AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0430040


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0430040 MtrunA17_Chr3g0133961 95.595 227 7 2 1 226 1 225 3.76e-160 442
Msa0430040 MtrunA17_Chr3g0134241 47.287 129 68 0 95 223 73 201 3.83e-40 136
Msa0430040 MtrunA17_Chr8g0353071 40.351 114 68 0 108 221 1892 2005 2.98e-27 109
Msa0430040 MtrunA17_Chr5g0398111 45.122 82 42 2 122 203 1371 1449 1.03e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0430040 AT1G45230.1 79.032 124 26 0 102 225 95 218 6.26e-74 223
Msa0430040 AT1G45230.2 78.226 124 27 0 102 225 95 218 2.03e-72 219
Msa0430040 AT3G46630.1 48.760 121 62 0 103 223 86 206 2.10e-39 135
Msa0430040 AT2G40030.1 38.333 120 74 0 102 221 1730 1849 3.38e-24 100

Find 54 sgRNAs with CRISPR-Local

Find 675 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAACTCAGTTATTATTTAT+TGG 0.193260 3_2:-81599810 None:intergenic
ACACCTAGAGCGATCAAAAT+TGG 0.221376 3_2:-81608588 None:intergenic
TTATTTATTGGACATTGTTT+TGG 0.272946 3_2:-81599798 None:intergenic
TGATTGGGAAGATCAGATTT+TGG 0.273498 3_2:+81600172 Msa0430040:CDS
TTCATATTGGAAATGCATAA+AGG 0.298841 3_2:+81608649 Msa0430040:CDS
GTTAGAACAATCCTTCATTC+TGG 0.300401 3_2:+81600221 Msa0430040:CDS
CGAGAAGAACGAAAAGAAAA+AGG 0.301719 3_2:-81599915 None:intergenic
ATGAAACTGTCTGCATATAA+TGG 0.319639 3_2:-81608692 None:intergenic
AGATATTGCCAATAATAAAA+TGG 0.338849 3_2:-81608969 None:intergenic
GTTTCATTCTCAGGCACTTC+AGG 0.339928 3_2:+81608708 Msa0430040:CDS
TGGCTAGTTTATCTTCTTGT+TGG 0.341526 3_2:+81599702 None:intergenic
TTCTACTTCCTCTTGTTGAT+AGG 0.367408 3_2:-81600114 None:intergenic
TCATATTGGAAATGCATAAA+GGG 0.369451 3_2:+81608650 Msa0430040:CDS
AACAAGATAAGTGGGTTGAT+TGG 0.378807 3_2:+81600156 Msa0430040:CDS
TATCTTCTTGTTGGTAATGT+TGG 0.389451 3_2:+81599711 Msa0430040:five_prime_UTR
TTTGGAAGATACCGTTCCTT+TGG 0.390892 3_2:+81600190 Msa0430040:CDS
TCATGCACTAGATATGAAAA+TGG 0.400058 3_2:+81601653 Msa0430040:intron
TTCTGAGATTCAGGGTGAAA+TGG 0.410731 3_2:-81601725 None:intergenic
ATGCAGACAGTTTCATTCTC+AGG 0.415645 3_2:+81608699 Msa0430040:CDS
ACAAGATAAGTGGGTTGATT+GGG 0.433929 3_2:+81600157 Msa0430040:CDS
AAACAATTTGCAAGGGAAAC+CGG 0.437923 3_2:+81600043 Msa0430040:CDS
CCTTTACCTTGTGAAAGAAC+CGG 0.453291 3_2:-81600062 None:intergenic
CACCTAGAGCGATCAAAATT+GGG 0.460298 3_2:-81608587 None:intergenic
GAACTTACTGTCCAGAATGA+AGG 0.464362 3_2:-81600232 None:intergenic
AAGAAGAAGAAGCTACTTTG+AGG 0.474047 3_2:-81600007 None:intergenic
TTCTCAGGCACTTCAGGAAG+CGG 0.475135 3_2:+81608714 Msa0430040:CDS
AGAAGAAGAAGCTACTTTGA+GGG 0.491159 3_2:-81600006 None:intergenic
CCGGTTCTTTCACAAGGTAA+AGG 0.518771 3_2:+81600062 Msa0430040:CDS
GAAGCTCAAAACAATTTGCA+AGG 0.519975 3_2:+81600035 Msa0430040:CDS
GAAGATACCGTTCCTTTGGT+TGG 0.535584 3_2:+81600194 Msa0430040:CDS
GTACTGATGAACAAGATAAG+TGG 0.571949 3_2:+81600147 Msa0430040:CDS
ATGTTCATAGTGCGACAAGA+TGG 0.575213 3_2:+81608611 Msa0430040:CDS
TACTGATGAACAAGATAAGT+GGG 0.576952 3_2:+81600148 Msa0430040:CDS
TGGAAGGAGCTTCTCAACAA+TGG 0.580302 3_2:-81601705 None:intergenic
CTTTCTCAGTTATTGTTGCG+AGG 0.587883 3_2:-81599760 None:intergenic
GAGATTCAGGGTGAAATGGA+AGG 0.592660 3_2:-81601721 None:intergenic
AGTGCGACAAGATGGAGAGC+TGG 0.593516 3_2:+81608619 Msa0430040:CDS
CAGCTATTCCTATCAACAAG+AGG 0.600071 3_2:+81600106 Msa0430040:CDS
ACAAGGTAAAGGAGGAATTG+TGG 0.601286 3_2:+81600073 Msa0430040:CDS
AACAAAACCAACCAAAGGAA+CGG 0.611291 3_2:-81600201 None:intergenic
AAGCTCAAAACAATTTGCAA+GGG 0.616378 3_2:+81600036 Msa0430040:CDS
GGGAAACCGGTTCTTTCACA+AGG 0.622484 3_2:+81600056 Msa0430040:CDS
GTTGCAAAATACTGAAGACA+TGG 0.626166 3_2:+81599839 Msa0430040:exon
TCTCAGTTATTGTTGCGAGG+TGG 0.631767 3_2:-81599757 None:intergenic
GTTCTAACAAAACCAACCAA+AGG 0.636609 3_2:-81600206 None:intergenic
TAATGTTGGCAAAGATCGCG+AGG 0.640210 3_2:+81599725 Msa0430040:five_prime_UTR
GTTCTTTCACAAGGTAAAGG+AGG 0.643061 3_2:+81600065 Msa0430040:CDS
GGAGTAATTCGCAGCATCCG+CGG 0.650499 3_2:-81608948 None:intergenic
ATGTGGAATCGATTATATCA+CGG 0.652788 3_2:+81601757 Msa0430040:CDS
TAGAGCGATCAAAATTGGGA+TGG 0.653406 3_2:-81608583 None:intergenic
AAACGAGAATGAAGCAACTG+TGG 0.672031 3_2:-81599975 None:intergenic
AATGTTGGCAAAGATCGCGA+GGG 0.697379 3_2:+81599726 Msa0430040:five_prime_UTR
AGGTAAAGGAGGAATTGTGG+AGG 0.732379 3_2:+81600076 Msa0430040:CDS
TAACAACTCACTAATCGCCG+CGG 0.750848 3_2:+81608931 Msa0430040:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACTTTTTTTTTTATTATCA+TGG + chr3_2:81600297-81600316 Msa0430040:intron 10.0%
!!! TTTTGATCTTTTAATATATA+AGG - chr3_2:81603218-81603237 None:intergenic 10.0%
!! TAATCTTAAGATATAATTTA+AGG - chr3_2:81605377-81605396 None:intergenic 10.0%
!! AATTATCCATATATAATTGA+GGG - chr3_2:81600266-81600285 None:intergenic 15.0%
!! AAATTATCCATATATAATTG+AGG - chr3_2:81600267-81600286 None:intergenic 15.0%
!!! TTTTTTATTATCATGGATTT+AGG + chr3_2:81600304-81600323 Msa0430040:intron 15.0%
!!! TGCAATAAAAATAATACTTT+TGG + chr3_2:81601863-81601882 Msa0430040:intron 15.0%
!!! GCAATAAAAATAATACTTTT+GGG + chr3_2:81601864-81601883 Msa0430040:intron 15.0%
!! TCAATTTAATATTAGATCAA+GGG - chr3_2:81601947-81601966 None:intergenic 15.0%
!! TTCAATTTAATATTAGATCA+AGG - chr3_2:81601948-81601967 None:intergenic 15.0%
!!! TTAATAAAAACTAACTCTTT+TGG - chr3_2:81602075-81602094 None:intergenic 15.0%
!!! TTTACAATTTTAACCTAATT+TGG + chr3_2:81602216-81602235 Msa0430040:intron 15.0%
!! AAAATAAATATAGAAGAGAT+AGG + chr3_2:81602770-81602789 Msa0430040:intron 15.0%
!! AATATACTCATTATTGATAT+AGG + chr3_2:81604000-81604019 Msa0430040:intron 15.0%
!! ATATACTCATTATTGATATA+GGG + chr3_2:81604001-81604020 Msa0430040:intron 15.0%
!!! AAGAATTTCAAATTTTTGTT+TGG - chr3_2:81604788-81604807 None:intergenic 15.0%
!! AATTCGGATATAAAAAAAAA+TGG - chr3_2:81605097-81605116 None:intergenic 15.0%
!! GTGAAAATAATGTTAAAAAA+AGG - chr3_2:81608804-81608823 None:intergenic 15.0%
!!! TTATTTATTGGACATTGTTT+TGG - chr3_2:81599801-81599820 None:intergenic 20.0%
!! CTAACTCAGTTATTATTTAT+TGG - chr3_2:81599813-81599832 None:intergenic 20.0%
!!! AAAAGAAAAAGGATTTTTGA+AGG - chr3_2:81599907-81599926 None:intergenic 20.0%
!! CAAAATCTTTCTCAATAAAT+TGG - chr3_2:81600419-81600438 None:intergenic 20.0%
!!! CAATTTATTGAGAAAGATTT+TGG + chr3_2:81600417-81600436 Msa0430040:intron 20.0%
!! TGACAAAGAGTTTAAATTTA+TGG - chr3_2:81600926-81600945 None:intergenic 20.0%
!!! AACCTTGTTAATTATTTTCA+TGG + chr3_2:81601573-81601592 Msa0430040:intron 20.0%
!! ATCCATGAAAATAATTAACA+AGG - chr3_2:81601578-81601597 None:intergenic 20.0%
!!! ATTTTTATTGCACTAAAAAC+AGG - chr3_2:81601855-81601874 None:intergenic 20.0%
!! TTATTAAAGATTAGCAAATC+AGG - chr3_2:81602256-81602275 None:intergenic 20.0%
!! AAAAAACCTATTTATACTAG+AGG - chr3_2:81602309-81602328 None:intergenic 20.0%
!! TACCTCAAATCTTAATTAAA+TGG - chr3_2:81602400-81602419 None:intergenic 20.0%
!! AGAAATGATTGTGATAATAT+TGG - chr3_2:81602879-81602898 None:intergenic 20.0%
!! AAACGATAACTTAGAAATAA+CGG - chr3_2:81602929-81602948 None:intergenic 20.0%
!! AATTGAGAAGAATAACAAAT+GGG - chr3_2:81603667-81603686 None:intergenic 20.0%
!! TAATTGAGAAGAATAACAAA+TGG - chr3_2:81603668-81603687 None:intergenic 20.0%
!!! ATAGATAATCTAAGATATCA+TGG - chr3_2:81604442-81604461 None:intergenic 20.0%
!! TTCGCTATATAATAATGATT+TGG + chr3_2:81604504-81604523 Msa0430040:intron 20.0%
!! TTCGCTATATAATAATGATT+TGG + chr3_2:81604504-81604523 Msa0430040:intron 20.0%
