AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0639430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0639430 MtrunA17_Chr4g0028461 93.870 261 13 1 85 345 67 324 1.14e-154 437
Msa0639430 MtrunA17_Chr2g0327311 54.762 168 66 3 86 245 67 232 1.63e-46 161
Msa0639430 MtrunA17_Chr7g0264601 35.673 342 133 8 85 345 14 349 6.85e-42 149
Msa0639430 MtrunA17_Chr1g0180631 39.759 332 141 6 66 345 9 333 7.57e-40 143
Msa0639430 MtrunA17_Chr8g0386231 32.632 285 151 7 86 345 53 321 2.71e-28 112
Msa0639430 MtrunA17_Chr3g0094841 29.851 268 134 6 80 345 22 237 1.08e-27 108
Msa0639430 MtrunA17_Chr3g0132061 33.117 154 102 1 86 238 36 189 2.10e-21 92.8
Msa0639430 MtrunA17_Chr3g0132051 34.839 155 97 3 86 238 36 188 2.07e-20 89.4
Msa0639430 MtrunA17_Chr8g0337951 29.478 268 144 6 85 342 30 262 4.34e-20 88.6
Msa0639430 MtrunA17_Chr3g0128091 29.368 269 161 6 84 344 36 283 4.78e-20 88.6
Msa0639430 MtrunA17_Chr2g0290471 33.080 263 144 6 86 345 36 269 1.29e-19 87.4
Msa0639430 MtrunA17_Chr4g0001151 34.454 119 77 1 86 203 170 288 7.71e-16 77.4
Msa0639430 MtrunA17_Chr5g0429111 28.302 159 106 2 87 245 56 206 1.29e-15 76.6
Msa0639430 MtrunA17_Chr6g0454851 43.478 69 39 0 80 148 14 82 3.24e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0639430 AT5G60800.1 50.182 275 103 4 86 345 28 283 3.65e-55 182
Msa0639430 AT5G60800.2 49.818 275 104 4 86 345 28 283 3.44e-54 180
Msa0639430 AT5G03380.1 38.889 234 98 5 51 250 2 224 4.70e-37 137
Msa0639430 AT5G03380.2 40.609 197 83 3 88 250 1 197 2.88e-35 132
Msa0639430 AT3G02960.1 30.743 296 144 8 56 345 6 246 1.27e-32 122
Msa0639430 AT2G28090.1 43.889 180 91 4 72 245 12 187 6.80e-32 120
Msa0639430 AT2G36950.1 34.821 336 140 8 87 345 53 386 4.43e-30 118
Msa0639430 AT5G50740.5 33.969 262 164 5 86 345 29 283 6.59e-30 115
Msa0639430 AT5G50740.1 33.969 262 164 5 86 345 29 283 6.59e-30 115
Msa0639430 AT5G50740.3 33.571 280 141 7 86 345 36 290 4.66e-29 114
Msa0639430 AT5G24580.4 27.698 278 163 5 87 344 59 318 1.35e-21 94.0
Msa0639430 AT5G24580.1 27.698 278 163 5 87 344 59 318 1.35e-21 94.0
Msa0639430 AT5G24580.2 27.698 278 163 5 87 344 58 317 1.64e-21 94.0
Msa0639430 AT5G50740.2 40.984 122 71 1 86 206 29 150 3.52e-20 86.7
Msa0639430 AT5G63530.2 39.241 158 86 4 86 237 60 213 5.69e-20 89.7
Msa0639430 AT5G63530.1 39.241 158 86 4 86 237 75 228 5.78e-20 90.1
Msa0639430 AT5G50740.4 40.984 122 71 1 86 206 36 157 7.74e-20 85.9
Msa0639430 AT5G24580.3 27.338 278 161 6 87 344 59 315 2.15e-18 85.1
Msa0639430 AT1G29000.1 32.298 161 107 1 87 245 18 178 5.40e-17 80.5
Msa0639430 AT1G29000.2 32.298 161 107 1 87 245 18 178 5.40e-17 80.5
Msa0639430 AT5G24580.5 26.749 243 140 5 122 344 7 231 6.40e-14 70.9
Msa0639430 AT3G05220.1 54.237 59 27 0 82 140 8 66 9.45e-12 66.6

Find 82 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTTCTTGTTATCCTTCT+TGG 0.153199 4_3:+35300286 None:intergenic
CCACCTTCCTTGTCTTTCTT+TGG 0.170033 4_3:+35299678 None:intergenic
CTAAAACAAATTCTTAAAAT+TGG 0.209868 4_3:+35299131 None:intergenic
GTTAATTTCATTCAACTTGA+TGG 0.283510 4_3:-35299355 Msa0639430:three_prime_UTR
ATTCCATGAGACAGGGAAAA+AGG 0.302499 4_3:-35299284 Msa0639430:three_prime_UTR
GAGTAATGTGAATGATGATA+TGG 0.302818 4_3:-35299078 Msa0639430:three_prime_UTR
GTTCAACAACCCTTTGGTTT+TGG 0.304034 4_3:-35299531 Msa0639430:CDS
CCTTCAACACCTTTCAACTA+TGG 0.310187 4_3:-35300987 Msa0639430:exon
AGAAGAAGAAAAGTGTGATT+TGG 0.337019 4_3:+35301021 None:intergenic
TCCTTCTTGTTATCCTTCTT+GGG 0.342419 4_3:+35300287 None:intergenic
AGAAAAGTGTGATTTGGAAT+TGG 0.346947 4_3:+35301027 None:intergenic
TTAATACATTAGACATCATA+TGG 0.350817 4_3:-35299159 Msa0639430:three_prime_UTR
TTTGATGCTGTTAAGGTGTT+TGG 0.354986 4_3:+35300558 None:intergenic
AGTTAAGATAATGGAGTATA+TGG 0.364486 4_3:-35299553 Msa0639430:CDS
GTGTGATTTGGAATTGGAAT+TGG 0.365278 4_3:+35301033 None:intergenic
CAAGGATGTATTGATAAGAT+TGG 0.393223 4_3:-35299975 Msa0639430:CDS
AGGAGGAGAAGTTAAGATAA+TGG 0.394798 4_3:-35299562 Msa0639430:CDS
