Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182860 | XP_003626872.1 | 99.315 | 146 | 1 | 0 | 1 | 146 | 1 | 146 | 7.33e-106 | 308 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa1182860 | 0.801925 | 7.154176e-49 | -8.615850e-47 |
| Msa0008110 | Msa1182860 | 0.813942 | 1.982077e-51 | -8.615850e-47 |
| Msa0016670 | Msa1182860 | 0.820890 | 5.400716e-53 | -8.615850e-47 |
| Msa0017510 | Msa1182860 | 0.839927 | 1.182491e-57 | -8.615850e-47 |
| Msa0021500 | Msa1182860 | 0.804569 | 2.028613e-49 | -8.615850e-47 |
| Msa0025330 | Msa1182860 | 0.817143 | 3.842023e-52 | -8.615850e-47 |
| Msa0028640 | Msa1182860 | 0.832906 | 7.232879e-56 | -8.615850e-47 |
| Msa0032090 | Msa1182860 | 0.804589 | 2.008931e-49 | -8.615850e-47 |
| Msa0032430 | Msa1182860 | 0.803427 | 3.504923e-49 | -8.615850e-47 |
| Msa0032920 | Msa1182860 | -0.819145 | 1.354327e-52 | -8.615850e-47 |
| Msa0032960 | Msa1182860 | -0.808413 | 3.134926e-50 | -8.615850e-47 |
| Msa0034270 | Msa1182860 | 0.813006 | 3.184755e-51 | -8.615850e-47 |
| Msa0036870 | Msa1182860 | 0.803974 | 2.698751e-49 | -8.615850e-47 |
| Msa0057420 | Msa1182860 | 0.805944 | 1.045311e-49 | -8.615850e-47 |
| Msa0072900 | Msa1182860 | 0.818395 | 2.004123e-52 | -8.615850e-47 |
| Msa0074240 | Msa1182860 | 0.804354 | 2.249273e-49 | -8.615850e-47 |
| Msa0079380 | Msa1182860 | 0.802439 | 5.608648e-49 | -8.615850e-47 |
| Msa0081520 | Msa1182860 | 0.827411 | 1.587937e-54 | -8.615850e-47 |
| Msa0087470 | Msa1182860 | 0.802924 | 4.452659e-49 | -8.615850e-47 |
| Msa0089630 | Msa1182860 | 0.803999 | 2.666394e-49 | -8.615850e-47 |
| Msa0093400 | Msa1182860 | 0.821142 | 4.725679e-53 | -8.615850e-47 |
| Msa0094120 | Msa1182860 | 0.831662 | 1.470303e-55 | -8.615850e-47 |
| Msa0094140 | Msa1182860 | 0.819788 | 9.663604e-53 | -8.615850e-47 |
| Msa0094850 | Msa1182860 | 0.803762 | 2.986331e-49 | -8.615850e-47 |
| Msa0095900 | Msa1182860 | 0.800300 | 1.537808e-48 | -8.615850e-47 |
| Msa0110970 | Msa1182860 | 0.835892 | 1.287456e-56 | -8.615850e-47 |
| Msa0115160 | Msa1182860 | 0.802184 | 6.328464e-49 | -8.615850e-47 |
| Msa0118570 | Msa1182860 | 0.831432 | 1.675183e-55 | -8.615850e-47 |
| Msa0604540 | Msa1182860 | 0.817911 | 2.579276e-52 | -8.615850e-47 |
| Msa0616220 | Msa1182860 | 0.815280 | 1.002577e-51 | -8.615850e-47 |
| Msa0626450 | Msa1182860 | 0.853699 | 2.010806e-61 | -8.615850e-47 |
| Msa0626490 | Msa1182860 | 0.857978 | 1.129040e-62 | -8.615850e-47 |
| Msa0634300 | Msa1182860 | 0.809123 | 2.210173e-50 | -8.615850e-47 |
| Msa0639430 | Msa1182860 | 0.805874 | 1.081061e-49 | -8.615850e-47 |
| Msa0643300 | Msa1182860 | 0.810148 | 1.331249e-50 | -8.615850e-47 |
| Msa0650020 | Msa1182860 | 0.809547 | 1.792911e-50 | -8.615850e-47 |
| Msa0655560 | Msa1182860 | 0.828558 | 8.407720e-55 | -8.615850e-47 |
| Msa0661790 | Msa1182860 | 0.811173 | 7.994046e-51 | -8.615850e-47 |
| Msa0663300 | Msa1182860 | 0.807299 | 5.410226e-50 | -8.615850e-47 |
| Msa0664060 | Msa1182860 | 0.804586 | 2.012263e-49 | -8.615850e-47 |
| Msa0664600 | Msa1182860 | 0.852609 | 4.125028e-61 | -8.615850e-47 |
| Msa0669320 | Msa1182860 | 0.822665 | 2.098083e-53 | -8.615850e-47 |
| Msa0683570 | Msa1182860 | 0.838855 | 2.243871e-57 | -8.615850e-47 |
| Msa0689520 | Msa1182860 | 0.825439 | 4.684778e-54 | -8.615850e-47 |
| Msa0691980 | Msa1182860 | 0.822357 | 2.473939e-53 | -8.615850e-47 |
| Msa0698770 | Msa1182860 | 0.805466 | 1.316829e-49 | -8.615850e-47 |
| Msa0699550 | Msa1182860 | 0.800469 | 1.420511e-48 | -8.615850e-47 |
| Msa0710800 | Msa1182860 | 0.802837 | 4.640745e-49 | -8.615850e-47 |
| Msa0718550 | Msa1182860 | 0.839690 | 1.363039e-57 | -8.615850e-47 |
| Msa0727640 | Msa1182860 | 0.801650 | 8.146461e-49 | -8.615850e-47 |
| Msa0730430 | Msa1182860 | 0.822479 | 2.317964e-53 | -8.615850e-47 |
| Msa0736960 | Msa1182860 | 0.803236 | 3.838605e-49 | -8.615850e-47 |
| Msa0741240 | Msa1182860 | 0.808116 | 3.627447e-50 | -8.615850e-47 |
| Msa0741840 | Msa1182860 | 0.808695 | 2.730064e-50 | -8.615850e-47 |
| Msa0742740 | Msa1182860 | 0.802084 | 6.633515e-49 | -8.615850e-47 |
| Msa0754520 | Msa1182860 | 0.821897 | 3.162263e-53 | -8.615850e-47 |
| Msa0759650 | Msa1182860 | 0.806820 | 6.831758e-50 | -8.615850e-47 |
| Msa0768990 | Msa1182860 | 0.800273 | 1.557008e-48 | -8.615850e-47 |
| Msa0770720 | Msa1182860 | 0.846030 | 2.805297e-59 | -8.615850e-47 |
| Msa0778590 | Msa1182860 | 0.805088 | 1.580469e-49 | -8.615850e-47 |
| Msa0801210 | Msa1182860 | 0.825523 | 4.474078e-54 | -8.615850e-47 |
| Msa0823820 | Msa1182860 | 0.810892 | 9.195299e-51 | -8.615850e-47 |
| Msa0828560 | Msa1182860 | 0.802778 | 4.772842e-49 | -8.615850e-47 |
| Msa0829800 | Msa1182860 | 0.812299 | 4.545897e-51 | -8.615850e-47 |