!!! TTATAAGGTTTTAGATAAGA+AGG - chr3_2:81604683-81604702 None:intergenic 20.0%
!! AAAACCTTATAACATCAAAA+TGG + chr3_2:81604691-81604710 Msa0430040:intron 20.0%
!! CAAACAAACAAAATTTAAGA+TGG - chr3_2:81604841-81604860 None:intergenic 20.0%
!!! TTTTTTTTATATCCGAATTG+TGG + chr3_2:81605098-81605117 Msa0430040:intron 20.0%
!! TATATTTCATAGTGAAGATT+GGG - chr3_2:81605190-81605209 None:intergenic 20.0%
!! ATATATTTCATAGTGAAGAT+TGG - chr3_2:81605191-81605210 None:intergenic 20.0%
!!! TTGATAATAACAACGAAATA+TGG - chr3_2:81605404-81605423 None:intergenic 20.0%
!!! TGGAGTTTTGTATATAATTA+AGG + chr3_2:81605451-81605470 Msa0430040:intron 20.0%
!!! GGAGTTTTGTATATAATTAA+GGG + chr3_2:81605452-81605471 Msa0430040:intron 20.0%
!! TTAATGTTGTTAAAGCTATA+GGG - chr3_2:81605580-81605599 None:intergenic 20.0%
!! ATTAATGTTGTTAAAGCTAT+AGG - chr3_2:81605581-81605600 None:intergenic 20.0%
!!! AGAAGTTTTTTTTTTTTGCA+AGG + chr3_2:81606634-81606653 Msa0430040:intron 20.0%
!! TTATTCTTAAAGTTTAGCAA+GGG - chr3_2:81607446-81607465 None:intergenic 20.0%
!! TTTATTCTTAAAGTTTAGCA+AGG - chr3_2:81607447-81607466 None:intergenic 20.0%
!!! CTTTAAGAATAAAACCTATT+TGG + chr3_2:81607454-81607473 Msa0430040:intron 20.0%
!!! GATAAATGCATTATGAATTT+TGG + chr3_2:81607707-81607726 Msa0430040:intron 20.0%
!! TCTAGTTATACTTATTCAAA+TGG + chr3_2:81608039-81608058 Msa0430040:intron 20.0%
!!! ATGATAATGCTGTAATAATT+AGG + chr3_2:81608085-81608104 Msa0430040:intron 20.0%
!!! TTTTTACAGAATATAGAACA+CGG - chr3_2:81608241-81608260 None:intergenic 20.0%
!! CAATAATAGTACAAGAAAAA+TGG - chr3_2:81608832-81608851 None:intergenic 20.0%
!!! GAATTACTCCATTTTATTAT+TGG + chr3_2:81608961-81608980 Msa0430040:three_prime_UTR 20.0%
! TGATGTTGAATTTATTCAGA+AGG + chr3_2:81600350-81600369 Msa0430040:intron 25.0%
!! TTTATTGAGAAAGATTTTGG+TGG + chr3_2:81600420-81600439 Msa0430040:intron 25.0%
! TTAGAATCAAACATACACTT+TGG - chr3_2:81600486-81600505 None:intergenic 25.0%
! GATAAACATTGAGTATGATT+TGG - chr3_2:81600649-81600668 None:intergenic 25.0%
! TTAAATCACCACTAAATTTG+AGG + chr3_2:81600723-81600742 Msa0430040:intron 25.0%
! TAAATCACCACTAAATTTGA+GGG + chr3_2:81600724-81600743 Msa0430040:intron 25.0%
!!! TTGGAAGTATCATTTAGTTA+GGG + chr3_2:81600885-81600904 Msa0430040:intron 25.0%
! AAATGTTAAAAGTCCCAAAT+TGG + chr3_2:81601039-81601058 Msa0430040:intron 25.0%
! CTGAAGAAATGTTTATAACT+GGG + chr3_2:81601074-81601093 Msa0430040:intron 25.0%
! TGAAGAAATGTTTATAACTG+GGG + chr3_2:81601075-81601094 Msa0430040:intron 25.0%
! TTATTGCATACATAAAACCA+TGG - chr3_2:81601454-81601473 None:intergenic 25.0%
!! TGTTCTGTTTTCATTTATCT+TGG + chr3_2:81601603-81601622 Msa0430040:intron 25.0%
! TGCATTATTCAATTGACAAA+AGG + chr3_2:81601814-81601833 Msa0430040:intron 25.0%
! AGGTTAAAATTGTAAACGAT+TGG - chr3_2:81602212-81602231 None:intergenic 25.0%
! CAAATCTTAATTAAATGGCA+AGG - chr3_2:81602395-81602414 None:intergenic 25.0%
!! TGCCATTTAATTAAGATTTG+AGG + chr3_2:81602395-81602414 Msa0430040:intron 25.0%
!!! AAATTAATTTTGGAAACCTG+CGG - chr3_2:81602549-81602568 None:intergenic 25.0%
!! CTGAGATGCTAAATTAATTT+TGG - chr3_2:81602559-81602578 None:intergenic 25.0%
!! GATCAATATTGATTGTTGAA+TGG - chr3_2:81602695-81602714 None:intergenic 25.0%
! TCAATATTGATCTAAGTGTA+TGG + chr3_2:81602703-81602722 Msa0430040:intron 25.0%
!!! TTGTTATCTTTTAAGGGATT+TGG - chr3_2:81602964-81602983 None:intergenic 25.0%
!!! TCGACTTTGTTATCTTTTAA+GGG - chr3_2:81602970-81602989 None:intergenic 25.0%
!!! ATCGACTTTGTTATCTTTTA+AGG - chr3_2:81602971-81602990 None:intergenic 25.0%
! TAAAAGATAACAAAGTCGAT+CGG + chr3_2:81602971-81602990 Msa0430040:intron 25.0%
!!! AAAGGAGAAGGAAATTTTTT+TGG - chr3_2:81603541-81603560 None:intergenic 25.0%
! AGGTTACATATCTTTATAAG+GGG - chr3_2:81603575-81603594 None:intergenic 25.0%
! GAGGTTACATATCTTTATAA+GGG - chr3_2:81603576-81603595 None:intergenic 25.0%
! ATTTATGAGTAACTTTCAGA+AGG - chr3_2:81603983-81604002 None:intergenic 25.0%
!!! AGGTGAATTATTTGTTTTAG+TGG - chr3_2:81604267-81604286 None:intergenic 25.0%
!!! AATGCCATTTTGATGTTATA+AGG - chr3_2:81604698-81604717 None:intergenic 25.0%
!!! TTTTGTTTGGCTTAAAACTT+TGG - chr3_2:81604775-81604794 None:intergenic 25.0%
!!! TTTTGCATTATTTTTGTCTC+AGG + chr3_2:81605031-81605050 Msa0430040:intron 25.0%
! ATTTCTGTTAAGCAAAAGTT+GGG - chr3_2:81605130-81605149 None:intergenic 25.0%
! AATTTCTGTTAAGCAAAAGT+TGG - chr3_2:81605131-81605150 None:intergenic 25.0%
!! ACTTTTGCTTAACAGAAATT+TGG + chr3_2:81605131-81605150 Msa0430040:intron 25.0%
!! ATTAGTTTCTCTGTTTAACT+AGG + chr3_2:81605425-81605444 Msa0430040:intron 25.0%
! TATACTACAATTTACAATGG+TGG - chr3_2:81605604-81605623 None:intergenic 25.0%
! GGTTATACTACAATTTACAA+TGG - chr3_2:81605607-81605626 None:intergenic 25.0%
!!! AAACTGGTTTGTAAGTTAAT+GGG - chr3_2:81605850-81605869 None:intergenic 25.0%
! AATTTCTACTTAACCTTTGA+AGG - chr3_2:81606032-81606051 None:intergenic 25.0%
!!! AGTTTTTTTTTTTTGCAAGG+TGG + chr3_2:81606637-81606656 Msa0430040:intron 25.0%
!! ACATAGGCATTACAAATTTT+CGG - chr3_2:81606817-81606836 None:intergenic 25.0%
!!! GTTTTTCAAAATTGACTTGT+GGG - chr3_2:81606901-81606920 None:intergenic 25.0%
!!! AGTTTTTCAAAATTGACTTG+TGG - chr3_2:81606902-81606921 None:intergenic 25.0%
! CAATAAAATTATGGATTCCT+TGG + chr3_2:81607055-81607074 Msa0430040:intron 25.0%
!! AGTGTATTTTGCAATTACTA+AGG - chr3_2:81607509-81607528 None:intergenic 25.0%
! TTTGAATGATTATCACATCA+CGG + chr3_2:81607743-81607762 Msa0430040:intron 25.0%
! TGCTGTAATAATTAGGTAAA+TGG + chr3_2:81608092-81608111 Msa0430040:intron 25.0%
! TCAAGATTAGAAAGCAAAAT+GGG - chr3_2:81608362-81608381 None:intergenic 25.0%
! TTCATATTGGAAATGCATAA+AGG + chr3_2:81608649-81608668 Msa0430040:CDS 25.0%
! TCATATTGGAAATGCATAAA+GGG + chr3_2:81608650-81608669 Msa0430040:CDS 25.0%
! ATAGTACAAGAAAAATGGAA+GGG - chr3_2:81608827-81608846 None:intergenic 25.0%
! AATAGTACAAGAAAAATGGA+AGG - chr3_2:81608828-81608847 None:intergenic 25.0%
!! TATCTTCTTGTTGGTAATGT+TGG + chr3_2:81599711-81599730 Msa0430040:five_prime_UTR 30.0%
!! ATGCAGTAGTATTTTTGTGT+TGG - chr3_2:81599877-81599896 None:intergenic 30.0%
AAGCTCAAAACAATTTGCAA+GGG + chr3_2:81600036-81600055 Msa0430040:CDS 30.0%
TACTGATGAACAAGATAAGT+GGG + chr3_2:81600148-81600167 Msa0430040:CDS 30.0%
ACCTAACCCTCAATTATATA+TGG + chr3_2:81600257-81600276 Msa0430040:intron 30.0%
TCCATATATAATTGAGGGTT+AGG - chr3_2:81600261-81600280 None:intergenic 30.0%
AAGGATTTAGATACTTCAAC+TGG + chr3_2:81600369-81600388 Msa0430040:intron 30.0%
!! GATCTTGAGTGAATTGATTT+TGG + chr3_2:81600518-81600537 Msa0430040:intron 30.0%
! TTTGGCTAAAAGTAAGTTGA+AGG + chr3_2:81600536-81600555 Msa0430040:intron 30.0%
TTAGTGGTGATTTAAGTGAT+TGG - chr3_2:81600718-81600737 None:intergenic 30.0%
! TCTGAAATCATATTTCACGA+AGG - chr3_2:81600790-81600809 None:intergenic 30.0%
GACATAGTATCTAAGAAAGT+TGG + chr3_2:81600866-81600885 Msa0430040:intron 30.0%
!! GTTGGAAGTATCATTTAGTT+AGG + chr3_2:81600884-81600903 Msa0430040:intron 30.0%
! TCACCTCTTGTATTTAAAAC+AGG + chr3_2:81600943-81600962 Msa0430040:intron 30.0%
!! CATCCTGTTTTAAATACAAG+AGG - chr3_2:81600949-81600968 None:intergenic 30.0%
CCAGTTATAAACATTTCTTC+AGG - chr3_2:81601076-81601095 None:intergenic 30.0%
CCTGAAGAAATGTTTATAAC+TGG + chr3_2:81601073-81601092 Msa0430040:intron 30.0%
GAAGAAATGTTTATAACTGG+GGG + chr3_2:81601076-81601095 Msa0430040:intron 30.0%