ATCACAGAAGCTTAAGAGAA+AGG 0.414583 4_3:-35299715 Msa0639430:CDS
AAGGAAGGTGGTGGTGGTGG+TGG 0.421210 4_3:-35299666 Msa0639430:CDS
GACAAGGAAGGTGGTGGTGG+TGG 0.426526 4_3:-35299669 Msa0639430:CDS
TTGTTATCCTTCTTGGGAAG+TGG 0.428023 4_3:+35300293 None:intergenic
TATGAATATTTAACATCTCT+TGG 0.428843 4_3:+35299463 None:intergenic
TGATACCTTTGATGCTGTTA+AGG 0.431626 4_3:+35300551 None:intergenic
AAGGATGTATTGATAAGATT+GGG 0.459716 4_3:-35299974 Msa0639430:CDS
TATATGGTTCAACAACCCTT+TGG 0.467046 4_3:-35299537 Msa0639430:CDS
CAACAACGGAGGAGATAAGA+AGG 0.477208 4_3:-35300659 Msa0639430:CDS
GGTGGTGGTGGTGAGAAGGA+TGG 0.477883 4_3:-35299654 Msa0639430:CDS
TTCTCATCACTAAACATTTG+TGG 0.482907 4_3:+35299426 None:intergenic
GGGGTCCACATTTCCGGTGA+CGG 0.497438 4_3:+35300373 None:intergenic
CTTTCTTCTCTCCTCCATTG+TGG 0.500142 4_3:+35300722 None:intergenic
TATGGAAATGTAAATGTTGA+AGG 0.501810 4_3:-35299507 Msa0639430:CDS
CATTTCACCACTTCCCAAGA+AGG 0.504323 4_3:-35300300 Msa0639430:CDS
GATGGTAATAACAATGAAGC+AGG 0.507061 4_3:-35299582 Msa0639430:CDS
AAAGACAAGGAAGGTGGTGG+TGG 0.508002 4_3:-35299672 Msa0639430:CDS
CCATAGTTGAAAGGTGTTGA+AGG 0.508773 4_3:+35300987 None:intergenic
TGATGAATGATGGATGATAA+TGG 0.515149 4_3:-35299332 Msa0639430:three_prime_UTR
CACATGACAATGCAAGCATT+AGG 0.517378 4_3:+35299402 None:intergenic
AAAATTGTTATGAAAACTAA+AGG 0.517522 4_3:-35299951 Msa0639430:intron
GAGGTAAGAAGAAGAACAAG+GGG 0.518923 4_3:-35299611 Msa0639430:CDS
TTTCCATAACCAAAACCAAA+GGG 0.521572 4_3:+35299522 None:intergenic
AACTTGATGGTGATGAATGA+TGG 0.524612 4_3:-35299342 Msa0639430:three_prime_UTR
GAAGCTTAAGAGAAAGGTTG+AGG 0.529560 4_3:-35299709 Msa0639430:CDS
AGAAGGATGGAAATGAAGGA+GGG 0.533243 4_3:-35299641 Msa0639430:CDS
GTGAAAGCAGAGTGTGAGAC+CGG 0.538967 4_3:-35300404 Msa0639430:CDS
ACCGGAAAAGTAACCGTCAC+CGG 0.547833 4_3:-35300386 Msa0639430:CDS
AAGGATAATGTGACTGTGAA+GGG 0.550110 4_3:-35299771 Msa0639430:CDS
GAAGGATAATGTGACTGTGA+AGG 0.553982 4_3:-35299772 Msa0639430:CDS
GGTGAGAAGGATGGAAATGA+AGG 0.559036 4_3:-35299645 Msa0639430:CDS
AAACACCTTAACAGCATCAA+AGG 0.560385 4_3:-35300556 Msa0639430:intron
GGTAAGAAGAAGAACAAGGG+GGG 0.560885 4_3:-35299609 Msa0639430:CDS
GAGAAGGATGGAAATGAAGG+AGG 0.564699 4_3:-35299642 Msa0639430:CDS
AGGTAAGAAGAAGAACAAGG+GGG 0.566617 4_3:-35299610 Msa0639430:CDS
TACCAATTTCAAAACAGAAG+TGG 0.568866 4_3:+35300007 None:intergenic
AGTAATGTGAATGATGATAT+GGG 0.569114 4_3:-35299077 Msa0639430:three_prime_UTR
AGTAACCGTCACCGGAAATG+TGG 0.571019 4_3:-35300378 Msa0639430:CDS
TCCCAAGAAGGATAACAAGA+AGG 0.578514 4_3:-35300288 Msa0639430:CDS
AAGGATGGAAATGAAGGAGG+GGG 0.580986 4_3:-35299639 Msa0639430:CDS
AGTTGAAAGGTGTTGAAGGA+AGG 0.587192 4_3:+35300991 None:intergenic
AATGAAAGTTGATAAAGAGA+AGG 0.588678 4_3:-35299790 Msa0639430:CDS
ATGGAAATGTAAATGTTGAA+GGG 0.589008 4_3:-35299506 Msa0639430:CDS
GAAGGATGGAAATGAAGGAG+GGG 0.593696 4_3:-35299640 Msa0639430:CDS
ATTTCCATAACCAAAACCAA+AGG 0.595132 4_3:+35299521 None:intergenic
AAAGTCTATATGCATTGCGA+AGG 0.597672 4_3:-35300598 Msa0639430:CDS
GGAGGTAAGAAGAAGAACAA+GGG 0.601818 4_3:-35299612 Msa0639430:CDS
CAACAACAATGAAGGGACCA+AGG 0.604032 4_3:-35300764 Msa0639430:CDS
GGGAGGTAAGAAGAAGAACA+AGG 0.606219 4_3:-35299613 Msa0639430:CDS
TTATTACCGCCATAGTTGAA+AGG 0.610004 4_3:+35300978 None:intergenic
GATAATGGTGATGATGATGA+TGG 0.610461 4_3:-35299317 Msa0639430:three_prime_UTR
AACAACAACAACCACAATGG+AGG 0.618101 4_3:-35300733 Msa0639430:CDS
AAGAAGGAAGAGAACAACAA+AGG 0.625603 4_3:-35300643 Msa0639430:CDS
AAATTGGTACTACACTGTCA+AGG 0.625937 4_3:-35299993 Msa0639430:CDS
TCATCACTAAACATTTGTGG+TGG 0.630320 4_3:+35299429 None:intergenic
TTTGTTGATTCCATGAGACA+GGG 0.631407 4_3:-35299291 Msa0639430:three_prime_UTR
TCAACACCTTTCAACTATGG+CGG 0.634639 4_3:-35300984 Msa0639430:intron
AAGAAAGACAAGGAAGGTGG+TGG 0.634788 4_3:-35299675 Msa0639430:CDS
GGTAATAACAATGAAGCAGG+AGG 0.639502 4_3:-35299579 Msa0639430:CDS
TGTGACTGTGAAGGGTACAA+TGG 0.642558 4_3:-35299763 Msa0639430:CDS
CCAAAGAAAGACAAGGAAGG+TGG 0.648516 4_3:-35299678 Msa0639430:CDS