| Msa0833220 | Msa1182860 | 0.819971 | 8.773962e-53 | -8.615850e-47 |
| Msa0839560 | Msa1182860 | 0.816525 | 5.287386e-52 | -8.615850e-47 |
| Msa0121090 | Msa1182860 | 0.811643 | 6.318203e-51 | -8.615850e-47 |
| Msa0136650 | Msa1182860 | 0.827859 | 1.239849e-54 | -8.615850e-47 |
| Msa0154320 | Msa1182860 | 0.806402 | 8.369221e-50 | -8.615850e-47 |
| Msa0157290 | Msa1182860 | 0.840257 | 9.694973e-58 | -8.615850e-47 |
| Msa0160130 | Msa1182860 | 0.807886 | 4.059995e-50 | -8.615850e-47 |
| Msa0168500 | Msa1182860 | 0.806268 | 8.934722e-50 | -8.615850e-47 |
| Msa0172070 | Msa1182860 | 0.801800 | 7.590201e-49 | -8.615850e-47 |
| Msa0173660 | Msa1182860 | 0.800586 | 1.344777e-48 | -8.615850e-47 |
| Msa0173890 | Msa1182860 | 0.807982 | 3.874337e-50 | -8.615850e-47 |
| Msa0174450 | Msa1182860 | 0.831424 | 1.683003e-55 | -8.615850e-47 |
| Msa0205840 | Msa1182860 | 0.820455 | 6.796988e-53 | -8.615850e-47 |
| Msa0211150 | Msa1182860 | 0.812219 | 4.733222e-51 | -8.615850e-47 |
| Msa0213280 | Msa1182860 | 0.808689 | 2.738132e-50 | -8.615850e-47 |
| Msa0223690 | Msa1182860 | 0.822041 | 2.928304e-53 | -8.615850e-47 |
| Msa0225320 | Msa1182860 | 0.832976 | 6.948754e-56 | -8.615850e-47 |
| Msa0225460 | Msa1182860 | 0.831818 | 1.345171e-55 | -8.615850e-47 |
| Msa0225680 | Msa1182860 | 0.838980 | 2.082332e-57 | -8.615850e-47 |
| Msa0225740 | Msa1182860 | 0.832024 | 1.196415e-55 | -8.615850e-47 |
| Msa0225760 | Msa1182860 | 0.815793 | 7.705739e-52 | -8.615850e-47 |
| Msa0232690 | Msa1182860 | 0.818730 | 1.682658e-52 | -8.615850e-47 |
| Msa0366240 | Msa1182860 | 0.809398 | 1.929734e-50 | -8.615850e-47 |
| Msa0378720 | Msa1182860 | 0.825171 | 5.422228e-54 | -8.615850e-47 |
| Msa0380620 | Msa1182860 | 0.819974 | 8.760613e-53 | -8.615850e-47 |
| Msa0386850 | Msa1182860 | 0.829975 | 3.809408e-55 | -8.615850e-47 |
| Msa0388960 | Msa1182860 | 0.805253 | 1.459806e-49 | -8.615850e-47 |
| Msa0390970 | Msa1182860 | 0.802457 | 5.559373e-49 | -8.615850e-47 |
| Msa0392510 | Msa1182860 | 0.825435 | 4.694329e-54 | -8.615850e-47 |
| Msa0410650 | Msa1182860 | 0.808165 | 3.540953e-50 | -8.615850e-47 |
| Msa0417270 | Msa1182860 | 0.815508 | 8.918945e-52 | -8.615850e-47 |
| Msa0417880 | Msa1182860 | 0.838248 | 3.218874e-57 | -8.615850e-47 |
| Msa0428150 | Msa1182860 | 0.801021 | 1.095719e-48 | -8.615850e-47 |
| Msa0430260 | Msa1182860 | 0.832038 | 1.187147e-55 | -8.615850e-47 |
| Msa0462500 | Msa1182860 | 0.806472 | 8.089581e-50 | -8.615850e-47 |
| Msa0464680 | Msa1182860 | 0.809757 | 1.615839e-50 | -8.615850e-47 |
| Msa0467490 | Msa1182860 | 0.821059 | 4.936276e-53 | -8.615850e-47 |
| Msa0469160 | Msa1182860 | 0.818243 | 2.170050e-52 | -8.615850e-47 |
| Msa0474730 | Msa1182860 | 0.820569 | 6.400541e-53 | -8.615850e-47 |
| Msa0475790 | Msa1182860 | 0.805374 | 1.376841e-49 | -8.615850e-47 |
| Msa0480220 | Msa1182860 | 0.808775 | 2.623597e-50 | -8.615850e-47 |
| Msa0981320 | Msa1182860 | 0.810923 | 9.054787e-51 | -8.615850e-47 |
| Msa1018690 | Msa1182860 | 0.801972 | 6.997707e-49 | -8.615850e-47 |
| Msa1019430 | Msa1182860 | 0.820857 | 5.496333e-53 | -8.615850e-47 |
| Msa1020480 | Msa1182860 | 0.815998 | 6.934845e-52 | -8.615850e-47 |
| Msa1020510 | Msa1182860 | 0.851988 | 6.197684e-61 | -8.615850e-47 |
| Msa1020670 | Msa1182860 | 0.812536 | 4.035140e-51 | -8.615850e-47 |
| Msa1024740 | Msa1182860 | 0.809187 | 2.141607e-50 | -8.615850e-47 |
| Msa1031930 | Msa1182860 | 0.813273 | 2.782718e-51 | -8.615850e-47 |
| Msa1045140 | Msa1182860 | 0.828738 | 7.609410e-55 | -8.615850e-47 |
| Msa1047870 | Msa1182860 | 0.808024 | 3.794174e-50 | -8.615850e-47 |
| Msa1051830 | Msa1182860 | 0.805709 | 1.171106e-49 | -8.615850e-47 |
| Msa1085200 | Msa1182860 | 0.806754 | 7.055124e-50 | -8.615850e-47 |
| Msa0240150 | Msa1182860 | 0.801138 | 1.036933e-48 | -8.615850e-47 |
| Msa0244860 | Msa1182860 | 0.801921 | 7.167975e-49 | -8.615850e-47 |
| Msa0248970 | Msa1182860 | 0.843849 | 1.087612e-58 | -8.615850e-47 |
| Msa0253700 | Msa1182860 | 0.809286 | 2.039400e-50 | -8.615850e-47 |
| Msa0260610 | Msa1182860 | 0.827001 | 1.991173e-54 | -8.615850e-47 |
| Msa0260670 | Msa1182860 | 0.830273 | 3.221749e-55 | -8.615850e-47 |
| Msa0261340 | Msa1182860 | 0.840585 | 7.960226e-58 | -8.615850e-47 |
| Msa0283450 | Msa1182860 | 0.813153 | 2.956117e-51 | -8.615850e-47 |
| Msa0283520 | Msa1182860 | 0.803881 | 2.821569e-49 | -8.615850e-47 |
| Msa0292400 | Msa1182860 | 0.866178 | 3.446449e-65 | -8.615850e-47 |
| Msa0297740 | Msa1182860 | 0.803188 | 3.926819e-49 | -8.615850e-47 |
| Msa0297790 | Msa1182860 | 0.809899 | 1.506414e-50 | -8.615850e-47 |
| Msa0300180 | Msa1182860 | 0.815616 | 8.436423e-52 | -8.615850e-47 |
| Msa0300690 | Msa1182860 | 0.815168 | 1.061261e-51 | -8.615850e-47 |