ATCTCTTAGAAATTGAGGTT+GGG - chr3_2:81601144-81601163 None:intergenic 30.0%
TACTCATCTCTTAGAAATTG+AGG - chr3_2:81601149-81601168 None:intergenic 30.0%
TTCTCTTAGAAATTGAGGTT+GGG - chr3_2:81601217-81601236 None:intergenic 30.0%
TACTCTTCTCTTAGAAATTG+AGG - chr3_2:81601222-81601241 None:intergenic 30.0%
TACTGATATGATGCTTGAAA+TGG + chr3_2:81601240-81601259 Msa0430040:intron 30.0%
TTTGCCATTCAATATTGCAA+AGG + chr3_2:81601323-81601342 Msa0430040:intron 30.0%
ACAACCTTTGCAATATTGAA+TGG - chr3_2:81601330-81601349 None:intergenic 30.0%
AATACCTGGGCAATATAAAA+TGG + chr3_2:81601354-81601373 Msa0430040:intron 30.0%
AATAATCAATGCAGTGAAGA+TGG + chr3_2:81601469-81601488 Msa0430040:intron 30.0%
ATAATCAATGCAGTGAAGAT+GGG + chr3_2:81601470-81601489 Msa0430040:intron 30.0%
CTAGTAAGTTATGTTGAGTT+TGG - chr3_2:81601506-81601525 None:intergenic 30.0%
TCATGCACTAGATATGAAAA+TGG + chr3_2:81601653-81601672 Msa0430040:intron 30.0%
!!! CAATCTTTTTCTGAGATTCA+GGG - chr3_2:81601736-81601755 None:intergenic 30.0%
ATGTGGAATCGATTATATCA+CGG + chr3_2:81601757-81601776 Msa0430040:CDS 30.0%
!!! TTTTGGGTTTAGCAATCTAT+CGG + chr3_2:81601880-81601899 Msa0430040:intron 30.0%
! ATTGAAAATGCTTTGCTGTA+TGG + chr3_2:81601962-81601981 Msa0430040:intron 30.0%
TGGTCTTTCCAATAAATGAT+AGG + chr3_2:81601982-81602001 Msa0430040:intron 30.0%
AGGCAAATCCTATCATTTAT+TGG - chr3_2:81601993-81602012 None:intergenic 30.0%
TTGCACTTTAACCAGTTATT+GGG - chr3_2:81602029-81602048 None:intergenic 30.0%
TATGAGCCTCTAGTATAAAT+AGG + chr3_2:81602300-81602319 Msa0430040:intron 30.0%
!! AATTAATTTTGGAAACCTGC+GGG - chr3_2:81602548-81602567 None:intergenic 30.0%
ATTAATTTAGCATCTCAGTC+TGG + chr3_2:81602561-81602580 Msa0430040:intron 30.0%
ATGCTTTCAGATACTTAATC+AGG - chr3_2:81603020-81603039 None:intergenic 30.0%
CAAAGAGATTCAAGATGATT+TGG - chr3_2:81603146-81603165 None:intergenic 30.0%
!! ACATCATTTTGGGAGAATTT+TGG - chr3_2:81603430-81603449 None:intergenic 30.0%
GGAGGTTACATATCTTTATA+AGG - chr3_2:81603577-81603596 None:intergenic 30.0%
ATGAACTAGGTCACTTAAAA+AGG - chr3_2:81603598-81603617 None:intergenic 30.0%
AAAGGAAGAAAGAATGAACT+AGG - chr3_2:81603611-81603630 None:intergenic 30.0%
AGTCAAATAGTGTATTAGTG+TGG - chr3_2:81603795-81603814 None:intergenic 30.0%
CATTATTGATATAGGGACAT+TGG + chr3_2:81604008-81604027 Msa0430040:intron 30.0%
AGGAAAATAACGTGTATGAT+TGG - chr3_2:81604037-81604056 None:intergenic 30.0%
ATTTGCACAATCCTTTAACT+AGG - chr3_2:81604300-81604319 None:intergenic 30.0%
AATGACAAACAAGACAAAAC+TGG - chr3_2:81605069-81605088 None:intergenic 30.0%
!!! GTTTTGTCTTGTTTGTCATT+TGG + chr3_2:81605069-81605088 Msa0430040:intron 30.0%
TTTCTGTTAAGCAAAAGTTG+GGG - chr3_2:81605129-81605148 None:intergenic 30.0%
! CTCTTGTTCTAGATATGATT+TGG + chr3_2:81605160-81605179 Msa0430040:intron 30.0%
TTCTCTGTTTAACTAGGATT+TGG + chr3_2:81605431-81605450 Msa0430040:intron 30.0%
!!! TATAGGGTTTTAGATAAGGA+AGG - chr3_2:81605564-81605583 None:intergenic 30.0%
!!! AAGCTATAGGGTTTTAGATA+AGG - chr3_2:81605568-81605587 None:intergenic 30.0%
AGATTATTCTCATATAGTGG+AGG - chr3_2:81605716-81605735 None:intergenic 30.0%
GACAGATTATTCTCATATAG+TGG - chr3_2:81605719-81605738 None:intergenic 30.0%
TGAGAATAATCTGTCCAATA+AGG + chr3_2:81605724-81605743 Msa0430040:intron 30.0%
TAATCTGTCCAATAAGGTTT+AGG + chr3_2:81605730-81605749 Msa0430040:intron 30.0%
AGGATATTCCTAAACCTTAT+TGG - chr3_2:81605741-81605760 None:intergenic 30.0%
!! GAAACTGGTTTGTAAGTTAA+TGG - chr3_2:81605851-81605870 None:intergenic 30.0%
! GGAGGTTATTCACATTTTAT+GGG - chr3_2:81606077-81606096 None:intergenic 30.0%
ACTTTGCTGAAAAATGCTAT+AGG + chr3_2:81606201-81606220 Msa0430040:intron 30.0%
TAAGAACAGTAAAAGCCTTA+TGG - chr3_2:81606488-81606507 None:intergenic 30.0%
TCTCAATCACATCATATACA+AGG - chr3_2:81606562-81606581 None:intergenic 30.0%
! AGTGTTTTTCTTCAACATCT+TGG - chr3_2:81606705-81606724 None:intergenic 30.0%
AATTTGTAATGCCTATGTTG+AGG + chr3_2:81606819-81606838 Msa0430040:intron 30.0%
ATCCACTGGCAATAAAATTA+TGG + chr3_2:81607046-81607065 Msa0430040:intron 30.0%
! ATCCATAATTTTATTGCCAG+TGG - chr3_2:81607051-81607070 None:intergenic 30.0%
GGGATTATTAAAAACAATCC+TGG - chr3_2:81607094-81607113 None:intergenic 30.0%
!! TTTTAACTCTGTTCAACATG+AGG - chr3_2:81607147-81607166 None:intergenic 30.0%
AGAGTTAAAACTCAACCAAA+TGG + chr3_2:81607157-81607176 Msa0430040:intron 30.0%
ATGTCAATTCCTAACTATCA+TGG - chr3_2:81607687-81607706 None:intergenic 30.0%
AACTGAATTACTCAGATGTA+GGG - chr3_2:81607788-81607807 None:intergenic 30.0%
TAACTGAATTACTCAGATGT+AGG - chr3_2:81607789-81607808 None:intergenic 30.0%
AATCCTTAATCTCCATCTAA+TGG + chr3_2:81607821-81607840 Msa0430040:intron 30.0%
CTCAAGATTAGAAAGCAAAA+TGG - chr3_2:81608363-81608382 None:intergenic 30.0%
!! AGAACAGGTAGAATTTTAAC+GGG - chr3_2:81608461-81608480 None:intergenic 30.0%
! CAGAACAGGTAGAATTTTAA+CGG - chr3_2:81608462-81608481 None:intergenic 30.0%
ATGAAACTGTCTGCATATAA+TGG - chr3_2:81608695-81608714 None:intergenic 30.0%
TAGTACAAGAAAAATGGAAG+GGG - chr3_2:81608826-81608845 None:intergenic 30.0%
!! TAGCTAGCAGACTATTTTAA+AGG + chr3_2:81608856-81608875 Msa0430040:three_prime_UTR 30.0%
!!! ATTTTTGGAATTCAGAAGAG+TGG + chr3_2:81608900-81608919 Msa0430040:three_prime_UTR 30.0%
GTTGCAAAATACTGAAGACA+TGG + chr3_2:81599839-81599858 Msa0430040:exon 35.0%
CGAGAAGAACGAAAAGAAAA+AGG - chr3_2:81599918-81599937 None:intergenic 35.0%
!!! GTTTTTGGAGTAGAAAGGAA+TGG - chr3_2:81599952-81599971 None:intergenic 35.0%
!!! GGTTTGTTTTTGGAGTAGAA+AGG - chr3_2:81599957-81599976 None:intergenic 35.0%
!!! AAGCAACTGTGGTTTGTTTT+TGG - chr3_2:81599967-81599986 None:intergenic 35.0%
! AGAAGAAGAAGCTACTTTGA+GGG - chr3_2:81600009-81600028 None:intergenic 35.0%
! AAGAAGAAGAAGCTACTTTG+AGG - chr3_2:81600010-81600029 None:intergenic 35.0%
GAAGCTCAAAACAATTTGCA+AGG + chr3_2:81600035-81600054 Msa0430040:CDS 35.0%
AAACAATTTGCAAGGGAAAC+CGG + chr3_2:81600043-81600062 Msa0430040:CDS 35.0%
TTCTACTTCCTCTTGTTGAT+AGG - chr3_2:81600117-81600136 None:intergenic 35.0%
! GTACTGATGAACAAGATAAG+TGG + chr3_2:81600147-81600166 Msa0430040:CDS 35.0%
!! AACAAGATAAGTGGGTTGAT+TGG + chr3_2:81600156-81600175 Msa0430040:CDS 35.0%
!! ACAAGATAAGTGGGTTGATT+GGG + chr3_2:81600157-81600176 Msa0430040:CDS 35.0%
! TGATTGGGAAGATCAGATTT+TGG + chr3_2:81600172-81600191 Msa0430040:CDS 35.0%
AACAAAACCAACCAAAGGAA+CGG - chr3_2:81600204-81600223 None:intergenic 35.0%
GTTCTAACAAAACCAACCAA+AGG - chr3_2:81600209-81600228 None:intergenic 35.0%
GTTAGAACAATCCTTCATTC+TGG + chr3_2:81600221-81600240 Msa0430040:CDS 35.0%
!! GGTGTTGATTTCATGTTGAA+TGG + chr3_2:81600390-81600409 Msa0430040:intron 35.0%
ATACACTCATATGTTAGAGC+TGG - chr3_2:81600677-81600696 None:intergenic 35.0%
TTTACTGCCCTCAAATTTAG+TGG - chr3_2:81600734-81600753 None:intergenic 35.0%
CATCTCTTAGAAATTGAGGT+TGG - chr3_2:81601145-81601164 None:intergenic 35.0%
! CTTGAACAAATCCGTTTTGT+GGG + chr3_2:81601180-81601199 Msa0430040:intron 35.0%
! TTGAACAAATCCGTTTTGTG+GGG + chr3_2:81601181-81601200 Msa0430040:intron 35.0%
CTTCTCTTAGAAATTGAGGT+TGG - chr3_2:81601218-81601237 None:intergenic 35.0%
AAAGGTTGTATGCAATACCT+GGG + chr3_2:81601341-81601360 Msa0430040:intron 35.0%
ATACATAAAACCATGGACGA+CGG - chr3_2:81601447-81601466 None:intergenic 35.0%
!!! CCAATCTTTTTCTGAGATTC+AGG - chr3_2:81601737-81601756 None:intergenic 35.0%
CCTGAATCTCAGAAAAAGAT+TGG + chr3_2:81601734-81601753 Msa0430040:CDS 35.0%
TCTCAGAAAAAGATTGGATG+TGG + chr3_2:81601740-81601759 Msa0430040:CDS 35.0%