CAACCAAAGAAAGACAAGGA+AGG 0.655515 4_3:-35299681 Msa0639430:CDS
AGTTCAACCAAAGAAAGACA+AGG 0.673352 4_3:-35299685 Msa0639430:CDS
GGAGGAGAGAAGAACAACAA+CGG 0.702115 4_3:-35300673 Msa0639430:CDS
GGAGAGAAGAACAACAACGG+AGG 0.706458 4_3:-35300670 Msa0639430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGATTTTGTTTTAATTTTT+TGG - chr4_3:35300068-35300087 Msa0639430:intron 10.0%
!!! ATTTATTTTTTTCTATGATT+TGG - chr4_3:35300245-35300264 Msa0639430:CDS 10.0%
!!! ATGATTTTGTTTTAATTTTT+TGG - chr4_3:35300068-35300087 Msa0639430:intron 10.0%
!!! ATTTATTTTTTTCTATGATT+TGG - chr4_3:35300245-35300264 Msa0639430:CDS 10.0%
!! CAAAAACAAAAACAAAAAAT+GGG + chr4_3:35299251-35299270 None:intergenic 15.0%
!! ACAAAAACAAAAACAAAAAA+TGG + chr4_3:35299252-35299271 None:intergenic 15.0%
!! AAAATTGTTATGAAAACTAA+AGG - chr4_3:35300185-35300204 Msa0639430:intron 15.0%
!! AAAACATTAAAAAAGAAAAG+TGG + chr4_3:35300923-35300942 None:intergenic 15.0%
!!! TTTCTTTTTTAATGTTTTAG+AGG - chr4_3:35300925-35300944 Msa0639430:intron 15.0%
!! CTAAAACAAATTCTTAAAAT+TGG + chr4_3:35301008-35301027 None:intergenic 15.0%
!! CAAAAACAAAAACAAAAAAT+GGG + chr4_3:35299251-35299270 None:intergenic 15.0%
!! ACAAAAACAAAAACAAAAAA+TGG + chr4_3:35299252-35299271 None:intergenic 15.0%
!! AAAATTGTTATGAAAACTAA+AGG - chr4_3:35300185-35300204 Msa0639430:intron 15.0%
!! AAAACATTAAAAAAGAAAAG+TGG + chr4_3:35300923-35300942 None:intergenic 15.0%
!!! TTTCTTTTTTAATGTTTTAG+AGG - chr4_3:35300925-35300944 Msa0639430:intron 15.0%
!! CTAAAACAAATTCTTAAAAT+TGG + chr4_3:35301008-35301027 None:intergenic 15.0%
!! TTACAGAAGAAGAAAAATAA+AGG - chr4_3:35299274-35299293 Msa0639430:three_prime_UTR 20.0%
!! TATGAATATTTAACATCTCT+TGG + chr4_3:35300676-35300695 None:intergenic 20.0%
!! TTAATACATTAGACATCATA+TGG - chr4_3:35300977-35300996 Msa0639430:intron 20.0%
!! TTACAGAAGAAGAAAAATAA+AGG - chr4_3:35299274-35299293 Msa0639430:three_prime_UTR 20.0%
!! TATGAATATTTAACATCTCT+TGG + chr4_3:35300676-35300695 None:intergenic 20.0%
!! TTAATACATTAGACATCATA+TGG - chr4_3:35300977-35300996 Msa0639430:intron 20.0%
! AAGAAAAATAAAGGAGGAAA+TGG - chr4_3:35299283-35299302 Msa0639430:three_prime_UTR 25.0%
! AACAACAAAAACAACAACAA+TGG - chr4_3:35299442-35299461 Msa0639430:CDS 25.0%
!!! TTCTCATCAGATTTTTTGTT+TGG + chr4_3:35299882-35299901 None:intergenic 25.0%
! GAAAAATGAAGACAAAAAAG+AGG - chr4_3:35299902-35299921 Msa0639430:intron 25.0%
!! AAGGATGTATTGATAAGATT+GGG - chr4_3:35300162-35300181 Msa0639430:intron 25.0%
!!! AATGAAAGTTGATAAAGAGA+AGG - chr4_3:35300346-35300365 Msa0639430:CDS 25.0%
!!! AGTTAAGATAATGGAGTATA+TGG - chr4_3:35300583-35300602 Msa0639430:CDS 25.0%
! TATGGAAATGTAAATGTTGA+AGG - chr4_3:35300629-35300648 Msa0639430:CDS 25.0%
! ATGGAAATGTAAATGTTGAA+GGG - chr4_3:35300630-35300649 Msa0639430:CDS 25.0%
! GTTAATTTCATTCAACTTGA+TGG - chr4_3:35300781-35300800 Msa0639430:CDS 25.0%
!!! TAATGTTTTAGAGGTATGTA+AGG - chr4_3:35300934-35300953 Msa0639430:intron 25.0%
! AGTAATGTGAATGATGATAT+GGG - chr4_3:35301059-35301078 Msa0639430:five_prime_UTR 25.0%
! AAGAAAAATAAAGGAGGAAA+TGG - chr4_3:35299283-35299302 Msa0639430:three_prime_UTR 25.0%
! AACAACAAAAACAACAACAA+TGG - chr4_3:35299442-35299461 Msa0639430:CDS 25.0%
!!! TTCTCATCAGATTTTTTGTT+TGG + chr4_3:35299882-35299901 None:intergenic 25.0%
! GAAAAATGAAGACAAAAAAG+AGG - chr4_3:35299902-35299921 Msa0639430:intron 25.0%
!! AAGGATGTATTGATAAGATT+GGG - chr4_3:35300162-35300181 Msa0639430:intron 25.0%
!!! AATGAAAGTTGATAAAGAGA+AGG - chr4_3:35300346-35300365 Msa0639430:CDS 25.0%
!!! AGTTAAGATAATGGAGTATA+TGG - chr4_3:35300583-35300602 Msa0639430:CDS 25.0%
! TATGGAAATGTAAATGTTGA+AGG - chr4_3:35300629-35300648 Msa0639430:CDS 25.0%
! ATGGAAATGTAAATGTTGAA+GGG - chr4_3:35300630-35300649 Msa0639430:CDS 25.0%
! GTTAATTTCATTCAACTTGA+TGG - chr4_3:35300781-35300800 Msa0639430:CDS 25.0%
!!! TAATGTTTTAGAGGTATGTA+AGG - chr4_3:35300934-35300953 Msa0639430:intron 25.0%
! AGTAATGTGAATGATGATAT+GGG - chr4_3:35301059-35301078 Msa0639430:five_prime_UTR 25.0%