| Msa0311280 | Msa1182860 | 0.820329 | 7.265044e-53 | -8.615850e-47 |
| Msa0332000 | Msa1182860 | 0.811133 | 8.155389e-51 | -8.615850e-47 |
| Msa0334490 | Msa1182860 | 0.805710 | 1.170273e-49 | -8.615850e-47 |
| Msa0337540 | Msa1182860 | 0.820249 | 7.578260e-53 | -8.615850e-47 |
| Msa0340090 | Msa1182860 | 0.806358 | 8.552478e-50 | -8.615850e-47 |
| Msa0341910 | Msa1182860 | 0.813387 | 2.626495e-51 | -8.615850e-47 |
| Msa0363070 | Msa1182860 | 0.819675 | 1.025302e-52 | -8.615850e-47 |
| Msa0363200 | Msa1182860 | 0.806905 | 6.554048e-50 | -8.615850e-47 |
| Msa1113340 | Msa1182860 | 0.810387 | 1.182309e-50 | -8.615850e-47 |
| Msa1140210 | Msa1182860 | 0.813979 | 1.945328e-51 | -8.615850e-47 |
| Msa1151910 | Msa1182860 | 0.809981 | 1.445968e-50 | -8.615850e-47 |
| Msa1171710 | Msa1182860 | 0.802669 | 5.026494e-49 | -8.615850e-47 |
| Msa1182860 | Msa1183120 | 0.821980 | 3.025544e-53 | -8.615850e-47 |
| Msa1182860 | Msa1192090 | 0.809570 | 1.772502e-50 | -8.615850e-47 |
| Msa1182860 | Msa1196440 | 0.804851 | 1.771358e-49 | -8.615850e-47 |
| Msa1182860 | Msa1209460 | 0.838227 | 3.258965e-57 | -8.615850e-47 |
| Msa1182860 | Msa1223470 | 0.803065 | 4.164614e-49 | -8.615850e-47 |
| Msa1182860 | Msa1229500 | 0.832547 | 8.883071e-56 | -8.615850e-47 |
| Msa1182860 | Msa1232710 | 0.826130 | 3.211883e-54 | -8.615850e-47 |
| Msa1182860 | Msa1269480 | 0.842959 | 1.879923e-58 | -8.615850e-47 |
| Msa1182860 | Msa1271990 | 0.841554 | 4.428507e-58 | -8.615850e-47 |
| Msa1182860 | Msa1272900 | 0.853554 | 2.212775e-61 | -8.615850e-47 |
| Msa1182860 | Msa1298820 | 0.833165 | 6.238192e-56 | -8.615850e-47 |
| Msa1182860 | Msa1302830 | 0.816613 | 5.052314e-52 | -8.615850e-47 |
| Msa1182860 | Msa1309790 | 0.800882 | 1.169921e-48 | -8.615850e-47 |
| Msa1182860 | Msa1313150 | 0.807218 | 5.628574e-50 | -8.615850e-47 |
| Msa1182860 | Msa1313300 | 0.827886 | 1.221219e-54 | -8.615850e-47 |
| Msa1182860 | Msa1330410 | 0.821084 | 4.873327e-53 | -8.615850e-47 |
| Msa1182860 | Msa1355800 | 0.811644 | 6.313637e-51 | -8.615850e-47 |
| Msa1182860 | Msa1370010 | 0.815784 | 7.739907e-52 | -8.615850e-47 |
| Msa1182860 | Msa1409870 | 0.814158 | 1.776135e-51 | -8.615850e-47 |
| Msa1182860 | Msa1418090 | 0.824847 | 6.464185e-54 | -8.615850e-47 |
| Msa1182860 | Msa1422420 | 0.837337 | 5.515355e-57 | -8.615850e-47 |
| Msa1182860 | Msa1423880 | 0.811017 | 8.640836e-51 | -8.615850e-47 |
| Msa1182860 | Msa1431430 | 0.810803 | 9.611172e-51 | -8.615850e-47 |
| Msa1182860 | Msa1437940 | 0.821623 | 3.659470e-53 | -8.615850e-47 |
| Msa1182860 | Msa1440960 | 0.844307 | 8.196035e-59 | -8.615850e-47 |
| Msa1182860 | Msa1442820 | 0.809264 | 2.061665e-50 | -8.615850e-47 |
| Msa1182860 | Msa1443110 | 0.802979 | 4.338550e-49 | -8.615850e-47 |
| Msa1182860 | Msa1445190 | 0.803146 | 4.005800e-49 | -8.615850e-47 |
| Msa1182860 | Msa1452930 | 0.807109 | 5.934587e-50 | -8.615850e-47 |
| Msa1182860 | Msa1453740 | 0.805233 | 1.473693e-49 | -8.615850e-47 |
| Msa1182860 | Msa1464810 | 0.806692 | 7.270103e-50 | -8.615850e-47 |
| Msa1182860 | Msa1465440 | 0.801934 | 7.122543e-49 | -8.615850e-47 |
| Msa0498060 | Msa1182860 | 0.808556 | 2.922141e-50 | -8.615850e-47 |
| Msa0500380 | Msa1182860 | 0.813751 | 2.184263e-51 | -8.615850e-47 |
| Msa0507680 | Msa1182860 | 0.808920 | 2.443732e-50 | -8.615850e-47 |
| Msa0513160 | Msa1182860 | 0.804634 | 1.966239e-49 | -8.615850e-47 |
| Msa0532070 | Msa1182860 | 0.816165 | 6.363349e-52 | -8.615850e-47 |
| Msa0546680 | Msa1182860 | 0.806373 | 8.489926e-50 | -8.615850e-47 |
| Msa0569200 | Msa1182860 | 0.829305 | 5.544504e-55 | -8.615850e-47 |
| Msa0574890 | Msa1182860 | 0.806617 | 7.538933e-50 | -8.615850e-47 |
| Msa0594310 | Msa1182860 | 0.809997 | 1.434490e-50 | -8.615850e-47 |
| Msa0849390 | Msa1182860 | 0.801916 | 7.183631e-49 | -8.615850e-47 |
| Msa0861600 | Msa1182860 | 0.801217 | 9.994841e-49 | -8.615850e-47 |
| Msa0861870 | Msa1182860 | 0.815449 | 9.190946e-52 | -8.615850e-47 |
| Msa0863010 | Msa1182860 | 0.800375 | 1.484669e-48 | -8.615850e-47 |
| Msa0866270 | Msa1182860 | 0.803852 | 2.860736e-49 | -8.615850e-47 |
| Msa0866520 | Msa1182860 | 0.804054 | 2.597002e-49 | -8.615850e-47 |
| Msa0869780 | Msa1182860 | 0.810012 | 1.423858e-50 | -8.615850e-47 |
| Msa0875290 | Msa1182860 | 0.812027 | 5.211044e-51 | -8.615850e-47 |
| Msa0880140 | Msa1182860 | 0.837320 | 5.572509e-57 | -8.615850e-47 |
| Msa0906130 | Msa1182860 | 0.811057 | 8.466724e-51 | -8.615850e-47 |
| Msa0945110 | Msa1182860 | 0.823315 | 1.479931e-53 | -8.615850e-47 |
| Msa0966400 | Msa1182860 | 0.809753 | 1.619165e-50 | -8.615850e-47 |