AAGGGTAAAATCCTTTCAGT+AGG - chr3_2:81601929-81601948 None:intergenic 35.0%
ATAGGATTTGCCTTCAAAAG+TGG + chr3_2:81602000-81602019 Msa0430040:intron 35.0%
TAGGATTTGCCTTCAAAAGT+GGG + chr3_2:81602001-81602020 Msa0430040:intron 35.0%
CTTGCACTTTAACCAGTTAT+TGG - chr3_2:81602030-81602049 None:intergenic 35.0%
AAGTGCAAGTTGTTAGCTAT+TGG + chr3_2:81602041-81602060 Msa0430040:intron 35.0%
! TCGCATGAGTTTTCATAAAC+TGG - chr3_2:81602123-81602142 None:intergenic 35.0%
ACTGTGCAAACTACCAAATT+AGG - chr3_2:81602232-81602251 None:intergenic 35.0%
TATTTGTTCCTCTGTATGCA+CGG + chr3_2:81602418-81602437 Msa0430040:intron 35.0%
TTTGTGTATATCATCTCCAC+AGG + chr3_2:81602650-81602669 Msa0430040:intron 35.0%
TTGTGTATATCATCTCCACA+GGG + chr3_2:81602651-81602670 Msa0430040:intron 35.0%
TAGAAATAACGGTATCGCTT+TGG - chr3_2:81602918-81602937 None:intergenic 35.0%
TTTCAGATACTTAATCAGGC+TGG - chr3_2:81603016-81603035 None:intergenic 35.0%
CATCTACTCTTGTAGTATTG+AGG - chr3_2:81603266-81603285 None:intergenic 35.0%
AAACACAAAGCAAGTGGTTT+AGG - chr3_2:81603391-81603410 None:intergenic 35.0%
! GCTTTGTGTTTCTCTAGAAA+TGG + chr3_2:81603400-81603419 Msa0430040:intron 35.0%
AACTAGGTCACTTAAAAAGG+AGG - chr3_2:81603595-81603614 None:intergenic 35.0%
CATTCTTTCTTCCTTTCTCT+CGG + chr3_2:81603615-81603634 Msa0430040:intron 35.0%
ATTCTTTCTTCCTTTCTCTC+GGG + chr3_2:81603616-81603635 Msa0430040:intron 35.0%
TGTGACACTTTGTAGTGTAA+TGG - chr3_2:81603746-81603765 None:intergenic 35.0%
ACGGTTAGATGAAATAAGGA+AGG - chr3_2:81603769-81603788 None:intergenic 35.0%
GTCAACGGTTAGATGAAATA+AGG - chr3_2:81603773-81603792 None:intergenic 35.0%
TAGTGTATTAGTGTGGTCAA+CGG - chr3_2:81603788-81603807 None:intergenic 35.0%
!! ACACGTTATTTTCCTAGCAA+AGG + chr3_2:81604042-81604061 Msa0430040:intron 35.0%
!! AACATTTGCTATCTGCATAC+AGG - chr3_2:81604077-81604096 None:intergenic 35.0%
TGCAGATAGCAAATGTTAGA+TGG + chr3_2:81604080-81604099 Msa0430040:intron 35.0%
GAAATAATGCAACTATGGGA+AGG - chr3_2:81604197-81604216 None:intergenic 35.0%
TCCCATAGTTGCATTATTTC+TGG + chr3_2:81604197-81604216 Msa0430040:intron 35.0%
CCCAGAAATAATGCAACTAT+GGG - chr3_2:81604201-81604220 None:intergenic 35.0%
! CCCATAGTTGCATTATTTCT+GGG + chr3_2:81604198-81604217 Msa0430040:intron 35.0%
!! CCATAGTTGCATTATTTCTG+GGG + chr3_2:81604199-81604218 Msa0430040:intron 35.0%
TTTAACTAGGTCGGAACAAA+AGG - chr3_2:81604287-81604306 None:intergenic 35.0%
! TTTTGTTCCGACCTAGTTAA+AGG + chr3_2:81604286-81604305 Msa0430040:intron 35.0%
TACAACCATTAGATTAGCAC+TGG + chr3_2:81604413-81604432 Msa0430040:intron 35.0%
CTAAACACGCTAGAAAGATA+GGG - chr3_2:81604874-81604893 None:intergenic 35.0%
TCTAAACACGCTAGAAAGAT+AGG - chr3_2:81604875-81604894 None:intergenic 35.0%
AAAGTGATTCTGAACACAGT+AGG - chr3_2:81604922-81604941 None:intergenic 35.0%
TTTATATCCGAATTGTGGTC+TGG + chr3_2:81605103-81605122 Msa0430040:intron 35.0%
GCTTAACAGAAATTTGGTCT+CGG + chr3_2:81605137-81605156 Msa0430040:intron 35.0%
TTTCATAGTGAAGATTGGGA+AGG - chr3_2:81605186-81605205 None:intergenic 35.0%
! AACATAGTTTGGAGCAGAAT+AGG - chr3_2:81605628-81605647 None:intergenic 35.0%
TATTCTGCTCCAAACTATGT+TGG + chr3_2:81605627-81605646 Msa0430040:intron 35.0%
TACTCATCTCCAACATAGTT+TGG - chr3_2:81605639-81605658 None:intergenic 35.0%
CTATGTTGGAGATGAGTATT+AGG + chr3_2:81605641-81605660 Msa0430040:intron 35.0%
AGATTTGAAAAGGATCATCG+AGG - chr3_2:81605677-81605696 None:intergenic 35.0%
! CGATGATCCTTTTCAAATCT+AGG + chr3_2:81605677-81605696 Msa0430040:intron 35.0%
AGGTAGACCTAGATTTGAAA+AGG - chr3_2:81605687-81605706 None:intergenic 35.0%
!! GGTTGATTCTTTGTTTCTGA+GGG - chr3_2:81605785-81605804 None:intergenic 35.0%
!! TGGTTGATTCTTTGTTTCTG+AGG - chr3_2:81605786-81605805 None:intergenic 35.0%
GGTTGGCAATTCTAATAAGA+TGG - chr3_2:81605806-81605825 None:intergenic 35.0%
TCTTATTAGAATTGCCAACC+TGG + chr3_2:81605806-81605825 Msa0430040:intron 35.0%
ACAAACCAGTTTCTCTGATT+TGG + chr3_2:81605858-81605877 Msa0430040:intron 35.0%
AAATGCCAATTAAGTACCTG+TGG + chr3_2:81605995-81606014 Msa0430040:intron 35.0%
AATGCCAATTAAGTACCTGT+GGG + chr3_2:81605996-81606015 Msa0430040:intron 35.0%
! AGAAATTTGAGACTTTGCTG+AGG + chr3_2:81606045-81606064 Msa0430040:intron 35.0%
! GGGAGGTTATTCACATTTTA+TGG - chr3_2:81606078-81606097 None:intergenic 35.0%
TGCTGTATTGCCTTTACTAA+GGG + chr3_2:81606117-81606136 Msa0430040:intron 35.0%
! AGAGTTGATTCCCTTAGTAA+AGG - chr3_2:81606130-81606149 None:intergenic 35.0%
AAATTTAGCATAGCCAACAC+CGG + chr3_2:81606305-81606324 Msa0430040:intron 35.0%
!! AACATGCTTTTGAGTACACT+GGG - chr3_2:81606379-81606398 None:intergenic 35.0%
!! AAACATGCTTTTGAGTACAC+TGG - chr3_2:81606380-81606399 None:intergenic 35.0%
TCTTGACATGCTAATATCAG+CGG - chr3_2:81606454-81606473 None:intergenic 35.0%
AAGACCAATAATCCACCATA+AGG + chr3_2:81606470-81606489 Msa0430040:intron 35.0%
!! AAAGCCTTATGGTGGATTAT+TGG - chr3_2:81606477-81606496 None:intergenic 35.0%
AGATTGGAGTTCACTTTACA+TGG + chr3_2:81606520-81606539 Msa0430040:intron 35.0%
GATTGGAGTTCACTTTACAT+GGG + chr3_2:81606521-81606540 Msa0430040:intron 35.0%
AATCACATCATATACAAGGC+GGG - chr3_2:81606558-81606577 None:intergenic 35.0%
CAATCACATCATATACAAGG+CGG - chr3_2:81606559-81606578 None:intergenic 35.0%
! TCTACAATCTGTAAAAGTGC+TGG - chr3_2:81606617-81606636 None:intergenic 35.0%
TTCTTCAACATCTTGGTATG+TGG - chr3_2:81606698-81606717 None:intergenic 35.0%
ATTCACAGCACATTGAAATG+TGG + chr3_2:81606761-81606780 Msa0430040:intron 35.0%
TCAAATATGGATGCATGAGA+AGG - chr3_2:81606868-81606887 None:intergenic 35.0%
TCTCATGCATCCATATTTGA+TGG + chr3_2:81606868-81606887 Msa0430040:intron 35.0%
AACAGGTAAAACAAATCCAC+TGG + chr3_2:81607032-81607051 Msa0430040:intron 35.0%
TAATAATCCCTTGACCTTCA+TGG + chr3_2:81607104-81607123 Msa0430040:intron 35.0%
AATGACCGTATTTCAACCTA+AGG + chr3_2:81607332-81607351 Msa0430040:intron 35.0%
AGTGGGAAAACTATCCAAAT+AGG - chr3_2:81607471-81607490 None:intergenic 35.0%
ATACACTTTGCATGTTGCTA+AGG + chr3_2:81607522-81607541 Msa0430040:intron 35.0%
GAAAACCTATCTATAGCAGA+GGG - chr3_2:81607563-81607582 None:intergenic 35.0%
AGAAAACCTATCTATAGCAG+AGG - chr3_2:81607564-81607583 None:intergenic 35.0%
! TGCTATAGATAGGTTTTCTC+AGG + chr3_2:81607565-81607584 Msa0430040:intron 35.0%
ATGAATCAAACTGCTAGAGA+AGG - chr3_2:81607620-81607639 None:intergenic 35.0%
TCGAGCAAAGTAGTTGAATT+TGG - chr3_2:81607651-81607670 None:intergenic 35.0%
ACTATCATGGAATGAGAAGA+AGG - chr3_2:81607674-81607693 None:intergenic 35.0%
CTTCTCATTCCATGATAGTT+AGG + chr3_2:81607675-81607694 Msa0430040:intron 35.0%
TAGCCATTAGATGGAGATTA+AGG - chr3_2:81607827-81607846 None:intergenic 35.0%
CGAAATATGTAGCCATTAGA+TGG - chr3_2:81607836-81607855 None:intergenic 35.0%
! AAATGTCTGTGCTTTTACTG+GGG - chr3_2:81607947-81607966 None:intergenic 35.0%
! GAAATGTCTGTGCTTTTACT+GGG - chr3_2:81607948-81607967 None:intergenic 35.0%
! TGAAATGTCTGTGCTTTTAC+TGG - chr3_2:81607949-81607968 None:intergenic 35.0%
GCACAGACATTTCAAAATAG+TGG + chr3_2:81607955-81607974 Msa0430040:intron 35.0%
ATATAGAACACGGAACTACT+GGG - chr3_2:81608231-81608250 None:intergenic 35.0%
AATATAGAACACGGAACTAC+TGG - chr3_2:81608232-81608251 None:intergenic 35.0%
CAAATTAGAGTTAGAAAGCG+TGG - chr3_2:81608289-81608308 None:intergenic 35.0%
! TTCTAACTCTAATTTGCAGC+TGG + chr3_2:81608293-81608312 Msa0430040:intron 35.0%
GTAAGACACTTCCTTAAGTA+AGG - chr3_2:81608340-81608359 None:intergenic 35.0%