! AGAAAAGTGTGATTTGGAAT+TGG + chr4_3:35299112-35299131 None:intergenic 30.0%
! AGAAGAAGAAAAGTGTGATT+TGG + chr4_3:35299118-35299137 None:intergenic 30.0%
CAGAAGAAGAAAAATAAAGG+AGG - chr4_3:35299277-35299296 Msa0639430:three_prime_UTR 30.0%
AAAAATAAAGGAGGAAATGG+TGG - chr4_3:35299286-35299305 Msa0639430:three_prime_UTR 30.0%
AACAACAACAACAACAACAA+TGG - chr4_3:35299322-35299341 Msa0639430:three_prime_UTR 30.0%
AACAACAACAACAACAATGA+AGG - chr4_3:35299364-35299383 Msa0639430:three_prime_UTR 30.0%
ACAACAACAACAACAATGAA+GGG - chr4_3:35299365-35299384 Msa0639430:three_prime_UTR 30.0%
AACAAAAACAACAACAATGG+AGG - chr4_3:35299445-35299464 Msa0639430:CDS 30.0%
!!! TCTATACATTTTTTCCGATC+TGG - chr4_3:35299629-35299648 Msa0639430:CDS 30.0%
!!! CTATACATTTTTTCCGATCT+GGG - chr4_3:35299630-35299649 Msa0639430:CDS 30.0%
!!! CAACCATGTTTCTGTTTTTA+AGG - chr4_3:35299699-35299718 Msa0639430:CDS 30.0%
ACACCTTAAAAACAGAAACA+TGG + chr4_3:35299705-35299724 None:intergenic 30.0%
!!! CTGTTTTTAAGGTGTTGATA+CGG - chr4_3:35299710-35299729 Msa0639430:CDS 30.0%
!!! TACCACTTCTGTTTTGAAAT+TGG - chr4_3:35300127-35300146 Msa0639430:intron 30.0%
TACCAATTTCAAAACAGAAG+TGG + chr4_3:35300132-35300151 None:intergenic 30.0%
! CAAGGATGTATTGATAAGAT+TGG - chr4_3:35300161-35300180 Msa0639430:intron 30.0%
!! CATATGATTTTGATGTGTGT+AGG - chr4_3:35300314-35300333 Msa0639430:CDS 30.0%
TTTCCATAACCAAAACCAAA+GGG + chr4_3:35300617-35300636 None:intergenic 30.0%
ATTTCCATAACCAAAACCAA+AGG + chr4_3:35300618-35300637 None:intergenic 30.0%
TTCTCATCACTAAACATTTG+TGG + chr4_3:35300713-35300732 None:intergenic 30.0%
!! TGATGAATGATGGATGATAA+TGG - chr4_3:35300804-35300823 Msa0639430:CDS 30.0%
!! TTTTAGAGGTATGTAAGGAA+GGG - chr4_3:35300939-35300958 Msa0639430:intron 30.0%
GAGTAATGTGAATGATGATA+TGG - chr4_3:35301058-35301077 Msa0639430:five_prime_UTR 30.0%
! AGAAAAGTGTGATTTGGAAT+TGG + chr4_3:35299112-35299131 None:intergenic 30.0%
! AGAAGAAGAAAAGTGTGATT+TGG + chr4_3:35299118-35299137 None:intergenic 30.0%
CAGAAGAAGAAAAATAAAGG+AGG - chr4_3:35299277-35299296 Msa0639430:three_prime_UTR 30.0%
AAAAATAAAGGAGGAAATGG+TGG - chr4_3:35299286-35299305 Msa0639430:three_prime_UTR 30.0%
AACAACAACAACAACAACAA+TGG - chr4_3:35299322-35299341 Msa0639430:three_prime_UTR 30.0%
AACAACAACAACAACAATGA+AGG - chr4_3:35299364-35299383 Msa0639430:three_prime_UTR 30.0%
ACAACAACAACAACAATGAA+GGG - chr4_3:35299365-35299384 Msa0639430:three_prime_UTR 30.0%
AACAAAAACAACAACAATGG+AGG - chr4_3:35299445-35299464 Msa0639430:CDS 30.0%
!!! TCTATACATTTTTTCCGATC+TGG - chr4_3:35299629-35299648 Msa0639430:CDS 30.0%
!!! CTATACATTTTTTCCGATCT+GGG - chr4_3:35299630-35299649 Msa0639430:CDS 30.0%
!!! CAACCATGTTTCTGTTTTTA+AGG - chr4_3:35299699-35299718 Msa0639430:CDS 30.0%
ACACCTTAAAAACAGAAACA+TGG + chr4_3:35299705-35299724 None:intergenic 30.0%
!!! CTGTTTTTAAGGTGTTGATA+CGG - chr4_3:35299710-35299729 Msa0639430:CDS 30.0%
!!! TACCACTTCTGTTTTGAAAT+TGG - chr4_3:35300127-35300146 Msa0639430:intron 30.0%
TACCAATTTCAAAACAGAAG+TGG + chr4_3:35300132-35300151 None:intergenic 30.0%
! CAAGGATGTATTGATAAGAT+TGG - chr4_3:35300161-35300180 Msa0639430:intron 30.0%
!! CATATGATTTTGATGTGTGT+AGG - chr4_3:35300314-35300333 Msa0639430:CDS 30.0%
TTTCCATAACCAAAACCAAA+GGG + chr4_3:35300617-35300636 None:intergenic 30.0%
ATTTCCATAACCAAAACCAA+AGG + chr4_3:35300618-35300637 None:intergenic 30.0%
TTCTCATCACTAAACATTTG+TGG + chr4_3:35300713-35300732 None:intergenic 30.0%
!! TGATGAATGATGGATGATAA+TGG - chr4_3:35300804-35300823 Msa0639430:CDS 30.0%
!! TTTTAGAGGTATGTAAGGAA+GGG - chr4_3:35300939-35300958 Msa0639430:intron 30.0%
GAGTAATGTGAATGATGATA+TGG - chr4_3:35301058-35301077 Msa0639430:five_prime_UTR 30.0%
! GTGTGATTTGGAATTGGAAT+TGG + chr4_3:35299106-35299125 None:intergenic 35.0%
TTATTACCGCCATAGTTGAA+AGG + chr4_3:35299161-35299180 None:intergenic 35.0%
!!! GTTGTTGTTGTTTTCTTCCT+TGG + chr4_3:35299392-35299411 None:intergenic 35.0%
AACAACAACAACAACCACAA+TGG - chr4_3:35299400-35299419 Msa0639430:exon 35.0%