| Msa0967870 | Msa1182860 | 0.804093 | 2.548938e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182860 | MtrunA17_Chr8g0338561 | 99.315 | 146 | 1 | 0 | 1 | 146 | 1 | 146 | 6.74e-110 | 308 |
| Msa1182860 | MtrunA17_Chr7g0234391 | 56.376 | 149 | 59 | 4 | 4 | 146 | 3 | 151 | 1.33e-56 | 173 |
| Msa1182860 | MtrunA17_Chr7g0275091 | 35.119 | 168 | 84 | 8 | 1 | 146 | 1 | 165 | 2.42e-19 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182860 | AT5G48500.1 | 51.316 | 152 | 52 | 7 | 1 | 133 | 1 | 149 | 6.39e-41 | 134 |
Find 46 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGATAATATAATATTTA+AGG | 0.102558 | 8_1:-18027207 | Msa1182860:three_prime_UTR |
| AGCTATGTTACCGGAAATTA+AGG | 0.264208 | 8_1:-18027024 | Msa1182860:three_prime_UTR |
| CTATAATATGATAATCTTCT+TGG | 0.285873 | 8_1:+18027183 | None:intergenic |
| TGATTGTTGTTCCACGTAGA+AGG | 0.326423 | 8_1:-18029528 | Msa1182860:CDS |
| GTTTGTAAAAGCTATGTTAC+CGG | 0.348816 | 8_1:-18027033 | Msa1182860:three_prime_UTR |
| CAGCATTTGGTAGCTGGGAT+TGG | 0.398463 | 8_1:-18029693 | Msa1182860:CDS |
| TTGTACAAGTCTTCATCAAC+AGG | 0.401129 | 8_1:+18027621 | None:intergenic |
| GATCAAGATCTTTATGTTGC+TGG | 0.401416 | 8_1:-18029586 | Msa1182860:CDS |
| TGATTATTGTGCTAAGCTCT+TGG | 0.402533 | 8_1:-18027155 | Msa1182860:three_prime_UTR |
| CTTTGAGGTGTATCATTGAT+TGG | 0.403387 | 8_1:-18027067 | Msa1182860:three_prime_UTR |
| ATGTACCAGCATTTGGTAGC+TGG | 0.414664 | 8_1:-18029699 | Msa1182860:CDS |
| TTAGTCTTTGATGTACTTTG+AGG | 0.416023 | 8_1:-18027082 | Msa1182860:three_prime_UTR |
| GTTGAGTGAGAGAATGTAGA+AGG | 0.420719 | 8_1:+18029907 | None:intergenic |
| GACATTGGACTAGGACTTGG+TGG | 0.430538 | 8_1:+18027660 | None:intergenic |
| AGGAACCATGTACCAGCATT+TGG | 0.438003 | 8_1:-18029706 | Msa1182860:CDS |
| GATTCAAAGCATTGAGTGAA+TGG | 0.443836 | 8_1:+18029658 | None:intergenic |
| TCATCAACAGGCTTTGGTGT+TGG | 0.446438 | 8_1:+18027633 | None:intergenic |
| CGTGGAACAACAATCATTGC+AGG | 0.459147 | 8_1:+18029535 | None:intergenic |
| AAGTCTTCATCAACAGGCTT+TGG | 0.463769 | 8_1:+18027627 | None:intergenic |
| GTGGTTGGAAGCAATATAAA+AGG | 0.472003 | 8_1:+18029973 | None:intergenic |
| GGTACGTTCCCAACATGAAA+AGG | 0.486529 | 8_1:-18027724 | Msa1182860:CDS |
| ATAGTAGATAGATACTCTCT+TGG | 0.491827 | 8_1:-18027240 | Msa1182860:three_prime_UTR |
| TTTGGTGTTGGTCTTGACAT+TGG | 0.498140 | 8_1:+18027645 | None:intergenic |
| TGTACCAGCATTTGGTAGCT+GGG | 0.509582 | 8_1:-18029698 | Msa1182860:CDS |
| CTTGACATTGGACTAGGACT+TGG | 0.515351 | 8_1:+18027657 | None:intergenic |
| TTCAAAGAAACAAAGCCTCT+TGG | 0.516769 | 8_1:-18029937 | Msa1182860:five_prime_UTR |
| AGCTACCAAATGCTGGTACA+TGG | 0.523568 | 8_1:+18029701 | None:intergenic |
| GATTGTTGTTCCACGTAGAA+GGG | 0.539249 | 8_1:-18029527 | Msa1182860:intron |
| TTAATGTGAGGTGGAAAGAA+AGG | 0.539311 | 8_1:+18030019 | None:intergenic |
| TTGGTGGTTCTTTCACAACA+TGG | 0.545398 | 8_1:+18027676 | None:intergenic |
| CAATCCCAGCTACCAAATGC+TGG | 0.549172 | 8_1:+18029694 | None:intergenic |
| ATCTTCTTTATGTCAAAACT+AGG | 0.563542 | 8_1:-18027587 | Msa1182860:CDS |
| CACTTGTTTCATCAAAACAA+TGG | 0.567991 | 8_1:-18029885 | Msa1182860:exon |
| GTTGGTCTTGACATTGGACT+AGG | 0.569668 | 8_1:+18027651 | None:intergenic |
| GTACATGGTTCCTCTTGAAG+TGG | 0.570983 | 8_1:+18029716 | None:intergenic |
| TCTTTATGTCAAAACTAGGA+AGG | 0.584419 | 8_1:-18027583 | Msa1182860:intron |
| GTTGGAAGCAATATAAAAGG+AGG | 0.598565 | 8_1:+18029976 | None:intergenic |
| TGCTTTGAATCTGCAAGACA+AGG | 0.600221 | 8_1:-18029646 | Msa1182860:CDS |
| AATAGGAATACCACTTCAAG+AGG | 0.609300 | 8_1:-18029726 | Msa1182860:intron |
| GTAGAAGGTTATTGACCAAG+AGG | 0.631756 | 8_1:+18029922 | None:intergenic |
| TAATGTGAGGTGGAAAGAAA+GGG | 0.631792 | 8_1:+18030020 | None:intergenic |
| GAGCGTGTGTTAATGTGAGG+TGG | 0.636602 | 8_1:+18030010 | None:intergenic |
| ATGAGTCAAGAAAATTTGAG+AGG | 0.637897 | 8_1:-18027304 | Msa1182860:three_prime_UTR |
| TTTGAATCTGCAAGACAAGG+TGG | 0.656042 | 8_1:-18029643 | Msa1182860:CDS |
| TGTGAGCGTGTGTTAATGTG+AGG | 0.723893 | 8_1:+18030007 | None:intergenic |
| AGGTGACATACCCTTCTACG+TGG | 0.761356 | 8_1:+18029517 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTATTTTTCATTAACAA+AGG | + | chr8_1:18028043-18028062 | None:intergenic | 10.0% |
| !! | AAAAATAATTAATTTCTCTA+TGG | - | chr8_1:18028052-18028071 | Msa1182860:intron | 10.0% |
| !!! | CAAAAAAAAAAATTCTTTTT+TGG | - | chr8_1:18029022-18029041 | Msa1182860:intron | 10.0% |
| !!! | AAATGAAAATTTAATTTTAG+TGG | + | chr8_1:18029577-18029596 | None:intergenic | 10.0% |
| !!! | ATCATTTTTATTTACAATAT+TGG | + | chr8_1:18029819-18029838 | None:intergenic | 10.0% |
| !! | AAATAAAAATGATTAAATGA+AGG | - | chr8_1:18029826-18029845 | Msa1182860:intron | 10.0% |
| !!! | TATGAAAACTAAATGTTTTA+TGG | - | chr8_1:18027321-18027340 | Msa1182860:exon | 15.0% |
