-59425 Msa1386010:CDS 65.0%
GTTTGCCGGGCTTAGGGCCT+TGG + tig0020780:62349-62368 None:intergenic 65.0%
! AGGTTGGTCCTCGGTCGCAG+AGG + tig0020780:62594-62613 None:intergenic 65.0%
GGCCTCTAACGGCCCAGCAG+AGG - tig0020780:62553-62572 Msa1386010:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0020780 gene 59006 63009 59006 ID=Msa1386010;Name=Msa1386010
tig0020780 mRNA 59006 63009 59006 ID=Msa1386010-mRNA-1;Parent=Msa1386010;Name=Msa1386010-mRNA-1;_AED=0.02;_eAED=0.02;_QI=106|1|1|1|1|1|3|387|313
tig0020780 exon 59006 59818 59006 ID=Msa1386010-mRNA-1:exon:9939;Parent=Msa1386010-mRNA-1
tig0020780 exon 59916 60069 59916 ID=Msa1386010-mRNA-1:exon:9938;Parent=Msa1386010-mRNA-1
tig0020780 exon 62542 63009 62542 ID=Msa1386010-mRNA-1:exon:9937;Parent=Msa1386010-mRNA-1
tig0020780 five_prime_UTR 62904 63009 62904 ID=Msa1386010-mRNA-1:five_prime_utr;Parent=Msa1386010-mRNA-1
tig0020780 CDS 62542 62903 62542 ID=Msa1386010-mRNA-1:cds;Parent=Msa1386010-mRNA-1
tig0020780 CDS 59916 60069 59916 ID=Msa1386010-mRNA-1:cds;Parent=Msa1386010-mRNA-1
tig0020780 CDS 59393 59818 59393 ID=Msa1386010-mRNA-1:cds;Parent=Msa1386010-mRNA-1
tig0020780 three_prime_UTR 59006 59392 59006 ID=Msa1386010-mRNA-1:three_prime_utr;Parent=Msa1386010-mRNA-1
Gene Sequence

>Msa1386010

ATGTCTTCTTCCTTCGACGCTTTCACTGACGACTTGAACGTCAACTCATCTTCTCCTCACAACTTCGCCGCCTCCGATCAAGACGACACCTTCTCCGGTTACGGTGGTTACTCCAATTTCGACGGCGATGTCACCGTCGATCACTCCGCCGCTGAAACTACTTCACCGGAGATCTACGGATTCAGTGATCCCAATCCTGGTTACTCTCCTTCTCCGTTTGAATCGGTTACTGTAGAAAACGGGAACGATAACGGAAACGGTTATGGTGATGATGACGGTGTTTTTGTTTCTGATGGTCCGATCCTTCCTCCACCTGGTGAGATGGAGTCGGAGGAAGGTTACGCTCTTCGTGAATGGCGCCGTCAAAATGCCATTGAGCTAGAGGAGAAGGAGAAAAGGGAAAAAGAAATGCGATTGAAGATTATTGAGGAGGCTGAGGAGTATAAGGTGGCTTTCTATGAGAAAAGGAAGCTTAATGTTGAGACTAACAAGGTTCAAAATAGAGAAAGGGAGAAGTTATTCGTAGCTAATCAAGAGAAGTTTCACAAAGAGGCAGACAAAGCTTATTGGAAGACAATTGCAGAGCTCATTCCTCGTGAGGTTGCCAACATTGAAAAGAGGAGAGGCAAAAAAGATCAGGATAAGAAGCCGTCAATCACTGTTGTCCAAGGCCCTAAGCCCGGCAAACCCACAGATCTTTCCAGGATGCGACAAATACTGCTAAAGCTGAAGCATACACCACCACCTCACATGATTCCCCCACCACCTGCTCCTGCTAAAGATGCTAAAGACGCAAAGGATGGAAAAGAAACATCATCTAAAGTAACTGGGTCAGCAGCTGAAGGTGCATCAGGATCACAACCAAAGGATGTGGCCTCTAACGGCCCAGCAGAGGAACCCCAGAAAGAAGCCTCTGCGACCGAGGACCAACCTGCTGCATAA
Protein sequence

>Msa1386010

MSSSFDAFTDDLNVNSSSPHNFAASDQDDTFSGYGGYSNFDGDVTVDHSAAETTSPEIYGFSDPNPGYSPSPFESVTVENGNDNGNGYGDDDGVFVSDGPILPPPGEMESEEGYALREWRRQNAIELEEKEKREKEMRLKIIEEAEEYKVAFYEKRKLNVETNKVQNREREKLFVANQEKFHKEADKAYWKTIAELIPREVANIEKRRGKKDQDKKPSITVVQGPKPGKPTDLSRMRQILLKLKHTPPPHMIPPPPAPAKDAKDAKDGKETSSKVTGSAAEGASGSQPKDVASNGPAEEPQKEASATEDQPAA*