AAGAAGGAAGAGAACAACAA+AGG - chr4_3:35299493-35299512 Msa0639430:CDS 35.0%
AAAGTCTATATGCATTGCGA+AGG - chr4_3:35299538-35299557 Msa0639430:CDS 35.0%
! TTTGATGCTGTTAAGGTGTT+TGG + chr4_3:35299581-35299600 None:intergenic 35.0%
AAACACCTTAACAGCATCAA+AGG - chr4_3:35299580-35299599 Msa0639430:CDS 35.0%
TGATACCTTTGATGCTGTTA+AGG + chr4_3:35299588-35299607 None:intergenic 35.0%
ACAATGATGAAAACCCAGAT+CGG + chr4_3:35299646-35299665 None:intergenic 35.0%
!! AGATTGTCTCTCAGTTTTGT+GGG + chr4_3:35299786-35299805 None:intergenic 35.0%
! AAGATTGTCTCTCAGTTTTG+TGG + chr4_3:35299787-35299806 None:intergenic 35.0%
! TCCTTCTTGTTATCCTTCTT+GGG + chr4_3:35299852-35299871 None:intergenic 35.0%
! TTCCTTCTTGTTATCCTTCT+TGG + chr4_3:35299853-35299872 None:intergenic 35.0%
AAATTGGTACTACACTGTCA+AGG - chr4_3:35300143-35300162 Msa0639430:intron 35.0%
AAGGATAATGTGACTGTGAA+GGG - chr4_3:35300365-35300384 Msa0639430:CDS 35.0%
ATCACAGAAGCTTAAGAGAA+AGG - chr4_3:35300421-35300440 Msa0639430:intron 35.0%
AGTTCAACCAAAGAAAGACA+AGG - chr4_3:35300451-35300470 Msa0639430:intron 35.0%
GATGGTAATAACAATGAAGC+AGG - chr4_3:35300554-35300573 Msa0639430:intron 35.0%
AGGAGGAGAAGTTAAGATAA+TGG - chr4_3:35300574-35300593 Msa0639430:CDS 35.0%
TATATGGTTCAACAACCCTT+TGG - chr4_3:35300599-35300618 Msa0639430:CDS 35.0%
TCATCACTAAACATTTGTGG+TGG + chr4_3:35300710-35300729 None:intergenic 35.0%
!! AACTTGATGGTGATGAATGA+TGG - chr4_3:35300794-35300813 Msa0639430:CDS 35.0%
! GATAATGGTGATGATGATGA+TGG - chr4_3:35300819-35300838 Msa0639430:CDS 35.0%
!!! TTTTGTTGATTCCATGAGAC+AGG - chr4_3:35300844-35300863 Msa0639430:CDS 35.0%
!! TTTGTTGATTCCATGAGACA+GGG - chr4_3:35300845-35300864 Msa0639430:CDS 35.0%
!!! GTTTTAGAGGTATGTAAGGA+AGG - chr4_3:35300938-35300957 Msa0639430:intron 35.0%
! GTGTGATTTGGAATTGGAAT+TGG + chr4_3:35299106-35299125 None:intergenic 35.0%
TTATTACCGCCATAGTTGAA+AGG + chr4_3:35299161-35299180 None:intergenic 35.0%
!!! GTTGTTGTTGTTTTCTTCCT+TGG + chr4_3:35299392-35299411 None:intergenic 35.0%
AACAACAACAACAACCACAA+TGG - chr4_3:35299400-35299419 Msa0639430:exon 35.0%
AAGAAGGAAGAGAACAACAA+AGG - chr4_3:35299493-35299512 Msa0639430:CDS 35.0%
AAAGTCTATATGCATTGCGA+AGG - chr4_3:35299538-35299557 Msa0639430:CDS 35.0%
! TTTGATGCTGTTAAGGTGTT+TGG + chr4_3:35299581-35299600 None:intergenic 35.0%
AAACACCTTAACAGCATCAA+AGG - chr4_3:35299580-35299599 Msa0639430:CDS 35.0%
TGATACCTTTGATGCTGTTA+AGG + chr4_3:35299588-35299607 None:intergenic 35.0%
ACAATGATGAAAACCCAGAT+CGG + chr4_3:35299646-35299665 None:intergenic 35.0%
!! AGATTGTCTCTCAGTTTTGT+GGG + chr4_3:35299786-35299805 None:intergenic 35.0%
! AAGATTGTCTCTCAGTTTTG+TGG + chr4_3:35299787-35299806 None:intergenic 35.0%
! TCCTTCTTGTTATCCTTCTT+GGG + chr4_3:35299852-35299871 None:intergenic 35.0%
! TTCCTTCTTGTTATCCTTCT+TGG + chr4_3:35299853-35299872 None:intergenic 35.0%
AAATTGGTACTACACTGTCA+AGG - chr4_3:35300143-35300162 Msa0639430:intron 35.0%
AAGGATAATGTGACTGTGAA+GGG - chr4_3:35300365-35300384 Msa0639430:CDS 35.0%
ATCACAGAAGCTTAAGAGAA+AGG - chr4_3:35300421-35300440 Msa0639430:intron 35.0%
AGTTCAACCAAAGAAAGACA+AGG - chr4_3:35300451-35300470 Msa0639430:intron 35.0%
GATGGTAATAACAATGAAGC+AGG - chr4_3:35300554-35300573 Msa0639430:intron 35.0%
AGGAGGAGAAGTTAAGATAA+TGG - chr4_3:35300574-35300593 Msa0639430:CDS 35.0%
TATATGGTTCAACAACCCTT+TGG - chr4_3:35300599-35300618 Msa0639430:CDS 35.0%
TCATCACTAAACATTTGTGG+TGG + chr4_3:35300710-35300729 None:intergenic 35.0%
!! AACTTGATGGTGATGAATGA+TGG - chr4_3:35300794-35300813 Msa0639430:CDS 35.0%
! GATAATGGTGATGATGATGA+TGG - chr4_3:35300819-35300838 Msa0639430:CDS 35.0%
!!! TTTTGTTGATTCCATGAGAC+AGG - chr4_3:35300844-35300863 Msa0639430:CDS 35.0%
!! TTTGTTGATTCCATGAGACA+GGG - chr4_3:35300845-35300864 Msa0639430:CDS 35.0%
!!! GTTTTAGAGGTATGTAAGGA+AGG - chr4_3:35300938-35300957 Msa0639430:intron 35.0%
!! AGTTGAAAGGTGTTGAAGGA+AGG + chr4_3:35299148-35299167 None:intergenic 40.0%
!! CCATAGTTGAAAGGTGTTGA+AGG + chr4_3:35299152-35299171 None:intergenic 40.0%