| !!! | ATGAAAACTAAATGTTTTAT+GGG | - | chr8_1:18027322-18027341 | Msa1182860:exon | 15.0% |
| !! | TGGATTTAAATCATTAATTA+TGG | - | chr8_1:18027843-18027862 | Msa1182860:intron | 15.0% |
| !!! | ATTAATTATGGATTTTTGTT+TGG | - | chr8_1:18027855-18027874 | Msa1182860:intron | 15.0% |
| !!! | TTTACTACTTTTTTTTTTTG+AGG | - | chr8_1:18027887-18027906 | Msa1182860:intron | 15.0% |
| !!! | TTACTACTTTTTTTTTTTGA+GGG | - | chr8_1:18027888-18027907 | Msa1182860:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | chr8_1:18028472-18028491 | Msa1182860:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | chr8_1:18028473-18028492 | Msa1182860:intron | 15.0% |
| !! | AGTATTAATTAGAGTTATAA+AGG | - | chr8_1:18028587-18028606 | Msa1182860:intron | 15.0% |
| !! | GTATTAATTAGAGTTATAAA+GGG | - | chr8_1:18028588-18028607 | Msa1182860:intron | 15.0% |
| !!! | TTTTAATGAGAAATGTTAAT+CGG | - | chr8_1:18028733-18028752 | Msa1182860:intron | 15.0% |
| !! | TTAAGGATACTAAAAAAAAT+TGG | - | chr8_1:18028773-18028792 | Msa1182860:intron | 15.0% |
| !! | TAAGGATACTAAAAAAAATT+GGG | - | chr8_1:18028774-18028793 | Msa1182860:intron | 15.0% |
| !! | ACTTTATCACAATTAAAATT+GGG | + | chr8_1:18029085-18029104 | None:intergenic | 15.0% |
| !! | TACTTTATCACAATTAAAAT+TGG | + | chr8_1:18029086-18029105 | None:intergenic | 15.0% |
| !!! | AATTTTAATTGTGATAAAGT+AGG | - | chr8_1:18029085-18029104 | Msa1182860:intron | 15.0% |
| !! | AAAAAAAGTGATATTAGAAA+AGG | + | chr8_1:18029712-18029731 | None:intergenic | 15.0% |
| !! | TAAGTGTATATAACAAACAA+AGG | + | chr8_1:18027256-18027275 | None:intergenic | 20.0% |
| !!! | TGAAAACTAAATGTTTTATG+GGG | - | chr8_1:18027323-18027342 | Msa1182860:exon | 20.0% |
| !! | AATAAGAAACAAAACTAACA+AGG | + | chr8_1:18027618-18027637 | None:intergenic | 20.0% |
| !!! | TGTTTCTTATTTTCTAAAAG+AGG | - | chr8_1:18027627-18027646 | Msa1182860:CDS | 20.0% |
| !! | ATGCAAAACAATAAAATACT+AGG | + | chr8_1:18027809-18027828 | None:intergenic | 20.0% |
| !! | ATAATTAATTTCTCTATGGT+AGG | - | chr8_1:18028056-18028075 | Msa1182860:intron | 20.0% |
| !! | ATCATTAATGTCAATACAAT+AGG | + | chr8_1:18028106-18028125 | None:intergenic | 20.0% |
| !! | TATATAAATAAAAGGGAAAG+TGG | - | chr8_1:18028304-18028323 | Msa1182860:intron | 20.0% |
| !!! | TAAGAAAAGTGTATAAATGA+AGG | - | chr8_1:18028407-18028426 | Msa1182860:intron | 20.0% |
| !!! | AAGAAAAGTGTATAAATGAA+GGG | - | chr8_1:18028408-18028427 | Msa1182860:intron | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr8_1:18028432-18028451 | Msa1182860:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr8_1:18028542-18028561 | Msa1182860:intron | 20.0% |
| !!! | AGTAGTATTGAAAATTGAAA+TGG | - | chr8_1:18028645-18028664 | Msa1182860:intron | 20.0% |
| !! | TTATATTTGTTTCATTAACC+AGG | - | chr8_1:18028924-18028943 | Msa1182860:intron | 20.0% |
| !! | TATATTTGTTTCATTAACCA+GGG | - | chr8_1:18028925-18028944 | Msa1182860:intron | 20.0% |
| !! | TTAATAATGCATCTAACTTT+AGG | - | chr8_1:18029125-18029144 | Msa1182860:intron | 20.0% |
| !! | TTTATAAAAAGTGACATTTG+TGG | + | chr8_1:18029311-18029330 | None:intergenic | 20.0% |
| !! | AATTGAATATGCACTAATAT+AGG | + | chr8_1:18029633-18029652 | None:intergenic | 20.0% |
| !! | CTATAATATGATAATCTTCT+TGG | + | chr8_1:18029917-18029936 | None:intergenic | 20.0% |
| !!! | TTTCTTCTTTTTCTCTTAAA+CGG | - | chr8_1:18029971-18029990 | Msa1182860:five_prime_UTR | 20.0% |
| !! | GAAAACTAAATGTTTTATGG+GGG | - | chr8_1:18027324-18027343 | Msa1182860:exon | 25.0% |
| !! | AAAACTAAATGTTTTATGGG+GGG | - | chr8_1:18027325-18027344 | Msa1182860:exon | 25.0% |
| ! | TCACATATATTGTCAAAGTT+AGG | - | chr8_1:18027665-18027684 | Msa1182860:CDS | 25.0% |
| ! | CACATATATTGTCAAAGTTA+GGG | - | chr8_1:18027666-18027685 | Msa1182860:CDS | 25.0% |
| !!! | TTGTTTTGCATGTCTTTAAT+TGG | - | chr8_1:18027818-18027837 | Msa1182860:intron | 25.0% |
| ! | TAAATTGTATTGCATCAAAG+TGG | - | chr8_1:18027972-18027991 | Msa1182860:intron | 25.0% |
| ! | ATTAATGTCAATACAATAGG+AGG | + | chr8_1:18028103-18028122 | None:intergenic | 25.0% |
| !! | AGAAAAGTGTATAAATGAAG+GGG | - | chr8_1:18028409-18028428 | Msa1182860:intron | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr8_1:18028431-18028450 | Msa1182860:intron | 25.0% |
| ! | AGCTGTATTGAAAATTGAAA+TGG | - | chr8_1:18028505-18028524 | Msa1182860:intron | 25.0% |
| ! | GCTGTATTGAAAATTGAAAT+GGG | - | chr8_1:18028506-18028525 | Msa1182860:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr8_1:18028541-18028560 | Msa1182860:intron | 25.0% |
| !! | TGACTAACAATTTCTTCTTT+TGG | + | chr8_1:18028839-18028858 | None:intergenic | 25.0% |
| ! | ATATTTGTTTCATTAACCAG+GGG | - | chr8_1:18028926-18028945 | Msa1182860:intron | 25.0% |
| ! | TGCATTATTAAACAAAGTCA+TGG | + | chr8_1:18029116-18029135 | None:intergenic | 25.0% |