CGTTAAAATTCTACCTGTTC+TGG + chr3_2:81608460-81608479 Msa0430040:intron 35.0%
!!! TACCTGTTCTGGTTTTTCTT+CGG + chr3_2:81608471-81608490 Msa0430040:intron 35.0%
! TCGGGGTAATTATTTTCTTC+AGG + chr3_2:81608490-81608509 Msa0430040:intron 35.0%
! CGGGGTAATTATTTTCTTCA+GGG + chr3_2:81608491-81608510 Msa0430040:intron 35.0%
! AGCTGGTAGACTTTTCATAT+TGG + chr3_2:81608636-81608655 Msa0430040:CDS 35.0%
CTTTCTCAGTTATTGTTGCG+AGG - chr3_2:81599763-81599782 None:intergenic 40.0%
AAACGAGAATGAAGCAACTG+TGG - chr3_2:81599978-81599997 None:intergenic 40.0%
CCTTTACCTTGTGAAAGAAC+CGG - chr3_2:81600065-81600084 None:intergenic 40.0%
GTTCTTTCACAAGGTAAAGG+AGG + chr3_2:81600065-81600084 Msa0430040:CDS 40.0%
ACAAGGTAAAGGAGGAATTG+TGG + chr3_2:81600073-81600092 Msa0430040:CDS 40.0%
CAGCTATTCCTATCAACAAG+AGG + chr3_2:81600106-81600125 Msa0430040:CDS 40.0%
TTTGGAAGATACCGTTCCTT+TGG + chr3_2:81600190-81600209 Msa0430040:CDS 40.0%
GAACTTACTGTCCAGAATGA+AGG - chr3_2:81600235-81600254 None:intergenic 40.0%
ATTTCACGAAGGAAGCAACA+TGG - chr3_2:81600779-81600798 None:intergenic 40.0%
TGTATGCACTATGCGGTTAT+GGG - chr3_2:81600987-81601006 None:intergenic 40.0%
GGTCATCTCTCATCCAATTT+GGG - chr3_2:81601055-81601074 None:intergenic 40.0%
AGGTCATCTCTCATCCAATT+TGG - chr3_2:81601056-81601075 None:intergenic 40.0%
! GCTTGAACAAATCCGTTTTG+TGG + chr3_2:81601179-81601198 Msa0430040:intron 40.0%
! GCAAAAGAAACTGACTCATC+TGG - chr3_2:81601308-81601327 None:intergenic 40.0%
CAAAGGTTGTATGCAATACC+TGG + chr3_2:81601340-81601359 Msa0430040:intron 40.0%
TGGGCAATATAAAATGGCTG+CGG + chr3_2:81601360-81601379 Msa0430040:intron 40.0%
TAGTGCATGAAATCACAACG+AGG - chr3_2:81601643-81601662 None:intergenic 40.0%
!! TTCTGAGATTCAGGGTGAAA+TGG - chr3_2:81601728-81601747 None:intergenic 40.0%
GCAATCTATCGGATTAAGCA+CGG + chr3_2:81601891-81601910 Msa0430040:intron 40.0%
AGGATTTGCCTTCAAAAGTG+GGG + chr3_2:81602002-81602021 Msa0430040:intron 40.0%
! GCATTTTGTTAAGTGTGGAG+TGG - chr3_2:81602169-81602188 None:intergenic 40.0%
!! ATTGGTATCCTCTAGAGTGT+GGG - chr3_2:81602194-81602213 None:intergenic 40.0%
AGGGATAGGCTACATAGAAA+GGG - chr3_2:81602365-81602384 None:intergenic 40.0%
TAAATGGCAAGGAAACCTGA+GGG - chr3_2:81602384-81602403 None:intergenic 40.0%
TTAAATGGCAAGGAAACCTG+AGG - chr3_2:81602385-81602404 None:intergenic 40.0%
ACTATCATCCATCCCAATAG+CGG + chr3_2:81602481-81602500 Msa0430040:intron 40.0%
ACCTATCATCCCGAATTTGA+TGG - chr3_2:81602587-81602606 None:intergenic 40.0%
GAAATTGCAGTTGTTACGCT+TGG - chr3_2:81602826-81602845 None:intergenic 40.0%
ATACTTAATCAGGCTGGACA+CGG - chr3_2:81603010-81603029 None:intergenic 40.0%
GATTCAACTCAAGATCGCTT+TGG - chr3_2:81603364-81603383 None:intergenic 40.0%
CTAGAGAAACACAAAGCAAG+TGG - chr3_2:81603397-81603416 None:intergenic 40.0%
! GAGAGCAAAACCACGTTTTA+GGG - chr3_2:81603505-81603524 None:intergenic 40.0%
! AGAGAGCAAAACCACGTTTT+AGG - chr3_2:81603506-81603525 None:intergenic 40.0%
! ACCAATGTCCAATGGGTTTA+AGG + chr3_2:81603641-81603660 Msa0430040:intron 40.0%
GAGTAACTTTCAGAAGGAGT+CGG - chr3_2:81603977-81603996 None:intergenic 40.0%
TATCTACACGACCACTAAGA+TGG + chr3_2:81604130-81604149 Msa0430040:intron 40.0%
CCCCAGAAATAATGCAACTA+TGG - chr3_2:81604202-81604221 None:intergenic 40.0%
!! TTGCATTATTTCTGGGGAAG+AGG + chr3_2:81604205-81604224 Msa0430040:intron 40.0%
! ATTTTCCAGTGGAGCAACTA+TGG - chr3_2:81604233-81604252 None:intergenic 40.0%
GCACAATCCTTTAACTAGGT+CGG - chr3_2:81604296-81604315 None:intergenic 40.0%
ATAAGTGTGACTGAATCCTG+AGG + chr3_2:81604325-81604344 Msa0430040:intron 40.0%
TAAGTGTGACTGAATCCTGA+GGG + chr3_2:81604326-81604345 Msa0430040:intron 40.0%
TCTACGAGTTTCATCCAACT+TGG - chr3_2:81604361-81604380 None:intergenic 40.0%
GAAACAAGATGGCTCACAAA+GGG - chr3_2:81604733-81604752 None:intergenic 40.0%
AGAAACAAGATGGCTCACAA+AGG - chr3_2:81604734-81604753 None:intergenic 40.0%
GCAGCACAATAGAAACAAGA+TGG - chr3_2:81604744-81604763 None:intergenic 40.0%
TTCTGAACACAGTAGGAAGA+TGG - chr3_2:81604915-81604934 None:intergenic 40.0%
! TTTTTGTCTCAGGTGCAGTT+TGG + chr3_2:81605041-81605060 Msa0430040:intron 40.0%
GTCTGTAACAAGCTTAAGTG+TGG + chr3_2:81605242-81605261 Msa0430040:intron 40.0%
AAAGGATCATCGAGGATCTA+AGG - chr3_2:81605669-81605688 None:intergenic 40.0%
! TCATATAGTGGAGGAAGTCA+AGG - chr3_2:81605707-81605726 None:intergenic 40.0%
AAGGTTTAGGAATATCCTGC+AGG + chr3_2:81605743-81605762 Msa0430040:intron 40.0%
! GTTTCTGAGGGATGACAAAT+AGG - chr3_2:81605773-81605792 None:intergenic 40.0%
CTACACCAAATCAGAGAAAC+TGG - chr3_2:81605866-81605885 None:intergenic 40.0%
GAAACGGAAGAATGATCCTT+GGG - chr3_2:81605933-81605952 None:intergenic 40.0%
TGAAACGGAAGAATGATCCT+TGG - chr3_2:81605934-81605953 None:intergenic 40.0%
CATTCTTCCGTTTCACCATA+AGG + chr3_2:81605939-81605958 Msa0430040:intron 40.0%
CAGATCACCTTATGGTGAAA+CGG - chr3_2:81605949-81605968 None:intergenic 40.0%
GAGTGGCTTCAATTCAATGA+AGG + chr3_2:81605971-81605990 Msa0430040:intron 40.0%
TAGTAAAGGCAATACAGCAC+TGG - chr3_2:81606116-81606135 None:intergenic 40.0%
GTGCTGTATTGCCTTTACTA+AGG + chr3_2:81606116-81606135 Msa0430040:intron 40.0%
TTGGAGTTATTGCACAAGGT+AGG - chr3_2:81606230-81606249 None:intergenic 40.0%
GTCATTGGAGTTATTGCACA+AGG - chr3_2:81606234-81606253 None:intergenic 40.0%
! GGTAGCAGAAACGACATTTT+AGG - chr3_2:81606357-81606376 None:intergenic 40.0%
!! ACATGCTTTTGAGTACACTG+GGG - chr3_2:81606378-81606397 None:intergenic 40.0%
TTCTTCGACAATCATGTCAC+AGG + chr3_2:81606398-81606417 Msa0430040:intron 40.0%
! GAACAGTAAAAGCCTTATGG+TGG - chr3_2:81606485-81606504 None:intergenic 40.0%
ATCACATCATATACAAGGCG+GGG - chr3_2:81606557-81606576 None:intergenic 40.0%
TATGATGTGATTGAGAGTCC+CGG + chr3_2:81606566-81606585 Msa0430040:intron 40.0%
!! ATCTGTAAAAGTGCTGGTTC+AGG - chr3_2:81606611-81606630 None:intergenic 40.0%
AGCACAGATTTCCATAAGAG+AGG + chr3_2:81606725-81606744 Msa0430040:intron 40.0%
GCACAGATTTCCATAAGAGA+GGG + chr3_2:81606726-81606745 Msa0430040:intron 40.0%
TTGAAATGTGGCTGGTACAT+TGG + chr3_2:81606773-81606792 Msa0430040:intron 40.0%
GGTACATTGGTCAATCTGAA+CGG + chr3_2:81606786-81606805 Msa0430040:intron 40.0%
TGTAATGCCTATGTTGAGGT+CGG + chr3_2:81606823-81606842 Msa0430040:intron 40.0%
!! TTGAGGTCGGAATCTTGTTT+TGG + chr3_2:81606836-81606855 Msa0430040:intron 40.0%
!!! TGAGGTCGGAATCTTGTTTT+GGG + chr3_2:81606837-81606856 Msa0430040:intron 40.0%
GGGCAAGTTACCATCAAATA+TGG - chr3_2:81606881-81606900 None:intergenic 40.0%
ACGCAGTGGGTAAATTACAT+GGG - chr3_2:81606932-81606951 None:intergenic 40.0%
AACGCAGTGGGTAAATTACA+TGG - chr3_2:81606933-81606952 None:intergenic 40.0%
CTGTTATAGAAGAACGCAGT+GGG - chr3_2:81606945-81606964 None:intergenic 40.0%
CACTGCGTTCTTCTATAACA+GGG + chr3_2:81606944-81606963 Msa0430040:intron 40.0%
ACCATCATACTGAGTGCATT+GGG - chr3_2:81607000-81607019 None:intergenic 40.0%
! CAGTATGATGGTGTACTAAG+AGG + chr3_2:81607008-81607027 Msa0430040:intron 40.0%
ATGGTGTACTAAGAGGTAAC+AGG + chr3_2:81607015-81607034 Msa0430040:intron 40.0%
!!! CTGGTTTTGATAGAAAGCCA+AGG - chr3_2:81607075-81607094 None:intergenic 40.0%
! CTTGGCTTTCTATCAAAACC+AGG + chr3_2:81607073-81607092 Msa0430040:intron 40.0%
GTTCAACATGAGGAAAATCC+CGG - chr3_2:81607137-81607156 None:intergenic 40.0%
GATCTCACAGTCAATGAACA+CGG - chr3_2:81607252-81607271 None:intergenic 40.0%
CATTTCAAGACTCTTGTCTC+TGG + chr3_2:81607284-81607303 Msa0430040:intron 40.0%
!! GGGTTCCTTAGGTTGAAATA+CGG - chr3_2:81607340-81607359 None:intergenic 40.0%