CCTTCAACACCTTTCAACTA+TGG - chr4_3:35299149-35299168 Msa0639430:three_prime_UTR 40.0%
TCAACACCTTTCAACTATGG+CGG - chr4_3:35299152-35299171 Msa0639430:three_prime_UTR 40.0%
! AGTGATAATGAGTGAGTGTG+TGG + chr4_3:35299184-35299203 None:intergenic 40.0%
AACAACAACAACCACAATGG+AGG - chr4_3:35299403-35299422 Msa0639430:CDS 40.0%
CAAAGGCAAAAACAACGCTA+CGG - chr4_3:35299510-35299529 Msa0639430:CDS 40.0%
!! GATTGTCTCTCAGTTTTGTG+GGG + chr4_3:35299785-35299804 None:intergenic 40.0%
TTGTTATCCTTCTTGGGAAG+TGG + chr4_3:35299846-35299865 None:intergenic 40.0%
TCCCAAGAAGGATAACAAGA+AGG - chr4_3:35299848-35299867 Msa0639430:intron 40.0%
GAAGGATAATGTGACTGTGA+AGG - chr4_3:35300364-35300383 Msa0639430:CDS 40.0%
GAAGCTTAAGAGAAAGGTTG+AGG - chr4_3:35300427-35300446 Msa0639430:intron 40.0%
CAACCAAAGAAAGACAAGGA+AGG - chr4_3:35300455-35300474 Msa0639430:intron 40.0%
AGAAGGATGGAAATGAAGGA+GGG - chr4_3:35300495-35300514 Msa0639430:intron 40.0%
GGAGGTAAGAAGAAGAACAA+GGG - chr4_3:35300524-35300543 Msa0639430:intron 40.0%
GAGGTAAGAAGAAGAACAAG+GGG - chr4_3:35300525-35300544 Msa0639430:intron 40.0%
AGGTAAGAAGAAGAACAAGG+GGG - chr4_3:35300526-35300545 Msa0639430:intron 40.0%
GGTAATAACAATGAAGCAGG+AGG - chr4_3:35300557-35300576 Msa0639430:CDS 40.0%
!! GTTCAACAACCCTTTGGTTT+TGG - chr4_3:35300605-35300624 Msa0639430:CDS 40.0%
!!! CAACCCTTTGGTTTTGGTTA+TGG - chr4_3:35300611-35300630 Msa0639430:CDS 40.0%
CACATGACAATGCAAGCATT+AGG + chr4_3:35300737-35300756 None:intergenic 40.0%
ATTCCATGAGACAGGGAAAA+AGG - chr4_3:35300852-35300871 Msa0639430:CDS 40.0%
TTCCATGAGACAGGGAAAAA+GGG - chr4_3:35300853-35300872 Msa0639430:CDS 40.0%
!! AGTTGAAAGGTGTTGAAGGA+AGG + chr4_3:35299148-35299167 None:intergenic 40.0%
!! CCATAGTTGAAAGGTGTTGA+AGG + chr4_3:35299152-35299171 None:intergenic 40.0%
CCTTCAACACCTTTCAACTA+TGG - chr4_3:35299149-35299168 Msa0639430:three_prime_UTR 40.0%
TCAACACCTTTCAACTATGG+CGG - chr4_3:35299152-35299171 Msa0639430:three_prime_UTR 40.0%
! AGTGATAATGAGTGAGTGTG+TGG + chr4_3:35299184-35299203 None:intergenic 40.0%
AACAACAACAACCACAATGG+AGG - chr4_3:35299403-35299422 Msa0639430:CDS 40.0%
CAAAGGCAAAAACAACGCTA+CGG - chr4_3:35299510-35299529 Msa0639430:CDS 40.0%
!! GATTGTCTCTCAGTTTTGTG+GGG + chr4_3:35299785-35299804 None:intergenic 40.0%
TTGTTATCCTTCTTGGGAAG+TGG + chr4_3:35299846-35299865 None:intergenic 40.0%
TCCCAAGAAGGATAACAAGA+AGG - chr4_3:35299848-35299867 Msa0639430:intron 40.0%
GAAGGATAATGTGACTGTGA+AGG - chr4_3:35300364-35300383 Msa0639430:CDS 40.0%
GAAGCTTAAGAGAAAGGTTG+AGG - chr4_3:35300427-35300446 Msa0639430:intron 40.0%
CAACCAAAGAAAGACAAGGA+AGG - chr4_3:35300455-35300474 Msa0639430:intron 40.0%
AGAAGGATGGAAATGAAGGA+GGG - chr4_3:35300495-35300514 Msa0639430:intron 40.0%
GGAGGTAAGAAGAAGAACAA+GGG - chr4_3:35300524-35300543 Msa0639430:intron 40.0%
GAGGTAAGAAGAAGAACAAG+GGG - chr4_3:35300525-35300544 Msa0639430:intron 40.0%
AGGTAAGAAGAAGAACAAGG+GGG - chr4_3:35300526-35300545 Msa0639430:intron 40.0%
GGTAATAACAATGAAGCAGG+AGG - chr4_3:35300557-35300576 Msa0639430:CDS 40.0%
!! GTTCAACAACCCTTTGGTTT+TGG - chr4_3:35300605-35300624 Msa0639430:CDS 40.0%
!!! CAACCCTTTGGTTTTGGTTA+TGG - chr4_3:35300611-35300630 Msa0639430:CDS 40.0%
CACATGACAATGCAAGCATT+AGG + chr4_3:35300737-35300756 None:intergenic 40.0%
ATTCCATGAGACAGGGAAAA+AGG - chr4_3:35300852-35300871 Msa0639430:CDS 40.0%
TTCCATGAGACAGGGAAAAA+GGG - chr4_3:35300853-35300872 Msa0639430:CDS 40.0%
CAACAACAATGAAGGGACCA+AGG - chr4_3:35299372-35299391 Msa0639430:three_prime_UTR 45.0%
CTTTCTTCTCTCCTCCATTG+TGG + chr4_3:35299417-35299436 None:intergenic 45.0%
GGAGGAGAGAAGAACAACAA+CGG - chr4_3:35299463-35299482 Msa0639430:CDS 45.0%
CAACAACGGAGGAGATAAGA+AGG - chr4_3:35299477-35299496 Msa0639430:CDS 45.0%
! TTTTGTGGGGTCCACATTTC+CGG + chr4_3:35299772-35299791 None:intergenic 45.0%
CATTTCACCACTTCCCAAGA+AGG - chr4_3:35299836-35299855 Msa0639430:intron 45.0%
! TGTGACTGTGAAGGGTACAA+TGG - chr4_3:35300373-35300392 Msa0639430:CDS 45.0%
CCACCTTCCTTGTCTTTCTT+TGG + chr4_3:35300461-35300480 None:intergenic 45.0%