| !! | GCTTTATTGTCTATGTTAAT+GGG | - | chr8_1:18029147-18029166 | Msa1182860:intron | 25.0% |
| ! | TCACCAAAATTATAGACAAT+GGG | - | chr8_1:18029170-18029189 | Msa1182860:intron | 25.0% |
| !! | ATCTTGTTATGATATACACA+TGG | + | chr8_1:18029198-18029217 | None:intergenic | 25.0% |
| !!! | TAATTTGCTGTTAACATTGT+AGG | - | chr8_1:18029346-18029365 | Msa1182860:intron | 25.0% |
| ! | ATCTTCTTTATGTCAAAACT+AGG | - | chr8_1:18029510-18029529 | Msa1182860:intron | 25.0% |
| ! | TTATGAAAGCAAAGTAGTAA+AGG | + | chr8_1:18029601-18029620 | None:intergenic | 25.0% |
| !!! | CCTTTTTTTTCCTTAATTTC+CGG | + | chr8_1:18030086-18030105 | None:intergenic | 25.0% |
| CACTTGTTTCATCAAAACAA+TGG | - | chr8_1:18027212-18027231 | Msa1182860:three_prime_UTR | 30.0% | |
| !! | TTTTTATTTGGGGGTGTAAT+AGG | - | chr8_1:18027354-18027373 | Msa1182860:CDS | 30.0% |
| TAACAAGGATAAGAGAGTTA+AGG | + | chr8_1:18027603-18027622 | None:intergenic | 30.0% | |
| TTGCATGTCTTTAATTGGAT+TGG | - | chr8_1:18027823-18027842 | Msa1182860:intron | 30.0% | |
| TATTGCATCAAAGTGGTTAT+AGG | - | chr8_1:18027979-18027998 | Msa1182860:intron | 30.0% | |
| ! | TCTTTCTTTTTCTACTCTCA+CGG | + | chr8_1:18028013-18028032 | None:intergenic | 30.0% |
| ATAAATGTGAAATGAGTCGA+GGG | + | chr8_1:18028275-18028294 | None:intergenic | 30.0% | |
| AATAAATGTGAAATGAGTCG+AGG | + | chr8_1:18028276-18028295 | None:intergenic | 30.0% | |
| ! | TTGAAATGGGTCAGTTATTT+TGG | - | chr8_1:18028519-18028538 | Msa1182860:intron | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | - | chr8_1:18028520-18028539 | Msa1182860:intron | 30.0% |
| AGAGTTATAAAGGGAAAAAG+TGG | - | chr8_1:18028597-18028616 | Msa1182860:intron | 30.0% | |
| ! | TTGAAATGGCTCAGTTATTT+TGG | - | chr8_1:18028659-18028678 | Msa1182860:intron | 30.0% |
| !! | TGAAATGGCTCAGTTATTTT+GGG | - | chr8_1:18028660-18028679 | Msa1182860:intron | 30.0% |
| AGTAAATGACTCAGTTAATC+CGG | - | chr8_1:18028695-18028714 | Msa1182860:intron | 30.0% | |
| !! | GGCTTTATTGTCTATGTTAA+TGG | - | chr8_1:18029146-18029165 | Msa1182860:intron | 30.0% |
| GTCACCAAAATTATAGACAA+TGG | - | chr8_1:18029169-18029188 | Msa1182860:intron | 30.0% | |
| ! | GATCCCATTGTCTATAATTT+TGG | + | chr8_1:18029176-18029195 | None:intergenic | 30.0% |
| ! | TTTCACATCCTTTTCATGTT+GGG | + | chr8_1:18029384-18029403 | None:intergenic | 30.0% |
| ! | TTTTCACATCCTTTTCATGT+TGG | + | chr8_1:18029385-18029404 | None:intergenic | 30.0% |
| AGGATGTGAAAAAGCAAAAT+TGG | - | chr8_1:18029393-18029412 | Msa1182860:intron | 30.0% | |
| GGATGTGAAAAAGCAAAATT+GGG | - | chr8_1:18029394-18029413 | Msa1182860:intron | 30.0% | |
| !! | GTTTTGACATAAAGAAGATC+TGG | + | chr8_1:18029509-18029528 | None:intergenic | 30.0% |
| TCTTTATGTCAAAACTAGGA+AGG | - | chr8_1:18029514-18029533 | Msa1182860:intron | 30.0% | |
| ATGAGTCAAGAAAATTTGAG+AGG | - | chr8_1:18029793-18029812 | Msa1182860:intron | 30.0% | |
| ATAGTAGATAGATACTCTCT+TGG | - | chr8_1:18029857-18029876 | Msa1182860:intron | 30.0% | |
| ! | TTAGTCTTTGATGTACTTTG+AGG | - | chr8_1:18030015-18030034 | Msa1182860:five_prime_UTR | 30.0% |
| GTTTGTAAAAGCTATGTTAC+CGG | - | chr8_1:18030064-18030083 | Msa1182860:five_prime_UTR | 30.0% | |
| CCGGAAATTAAGGAAAAAAA+AGG | - | chr8_1:18030083-18030102 | Msa1182860:five_prime_UTR | 30.0% | |
| TAATGTGAGGTGGAAAGAAA+GGG | + | chr8_1:18027080-18027099 | None:intergenic | 35.0% | |
| TTAATGTGAGGTGGAAAGAA+AGG | + | chr8_1:18027081-18027100 | None:intergenic | 35.0% | |
| GTTGGAAGCAATATAAAAGG+AGG | + | chr8_1:18027124-18027143 | None:intergenic | 35.0% | |
| GTGGTTGGAAGCAATATAAA+AGG | + | chr8_1:18027127-18027146 | None:intergenic | 35.0% | |
| !!! | TTCTTTGAAGTGTGCTTTTC+AGG | + | chr8_1:18027149-18027168 | None:intergenic | 35.0% |
| TTCAAAGAAACAAAGCCTCT+TGG | - | chr8_1:18027160-18027179 | Msa1182860:three_prime_UTR | 35.0% | |
| AATAGGAATACCACTTCAAG+AGG | - | chr8_1:18027371-18027390 | Msa1182860:intron | 35.0% | |
| !! | GATTCAAAGCATTGAGTGAA+TGG | + | chr8_1:18027442-18027461 | None:intergenic | 35.0% |
| GATCAAGATCTTTATGTTGC+TGG | - | chr8_1:18027511-18027530 | Msa1182860:intron | 35.0% | |
| GGGAATCTATCATTCTATGT+TGG | - | chr8_1:18027686-18027705 | Msa1182860:CDS | 35.0% | |
| TACTACTGTCTATCCTCAAT+TGG | - | chr8_1:18027917-18027936 | Msa1182860:intron | 35.0% | |
| ! | TTTTCACACTCTTCCAATTG+AGG | + | chr8_1:18027933-18027952 | None:intergenic | 35.0% |
| CAAAGTAGGTCAATTATACC+GGG | + | chr8_1:18028372-18028391 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | + | chr8_1:18028373-18028392 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | chr8_1:18028386-18028405 | None:intergenic | 35.0% | |