!! TGGCTCAGATGTACTAGTTT+TGG + chr3_2:81607400-81607419 Msa0430040:intron 40.0%
!!! TGTACTAGTTTTGGACTCCT+CGG + chr3_2:81607409-81607428 Msa0430040:intron 40.0%
! TGGATAGTTTTCCCACTTCT+TGG + chr3_2:81607474-81607493 Msa0430040:intron 40.0%
! TAGTTTTCCCACTTCTTGGT+TGG + chr3_2:81607478-81607497 Msa0430040:intron 40.0%
GGATTATCCAACCAAGAAGT+GGG - chr3_2:81607488-81607507 None:intergenic 40.0%
AGGATTATCCAACCAAGAAG+TGG - chr3_2:81607489-81607508 None:intergenic 40.0%
ATGAACCCTCTGCTATAGAT+AGG + chr3_2:81607555-81607574 Msa0430040:intron 40.0%
TGCTAGAGAAGGCAAAATGA+AGG - chr3_2:81607609-81607628 None:intergenic 40.0%
TGTAGGGATACATTCTCCTT+GGG - chr3_2:81607772-81607791 None:intergenic 40.0%
ATGTAGGGATACATTCTCCT+TGG - chr3_2:81607773-81607792 None:intergenic 40.0%
AGAAGGACGAAAGAATATGC+TGG - chr3_2:81607868-81607887 None:intergenic 40.0%
!! GGGTTGATACTTGATAGTGT+AGG - chr3_2:81607925-81607944 None:intergenic 40.0%
! AATGTCTGTGCTTTTACTGG+GGG - chr3_2:81607946-81607965 None:intergenic 40.0%
GATACTAATGTGTCCGACAT+AGG - chr3_2:81607993-81608012 None:intergenic 40.0%
ATGTCGGACACATTAGTATC+AGG + chr3_2:81607993-81608012 Msa0430040:intron 40.0%
CCTTAAGTAAGGTAACACCA+TGG - chr3_2:81608329-81608348 None:intergenic 40.0%
!! CCATGGTGTTACCTTACTTA+AGG + chr3_2:81608326-81608345 Msa0430040:intron 40.0%
ACAGAGCAGAAGTGAACAAT+TGG - chr3_2:81608390-81608409 None:intergenic 40.0%
!!! ACCTGTTCTGGTTTTTCTTC+GGG + chr3_2:81608472-81608491 Msa0430040:intron 40.0%
TAGAGCGATCAAAATTGGGA+TGG - chr3_2:81608586-81608605 None:intergenic 40.0%
!! ATCCCAATTTTGATCGCTCT+AGG + chr3_2:81608585-81608604 Msa0430040:CDS 40.0%
CACCTAGAGCGATCAAAATT+GGG - chr3_2:81608590-81608609 None:intergenic 40.0%
ACACCTAGAGCGATCAAAAT+TGG - chr3_2:81608591-81608610 None:intergenic 40.0%
ATGTTCATAGTGCGACAAGA+TGG + chr3_2:81608611-81608630 Msa0430040:CDS 40.0%
ATGCAGACAGTTTCATTCTC+AGG + chr3_2:81608699-81608718 Msa0430040:CDS 40.0%
TAATGTTGGCAAAGATCGCG+AGG + chr3_2:81599725-81599744 Msa0430040:five_prime_UTR 45.0%
AATGTTGGCAAAGATCGCGA+GGG + chr3_2:81599726-81599745 Msa0430040:five_prime_UTR 45.0%
TCTCAGTTATTGTTGCGAGG+TGG - chr3_2:81599760-81599779 None:intergenic 45.0%
CCGGTTCTTTCACAAGGTAA+AGG + chr3_2:81600062-81600081 Msa0430040:CDS 45.0%
AGGTAAAGGAGGAATTGTGG+AGG + chr3_2:81600076-81600095 Msa0430040:CDS 45.0%
GAAGATACCGTTCCTTTGGT+TGG + chr3_2:81600194-81600213 Msa0430040:CDS 45.0%
! GTGATTGGCGTCATGTTTTG+AGG - chr3_2:81600703-81600722 None:intergenic 45.0%
GTATGCACTATGCGGTTATG+GGG - chr3_2:81600986-81601005 None:intergenic 45.0%
CTGTATGCACTATGCGGTTA+TGG - chr3_2:81600988-81601007 None:intergenic 45.0%
TAACCGCATAGTGCATACAG+AGG + chr3_2:81600988-81601007 Msa0430040:intron 45.0%
AACCGCATAGTGCATACAGA+GGG + chr3_2:81600989-81601008 Msa0430040:intron 45.0%
AACCCTCTGTATGCACTATG+CGG - chr3_2:81600994-81601013 None:intergenic 45.0%
CTAACACAACCCCACAAAAC+CGG - chr3_2:81601120-81601139 None:intergenic 45.0%
TCCAACACAACCCCACAAAA+CGG - chr3_2:81601194-81601213 None:intergenic 45.0%
TGCTTGAAATGGCCTCTTCT+TGG + chr3_2:81601251-81601270 Msa0430040:intron 45.0%
CAGTCATGTTCACCAAGAAG+AGG - chr3_2:81601266-81601285 None:intergenic 45.0%
!! GCAGCCATTTTATATTGCCC+AGG - chr3_2:81601361-81601380 None:intergenic 45.0%
AAAATGGCTGCGGCAATATC+AGG + chr3_2:81601370-81601389 Msa0430040:intron 45.0%
CGGCAATATCAGGACTGTAT+TGG + chr3_2:81601380-81601399 Msa0430040:intron 45.0%
TGCAGTGAAGATGGGAAAGA+AGG + chr3_2:81601478-81601497 Msa0430040:intron 45.0%
GCAGTGAAGATGGGAAAGAA+GGG + chr3_2:81601479-81601498 Msa0430040:intron 45.0%
! CAATGGTTTTCTCGTGCTCT+GGG - chr3_2:81601691-81601710 None:intergenic 45.0%
! ACAATGGTTTTCTCGTGCTC+TGG - chr3_2:81601692-81601711 None:intergenic 45.0%
TGGAAGGAGCTTCTCAACAA+TGG - chr3_2:81601708-81601727 None:intergenic 45.0%
GAGATTCAGGGTGAAATGGA+AGG - chr3_2:81601724-81601743 None:intergenic 45.0%
ATCAGCTGTTGCCTACTGAA+AGG + chr3_2:81601915-81601934 Msa0430040:intron 45.0%
!! TATTGGGACCCCACTTTTGA+AGG - chr3_2:81602013-81602032 None:intergenic 45.0%
AAAAGTGGGGTCCCAATAAC+TGG + chr3_2:81602015-81602034 Msa0430040:intron 45.0%
CAAGTTGTTAGCTATTGGCG+AGG + chr3_2:81602046-81602065 Msa0430040:intron 45.0%
! GGGGTGCATTTTGTTAAGTG+TGG - chr3_2:81602174-81602193 None:intergenic 45.0%
!! TTGGTATCCTCTAGAGTGTG+GGG - chr3_2:81602193-81602212 None:intergenic 45.0%
!! GATTGGTATCCTCTAGAGTG+TGG - chr3_2:81602195-81602214 None:intergenic 45.0%
GGATAGGCTACATAGAAAGG+GGG - chr3_2:81602363-81602382 None:intergenic 45.0%
GGGATAGGCTACATAGAAAG+GGG - chr3_2:81602364-81602383 None:intergenic 45.0%
GAGGGATAGGCTACATAGAA+AGG - chr3_2:81602366-81602385 None:intergenic 45.0%
TTCTATGTAGCCTATCCCTC+AGG + chr3_2:81602366-81602385 Msa0430040:intron 45.0%
CTATCATCCATCCCAATAGC+GGG + chr3_2:81602482-81602501 Msa0430040:intron 45.0%
CTTCTGAGTAGCCCAAAGTT+CGG - chr3_2:81602515-81602534 None:intergenic 45.0%
CTCAGTCTGGCCATCAAATT+CGG + chr3_2:81602574-81602593 Msa0430040:intron 45.0%
TCAGTCTGGCCATCAAATTC+GGG + chr3_2:81602575-81602594 Msa0430040:intron 45.0%
GCCATCAAATTCGGGATGAT+AGG + chr3_2:81602583-81602602 Msa0430040:intron 45.0%
AGAGATAGGACCATTTCGCT+TGG + chr3_2:81602784-81602803 Msa0430040:intron 45.0%
GAGATAGGACCATTTCGCTT+GGG + chr3_2:81602785-81602804 Msa0430040:intron 45.0%
! GTTTTGCATCCATGGAACAG+AGG - chr3_2:81603461-81603480 None:intergenic 45.0%
! AGCTTCACGTTTTGCATCCA+TGG - chr3_2:81603469-81603488 None:intergenic 45.0%
CAAAACGTGAAGCTCTTGTG+CGG + chr3_2:81603475-81603494 Msa0430040:intron 45.0%
! TCCTTCTCCTTTTGTGTGTG+CGG + chr3_2:81603549-81603568 Msa0430040:intron 45.0%
GCCTTAAACCCATTGGACAT+TGG - chr3_2:81603645-81603664 None:intergenic 45.0%
CAAATGGGCCTTAAACCCAT+TGG - chr3_2:81603652-81603671 None:intergenic 45.0%
!! TCAGAAGGAGTCGGTTTGTT+GGG - chr3_2:81603968-81603987 None:intergenic 45.0%
!! TTCAGAAGGAGTCGGTTTGT+TGG - chr3_2:81603969-81603988 None:intergenic 45.0%
AGGTCACAAAGACCTTTGCT+AGG - chr3_2:81604057-81604076 None:intergenic 45.0%
AGTTGCTCCACTGGAAAATG+TGG + chr3_2:81604234-81604253 Msa0430040:intron 45.0%
! CATCTTGCCACATTTTCCAG+TGG - chr3_2:81604244-81604263 None:intergenic 45.0%
TGAAACTCGTAGAGTAGCCA+TGG + chr3_2:81604368-81604387 Msa0430040:intron 45.0%
GGCTACCAGTGCTAATCTAA+TGG - chr3_2:81604421-81604440 None:intergenic 45.0%
ACACAGTAGGAAGATGGCAT+GGG - chr3_2:81604909-81604928 None:intergenic 45.0%
AACACAGTAGGAAGATGGCA+TGG - chr3_2:81604910-81604929 None:intergenic 45.0%
CTGAGAGATCTCAAACACAG+TGG - chr3_2:81604997-81605016 None:intergenic 45.0%
! TGTGGTAAGCTTTAGCTCGA+GGG + chr3_2:81605260-81605279 Msa0430040:intron 45.0%
TATGACATTGCGTACCAGGT+TGG - chr3_2:81605823-81605842 None:intergenic 45.0%
TGAGTATGACATTGCGTACC+AGG - chr3_2:81605827-81605846 None:intergenic 45.0%
CCACTCTACAGATCACCTTA+TGG - chr3_2:81605957-81605976 None:intergenic 45.0%
CCATAAGGTGATCTGTAGAG+TGG + chr3_2:81605954-81605973 Msa0430040:intron 45.0%
ACAGCCCACAGGTACTTAAT+TGG - chr3_2:81606003-81606022 None:intergenic 45.0%
! AATTAAGTACCTGTGGGCTG+TGG + chr3_2:81606002-81606021 Msa0430040:intron 45.0%
ACTGGCAGTCATACTTGCTT+GGG - chr3_2:81606098-81606117 None:intergenic 45.0%
TCATGCATGATGCACCTACT+TGG + chr3_2:81606153-81606172 Msa0430040:intron 45.0%
ATGATGCACCTACTTGGAGA+CGG + chr3_2:81606159-81606178 Msa0430040:intron 45.0%
ACAAGCTGTCACTACATTGC+CGG - chr3_2:81606327-81606346 None:intergenic 45.0%