CCAAAGAAAGACAAGGAAGG+TGG - chr4_3:35300458-35300477 Msa0639430:intron 45.0%
AAGAAAGACAAGGAAGGTGG+TGG - chr4_3:35300461-35300480 Msa0639430:intron 45.0%
GGTGAGAAGGATGGAAATGA+AGG - chr4_3:35300491-35300510 Msa0639430:intron 45.0%
GAGAAGGATGGAAATGAAGG+AGG - chr4_3:35300494-35300513 Msa0639430:intron 45.0%
GAAGGATGGAAATGAAGGAG+GGG - chr4_3:35300496-35300515 Msa0639430:intron 45.0%
AAGGATGGAAATGAAGGAGG+GGG - chr4_3:35300497-35300516 Msa0639430:intron 45.0%
GGGAGGTAAGAAGAAGAACA+AGG - chr4_3:35300523-35300542 Msa0639430:intron 45.0%
GGTAAGAAGAAGAACAAGGG+GGG - chr4_3:35300527-35300546 Msa0639430:intron 45.0%
TCCATGAGACAGGGAAAAAG+GGG - chr4_3:35300854-35300873 Msa0639430:CDS 45.0%
CAACAACAATGAAGGGACCA+AGG - chr4_3:35299372-35299391 Msa0639430:three_prime_UTR 45.0%
CTTTCTTCTCTCCTCCATTG+TGG + chr4_3:35299417-35299436 None:intergenic 45.0%
GGAGGAGAGAAGAACAACAA+CGG - chr4_3:35299463-35299482 Msa0639430:CDS 45.0%
CAACAACGGAGGAGATAAGA+AGG - chr4_3:35299477-35299496 Msa0639430:CDS 45.0%
! TTTTGTGGGGTCCACATTTC+CGG + chr4_3:35299772-35299791 None:intergenic 45.0%
CATTTCACCACTTCCCAAGA+AGG - chr4_3:35299836-35299855 Msa0639430:intron 45.0%
! TGTGACTGTGAAGGGTACAA+TGG - chr4_3:35300373-35300392 Msa0639430:CDS 45.0%
CCACCTTCCTTGTCTTTCTT+TGG + chr4_3:35300461-35300480 None:intergenic 45.0%
CCAAAGAAAGACAAGGAAGG+TGG - chr4_3:35300458-35300477 Msa0639430:intron 45.0%
AAGAAAGACAAGGAAGGTGG+TGG - chr4_3:35300461-35300480 Msa0639430:intron 45.0%
GGTGAGAAGGATGGAAATGA+AGG - chr4_3:35300491-35300510 Msa0639430:intron 45.0%
GAGAAGGATGGAAATGAAGG+AGG - chr4_3:35300494-35300513 Msa0639430:intron 45.0%
GAAGGATGGAAATGAAGGAG+GGG - chr4_3:35300496-35300515 Msa0639430:intron 45.0%
AAGGATGGAAATGAAGGAGG+GGG - chr4_3:35300497-35300516 Msa0639430:intron 45.0%
GGGAGGTAAGAAGAAGAACA+AGG - chr4_3:35300523-35300542 Msa0639430:intron 45.0%
GGTAAGAAGAAGAACAAGGG+GGG - chr4_3:35300527-35300546 Msa0639430:intron 45.0%
TCCATGAGACAGGGAAAAAG+GGG - chr4_3:35300854-35300873 Msa0639430:CDS 45.0%
!!! AATGATTTATTTTAATTTTT+TGG - chr4_3:35299993-35300012 Msa0639430:CDS 5.0%
!!! AATGATTTATTTTAATTTTT+TGG - chr4_3:35299993-35300012 Msa0639430:CDS 5.0%
GGAGAGAAGAACAACAACGG+AGG - chr4_3:35299466-35299485 Msa0639430:CDS 50.0%
GTGAAAGCAGAGTGTGAGAC+CGG - chr4_3:35299732-35299751 Msa0639430:CDS 50.0%
ACCGGAAAAGTAACCGTCAC+CGG - chr4_3:35299750-35299769 Msa0639430:CDS 50.0%
!!! TCCGGTGACGGTTACTTTTC+CGG + chr4_3:35299754-35299773 None:intergenic 50.0%
AGTAACCGTCACCGGAAATG+TGG - chr4_3:35299758-35299777 Msa0639430:CDS 50.0%
! AAAGACAAGGAAGGTGGTGG+TGG - chr4_3:35300464-35300483 Msa0639430:intron 50.0%
ATGGAAATGAAGGAGGGGGT+GGG - chr4_3:35300501-35300520 Msa0639430:intron 50.0%
AAGAAGAAGAACAAGGGGGG+TGG - chr4_3:35300530-35300549 Msa0639430:intron 50.0%
! ACCCCTTTTTCCCTGTCTCA+TGG + chr4_3:35300858-35300877 None:intergenic 50.0%
GGAGAGAAGAACAACAACGG+AGG - chr4_3:35299466-35299485 Msa0639430:CDS 50.0%
GTGAAAGCAGAGTGTGAGAC+CGG - chr4_3:35299732-35299751 Msa0639430:CDS 50.0%
ACCGGAAAAGTAACCGTCAC+CGG - chr4_3:35299750-35299769 Msa0639430:CDS 50.0%
!!! TCCGGTGACGGTTACTTTTC+CGG + chr4_3:35299754-35299773 None:intergenic 50.0%
AGTAACCGTCACCGGAAATG+TGG - chr4_3:35299758-35299777 Msa0639430:CDS 50.0%
! AAAGACAAGGAAGGTGGTGG+TGG - chr4_3:35300464-35300483 Msa0639430:intron 50.0%
ATGGAAATGAAGGAGGGGGT+GGG - chr4_3:35300501-35300520 Msa0639430:intron 50.0%
AAGAAGAAGAACAAGGGGGG+TGG - chr4_3:35300530-35300549 Msa0639430:intron 50.0%
! ACCCCTTTTTCCCTGTCTCA+TGG + chr4_3:35300858-35300877 None:intergenic 50.0%
GATGGAAATGAAGGAGGGGG+TGG - chr4_3:35300500-35300519 Msa0639430:intron 55.0%
TGGAAATGAAGGAGGGGGTG+GGG - chr4_3:35300502-35300521 Msa0639430:intron 55.0%
AAGAACAAGGGGGGTGGAGA+TGG - chr4_3:35300536-35300555 Msa0639430:intron 55.0%
GATGGAAATGAAGGAGGGGG+TGG - chr4_3:35300500-35300519 Msa0639430:intron 55.0%
TGGAAATGAAGGAGGGGGTG+GGG - chr4_3:35300502-35300521 Msa0639430:intron 55.0%
AAGAACAAGGGGGGTGGAGA+TGG - chr4_3:35300536-35300555 Msa0639430:intron 55.0%
GGGGTCCACATTTCCGGTGA+CGG + chr4_3:35299766-35299785 None:intergenic 60.0%
!! GACAAGGAAGGTGGTGGTGG+TGG - chr4_3:35300467-35300486 Msa0639430:intron 60.0%
!! AAGGAAGGTGGTGGTGGTGG+TGG - chr4_3:35300470-35300489 Msa0639430:intron 60.0%
!! TGGTGGTGGTGGTGGTGAGA+AGG - chr4_3:35300478-35300497 Msa0639430:intron 60.0%
!! GGTGGTGGTGGTGAGAAGGA+TGG - chr4_3:35300482-35300501 Msa0639430:intron 60.0%
GGAAATGAAGGAGGGGGTGG+GGG - chr4_3:35300503-35300522 Msa0639430:intron 60.0%
GGGGTCCACATTTCCGGTGA+CGG + chr4_3:35299766-35299785 None:intergenic 60.0%
!! GACAAGGAAGGTGGTGGTGG+TGG - chr4_3:35300467-35300486 Msa0639430:intron 60.0%
!! AAGGAAGGTGGTGGTGGTGG+TGG - chr4_3:35300470-35300489 Msa0639430:intron 60.0%
!! TGGTGGTGGTGGTGGTGAGA+AGG - chr4_3:35300478-35300497 Msa0639430:intron 60.0%
!! GGTGGTGGTGGTGAGAAGGA+TGG - chr4_3:35300482-35300501 Msa0639430:intron 60.0%
GGAAATGAAGGAGGGGGTGG+GGG - chr4_3:35300503-35300522 Msa0639430:intron 60.0%
AATGAAGGAGGGGGTGGGGG+AGG - chr4_3:35300506-35300525 Msa0639430:intron 65.0%
AATGAAGGAGGGGGTGGGGG+AGG - chr4_3:35300506-35300525 Msa0639430:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 35299076 35301082 35299076 ID=Msa0639430;Name=Msa0639430
chr4_3 mRNA 35299076 35301082 35299076 ID=Msa0639430-mRNA-1;Parent=Msa0639430;Name=Msa0639430-mRNA-1;_AED=0.07;_eAED=0.07;_QI=92|1|1|1|1|1|5|325|345
chr4_3 exon 35299076 35299822 35299076 ID=Msa0639430-mRNA-1:exon:8295;Parent=Msa0639430-mRNA-1
chr4_3 exon 35299952 35300036 35299952 ID=Msa0639430-mRNA-1:exon:8294;Parent=Msa0639430-mRNA-1
chr4_3 exon 35300235 35300437 35300235 ID=Msa0639430-mRNA-1:exon:8293;Parent=Msa0639430-mRNA-1
chr4_3 exon 35300557 35300878 35300557 ID=Msa0639430-mRNA-1:exon:8292;Parent=Msa0639430-mRNA-1
chr4_3 exon 35300985 35301082 35300985 ID=Msa0639430-mRNA-1:exon:8291;Parent=Msa0639430-mRNA-1
chr4_3 five_prime_UTR 35300991 35301082 35300991 ID=Msa0639430-mRNA-1:five_prime_utr;Parent=Msa0639430-mRNA-1
chr4_3 CDS 35300985 35300990 35300985 ID=Msa0639430-mRNA-1:cds;Parent=Msa0639430-mRNA-1
chr4_3 CDS 35300557 35300878 35300557 ID=Msa0639430-mRNA-1:cds;Parent=Msa0639430-mRNA-1
chr4_3 CDS 35300235 35300437 35300235 ID=Msa0639430-mRNA-1:cds;Parent=Msa0639430-mRNA-1
chr4_3 CDS 35299952 35300036 35299952 ID=Msa0639430-mRNA-1:cds;Parent=Msa0639430-mRNA-1
chr4_3 CDS 35299401 35299822 35299401 ID=Msa0639430-mRNA-1:cds;Parent=Msa0639430-mRNA-1
chr4_3 three_prime_UTR 35299076 35299400 35299076 ID=Msa0639430-mRNA-1:three_prime_utr;Parent=Msa0639430-mRNA-1
Gene Sequence

>Msa0639430

ATGGCGAAGAAGAAAAATAAAGGAGGAAATGGTGGAAATAATGCTGAAAACAACAACAACAACAACAACAATGGTGAGAACAAAGAAGAAAACAACAACAACAACAATGAAGGGACCAAGGAAGAAAACAACAACAACAACCACAATGGAGGAGAGAAGAAAGAAGAAAACAACAAAAACAACAACAATGGAGGAGAGAAGAACAACAACGGAGGAGATAAGAAGGAAGAGAACAACAAAGGCAAAAACAACGCTACGGTTTTGAAAGTCTATATGCATTGCGAAGGTTGCGCTAACAAAGTCACCAAACACCTTAACAGCATCAAAGGTGTTGATACGGTGAAAGCAGAGTGTGAGACCGGAAAAGTAACCGTCACCGGAAATGTGGACCCCACAAAACTGAGAGACAATCTTGCTGAGAAGATAAAGAAGAAAGTTGAACTCATTTCACCACTTCCCAAGAAGGATAACAAGAAGGAAAATGAACCAAACAAAAAATCTGATGAGAAGAAAAATGAAGACAAAAAAGAGTCAATTACCACTTCTGTTTTGAAATTGGTACTACACTGTCAAGGATGTATTGATAAGATTGGGAAAATTGTTATGAAAACTAAAGGAGTGCTTGAAATGAAAGTTGATAAAGAGAAGGATAATGTGACTGTGAAGGGTACAATGGATGTGAAAAAGCTAGTTGAGAATTTATCACAGAAGCTTAAGAGAAAGGTTGAGGTAGTTCAACCAAAGAAAGACAAGGAAGGTGGTGGTGGTGGTGGTGAGAAGGATGGAAATGAAGGAGGGGGTGGGGGAGGTAAGAAGAAGAACAAGGGGGGTGGAGATGGTAATAACAATGAAGCAGGAGGAGAAGTTAAGATAATGGAGTATATGGTTCAACAACCCTTTGGTTTTGGTTATGGAAATGTAAATGTTGAAGGGTATAATGCTGCACAAGTCTACCAAGAGATGTTAAATATTCATATGCAAACACAACCACCACAAATGTTTAGTGATGAGAATCCTAATGCTTGCATTGTCATGTGA

Protein sequence

>Msa0639430

MAKKKNKGGNGGNNAENNNNNNNNGENKEENNNNNNEGTKEENNNNNHNGGEKKEENNKNNNNGGEKNNNGGDKKEENNKGKNNATVLKVYMHCEGCANKVTKHLNSIKGVDTVKAECETGKVTVTGNVDPTKLRDNLAEKIKKKVELISPLPKKDNKKENEPNKKSDEKKNEDKKESITTSVLKLVLHCQGCIDKIGKIVMKTKGVLEMKVDKEKDNVTVKGTMDVKKLVENLSQKLKRKVEVVQPKKDKEGGGGGGEKDGNEGGGGGGKKKNKGGGDGNNNEAGGEVKIMEYMVQQPFGFGYGNVNVEGYNAAQVYQEMLNIHMQTQPPQMFSDENPNACIVM*