| TGTATAAATGAAGGGGAAAG+TGG | - | chr8_1:18028416-18028435 | Msa1182860:intron | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr8_1:18028555-18028574 | Msa1182860:intron | 35.0% | |
| GTAAATGACTCAGTTAATCC+GGG | - | chr8_1:18028696-18028715 | Msa1182860:intron | 35.0% | |
| GAAATGTTAATCGGTATCCT+CGG | - | chr8_1:18028742-18028761 | Msa1182860:intron | 35.0% | |
| ! | TATCCTCGGAACATTGATTA+AGG | - | chr8_1:18028756-18028775 | Msa1182860:intron | 35.0% |
| TATCCTTAATCAATGTTCCG+AGG | + | chr8_1:18028762-18028781 | None:intergenic | 35.0% | |
| TAAAATTGGGTCATGCTAAC+CGG | + | chr8_1:18029072-18029091 | None:intergenic | 35.0% | |
| GCTGTTAACATTGTAGGAAA+AGG | - | chr8_1:18029352-18029371 | Msa1182860:intron | 35.0% | |
| TTGTACAAGTCTTCATCAAC+AGG | + | chr8_1:18029479-18029498 | None:intergenic | 35.0% | |
| AGTGGAGAAAAAGCAAAAGA+GGG | + | chr8_1:18029559-18029578 | None:intergenic | 35.0% | |
| TAGTGGAGAAAAAGCAAAAG+AGG | + | chr8_1:18029560-18029579 | None:intergenic | 35.0% | |
| TGATTATTGTGCTAAGCTCT+TGG | - | chr8_1:18029942-18029961 | Msa1182860:five_prime_UTR | 35.0% | |
| !! | CTTTGAGGTGTATCATTGAT+TGG | - | chr8_1:18030030-18030049 | Msa1182860:five_prime_UTR | 35.0% |
| AGCTATGTTACCGGAAATTA+AGG | - | chr8_1:18030073-18030092 | Msa1182860:five_prime_UTR | 35.0% | |
| !! | TTTGAAGTGTGCTTTTCAGG+TGG | + | chr8_1:18027146-18027165 | None:intergenic | 40.0% |
| GTAGAAGGTTATTGACCAAG+AGG | + | chr8_1:18027178-18027197 | None:intergenic | 40.0% | |
| GTTGAGTGAGAGAATGTAGA+AGG | + | chr8_1:18027193-18027212 | None:intergenic | 40.0% | |
| ! | TAAATGTTTTATGGGGGGTG+TGG | - | chr8_1:18027330-18027349 | Msa1182860:CDS | 40.0% |
| !!! | GGGGGTGTGGTTTTTTATTT+GGG | - | chr8_1:18027343-18027362 | Msa1182860:CDS | 40.0% |
| !!! | GGGGTGTGGTTTTTTATTTG+GGG | - | chr8_1:18027344-18027363 | Msa1182860:CDS | 40.0% |
| !!! | GGGTGTGGTTTTTTATTTGG+GGG | - | chr8_1:18027345-18027364 | Msa1182860:CDS | 40.0% |
| ! | TGCTTTGAATCTGCAAGACA+AGG | - | chr8_1:18027451-18027470 | Msa1182860:intron | 40.0% |
| TTTGAATCTGCAAGACAAGG+TGG | - | chr8_1:18027454-18027473 | Msa1182860:intron | 40.0% | |
| ! | TGATTGTTGTTCCACGTAGA+AGG | - | chr8_1:18027569-18027588 | Msa1182860:intron | 40.0% |
| ! | GATTGTTGTTCCACGTAGAA+GGG | - | chr8_1:18027570-18027589 | Msa1182860:intron | 40.0% |
| AGTCGAGGGCTCAATTAATT+CGG | + | chr8_1:18028261-18028280 | None:intergenic | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | - | chr8_1:18028370-18028389 | Msa1182860:intron | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr8_1:18028556-18028575 | Msa1182860:intron | 40.0% | |
| AAAATTTACTCCCTCCATCC+CGG | + | chr8_1:18028717-18028736 | None:intergenic | 40.0% | |
| ! | TTAACAAGTGTCTGAGACAC+CGG | - | chr8_1:18029050-18029069 | Msa1182860:intron | 40.0% |
| ! | TTGGTGGTTCTTTCACAACA+TGG | + | chr8_1:18029424-18029443 | None:intergenic | 40.0% |
| !! | TTTGGTGTTGGTCTTGACAT+TGG | + | chr8_1:18029455-18029474 | None:intergenic | 40.0% |
| AAGTCTTCATCAACAGGCTT+TGG | + | chr8_1:18029473-18029492 | None:intergenic | 40.0% | |
| ! | AAAAGCAAAAGAGGGTGTGT+GGG | + | chr8_1:18029551-18029570 | None:intergenic | 40.0% |
| ! | AAAAAGCAAAAGAGGGTGTG+TGG | + | chr8_1:18029552-18029571 | None:intergenic | 40.0% |
| ! | TTTTTGCCAATGCAGAAGAG+AGG | - | chr8_1:18029728-18029747 | Msa1182860:intron | 40.0% |
| ! | TTTTGCCAATGCAGAAGAGA+GGG | - | chr8_1:18029729-18029748 | Msa1182860:intron | 40.0% |
| TGTGAGCGTGTGTTAATGTG+AGG | + | chr8_1:18027093-18027112 | None:intergenic | 45.0% | |
| !!! | AAGTGTGCTTTTCAGGTGGT+TGG | + | chr8_1:18027142-18027161 | None:intergenic | 45.0% |
| !!! | GGGGGGTGTGGTTTTTTATT+TGG | - | chr8_1:18027342-18027361 | Msa1182860:CDS | 45.0% |
| GTACATGGTTCCTCTTGAAG+TGG | + | chr8_1:18027384-18027403 | None:intergenic | 45.0% | |
| AGGAACCATGTACCAGCATT+TGG | - | chr8_1:18027391-18027410 | Msa1182860:intron | 45.0% | |
| AGCTACCAAATGCTGGTACA+TGG | + | chr8_1:18027399-18027418 | None:intergenic | 45.0% | |
| ! | ATGTACCAGCATTTGGTAGC+TGG | - | chr8_1:18027398-18027417 | Msa1182860:intron | 45.0% |
| ! | TGTACCAGCATTTGGTAGCT+GGG | - | chr8_1:18027399-18027418 | Msa1182860:intron | 45.0% |
| CGTGGAACAACAATCATTGC+AGG | + | chr8_1:18027565-18027584 | None:intergenic | 45.0% | |
| CTCAATTAATTCGGGACGGA+GGG | + | chr8_1:18028252-18028271 | None:intergenic | 45.0% | |
| AGGGCTCAATTAATTCGGGA+CGG | + | chr8_1:18028256-18028275 | None:intergenic | 45.0% | |
| GTCGAGGGCTCAATTAATTC+GGG | + | chr8_1:18028260-18028279 | None:intergenic | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | + | chr8_1:18028368-18028387 | None:intergenic | 45.0% | |
| AATTAATACTCCCTCCGTCC+CGG | + | chr8_1:18028577-18028596 | None:intergenic | 45.0% | |
| ATGACTCAGTTAATCCGGGA+TGG | - | chr8_1:18028700-18028719 | Msa1182860:intron | 45.0% | |
| AAAATGTTAACCAGTGCCCC+TGG | + | chr8_1:18028945-18028964 | None:intergenic | 45.0% | |
| ! | GGTGTCTCAGACACTTGTTA+AGG | + | chr8_1:18029051-18029070 | None:intergenic | 45.0% |
| GGTACGTTCCCAACATGAAA+AGG | - | chr8_1:18029373-18029392 | Msa1182860:intron | 45.0% | |
| ! | CTTGACATTGGACTAGGACT+TGG | + | chr8_1:18029443-18029462 | None:intergenic | 45.0% |
| !! | GTTGGTCTTGACATTGGACT+AGG | + | chr8_1:18029449-18029468 | None:intergenic | 45.0% |
| ! | TCATCAACAGGCTTTGGTGT+TGG | + | chr8_1:18029467-18029486 | None:intergenic | 45.0% |
| ! | AAAGCAAAAGAGGGTGTGTG+GGG | + | chr8_1:18029550-18029569 | None:intergenic | 45.0% |
| !!! | ATTTTATTTTTTTTATTACA+TGG | - | chr8_1:18027766-18027785 | Msa1182860:intron | 5.0% |
| !!! | TTTTATTTTTTTTATTACAT+GGG | - | chr8_1:18027767-18027786 | Msa1182860:intron | 5.0% |
| !! | AAGAAAAATATATAAATAAA+AGG | - | chr8_1:18028296-18028315 | Msa1182860:intron | 5.0% |
| !! | AGAAAAATATATAAATAAAA+GGG | - | chr8_1:18028297-18028316 | Msa1182860:intron | 5.0% |
| !!! | TATAAAATTAATAAAACTTT+TGG | + | chr8_1:18029684-18029703 | None:intergenic | 5.0% |
| !!! | ATTTGATAATATAATATTTA+AGG | - | chr8_1:18029890-18029909 | Msa1182860:five_prime_UTR | 5.0% |
| GAGCGTGTGTTAATGTGAGG+TGG | + | chr8_1:18027090-18027109 | None:intergenic | 50.0% | |
| CAATCCCAGCTACCAAATGC+TGG | + | chr8_1:18027406-18027425 | None:intergenic | 50.0% | |
| ! | CAGCATTTGGTAGCTGGGAT+TGG | - | chr8_1:18027404-18027423 | Msa1182860:intron | 50.0% |
| AGGTGACATACCCTTCTACG+TGG | + | chr8_1:18027583-18027602 | None:intergenic | 50.0% | |
| GCTCAATTAATTCGGGACGG+AGG | + | chr8_1:18028253-18028272 | None:intergenic | 50.0% | |
| GTCAATTATACCGGGACGGA+GGG | + | chr8_1:18028364-18028383 | None:intergenic | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr8_1:18028560-18028579 | Msa1182860:intron | 50.0% | |
| ACTCAGTTAATCCGGGATGG+AGG | - | chr8_1:18028703-18028722 | Msa1182860:intron | 50.0% | |
| CTCAGTTAATCCGGGATGGA+GGG | - | chr8_1:18028704-18028723 | Msa1182860:intron | 50.0% | |
| GTCATGTTAACCAGTGCCCT+CGG | - | chr8_1:18028796-18028815 | Msa1182860:intron | 50.0% | |
| TCATGTTAACCAGTGCCCTC+GGG | - | chr8_1:18028797-18028816 | Msa1182860:intron | 50.0% | |
| TTCCTTAACCAGTGACCCGA+GGG | + | chr8_1:18028815-18028834 | None:intergenic | 50.0% | |
| ! | GTTTCATTAACCAGGGGCAC+TGG | - | chr8_1:18028932-18028951 | Msa1182860:intron | 50.0% |
| ! | GACATTGGACTAGGACTTGG+TGG | + | chr8_1:18029440-18029459 | None:intergenic | 50.0% |
| CACAACCCTCTCTTCTGCAT+TGG | + | chr8_1:18029737-18029756 | None:intergenic | 50.0% | |
| AAGTAGTACTCCCTCCGTCC+CGG | - | chr8_1:18028351-18028370 | Msa1182860:intron | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | + | chr8_1:18028365-18028384 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr8_1:18028564-18028583 | Msa1182860:intron | 55.0% | |
| CTTCCTTAACCAGTGACCCG+AGG | + | chr8_1:18028816-18028835 | None:intergenic | 55.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr8_1:18028563-18028582 | Msa1182860:intron | 60.0% | |
| ! | TGCCCTCGGGTCACTGGTTA+AGG | - | chr8_1:18028810-18028829 | Msa1182860:intron | 60.0% |
| AACCAGTGCCCTCGGGTCAC+TGG | - | chr8_1:18028804-18028823 | Msa1182860:intron | 65.0% | |
| ! | AACCAGTGACCCGAGGGCAC+TGG | + | chr8_1:18028809-18028828 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 18027002 | 18030117 | 18027002 | ID=Msa1182860;Name=Msa1182860 |
| chr8_1 | mRNA | 18027002 | 18030117 | 18027002 | ID=Msa1182860-mRNA-1;Parent=Msa1182860;Name=Msa1182860-mRNA-1;_AED=0.28;_eAED=0.28;_QI=229|1|1|1|0.66|0.75|4|327|146 |
| chr8_1 | exon | 18027002 | 18027376 | 18027002 | ID=Msa1182860-mRNA-1:exon:6917;Parent=Msa1182860-mRNA-1 |
| chr8_1 | exon | 18027584 | 18027751 | 18027584 | ID=Msa1182860-mRNA-1:exon:6916;Parent=Msa1182860-mRNA-1 |
| chr8_1 | exon | 18029528 | 18029743 | 18029528 | ID=Msa1182860-mRNA-1:exon:6915;Parent=Msa1182860-mRNA-1 |
| chr8_1 | exon | 18029880 | 18030117 | 18029880 | ID=Msa1182860-mRNA-1:exon:6914;Parent=Msa1182860-mRNA-1 |
| chr8_1 | five_prime_UTR | 18029889 | 18030117 | 18029889 | ID=Msa1182860-mRNA-1:five_prime_utr;Parent=Msa1182860-mRNA-1 |
| chr8_1 | CDS | 18029880 | 18029888 | 18029880 | ID=Msa1182860-mRNA-1:cds;Parent=Msa1182860-mRNA-1 |
| chr8_1 | CDS | 18029528 | 18029743 | 18029528 | ID=Msa1182860-mRNA-1:cds;Parent=Msa1182860-mRNA-1 |
| chr8_1 | CDS | 18027584 | 18027751 | 18027584 | ID=Msa1182860-mRNA-1:cds;Parent=Msa1182860-mRNA-1 |
| chr8_1 | CDS | 18027329 | 18027376 | 18027329 | ID=Msa1182860-mRNA-1:cds;Parent=Msa1182860-mRNA-1 |
| chr8_1 | three_prime_UTR | 18027002 | 18027328 | 18027002 | ID=Msa1182860-mRNA-1:three_prime_utr;Parent=Msa1182860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