CTTAACTAGCCAGCTCAGAT+TGG + chr3_2:81606504-81606523 Msa0430040:intron 45.0%
AAGTGAACTCCAATCTGAGC+TGG - chr3_2:81606516-81606535 None:intergenic 45.0%
TATACAAGGCGGGGTTACTA+TGG - chr3_2:81606548-81606567 None:intergenic 45.0%
ATGATGTGATTGAGAGTCCC+GGG + chr3_2:81606567-81606586 Msa0430040:intron 45.0%
TTTCCATAAGAGAGGGATGC+AGG + chr3_2:81606733-81606752 Msa0430040:intron 45.0%
ACAGCACATTGAAATGTGGC+TGG + chr3_2:81606765-81606784 Msa0430040:intron 45.0%
CAAGATTCCGACCTCAACAT+AGG - chr3_2:81606833-81606852 None:intergenic 45.0%
CCTGTTATAGAAGAACGCAG+TGG - chr3_2:81606946-81606965 None:intergenic 45.0%
CCACTGCGTTCTTCTATAAC+AGG + chr3_2:81606943-81606962 Msa0430040:intron 45.0%
ACAGGGATTGCATACTTACC+TGG + chr3_2:81606961-81606980 Msa0430040:intron 45.0%
CCATCATACTGAGTGCATTG+GGG - chr3_2:81606999-81607018 None:intergenic 45.0%
CACCATCATACTGAGTGCAT+TGG - chr3_2:81607001-81607020 None:intergenic 45.0%
ATCCCTTGACCTTCATGGTT+TGG + chr3_2:81607109-81607128 Msa0430040:intron 45.0%
TCCCTTGACCTTCATGGTTT+GGG + chr3_2:81607110-81607129 Msa0430040:intron 45.0%
!! TTCACACAGAGAGTGCCATT+TGG - chr3_2:81607175-81607194 None:intergenic 45.0%
TGAACTCCTCCCTTTGACAA+TGG + chr3_2:81607191-81607210 Msa0430040:intron 45.0%
TGGACGACTCCATTGTCAAA+GGG - chr3_2:81607203-81607222 None:intergenic 45.0%
ATGGACGACTCCATTGTCAA+AGG - chr3_2:81607204-81607223 None:intergenic 45.0%
ACTCTTGTCTCTGGCTGAAA+AGG + chr3_2:81607293-81607312 Msa0430040:intron 45.0%
TACGGTCATTGCTTATGTCG+TGG - chr3_2:81607322-81607341 None:intergenic 45.0%
TCAACCTAAGGAACCCATGA+CGG + chr3_2:81607344-81607363 Msa0430040:intron 45.0%
TATCACATCACGGTTTCCCA+AGG + chr3_2:81607753-81607772 Msa0430040:intron 45.0%
! GCAGGCGAAAAAAGTGTAGA+AGG - chr3_2:81607885-81607904 None:intergenic 45.0%
! ATGTCTGTGCTTTTACTGGG+GGG - chr3_2:81607945-81607964 None:intergenic 45.0%
TGTCCGACATAGGTATGACA+CGG - chr3_2:81607983-81608002 None:intergenic 45.0%
CGTGGATACAACGTGAGATA+CGG - chr3_2:81608271-81608290 None:intergenic 45.0%
!!! CCTGTTCTGGTTTTTCTTCG+GGG + chr3_2:81608473-81608492 Msa0430040:intron 45.0%
! TCTCTTTTCCTGCTGCAGAT+TGG + chr3_2:81608557-81608576 Msa0430040:intron 45.0%
GTTTCATTCTCAGGCACTTC+AGG + chr3_2:81608708-81608727 Msa0430040:CDS 45.0%
TAACAACTCACTAATCGCCG+CGG + chr3_2:81608931-81608950 Msa0430040:three_prime_UTR 45.0%
!!! ATAAATAATATAGAAATTTT+TGG + chr3_2:81608885-81608904 Msa0430040:three_prime_UTR 5.0%
! GGGAAACCGGTTCTTTCACA+AGG + chr3_2:81600056-81600075 Msa0430040:CDS 50.0%
!!! ACCTCACATGCCGGTTTTGT+GGG + chr3_2:81601107-81601126 Msa0430040:intron 50.0%
! TCCGTTTTGTGGGGTTGTGT+TGG + chr3_2:81601190-81601209 Msa0430040:intron 50.0%
AAATGCACCCCACACTCTAG+AGG + chr3_2:81602183-81602202 Msa0430040:intron 50.0%
! TCCATCCCAATAGCGGGAAT+CGG + chr3_2:81602488-81602507 Msa0430040:intron 50.0%
GTCTCTGATCCCAAGCGAAA+TGG - chr3_2:81602797-81602816 None:intergenic 50.0%
GGACACGAAGGATCTTGACA+TGG - chr3_2:81603343-81603362 None:intergenic 50.0%
! CAAGATCGCTTTGGACACGA+AGG - chr3_2:81603355-81603374 None:intergenic 50.0%
! GGCGGCAGCAACATCATTTT+GGG - chr3_2:81603440-81603459 None:intergenic 50.0%
! AGGCGGCAGCAACATCATTT+TGG - chr3_2:81603441-81603460 None:intergenic 50.0%
TTGCATCCATGGAACAGAGG+CGG - chr3_2:81603458-81603477 None:intergenic 50.0%
! ACATTGGTGACCCGAGAGAA+AGG - chr3_2:81603629-81603648 None:intergenic 50.0%
TCGGGTCACCAATGTCCAAT+GGG + chr3_2:81603634-81603653 Msa0430040:intron 50.0%
AAACACACGTGCAGCAAGCT+TGG - chr3_2:81603691-81603710 None:intergenic 50.0%
!! TCGGTTTGTTGGGTTGCAAG+AGG - chr3_2:81603958-81603977 None:intergenic 50.0%
GGGTTAGGACACCATCTTAG+TGG - chr3_2:81604144-81604163 None:intergenic 50.0%
AACAGGCTGTAGCGTACGAA+GGG - chr3_2:81604164-81604183 None:intergenic 50.0%
GTTTCATCCAACTTGGACCG+AGG - chr3_2:81604354-81604373 None:intergenic 50.0%
ACAAGATGGCTCACAAAGGG+TGG - chr3_2:81604730-81604749 None:intergenic 50.0%
! GTGTGGTAAGCTTTAGCTCG+AGG + chr3_2:81605259-81605278 Msa0430040:intron 50.0%
TGACAAATAGGTCGACCTGC+AGG - chr3_2:81605761-81605780 None:intergenic 50.0%
AGAGAGATGGGAACAGACAG+AGG - chr3_2:81605893-81605912 None:intergenic 50.0%
CTGTTCCCATCTCTCTCATG+AGG + chr3_2:81605897-81605916 Msa0430040:intron 50.0%
TCCCATCTCTCTCATGAGGA+TGG + chr3_2:81605901-81605920 Msa0430040:intron 50.0%
CCCATCCTCATGAGAGAGAT+GGG - chr3_2:81605905-81605924 None:intergenic 50.0%
CCCATCTCTCTCATGAGGAT+GGG + chr3_2:81605902-81605921 Msa0430040:intron 50.0%
TCCCATCCTCATGAGAGAGA+TGG - chr3_2:81605906-81605925 None:intergenic 50.0%
CACTGGCAGTCATACTTGCT+TGG - chr3_2:81606099-81606118 None:intergenic 50.0%
! CGATGCATGGGTTGAGGTTT+AGG - chr3_2:81606261-81606280 None:intergenic 50.0%
TGTCACTACATTGCCGGTGT+TGG - chr3_2:81606321-81606340 None:intergenic 50.0%
!! AAAAGTGCTGGTTCAGGACG+AGG - chr3_2:81606605-81606624 None:intergenic 50.0%
TGTCCTGCATCCCTCTCTTA+TGG - chr3_2:81606739-81606758 None:intergenic 50.0%
TTGGGGTAGGTGACAATTCC+AGG - chr3_2:81606982-81607001 None:intergenic 50.0%
CATACTGAGTGCATTGGGGT+AGG - chr3_2:81606995-81607014 None:intergenic 50.0%
CCCCAATGCACTCAGTATGA+TGG + chr3_2:81606996-81607015 Msa0430040:intron 50.0%
CCCCAAACCATGAAGGTCAA+GGG - chr3_2:81607114-81607133 None:intergenic 50.0%
CCCTTGACCTTCATGGTTTG+GGG + chr3_2:81607111-81607130 Msa0430040:intron 50.0%
ACGACTCCATTGTCAAAGGG+AGG - chr3_2:81607200-81607219 None:intergenic 50.0%
GGAGAGCGATTTCACGTGTA+TGG - chr3_2:81607223-81607242 None:intergenic 50.0%
AGTCAATGAACACGGAGGTG+AGG - chr3_2:81607244-81607263 None:intergenic 50.0%
CTCACAGTCAATGAACACGG+AGG - chr3_2:81607249-81607268 None:intergenic 50.0%
GGTCATTGCTTATGTCGTGG+AGG - chr3_2:81607319-81607338 None:intergenic 50.0%
CAACCTAAGGAACCCATGAC+GGG + chr3_2:81607345-81607364 Msa0430040:intron 50.0%
AACCTAAGGAACCCATGACG+GGG + chr3_2:81607346-81607365 Msa0430040:intron 50.0%
!!! AGTTTTGGACTCCTCGGACA+AGG + chr3_2:81607415-81607434 Msa0430040:intron 50.0%
! TGATAGTGTAGGCCCAACTG+AGG - chr3_2:81607914-81607933 None:intergenic 50.0%
GTGCCGTGTCATACCTATGT+CGG + chr3_2:81607977-81607996 Msa0430040:intron 50.0%
CAGCTGGTCAAATCAGTCCA+TGG + chr3_2:81608309-81608328 Msa0430040:intron 50.0%
CCCCGAAGAAAAACCAGAAC+AGG - chr3_2:81608476-81608495 None:intergenic 50.0%
TTCTCAGGCACTTCAGGAAG+CGG + chr3_2:81608714-81608733 Msa0430040:CDS 50.0%
GCAATCCTCACCTCACATGC+CGG + chr3_2:81601098-81601117 Msa0430040:intron 55.0%
CAAAACCGGCATGTGAGGTG+AGG - chr3_2:81601106-81601125 None:intergenic 55.0%
!!! CACCTCACATGCCGGTTTTG+TGG + chr3_2:81601106-81601125 Msa0430040:intron 55.0%
!!! CCTCACATGCCGGTTTTGTG+GGG + chr3_2:81601108-81601127 Msa0430040:intron 55.0%
TGGTCCAAACCCCACTGCAA+TGG + chr3_2:81601400-81601419 Msa0430040:intron 55.0%
GGTCCAAACCCCACTGCAAT+GGG + chr3_2:81601401-81601420 Msa0430040:intron 55.0%
!! CAATGGGCACTGGGCAAGTA+AGG + chr3_2:81601417-81601436 Msa0430040:intron 55.0%
GTAAGGCAATCCGTCGTCCA+TGG + chr3_2:81601434-81601453 Msa0430040:intron 55.0%
GGCAAGGAAACCTGAGGGAT+AGG - chr3_2:81602379-81602398 None:intergenic 55.0%
!! GAGAGTGTCCGTGCATACAG+AGG - chr3_2:81602429-81602448 None:intergenic 55.0%
! CCATCCCAATAGCGGGAATC+GGG + chr3_2:81602489-81602508 Msa0430040:intron 55.0%
AGAAGTGAAACAGTGCCCGC+AGG + chr3_2:81602530-81602549 Msa0430040:intron 55.0%
GAATATCGCGCTAGTCCCTG+TGG - chr3_2:81602669-81602688 None:intergenic 55.0%
! CGGTATCGCTTTGGACACGA+AGG - chr3_2:81602909-81602928 None:intergenic 55.0%
GCCGCACACACAAAAGGAGA+AGG - chr3_2:81603553-81603572 None:intergenic 55.0%
TAAGGGGCCGCACACACAAA+AGG - chr3_2:81603559-81603578 None:intergenic 55.0%
CTCGGGTCACCAATGTCCAA+TGG + chr3_2:81603633-81603652 Msa0430040:intron 55.0%
GCTGTAGCGTACGAAGGGTT+AGG - chr3_2:81604159-81604178 None:intergenic 55.0%
CAACAGGCTGTAGCGTACGA+AGG - chr3_2:81604165-81604184 None:intergenic 55.0%
CTTCGTACGCTACAGCCTGT+TGG + chr3_2:81604163-81604182 Msa0430040:intron 55.0%
GGGAAGGATTTCACGCCAAC+AGG - chr3_2:81604181-81604200 None:intergenic 55.0%
AGGCACCATAGTTGCTCCAC+TGG + chr3_2:81604225-81604244 Msa0430040:intron 55.0%
ACTGAATCCTGAGGGCTCCT+CGG + chr3_2:81604334-81604353 Msa0430040:intron 55.0%
AGAGTAGCCATGGTACCCAC+TGG + chr3_2:81604378-81604397 Msa0430040:intron 55.0%
GAGTAGCCATGGTACCCACT+GGG + chr3_2:81604379-81604398 Msa0430040:intron 55.0%
GTTGGGGCCAGACCACAATT+CGG - chr3_2:81605113-81605132 None:intergenic 55.0%
ATGAGGATGGGACTCTCCCA+AGG + chr3_2:81605914-81605933 Msa0430040:intron 55.0%
GGCAGTCATACTTGCTTGGG+AGG - chr3_2:81606095-81606114 None:intergenic 55.0%
ATGCACCTACTTGGAGACGG+AGG + chr3_2:81606162-81606181 Msa0430040:intron 55.0%
ACCTACTTGGAGACGGAGGA+TGG + chr3_2:81606166-81606185 Msa0430040:intron 55.0%
TCCATCCTCCGTCTCCAAGT+AGG - chr3_2:81606170-81606189 None:intergenic 55.0%
TACTTGGAGACGGAGGATGG+AGG + chr3_2:81606169-81606188 Msa0430040:intron 55.0%
TGAGGTTTAGGCGCGGTCAT+TGG - chr3_2:81606249-81606268 None:intergenic 55.0%
! CATGGGTTGAGGTTTAGGCG+CGG - chr3_2:81606256-81606275 None:intergenic 55.0%
AACCCATGCATCGCACTCGA+TGG + chr3_2:81606268-81606287 Msa0430040:intron 55.0%
CTCCATCGAGTGCGATGCAT+GGG - chr3_2:81606273-81606292 None:intergenic 55.0%
TCTCCATCGAGTGCGATGCA+TGG - chr3_2:81606274-81606293 None:intergenic 55.0%
GCATCGCACTCGATGGAGAA+TGG + chr3_2:81606275-81606294 Msa0430040:intron 55.0%
GCCCCAAACCATGAAGGTCA+AGG - chr3_2:81607115-81607134 None:intergenic 55.0%
! TGACCTTCATGGTTTGGGGC+CGG + chr3_2:81607115-81607134 Msa0430040:intron 55.0%
TTCCCCGTCATGGGTTCCTT+AGG - chr3_2:81607351-81607370 None:intergenic 55.0%
! ACCCATGACGGGGAACTTTC+AGG + chr3_2:81607356-81607375 Msa0430040:intron 55.0%
GCCTGAAAGTTCCCCGTCAT+GGG - chr3_2:81607360-81607379 None:intergenic 55.0%
AGCCACCAGAAGCTCGTAAC+GGG - chr3_2:81607385-81607404 None:intergenic 55.0%
GAGCCACCAGAAGCTCGTAA+CGG - chr3_2:81607386-81607405 None:intergenic 55.0%
TTTGGACTCCTCGGACAAGG+TGG + chr3_2:81607418-81607437 Msa0430040:intron 55.0%
GCCTGCTCGTAACCTCAGTT+GGG + chr3_2:81607899-81607918 Msa0430040:intron 55.0%
GATGGTAGCCAATCTGCAGC+AGG - chr3_2:81608568-81608587 None:intergenic 55.0%
AGTGCGACAAGATGGAGAGC+TGG + chr3_2:81608619-81608638 Msa0430040:CDS 55.0%
GGAGTAATTCGCAGCATCCG+CGG - chr3_2:81608951-81608970 None:intergenic 55.0%
CCCCACAAAACCGGCATGTG+AGG - chr3_2:81601111-81601130 None:intergenic 60.0%
GTGCCCATTGCAGTGGGGTT+TGG - chr3_2:81601407-81601426 None:intergenic 60.0%
AACCCCACTGCAATGGGCAC+TGG + chr3_2:81601407-81601426 Msa0430040:intron 60.0%
ACCCCACTGCAATGGGCACT+GGG + chr3_2:81601408-81601427 Msa0430040:intron 60.0%
TGCCCAGTGCCCATTGCAGT+GGG - chr3_2:81601413-81601432 None:intergenic 60.0%
TTGCCCAGTGCCCATTGCAG+TGG - chr3_2:81601414-81601433 None:intergenic 60.0%
CCCGATTCCCGCTATTGGGA+TGG - chr3_2:81602492-81602511 None:intergenic 60.0%
TCGGCCCGATTCCCGCTATT+GGG - chr3_2:81602496-81602515 None:intergenic 60.0%
TTCGGCCCGATTCCCGCTAT+TGG - chr3_2:81602497-81602516 None:intergenic 60.0%
CGGGAATCGGGCCGAACTTT+GGG + chr3_2:81602501-81602520 Msa0430040:intron 60.0%
TTGCTGCCGCCTCTGTTCCA+TGG + chr3_2:81603449-81603468 Msa0430040:intron 60.0%
GTGCGGCTCTCCCTAAAACG+TGG + chr3_2:81603492-81603511 Msa0430040:intron 60.0%
GGGCTGTGGCAGTCCTTCAA+AGG + chr3_2:81606016-81606035 Msa0430040:intron 60.0%
GGAGACGGAGGATGGAGGTA+AGG + chr3_2:81606174-81606193 Msa0430040:intron 60.0%
! CGAGTGCGATGCATGGGTTG+AGG - chr3_2:81606267-81606286 None:intergenic 60.0%
ACGAGGCAGAGTGACTGTCC+CGG - chr3_2:81606588-81606607 None:intergenic 60.0%
! GACCTTCATGGTTTGGGGCC+GGG + chr3_2:81607116-81607135 Msa0430040:intron 60.0%
ATCCCGGCCCCAAACCATGA+AGG - chr3_2:81607121-81607140 None:intergenic 60.0%
GGCCTGAAAGTTCCCCGTCA+TGG - chr3_2:81607361-81607380 None:intergenic 60.0%
! CACCAGAAGCTCGTAACGGG+GGG - chr3_2:81607382-81607401 None:intergenic 60.0%
CCACCAGAAGCTCGTAACGG+GGG - chr3_2:81607383-81607402 None:intergenic 60.0%
GCCACCAGAAGCTCGTAACG+GGG - chr3_2:81607384-81607403 None:intergenic 60.0%
CAAGGGATCCACCTTGTCCG+AGG - chr3_2:81607429-81607448 None:intergenic 60.0%
CGCCTGCTCGTAACCTCAGT+TGG + chr3_2:81607898-81607917 Msa0430040:intron 60.0%
GCCCAACTGAGGTTACGAGC+AGG - chr3_2:81607903-81607922 None:intergenic 60.0%
GCCCAGTGCCCATTGCAGTG+GGG - chr3_2:81601412-81601431 None:intergenic 65.0%
GCGGGAATCGGGCCGAACTT+TGG + chr3_2:81602500-81602519 Msa0430040:intron 65.0%
ACTTGGACCGAGGAGCCCTC+AGG - chr3_2:81604344-81604363 None:intergenic 65.0%
GAGGGCTCCTCGGTCCAAGT+TGG + chr3_2:81604344-81604363 Msa0430040:intron 65.0%
GAAGGACTGCCACAGCCCAC+AGG - chr3_2:81606014-81606033 None:intergenic 65.0%
CGAGGCAGAGTGACTGTCCC+GGG - chr3_2:81606587-81606606 None:intergenic 65.0%
CCCCCGTTACGAGCTTCTGG+TGG + chr3_2:81607380-81607399 Msa0430040:intron 65.0%
GGCCCCCCGTTACGAGCTTC+TGG + chr3_2:81607377-81607396 Msa0430040:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 81599707 81608984 81599707 ID=Msa0430040;Name=Msa0430040
chr3_2 mRNA 81599707 81608984 81599707 ID=Msa0430040-mRNA-1;Parent=Msa0430040;Name=Msa0430040-mRNA-1;_AED=0.04;_eAED=0.04;_QI=151|1|1|1|0|0.33|3|233|226
chr3_2 exon 81599707 81600246 81599707 ID=Msa0430040-mRNA-1:exon:22560;Parent=Msa0430040-mRNA-1
chr3_2 exon 81601664 81601778 81601664 ID=Msa0430040-mRNA-1:exon:22561;Parent=Msa0430040-mRNA-1
chr3_2 exon 81608575 81608984 81608575 ID=Msa0430040-mRNA-1:exon:22562;Parent=Msa0430040-mRNA-1
chr3_2 five_prime_UTR 81599707 81599857 81599707 ID=Msa0430040-mRNA-1:five_prime_utr;Parent=Msa0430040-mRNA-1
chr3_2 CDS 81599858 81600246 81599858 ID=Msa0430040-mRNA-1:cds;Parent=Msa0430040-mRNA-1
chr3_2 CDS 81601664 81601778 81601664 ID=Msa0430040-mRNA-1:cds;Parent=Msa0430040-mRNA-1
chr3_2 CDS 81608575 81608751 81608575 ID=Msa0430040-mRNA-1:cds;Parent=Msa0430040-mRNA-1
chr3_2 three_prime_UTR 81608752 81608984 81608752 ID=Msa0430040-mRNA-1:three_prime_utr;Parent=Msa0430040-mRNA-1
Gene Sequence

>Msa0430040

ATGGCTTCTTCAATATCCAACACAAAAATACTACTGCATGCTCATTCCTTCAAAAATCCTTTTTCTTTTCGTTCTTCTCGTTTGATTCTATCCATTCCTTTCTACTCCAAAAACAAACCACAGTTGCTTCATTCTCGTTTCTCTTCTTCCCTCAAAGTAGCTTCTTCTTCTTCTTCTGAAGCTCAAAACAATTTGCAAGGGAAACCGGTTCTTTCACAAGGTAAAGGAGGAATTGTGGAGGAACAGAGCAGCTATTCCTATCAACAAGAGGAAGTAGAAGAAGAAGATAGTACTGATGAACAAGATAAGTGGGTTGATTGGGAAGATCAGATTTTGGAAGATACCGTTCCTTTGGTTGGTTTTGTTAGAACAATCCTTCATTCTGGACAATATGAAAATGGAGATAGACTAAGCCCAGAGCACGAGAAAACCATTGTTGAGAAGCTCCTTCCATTTCACCCTGAATCTCAGAAAAAGATTGGATGTGGAATCGATTATATCACGATTGGCTACCATCCCAATTTTGATCGCTCTAGGTGTATGTTCATAGTGCGACAAGATGGAGAGCTGGTAGACTTTTCATATTGGAAATGCATAAAGGGCTTGATCAGAAAGAATTATCCATTATATGCAGACAGTTTCATTCTCAGGCACTTCAGGAAGCGGAGTCGTAATTTGTGA

Protein sequence

>Msa0430040

MASSISNTKILLHAHSFKNPFSFRSSRLILSIPFYSKNKPQLLHSRFSSSLKVASSSSSEAQNNLQGKPVLSQGKGGIVEEQSSYSYQQEEVEEEDSTDEQDKWVDWEDQILEDTVPLVGFVRTILHSGQYENGDRLSPEHEKTIVEKLLPFHPESQKKIGCGIDYITIGYHPNFDRSRCMFIVRQDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRKRSRNL*