AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003526

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003526.t1 MTR_4g073730 95.706 326 14 0 1 326 1 326 0.0 636
MS.gene003526.t1 MTR_4g073730 96.181 288 11 0 1 288 1 288 0.0 568
MS.gene003526.t1 MTR_1g025420 53.918 319 131 5 5 309 4 320 1.68e-114 334
MS.gene003526.t1 MTR_8g037890 62.857 245 82 3 5 248 11 247 9.02e-112 327
MS.gene003526.t1 MTR_8g056820 62.857 245 82 3 5 248 11 247 2.39e-109 319
MS.gene003526.t1 MTR_5g022310 57.857 280 112 4 3 280 6 281 1.78e-108 318
MS.gene003526.t1 MTR_1g025420 61.847 249 92 3 5 252 4 250 1.95e-108 317
MS.gene003526.t1 MTR_5g022310 62.000 250 91 3 3 250 6 253 1.02e-107 315
MS.gene003526.t1 MTR_3g114030 63.636 231 82 2 19 248 1 230 2.30e-104 305
MS.gene003526.t1 MTR_8g075550 64.807 233 77 3 19 247 22 253 2.95e-104 308
MS.gene003526.t1 MTR_4g073720 55.510 245 99 4 5 247 3 239 7.87e-90 272
MS.gene003526.t1 MTR_5g022350 55.918 245 90 5 5 249 18 244 6.89e-88 266
MS.gene003526.t1 MTR_8g075510 53.846 247 98 6 3 248 13 244 6.08e-85 256
MS.gene003526.t1 MTR_8g075510 53.659 246 98 6 3 247 13 243 1.26e-83 255
MS.gene003526.t1 MTR_7g102380 52.489 221 100 4 29 248 25 241 1.04e-78 240
MS.gene003526.t1 MTR_2g067980 51.587 252 113 5 1 248 1 247 1.65e-78 259
MS.gene003526.t1 MTR_8g036215 52.321 237 108 4 11 247 6 237 1.93e-77 237
MS.gene003526.t1 MTR_2g068655 50.431 232 109 3 27 257 33 259 6.23e-77 238
MS.gene003526.t1 MTR_2g069660 50.000 246 114 5 5 248 5 243 7.03e-77 236
MS.gene003526.t1 MTR_6g079580 49.194 248 118 5 1 248 1 240 1.06e-75 233
MS.gene003526.t1 MTR_1g062590 49.372 239 114 5 11 248 10 242 5.65e-75 231
MS.gene003526.t1 MTR_1g062630 48.031 254 122 6 11 260 10 257 7.78e-74 228
MS.gene003526.t1 MTR_2g068030 48.918 231 112 4 19 247 17 243 9.12e-74 228
MS.gene003526.t1 MTR_1g021945 53.982 226 96 5 25 248 26 245 1.39e-72 225
MS.gene003526.t1 MTR_1g062660 48.945 237 115 5 14 248 10 242 2.25e-72 224
MS.gene003526.t1 MTR_1g062350 48.954 239 115 5 11 248 10 242 3.12e-72 224
MS.gene003526.t1 MTR_1g062370 48.536 239 116 5 11 248 10 242 5.08e-72 223
MS.gene003526.t1 MTR_8g107140 49.590 244 116 6 5 248 9 245 7.24e-70 218
MS.gene003526.t1 MTR_1g062340 49.321 221 107 4 29 248 26 242 2.82e-69 216
MS.gene003526.t1 MTR_3g111620 51.556 225 103 5 25 248 27 246 4.29e-68 213
MS.gene003526.t1 MTR_3g068015 42.105 247 136 5 4 248 7 248 1.23e-62 199
MS.gene003526.t1 MTR_7g062610 42.276 246 133 5 6 250 7 244 6.13e-61 195
MS.gene003526.t1 MTR_6g009480 44.130 247 131 6 5 248 10 252 1.04e-60 195
MS.gene003526.t1 MTR_5g059200 44.622 251 123 8 1 247 1 239 3.39e-59 192
MS.gene003526.t1 MTR_4g063630 39.749 239 138 6 12 247 16 251 9.56e-58 187
MS.gene003526.t1 MTR_1g062690 43.096 239 105 6 11 248 10 218 3.73e-57 184
MS.gene003526.t1 MTR_2g067990 47.162 229 89 10 22 248 24 222 1.07e-52 186
MS.gene003526.t1 MTR_5g023850 40.562 249 103 6 3 248 10 216 7.46e-52 171
MS.gene003526.t1 MTR_5g010635 41.485 229 108 8 23 249 22 226 1.30e-46 158
MS.gene003526.t1 MTR_5g022350 55.263 152 56 4 5 156 83 222 5.28e-46 155
MS.gene003526.t1 MTR_5g010640 38.710 248 122 9 9 248 11 236 1.08e-45 155
MS.gene003526.t1 MTR_8g096900 39.759 249 113 10 4 248 33 248 4.11e-45 154
MS.gene003526.t1 MTR_2g067970 45.405 185 92 6 68 248 3 182 7.81e-44 160
MS.gene003526.t1 MTR_2g063150 29.675 246 162 5 4 244 9 248 2.22e-34 126
MS.gene003526.t1 MTR_7g076360 32.883 222 83 4 23 244 6 161 5.08e-33 120
MS.gene003526.t1 MTR_1g062390 32.016 253 152 7 1 248 1 238 2.93e-31 118
MS.gene003526.t1 MTR_8g089020 45.926 135 66 3 109 243 32 159 4.18e-31 115
MS.gene003526.t1 MTR_8g096910 42.754 138 66 6 5 140 3 129 2.45e-27 105
MS.gene003526.t1 MTR_8g096920 44.203 138 66 6 6 142 1 128 9.32e-25 99.0
MS.gene003526.t1 MTR_3g081550 46.591 88 46 1 110 197 16 102 4.44e-18 79.0
MS.gene003526.t1 MTR_1g062640 40.964 83 48 1 84 166 65 146 7.73e-14 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003526.t1 AT4G38670 73.239 284 68 6 1 281 2 280 2.13e-147 416
MS.gene003526.t1 AT4G38670 73.239 284 68 6 1 281 2 280 2.13e-147 416
MS.gene003526.t1 AT4G38670 74.060 266 64 4 19 281 1 264 6.89e-143 404
MS.gene003526.t1 AT1G75800 59.364 283 109 4 6 286 5 283 5.80e-114 333
MS.gene003526.t1 AT4G36010 65.000 240 76 3 22 255 20 257 3.90e-106 312
MS.gene003526.t1 AT4G36010 65.000 240 76 3 22 255 20 257 3.90e-106 312
MS.gene003526.t1 AT1G20030 63.136 236 85 2 22 255 17 252 2.51e-105 311
MS.gene003526.t1 AT2G17860 61.200 250 87 3 4 250 9 251 4.27e-105 308
MS.gene003526.t1 AT1G20030 63.793 232 82 2 26 255 4 235 7.80e-105 309
MS.gene003526.t1 AT4G24180 52.708 277 111 6 6 268 12 282 9.65e-92 276
MS.gene003526.t1 AT4G24180 52.727 275 109 6 6 268 12 277 1.06e-91 276
MS.gene003526.t1 AT4G24180 54.980 251 99 4 6 248 12 256 1.06e-90 271
MS.gene003526.t1 AT4G24180 55.020 249 97 4 6 248 12 251 1.14e-90 271
MS.gene003526.t1 AT4G38660 57.613 243 89 5 12 248 11 245 1.04e-87 267
MS.gene003526.t1 AT4G38660 59.375 224 83 3 25 248 8 223 1.60e-87 266
MS.gene003526.t1 AT5G38280 44.482 299 144 4 4 300 5 283 2.13e-84 268
MS.gene003526.t1 AT5G38280 44.482 299 144 4 4 300 5 283 3.87e-84 267
MS.gene003526.t1 AT4G24180 54.237 236 94 4 6 233 12 241 1.17e-81 251
MS.gene003526.t1 AT4G24180 54.274 234 92 4 6 233 12 236 1.67e-81 250
MS.gene003526.t1 AT5G24620 52.174 253 114 6 1 248 1 251 4.49e-81 252
MS.gene003526.t1 AT5G24620 52.174 253 114 6 1 248 56 306 1.02e-80 253
MS.gene003526.t1 AT5G24620 52.174 253 114 6 1 248 77 327 1.57e-80 253
MS.gene003526.t1 AT1G19320 51.837 245 106 6 8 247 9 246 2.73e-76 234
MS.gene003526.t1 AT1G75030 50.410 244 113 7 6 248 7 243 4.17e-75 231
MS.gene003526.t1 AT1G75050 50.206 243 115 6 6 248 7 243 1.56e-72 224
MS.gene003526.t1 AT1G75040 50.617 243 110 6 6 248 7 239 5.00e-72 223
MS.gene003526.t1 AT1G18250 48.472 229 113 4 20 248 16 239 1.76e-69 217
MS.gene003526.t1 AT1G18250 50.459 218 103 4 31 248 28 240 5.54e-69 216
MS.gene003526.t1 AT1G73620 49.561 228 110 5 21 248 38 260 2.43e-68 214
MS.gene003526.t1 AT1G77700 46.694 242 116 7 6 247 43 271 2.69e-63 203
MS.gene003526.t1 AT1G77700 46.694 242 116 7 6 247 43 271 3.61e-63 203
MS.gene003526.t1 AT2G28790 44.813 241 122 8 13 247 38 273 6.73e-62 198
MS.gene003526.t1 AT2G28790 44.813 241 122 8 13 247 13 248 8.20e-62 197
MS.gene003526.t1 AT1G77700 48.416 221 102 6 27 247 91 299 4.10e-61 199
MS.gene003526.t1 AT5G02140 42.169 249 137 4 9 256 7 249 1.27e-58 191
MS.gene003526.t1 AT5G02140 43.154 241 130 4 9 248 7 241 1.80e-58 189
MS.gene003526.t1 AT5G40020 42.041 245 137 4 5 248 8 248 3.52e-58 188
MS.gene003526.t1 AT4G36000 45.374 227 89 6 101 326 1 193 5.86e-57 183
MS.gene003526.t1 AT4G36000 45.374 227 89 6 101 326 1 193 5.86e-57 183
MS.gene003526.t1 AT4G18253 40.244 246 131 6 5 248 7 238 3.70e-56 182
MS.gene003526.t1 AT1G70250 42.795 229 118 7 26 248 146 367 1.97e-52 184
MS.gene003526.t1 AT4G18250 38.796 299 160 10 6 299 40 320 6.43e-49 174
MS.gene003526.t1 AT4G11650 40.000 245 121 8 5 248 4 223 1.64e-48 163
MS.gene003526.t1 AT5G24620 54.167 120 52 2 132 248 15 134 1.44e-37 136
MS.gene003526.t1 AT2G24810 58.667 75 31 0 173 247 118 192 2.04e-23 95.9

Find 96 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGACCCGACCAAGCTTTC+GGG 0.192121 4.3:-33183975 None:intergenic
AAGCTTGGTCGGGTCGAATA+TGG 0.205954 4.3:+33183980 MS.gene003526:CDS
GAGCCATAAACAGTGTTAAA+AGG 0.243154 4.3:-33186691 None:intergenic
GGTTGTCTTGTGGATCTTAA+TGG 0.253676 4.3:+33184771 MS.gene003526:CDS
GAGAGTTTGTACCTTGTATA+AGG 0.298064 4.3:-33185053 None:intergenic
ATTCGACCCGACCAAGCTTT+CGG 0.299164 4.3:-33183976 None:intergenic
AGAAGCGCGTGTGAGGCTTT+TGG 0.317232 4.3:+33184855 MS.gene003526:CDS
TGTTTATGGCTCACTTTGTA+TGG 0.329349 4.3:+33186702 MS.gene003526:CDS
CGCTAATGTTGCCGGAGGTT+TGG 0.332441 4.3:-33184097 None:intergenic
ACAAGTGCCGTTACACAATA+TGG 0.350341 4.3:+33183866 MS.gene003526:CDS
CTTACATTATCTTTCCTCTC+AGG 0.391595 4.3:+33183718 MS.gene003526:CDS
GTGAACTCCGCTAATGTTGC+CGG 0.404349 4.3:-33184105 None:intergenic
CGTGGGAATGGGAGTGGCAG+TGG 0.422771 4.3:+33184822 MS.gene003526:CDS
TTGAAGGTGGCGCGTGGGAA+TGG 0.425944 4.3:+33184810 MS.gene003526:CDS
GTGAATCCGGTGGTGGGTAG+CGG 0.426509 4.3:-33183919 None:intergenic
AAAGTAGCCTGCGCCGGTGG+TGG 0.426609 4.3:+33184072 MS.gene003526:CDS
TACTTGTCAAAACAACATTC+TGG 0.427034 4.3:+33186586 MS.gene003526:CDS
AGCTTGGTCGGGTCGAATAT+GGG 0.433087 4.3:+33183981 MS.gene003526:CDS
CAGTGTTAAAAGGGCATGAC+AGG 0.438064 4.3:-33186681 None:intergenic
GTGGCGCCGGAGAGTAATCC+TGG 0.438241 4.3:-33183889 None:intergenic
AGAGGTGGCTGCAGCGCTAC+TGG 0.439408 4.3:+33184750 MS.gene003526:CDS
ACCGGCGCAGGCTACTTTGC+CGG 0.441145 4.3:-33184067 None:intergenic
GGACTTCTATGACGTGAGTT+TGG 0.449006 4.3:+33184149 MS.gene003526:CDS
TTTGAGGGTGAATCCGGTGG+TGG 0.449715 4.3:-33183926 None:intergenic
CAACCCATCAGCTCCGTTCA+AGG 0.457843 4.3:-33184127 None:intergenic
CACAAGCTATAATCTGCGTT+TGG 0.458363 4.3:-33186633 None:intergenic
TGAAGGTGGCGCGTGGGAAT+GGG 0.462706 4.3:+33184811 MS.gene003526:CDS
GTGGCGCGTGGGAATGGGAG+TGG 0.468651 4.3:+33184816 MS.gene003526:CDS
CCCTCAAAAGTGGAAATTCA+AGG 0.472387 4.3:+33183941 MS.gene003526:CDS
TGGTTGTCCGGTGGATTTGA+AGG 0.475420 4.3:+33184794 MS.gene003526:CDS
TTCACCTTGAACGGAGCTGA+TGG 0.479580 4.3:+33184123 MS.gene003526:CDS
GGTGGGTAGCGGCGGTGAAG+TGG 0.480296 4.3:-33183908 None:intergenic
TCACTTTGTATGGACACTTC+AGG 0.483327 4.3:+33186712 MS.gene003526:CDS
GTGTTGGGAGCAAGGAAAGA+TGG 0.483447 4.3:+33186529 MS.gene003526:CDS
CGGTGGTGGTGCCAAACCTC+CGG 0.485749 4.3:+33184086 MS.gene003526:CDS
CGGAGGTTTGGCACCACCAC+CGG 0.488085 4.3:-33184085 None:intergenic
ATAGAAGGACCACACGTGTC+AGG 0.491976 4.3:-33184915 None:intergenic
CTGAGAGGAAAGATAATGTA+AGG 0.492145 4.3:-33183717 None:intergenic
AGCCATAAACAGTGTTAAAA+GGG 0.495668 4.3:-33186690 None:intergenic
CTATACAAATCCCGAAAGCT+TGG 0.496270 4.3:+33183965 MS.gene003526:CDS
ATCACCGCAGACTGTGGCTC+CGG 0.500430 4.3:+33184048 MS.gene003526:CDS
CAGCGCTACTGGTTGTCTTG+TGG 0.515275 4.3:+33184761 MS.gene003526:CDS
GGATCTTAATGGTGGTTGTC+CGG 0.517771 4.3:+33184782 MS.gene003526:CDS
ACCGGATTCACCCTCAAAAG+TGG 0.519297 4.3:+33183931 MS.gene003526:CDS
GTGGATTTGAAGGTGGCGCG+TGG 0.524437 4.3:+33184804 MS.gene003526:CDS
TGCCGTTACACAATATGGCC+AGG 0.524801 4.3:+33183871 MS.gene003526:CDS
AATCCGGTGGTGGGTAGCGG+CGG 0.527239 4.3:-33183916 None:intergenic
TTTGCCCCTTGCCTTATACA+AGG 0.531616 4.3:+33185042 MS.gene003526:CDS
TATGACGTGAGTTTGGTTGA+CGG 0.532680 4.3:+33184156 MS.gene003526:CDS
TGCTGATTGTGGCGAAAGGA+GGG 0.536940 4.3:+33184724 MS.gene003526:CDS
TTTGGCACCACCACCGGCGC+AGG 0.537590 4.3:-33184079 None:intergenic
TTGTACCTTGTATAAGGCAA+GGG 0.539123 4.3:-33185047 None:intergenic
TCCGGCAAAGTAGCCTGCGC+CGG 0.541271 4.3:+33184066 MS.gene003526:CDS
TGCGTGTAGAAGCGCGTGTG+AGG 0.544201 4.3:+33184848 MS.gene003526:CDS
GGAAGCACATGTGTAAGTAC+TGG 0.544486 4.3:-33185000 None:intergenic
CGCGCCACCTTCAAATCCAC+CGG 0.546086 4.3:-33184801 None:intergenic
ACAAATCCCGAAAGCTTGGT+CGG 0.551000 4.3:+33183969 MS.gene003526:CDS
TTAGCGGAGTTCACCTTGAA+CGG 0.552950 4.3:+33184114 MS.gene003526:CDS
CTTGAACGGAGCTGATGGGT+TGG 0.554103 4.3:+33184128 MS.gene003526:CDS
TAGCGGCGGTGAAGTGGCGC+CGG 0.556355 4.3:-33183902 None:intergenic
CAAATCCCGAAAGCTTGGTC+GGG 0.556414 4.3:+33183970 MS.gene003526:CDS
TAATATTCCGATGCTGATTG+TGG 0.561283 4.3:+33184713 MS.gene003526:CDS
ATGCTGATTGTGGCGAAAGG+AGG 0.563722 4.3:+33184723 MS.gene003526:CDS
CAAACCTCCGGCAACATTAG+CGG 0.565190 4.3:+33184098 MS.gene003526:CDS
TTTGTACCTTGTATAAGGCA+AGG 0.566917 4.3:-33185048 None:intergenic
GGCAAAGTAGCCTGCGCCGG+TGG 0.567472 4.3:+33184069 MS.gene003526:CDS
TCACCGCCGCTACCCACCAC+CGG 0.567829 4.3:+33183913 MS.gene003526:CDS
GCGAAAGGAGGGACGAGAGG+TGG 0.576149 4.3:+33184735 MS.gene003526:CDS
TCACCTTGAACGGAGCTGAT+GGG 0.579389 4.3:+33184124 MS.gene003526:CDS
TCTGGCGGTTCTTCATCGAA+AGG 0.589806 4.3:+33186604 MS.gene003526:CDS
ACGAAGATTGTTTACCTGAG+AGG 0.591768 4.3:-33183732 None:intergenic
TTGAGGGTGAATCCGGTGGT+GGG 0.595856 4.3:-33183925 None:intergenic
TGTCTTGTGGATCTTAATGG+TGG 0.605370 4.3:+33184774 MS.gene003526:CDS
ATATGGCCAGGATTACTCTC+CGG 0.607890 4.3:+33183883 MS.gene003526:CDS
AACTCCGCTAATGTTGCCGG+AGG 0.608625 4.3:-33184102 None:intergenic
TCTTAATGGTGGTTGTCCGG+TGG 0.609618 4.3:+33184785 MS.gene003526:CDS
TCATGTATCACCGCAGACTG+TGG 0.613074 4.3:+33184042 MS.gene003526:CDS
TACGCGTAGCTATAAGAGCG+TGG 0.613171 4.3:-33184966 None:intergenic
ACGCGTAGCTATAAGAGCGT+GGG 0.618064 4.3:-33184965 None:intergenic
CCTTTCGCCACAATCAGCAT+CGG 0.620311 4.3:-33184720 None:intergenic
TTGTGTTACCTCTATTGCTG+TGG 0.620710 4.3:+33186651 MS.gene003526:CDS
CCGATGCTGATTGTGGCGAA+AGG 0.629640 4.3:+33184720 MS.gene003526:CDS
AAACACGATCAAATAGTTAG+CGG 0.630534 4.3:-33185021 None:intergenic
TGGATTTGAAGGTGGCGCGT+GGG 0.631113 4.3:+33184805 MS.gene003526:CDS
TCTCTGCGGTCAAGACTCTG+AGG 0.631771 4.3:+33184011 MS.gene003526:CDS
TGTACCTTGTATAAGGCAAG+GGG 0.631956 4.3:-33185046 None:intergenic
TCCTCGCTATTGTTGTAGTG+AGG 0.634828 4.3:+33184881 MS.gene003526:CDS
ATCCTGGCCATATTGTGTAA+CGG 0.635375 4.3:-33183873 None:intergenic
GTGGCGAAAGGAGGGACGAG+AGG 0.637443 4.3:+33184732 MS.gene003526:CDS
TTGTCCGGTGGATTTGAAGG+TGG 0.644144 4.3:+33184797 MS.gene003526:CDS
TTTGCCGGAGCCACAGTCTG+CGG 0.644934 4.3:-33184052 None:intergenic
TATTCTACGCCTGACACGTG+TGG 0.659755 4.3:+33184906 MS.gene003526:CDS
CTCTGCGGTCAAGACTCTGA+GGG 0.675816 4.3:+33184012 MS.gene003526:CDS
ATATGGGCACGAACTCTCTG+CGG 0.685254 4.3:+33183997 MS.gene003526:CDS
TTGTCAAAACAACATTCTGG+CGG 0.691588 4.3:+33186589 MS.gene003526:CDS
TCCTCACTACAACAATAGCG+AGG 0.701705 4.3:-33184882 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATAAAAGTGTTTAATA+TGG + chr4.3:33186063-33186082 MS.gene003526:intron 10.0%
!!! TATATTTTAATGTTATGTTA+GGG + chr4.3:33186028-33186047 MS.gene003526:intron 10.0%
!! AAATAAACATTAAACAAAAG+TGG - chr4.3:33185225-33185244 None:intergenic 15.0%
!! ATAATCAAAAGCTAAAAAAA+TGG - chr4.3:33185106-33185125 None:intergenic 15.0%
!! CTAACATAACATTAAAATAT+AGG - chr4.3:33186029-33186048 None:intergenic 15.0%
!!! CTATATTTTAATGTTATGTT+AGG + chr4.3:33186027-33186046 MS.gene003526:intron 15.0%
!!! TATTGTTATTATTGGTATAA+AGG + chr4.3:33184327-33184346 MS.gene003526:intron 15.0%
!!! TCTCAAAATATTGTTATTAT+TGG + chr4.3:33184319-33184338 MS.gene003526:intron 15.0%
!!! TTAAGCATATTTTATATATG+TGG - chr4.3:33186242-33186261 None:intergenic 15.0%
!! AAAATATAGGCATATTAATC+TGG - chr4.3:33186016-33186035 None:intergenic 20.0%
!! AGTCTCTAATTAAAATACAT+AGG - chr4.3:33185158-33185177 None:intergenic 20.0%
!! ATAATCCAATTATTAGCATA+TGG - chr4.3:33185559-33185578 None:intergenic 20.0%
!! ATGAATATATCTATAGTGAT+AGG + chr4.3:33185408-33185427 MS.gene003526:intron 20.0%
!! ATTTCATCAAATTTGAAGAA+AGG - chr4.3:33184358-33184377 None:intergenic 20.0%
!! TAAAATTGAATTTGAGAAAG+AGG - chr4.3:33186145-33186164 None:intergenic 20.0%
!!! AATCACATAAGACAATTTTT+TGG + chr4.3:33186392-33186411 MS.gene003526:intron 20.0%
!!! ACACTTTTATTTATTCAATG+TGG - chr4.3:33186057-33186076 None:intergenic 20.0%
!!! ATCACATAAGACAATTTTTT+GGG + chr4.3:33186393-33186412 MS.gene003526:intron 20.0%
!!! CAACTATTTTTCATAATTCA+AGG - chr4.3:33185814-33185833 None:intergenic 20.0%
!!! CACTTTTATTTATTCAATGT+GGG - chr4.3:33186056-33186075 None:intergenic 20.0%
! AAAATTTCTTTGTGCTTGAT+AGG + chr4.3:33184687-33184706 MS.gene003526:intron 25.0%
! AAGATATCTACTCGAATTAA+AGG + chr4.3:33185443-33185462 MS.gene003526:intron 25.0%
! AGAGTTACATTTGATTCAAT+TGG + chr4.3:33184545-33184564 MS.gene003526:intron 25.0%
! AGATATCTACTCGAATTAAA+GGG + chr4.3:33185444-33185463 MS.gene003526:intron 25.0%
! CACATATAAAAGACGATTTA+AGG - chr4.3:33186277-33186296 None:intergenic 25.0%
! CATTACAAGAAAAAACAACA+AGG - chr4.3:33186354-33186373 None:intergenic 25.0%
! CCATGACTAATATAAAATTG+CGG - chr4.3:33185945-33185964 None:intergenic 25.0%
! CTATAGTGATAGGAAAAAAA+CGG + chr4.3:33185418-33185437 MS.gene003526:intron 25.0%
! GAATTGTATCTATATAAGCA+CGG + chr4.3:33184216-33184235 MS.gene003526:intron 25.0%
! GTTATGGAAAAACATTTGTT+GGG + chr4.3:33185659-33185678 MS.gene003526:intron 25.0%
! TATTAGTCATGGGAAAAATA+TGG + chr4.3:33185953-33185972 MS.gene003526:intron 25.0%
! TCATAATTCAAGGTAGAAAA+TGG - chr4.3:33185804-33185823 None:intergenic 25.0%
! TGTTATGGAAAAACATTTGT+TGG + chr4.3:33185658-33185677 MS.gene003526:intron 25.0%
!! ACATTAAACAAAAGTGGATT+TGG - chr4.3:33185219-33185238 None:intergenic 25.0%
!! ATCAAGCACAAAGAAATTTT+AGG - chr4.3:33184687-33184706 None:intergenic 25.0%
!! CGCAATTTTATATTAGTCAT+GGG + chr4.3:33185943-33185962 MS.gene003526:intron 25.0%
!!! ATCATAGTTTTGTTTACAAG+AGG - chr4.3:33186565-33186584 None:intergenic 25.0%
!!! CTTGTTGTTTTTTCTTGTAA+TGG + chr4.3:33186352-33186371 MS.gene003526:intron 25.0%
!!! CTTTTTTGTTGCTAAATCAA+AGG - chr4.3:33185713-33185732 None:intergenic 25.0%
!!! TCACATAAGACAATTTTTTG+GGG + chr4.3:33186394-33186413 MS.gene003526:intron 25.0%
!!! TTGGATTATTTCTATCAACA+TGG + chr4.3:33185570-33185589 MS.gene003526:intron 25.0%
!!! TTTAACTTCACTTTGCTATT+TGG + chr4.3:33183795-33183814 MS.gene003526:intron 25.0%
AAAAAAGAGTCAGATAACGT+AGG + chr4.3:33185726-33185745 MS.gene003526:intron 30.0%
AAAAACAGCGAGTAAATAGA+AGG - chr4.3:33184933-33184952 None:intergenic 30.0%
AAACACGATCAAATAGTTAG+CGG - chr4.3:33185024-33185043 None:intergenic 30.0%
AAATATGGTCAGACCTAAAT+AGG + chr4.3:33185968-33185987 MS.gene003526:intron 30.0%
AAGCAAGTTTGGAAACTTAT+TGG - chr4.3:33186309-33186328 None:intergenic 30.0%
AATTCAATGTAATCACGTGT+TGG - chr4.3:33184290-33184309 None:intergenic 30.0%
AGCCATAAACAGTGTTAAAA+GGG - chr4.3:33186693-33186712 None:intergenic 30.0%
ATATGCTCCAATGAAATGAA+TGG + chr4.3:33185530-33185549 MS.gene003526:intron 30.0%
ATGGTAACCATTCATTTCAT+TGG - chr4.3:33185540-33185559 None:intergenic 30.0%
ATTAGAGACTATGATTGCTA+TGG + chr4.3:33185168-33185187 MS.gene003526:intron 30.0%
ATTTATGCATGTATCTTCTG+TGG + chr4.3:33186487-33186506 MS.gene003526:intron 30.0%
CATTTGATTCAATTGGAAAC+TGG + chr4.3:33184552-33184571 MS.gene003526:intron 30.0%
GATATCTACTCGAATTAAAG+GGG + chr4.3:33185445-33185464 MS.gene003526:intron 30.0%
GGGACATTTACATCTTTATT+AGG + chr4.3:33186414-33186433 MS.gene003526:intron 30.0%
GGTTACCATATGCTAATAAT+TGG + chr4.3:33185551-33185570 MS.gene003526:intron 30.0%
TACTTGTCAAAACAACATTC+TGG + chr4.3:33186586-33186605 MS.gene003526:CDS 30.0%
TATCTATATAAGCACGGATT+AGG + chr4.3:33184222-33184241 MS.gene003526:intron 30.0%
TCAGACCTAAATAGGTAAAA+TGG + chr4.3:33185976-33185995 MS.gene003526:intron 30.0%
TTAATCTGGTAATCTGCATT+TGG - chr4.3:33186002-33186021 None:intergenic 30.0%
TTAGATAACTCATTACCCAT+TGG + chr4.3:33184480-33184499 MS.gene003526:intron 30.0%
! AAAAACATTTGTTGGGAGTT+GGG + chr4.3:33185666-33185685 MS.gene003526:intron 30.0%
! ATTTAACTGCACATGTTTTG+TGG + chr4.3:33185241-33185260 MS.gene003526:intron 30.0%
! CCGCAATTTTATATTAGTCA+TGG + chr4.3:33185942-33185961 MS.gene003526:intron 30.0%
! CTTTGCTATCAAGTTAAGTA+AGG + chr4.3:33184457-33184476 MS.gene003526:intron 30.0%
! GAAAATGGTTTTTCTGTAGT+CGG - chr4.3:33185789-33185808 None:intergenic 30.0%
!! GAGTTGTTTTGTTAGAGTAA+GGG + chr4.3:33185130-33185149 MS.gene003526:intron 30.0%
!! TGAGTTGTTTTGTTAGAGTA+AGG + chr4.3:33185129-33185148 MS.gene003526:intron 30.0%
!! TTTGGCCATTTTACCTATTT+AGG - chr4.3:33185984-33186003 None:intergenic 30.0%
AACTCTGATGAAGCTTATGT+TGG - chr4.3:33184531-33184550 None:intergenic 35.0%
AACTTTGGACCAAATGGTTA+AGG - chr4.3:33185624-33185643 None:intergenic 35.0%
AATATGGTATCTAAGCCATG+AGG + chr4.3:33186079-33186098 MS.gene003526:intron 35.0%
ACCAGTCAATAATCGAACTT+TGG - chr4.3:33185639-33185658 None:intergenic 35.0%
ACTCTGATGAAGCTTATGTT+GGG - chr4.3:33184530-33184549 None:intergenic 35.0%
ACTTTGGACCAAATGGTTAA+GGG - chr4.3:33185623-33185642 None:intergenic 35.0%
AGGGTTCTACTTCTATCTAT+AGG + chr4.3:33184575-33184594 MS.gene003526:intron 35.0%
ATAGGGCTTCTATGATGATA+TGG + chr4.3:33184593-33184612 MS.gene003526:intron 35.0%
CTGAGAGGAAAGATAATGTA+AGG - chr4.3:33183720-33183739 None:intergenic 35.0%
CTTACATTATCTTTCCTCTC+AGG + chr4.3:33183718-33183737 MS.gene003526:CDS 35.0%
GAGAGTTTGTACCTTGTATA+AGG - chr4.3:33185056-33185075 None:intergenic 35.0%
GAGCCATAAACAGTGTTAAA+AGG - chr4.3:33186694-33186713 None:intergenic 35.0%
GGGTTCTACTTCTATCTATA+GGG + chr4.3:33184576-33184595 MS.gene003526:intron 35.0%
GTACCTCTGAACATAATTCA+AGG - chr4.3:33183822-33183841 None:intergenic 35.0%
GTCTTATGTGATTTGAGTGA+GGG - chr4.3:33186385-33186404 None:intergenic 35.0%
TAATCGAACTTTGGACCAAA+TGG - chr4.3:33185630-33185649 None:intergenic 35.0%
TAGGGCTTCTATGATGATAT+GGG + chr4.3:33184594-33184613 MS.gene003526:intron 35.0%
TCCAAAGTTCGATTATTGAC+TGG + chr4.3:33185635-33185654 MS.gene003526:intron 35.0%
TGATTCAATTGGAAACTGGA+GGG + chr4.3:33184556-33184575 MS.gene003526:intron 35.0%
TGTCTTATGTGATTTGAGTG+AGG - chr4.3:33186386-33186405 None:intergenic 35.0%
TGTTTATGGCTCACTTTGTA+TGG + chr4.3:33186702-33186721 MS.gene003526:CDS 35.0%
TTGATTCAATTGGAAACTGG+AGG + chr4.3:33184555-33184574 MS.gene003526:intron 35.0%
TTGTACCTTGTATAAGGCAA+GGG - chr4.3:33185050-33185069 None:intergenic 35.0%
TTGTCAAAACAACATTCTGG+CGG + chr4.3:33186589-33186608 MS.gene003526:CDS 35.0%
TTTGTACCTTGTATAAGGCA+AGG - chr4.3:33185051-33185070 None:intergenic 35.0%
! GAAAAACATTTGTTGGGAGT+TGG + chr4.3:33185665-33185684 MS.gene003526:intron 35.0%
! TAATATTCCGATGCTGATTG+TGG + chr4.3:33184713-33184732 MS.gene003526:CDS 35.0%
! TACTCGAATTAAAGGGGTAT+TGG + chr4.3:33185451-33185470 MS.gene003526:intron 35.0%
! TCGATTATTGACTGGTGTTA+TGG + chr4.3:33185643-33185662 MS.gene003526:intron 35.0%
! TCTATGATGATATGGGGTTT+TGG + chr4.3:33184601-33184620 MS.gene003526:intron 35.0%
! TGCCCTTTTAACACTGTTTA+TGG + chr4.3:33186688-33186707 MS.gene003526:CDS 35.0%
!! AAAGGGGTATTGGTTGATTT+GGG + chr4.3:33185461-33185480 MS.gene003526:intron 35.0%
!! AATGCAGTTTGTTGACCAAT+GGG - chr4.3:33184498-33184517 None:intergenic 35.0%
!! CCTTGAATTTCCACTTTTGA+GGG - chr4.3:33183944-33183963 None:intergenic 35.0%
!! TAAAGGGGTATTGGTTGATT+TGG + chr4.3:33185460-33185479 MS.gene003526:intron 35.0%
!! TAATGCAGTTTGTTGACCAA+TGG - chr4.3:33184499-33184518 None:intergenic 35.0%
!! TCCTTGAATTTCCACTTTTG+AGG - chr4.3:33183945-33183964 None:intergenic 35.0%
!! TTATTTCTATCAACATGGCG+AGG + chr4.3:33185575-33185594 MS.gene003526:intron 35.0%
!!! GTTTTGTTTACAAGAGGAAG+TGG - chr4.3:33186559-33186578 None:intergenic 35.0%
AATTGCGGAGAAGATACAAC+CGG - chr4.3:33185930-33185949 None:intergenic 40.0%
ACCACAAGGAAAAGCAAGTT+TGG - chr4.3:33186320-33186339 None:intergenic 40.0%
ACGAAGATTGTTTACCTGAG+AGG - chr4.3:33183735-33183754 None:intergenic 40.0%
AGGAAAATCCAAACACCACA+AGG - chr4.3:33186334-33186353 None:intergenic 40.0%
AGGGCTTCTATGATGATATG+GGG + chr4.3:33184595-33184614 MS.gene003526:intron 40.0%
AGTTGAGTCCCTTAACCATT+TGG + chr4.3:33185612-33185631 MS.gene003526:intron 40.0%
ATCCTGGCCATATTGTGTAA+CGG - chr4.3:33183876-33183895 None:intergenic 40.0%
CACAAGCTATAATCTGCGTT+TGG - chr4.3:33186636-33186655 None:intergenic 40.0%
CCCTCAAAAGTGGAAATTCA+AGG + chr4.3:33183941-33183960 MS.gene003526:CDS 40.0%
CTATACAAATCCCGAAAGCT+TGG + chr4.3:33183965-33183984 MS.gene003526:CDS 40.0%
GGTCAACAAACTGCATTACT+AGG + chr4.3:33184501-33184520 MS.gene003526:intron 40.0%
GGTCCTTGAATTATGTTCAG+AGG + chr4.3:33183816-33183835 MS.gene003526:intron 40.0%
GGTTGTCTTGTGGATCTTAA+TGG + chr4.3:33184771-33184790 MS.gene003526:CDS 40.0%
TATGACGTGAGTTTGGTTGA+CGG + chr4.3:33184156-33184175 MS.gene003526:CDS 40.0%
TCACTTTGTATGGACACTTC+AGG + chr4.3:33186712-33186731 MS.gene003526:CDS 40.0%
TGATGTAAGCCCGTGTAATT+TGG - chr4.3:33185885-33185904 None:intergenic 40.0%
TGTACCTTGTATAAGGCAAG+GGG - chr4.3:33185049-33185068 None:intergenic 40.0%
TGTCTTGTGGATCTTAATGG+TGG + chr4.3:33184774-33184793 MS.gene003526:CDS 40.0%
TTGTGTTACCTCTATTGCTG+TGG + chr4.3:33186651-33186670 MS.gene003526:CDS 40.0%
! ACAAGTGCCGTTACACAATA+TGG + chr4.3:33183866-33183885 MS.gene003526:CDS 40.0%
! TTTGAGCAGCCAAAAAGTGT+TGG + chr4.3:33186513-33186532 MS.gene003526:intron 40.0%
!! ATTGGTTGATTTGGGCGATA+GGG + chr4.3:33185469-33185488 MS.gene003526:intron 40.0%
!! GTTTTTCTGTAGTCGGTGTT+CGG - chr4.3:33185782-33185801 None:intergenic 40.0%
!! TATTGGTTGATTTGGGCGAT+AGG + chr4.3:33185468-33185487 MS.gene003526:intron 40.0%
!! TCCAAACTTGCTTTTCCTTG+TGG + chr4.3:33186316-33186335 MS.gene003526:intron 40.0%
!! TGTCTGGTGTCATATACTTG+TGG + chr4.3:33184247-33184266 MS.gene003526:intron 40.0%
!! TTGAGCAGCCAAAAAGTGTT+GGG + chr4.3:33186514-33186533 MS.gene003526:intron 40.0%
!! TTGCTTTTCCTTGTGGTGTT+TGG + chr4.3:33186323-33186342 MS.gene003526:intron 40.0%
!!! ACACTTTTTGGCTGCTCAAA+AGG - chr4.3:33186513-33186532 None:intergenic 40.0%
ACAAATCCCGAAAGCTTGGT+CGG + chr4.3:33183969-33183988 MS.gene003526:CDS 45.0%
AGCTCAAGCCAGTTGTATGA+TGG + chr4.3:33185192-33185211 MS.gene003526:intron 45.0%
ATATGGCCAGGATTACTCTC+CGG + chr4.3:33183883-33183902 MS.gene003526:CDS 45.0%
ATTGCGGAGAAGATACAACC+GGG - chr4.3:33185929-33185948 None:intergenic 45.0%
CCTCACAGGTCCAAATTACA+CGG + chr4.3:33185872-33185891 MS.gene003526:intron 45.0%
CTCACAGGTCCAAATTACAC+GGG + chr4.3:33185873-33185892 MS.gene003526:intron 45.0%
GAAAAACGCCACAGCAATAG+AGG - chr4.3:33186662-33186681 None:intergenic 45.0%
GATTTGGCCCATCATACAAC+TGG - chr4.3:33185203-33185222 None:intergenic 45.0%
GCTCAAGCCAGTTGTATGAT+GGG + chr4.3:33185193-33185212 MS.gene003526:intron 45.0%
GGACTTCTATGACGTGAGTT+TGG + chr4.3:33184149-33184168 MS.gene003526:CDS 45.0%
GGATCTTAATGGTGGTTGTC+CGG + chr4.3:33184782-33184801 MS.gene003526:CDS 45.0%
TCCTCACTACAACAATAGCG+AGG - chr4.3:33184885-33184904 None:intergenic 45.0%
TCCTCGCTATTGTTGTAGTG+AGG + chr4.3:33184881-33184900 MS.gene003526:CDS 45.0%
TGGTTGACGGTAAGTGTGTT+CGG + chr4.3:33184169-33184188 MS.gene003526:intron 45.0%
TTAGCGGAGTTCACCTTGAA+CGG + chr4.3:33184114-33184133 MS.gene003526:CDS 45.0%
TTTGCCCCTTGCCTTATACA+AGG + chr4.3:33185042-33185061 MS.gene003526:CDS 45.0%
! ACTGCACATGTTTTGTGGAC+TGG + chr4.3:33185246-33185265 MS.gene003526:intron 45.0%
! CAGTGTTAAAAGGGCATGAC+AGG - chr4.3:33186684-33186703 None:intergenic 45.0%
! GGAAGCACATGTGTAAGTAC+TGG - chr4.3:33185003-33185022 None:intergenic 45.0%
! GTAATCACGTGTTGGTGTGT+TGG - chr4.3:33184282-33184301 None:intergenic 45.0%
! TCCTTGCTCCCAACACTTTT+TGG - chr4.3:33186525-33186544 None:intergenic 45.0%
!! TCCACTTTTGAGGGTGAATC+CGG - chr4.3:33183935-33183954 None:intergenic 45.0%
!! TGATATGGGGTTTTGGCATC+CGG + chr4.3:33184608-33184627 MS.gene003526:intron 45.0%
!! TTGGTTGATTTGGGCGATAG+GGG + chr4.3:33185470-33185489 MS.gene003526:intron 45.0%
AAGCTTGGTCGGGTCGAATA+TGG + chr4.3:33183980-33183999 MS.gene003526:CDS 50.0%
AATTTGGACCTGTGAGGCTG+TGG - chr4.3:33185869-33185888 None:intergenic 50.0%
ACCGGATTCACCCTCAAAAG+TGG + chr4.3:33183931-33183950 MS.gene003526:CDS 50.0%
AGCTTGGTCGGGTCGAATAT+GGG + chr4.3:33183981-33184000 MS.gene003526:CDS 50.0%
ATAGAAGGACCACACGTGTC+AGG - chr4.3:33184918-33184937 None:intergenic 50.0%
ATATGGGCACGAACTCTCTG+CGG + chr4.3:33183997-33184016 MS.gene003526:CDS 50.0%
ATTCGACCCGACCAAGCTTT+CGG - chr4.3:33183979-33183998 None:intergenic 50.0%
CAAACCTCCGGCAACATTAG+CGG + chr4.3:33184098-33184117 MS.gene003526:CDS 50.0%
CAAATCCCGAAAGCTTGGTC+GGG + chr4.3:33183970-33183989 MS.gene003526:CDS 50.0%
CCGTGTAATTTGGACCTGTG+AGG - chr4.3:33185875-33185894 None:intergenic 50.0%
CCTTTCGCCACAATCAGCAT+CGG - chr4.3:33184723-33184742 None:intergenic 50.0%
GTGAACTCCGCTAATGTTGC+CGG - chr4.3:33184108-33184127 None:intergenic 50.0%
GTGTTGGGAGCAAGGAAAGA+TGG + chr4.3:33186529-33186548 MS.gene003526:CDS 50.0%
TACGCGTAGCTATAAGAGCG+TGG - chr4.3:33184969-33184988 None:intergenic 50.0%
TATTCTACGCCTGACACGTG+TGG + chr4.3:33184906-33184925 MS.gene003526:CDS 50.0%
TCACCTTGAACGGAGCTGAT+GGG + chr4.3:33184124-33184143 MS.gene003526:CDS 50.0%
TCATGTATCACCGCAGACTG+TGG + chr4.3:33184042-33184061 MS.gene003526:CDS 50.0%
TCTGGCGGTTCTTCATCGAA+AGG + chr4.3:33186604-33186623 MS.gene003526:CDS 50.0%
TCTTAATGGTGGTTGTCCGG+TGG + chr4.3:33184785-33184804 MS.gene003526:CDS 50.0%
TGCCGTTACACAATATGGCC+AGG + chr4.3:33183871-33183890 MS.gene003526:CDS 50.0%
TTCACCTTGAACGGAGCTGA+TGG + chr4.3:33184123-33184142 MS.gene003526:CDS 50.0%
TTGCGGAGAAGATACAACCG+GGG - chr4.3:33185928-33185947 None:intergenic 50.0%
TTGGGAGAGGTCTTTGCAAG+AGG + chr4.3:33185684-33185703 MS.gene003526:intron 50.0%
! ACGCGTAGCTATAAGAGCGT+GGG - chr4.3:33184968-33184987 None:intergenic 50.0%
! ACGTGTTGGTGTGTTGGTGT+CGG - chr4.3:33184276-33184295 None:intergenic 50.0%
! ATGCTGATTGTGGCGAAAGG+AGG + chr4.3:33184723-33184742 MS.gene003526:CDS 50.0%
! CATTTGTTGGGAGTTGGGAG+AGG + chr4.3:33185671-33185690 MS.gene003526:intron 50.0%
! TGCTGATTGTGGCGAAAGGA+GGG + chr4.3:33184724-33184743 MS.gene003526:CDS 50.0%
! TGGTTGTCCGGTGGATTTGA+AGG + chr4.3:33184794-33184813 MS.gene003526:CDS 50.0%
! TGTAGTCGGTGTTCGGTCAA+TGG - chr4.3:33185775-33185794 None:intergenic 50.0%
! TTGTCCGGTGGATTTGAAGG+TGG + chr4.3:33184797-33184816 MS.gene003526:CDS 50.0%
! TTTTGTGAATACCCCTCCCC+CGG + chr4.3:33185908-33185927 MS.gene003526:intron 50.0%
!! AAGCACGGATTAGGCATGTC+TGG + chr4.3:33184231-33184250 MS.gene003526:intron 50.0%
!! ACTTTTGAGGGTGAATCCGG+TGG - chr4.3:33183932-33183951 None:intergenic 50.0%
!! GATATGGGGTTTTGGCATCC+GGG + chr4.3:33184609-33184628 MS.gene003526:intron 50.0%
!! GCCAAAAAGTGTTGGGAGCA+AGG + chr4.3:33186521-33186540 MS.gene003526:intron 50.0%
!!! AGGGGACTGGGAGCATTTTT+TGG + chr4.3:33185488-33185507 MS.gene003526:intron 50.0%
AACTCCGCTAATGTTGCCGG+AGG - chr4.3:33184105-33184124 None:intergenic 55.0%
AGAAGATACAACCGGGGGAG+GGG - chr4.3:33185922-33185941 None:intergenic 55.0%
CAACCCATCAGCTCCGTTCA+AGG - chr4.3:33184130-33184149 None:intergenic 55.0%
CACTACGTGGAAGAGCCTCA+TGG - chr4.3:33186097-33186116 None:intergenic 55.0%
CATGAGGCTCTTCCACGTAG+TGG + chr4.3:33186095-33186114 MS.gene003526:intron 55.0%
CGCTAATGTTGCCGGAGGTT+TGG - chr4.3:33184100-33184119 None:intergenic 55.0%
CTCTGCGGTCAAGACTCTGA+GGG + chr4.3:33184012-33184031 MS.gene003526:CDS 55.0%
GAGAAGATACAACCGGGGGA+GGG - chr4.3:33185923-33185942 None:intergenic 55.0%
GATTTGGGCGATAGGGGACT+GGG + chr4.3:33185476-33185495 MS.gene003526:intron 55.0%
TCAACATGGCGAGGCACAAG+TGG + chr4.3:33185584-33185603 MS.gene003526:intron 55.0%
TCTCTGCGGTCAAGACTCTG+AGG + chr4.3:33184011-33184030 MS.gene003526:CDS 55.0%
TGCGGAGAAGATACAACCGG+GGG - chr4.3:33185927-33185946 None:intergenic 55.0%
TGGATTTGAAGGTGGCGCGT+GGG + chr4.3:33184805-33184824 MS.gene003526:CDS 55.0%
TTCGACCCGACCAAGCTTTC+GGG - chr4.3:33183978-33183997 None:intergenic 55.0%
TTGAGGGTGAATCCGGTGGT+GGG - chr4.3:33183928-33183947 None:intergenic 55.0%
TTTGAGGGTGAATCCGGTGG+TGG - chr4.3:33183929-33183948 None:intergenic 55.0%
TTTGGCATCCGGGTCGTGTT+CGG + chr4.3:33184619-33184638 MS.gene003526:intron 55.0%
! AAGCGCGTGTGAGGCTTTTG+GGG + chr4.3:33184857-33184876 MS.gene003526:CDS 55.0%
! CAGCGCTACTGGTTGTCTTG+TGG + chr4.3:33184761-33184780 MS.gene003526:CDS 55.0%
! CCAGAGACTAGTCCACTACG+TGG - chr4.3:33186110-33186129 None:intergenic 55.0%
! CCGATGCTGATTGTGGCGAA+AGG + chr4.3:33184720-33184739 MS.gene003526:CDS 55.0%
! CTTGAACGGAGCTGATGGGT+TGG + chr4.3:33184128-33184147 MS.gene003526:CDS 55.0%
! GAAGCGCGTGTGAGGCTTTT+GGG + chr4.3:33184856-33184875 MS.gene003526:CDS 55.0%
! TGATTTGGGCGATAGGGGAC+TGG + chr4.3:33185475-33185494 MS.gene003526:intron 55.0%
!! AGAAGCGCGTGTGAGGCTTT+TGG + chr4.3:33184855-33184874 MS.gene003526:CDS 55.0%
!! CCACGTAGTGGACTAGTCTC+TGG + chr4.3:33186107-33186126 MS.gene003526:intron 55.0%
ATCACCGCAGACTGTGGCTC+CGG + chr4.3:33184048-33184067 MS.gene003526:CDS 60.0%
CGCGCCACCTTCAAATCCAC+CGG - chr4.3:33184804-33184823 None:intergenic 60.0%
GACACTGACCGAACACGACC+CGG - chr4.3:33184630-33184649 None:intergenic 60.0%
GGAGAAGATACAACCGGGGG+AGG - chr4.3:33185924-33185943 None:intergenic 60.0%
GTGGATTTGAAGGTGGCGCG+TGG + chr4.3:33184804-33184823 MS.gene003526:CDS 60.0%
TGAAGGTGGCGCGTGGGAAT+GGG + chr4.3:33184811-33184830 MS.gene003526:CDS 60.0%
TTGAAGGTGGCGCGTGGGAA+TGG + chr4.3:33184810-33184829 MS.gene003526:CDS 60.0%
TTTGCCGGAGCCACAGTCTG+CGG - chr4.3:33184055-33184074 None:intergenic 60.0%
! TGCGTGTAGAAGCGCGTGTG+AGG + chr4.3:33184848-33184867 MS.gene003526:CDS 60.0%
!! GTGAATCCGGTGGTGGGTAG+CGG - chr4.3:33183922-33183941 None:intergenic 60.0%
AGAGGTGGCTGCAGCGCTAC+TGG + chr4.3:33184750-33184769 MS.gene003526:CDS 65.0%
ATCCCCAGCCACAGCCTCAC+AGG + chr4.3:33185858-33185877 MS.gene003526:intron 65.0%
CGGAGGTTTGGCACCACCAC+CGG - chr4.3:33184088-33184107 None:intergenic 65.0%
CGTGGGAATGGGAGTGGCAG+TGG + chr4.3:33184822-33184841 MS.gene003526:CDS 65.0%
GACCTGTGAGGCTGTGGCTG+GGG - chr4.3:33185863-33185882 None:intergenic 65.0%
GCGAAAGGAGGGACGAGAGG+TGG + chr4.3:33184735-33184754 MS.gene003526:CDS 65.0%
GGACCTGTGAGGCTGTGGCT+GGG - chr4.3:33185864-33185883 None:intergenic 65.0%
GTGGCGAAAGGAGGGACGAG+AGG + chr4.3:33184732-33184751 MS.gene003526:CDS 65.0%
TCCGGCAAAGTAGCCTGCGC+CGG + chr4.3:33184066-33184085 MS.gene003526:CDS 65.0%
TGGACCTGTGAGGCTGTGGC+TGG - chr4.3:33185865-33185884 None:intergenic 65.0%
! AAAGTAGCCTGCGCCGGTGG+TGG + chr4.3:33184072-33184091 MS.gene003526:CDS 65.0%
! ACCGGCGCAGGCTACTTTGC+CGG - chr4.3:33184070-33184089 None:intergenic 65.0%
! CGGTGGTGGTGCCAAACCTC+CGG + chr4.3:33184086-33184105 MS.gene003526:CDS 65.0%
! GTGGCGCCGGAGAGTAATCC+TGG - chr4.3:33183892-33183911 None:intergenic 65.0%
!! AATCCGGTGGTGGGTAGCGG+CGG - chr4.3:33183919-33183938 None:intergenic 65.0%
GGCAAAGTAGCCTGCGCCGG+TGG + chr4.3:33184069-33184088 MS.gene003526:CDS 70.0%
GTGGCGCGTGGGAATGGGAG+TGG + chr4.3:33184816-33184835 MS.gene003526:CDS 70.0%
TAGCGGCGGTGAAGTGGCGC+CGG - chr4.3:33183905-33183924 None:intergenic 70.0%
TCACCGCCGCTACCCACCAC+CGG + chr4.3:33183913-33183932 MS.gene003526:CDS 70.0%
TTTGGCACCACCACCGGCGC+AGG - chr4.3:33184082-33184101 None:intergenic 70.0%
! GGTGGGTAGCGGCGGTGAAG+TGG - chr4.3:33183911-33183930 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 33183679 33186744 33183679 ID=MS.gene003526
chr4.3 mRNA 33183679 33186744 33183679 ID=MS.gene003526.t1;Parent=MS.gene003526
chr4.3 exon 33183679 33183739 33183679 ID=MS.gene003526.t1.exon1;Parent=MS.gene003526.t1
chr4.3 CDS 33183679 33183739 33183679 ID=cds.MS.gene003526.t1;Parent=MS.gene003526.t1
chr4.3 exon 33183836 33184177 33183836 ID=MS.gene003526.t1.exon2;Parent=MS.gene003526.t1
chr4.3 CDS 33183836 33184177 33183836 ID=cds.MS.gene003526.t1;Parent=MS.gene003526.t1
chr4.3 exon 33184709 33185063 33184709 ID=MS.gene003526.t1.exon3;Parent=MS.gene003526.t1
chr4.3 CDS 33184709 33185063 33184709 ID=cds.MS.gene003526.t1;Parent=MS.gene003526.t1
chr4.3 exon 33186522 33186744 33186522 ID=MS.gene003526.t1.exon4;Parent=MS.gene003526.t1
chr4.3 CDS 33186522 33186744 33186522 ID=cds.MS.gene003526.t1;Parent=MS.gene003526.t1
Gene Sequence

>MS.gene003526

ATGGGTCGATTTCTTCTCTTTCTCATTTTTCTCAGCTTCCTTACATTATCTTTCCTCTCAGGTAAACAATCTTCGTAAACTCTCAATTTTCAAAAATTGCACTTTAGTCTCTAAATTTTAACTTCACTTTGCTATTTGGTCCTTGAATTATGTTCAGAGGTACAAACAACGTCATTCAAGATTGTAAACAAGTGCCGTTACACAATATGGCCAGGATTACTCTCCGGCGCCACTTCACCGCCGCTACCCACCACCGGATTCACCCTCAAAAGTGGAAATTCAAGGACTATACAAATCCCGAAAGCTTGGTCGGGTCGAATATGGGCACGAACTCTCTGCGGTCAAGACTCTGAGGGAAAGTTTTCATGTATCACCGCAGACTGTGGCTCCGGCAAAGTAGCCTGCGCCGGTGGTGGTGCCAAACCTCCGGCAACATTAGCGGAGTTCACCTTGAACGGAGCTGATGGGTTGGACTTCTATGACGTGAGTTTGGTTGACGGTAAGTGTGTTCGGTGTCTAACACATGTCAGTATCATTGAATTGTATCTATATAAGCACGGATTAGGCATGTCTGGTGTCATATACTTGTGGTGTCCGACACCAACACACCAACACGTGATTACATTGAATTATTTTATTTTCTCAAAATATTGTTATTATTGGTATAAAGGTTTCACCTTTCTTCAAATTTGATGAAATAGTCAAGTTATTGTTCATTAGCTATATAATCATCTTTCTTTGAGTATTACTTACACTAGTCAAATGAACTATAGCAAGACTTTGCTATCAAGTTAAGTAAGGTTAGATAACTCATTACCCATTGGTCAACAAACTGCATTACTAGGATTCCCAACATAAGCTTCATCAGAGTTACATTTGATTCAATTGGAAACTGGAGGGTTCTACTTCTATCTATAGGGCTTCTATGATGATATGGGGTTTTGGCATCCGGGTCGTGTTCGGTCAGTGTCTAAGTATGTTTTTATATAATTATTATATTGTTGTCCTAAAATTTCTTTGTGCTTGATAGGTTATAATATTCCGATGCTGATTGTGGCGAAAGGAGGGACGAGAGGTGGCTGCAGCGCTACTGGTTGTCTTGTGGATCTTAATGGTGGTTGTCCGGTGGATTTGAAGGTGGCGCGTGGGAATGGGAGTGGCAGTGGCGTTGCGTGTAGAAGCGCGTGTGAGGCTTTTGGGGATCCTCGCTATTGTTGTAGTGAGGAGTATTCTACGCCTGACACGTGTGGTCCTTCTATTTACTCGCTGTTTTTTAAACATGCTTGCCCACGCTCTTATAGCTACGCGTATGATGATAAGACCAGTACTTACACATGTGCTTCCGCTAACTATTTGATCGTGTTTTGCCCCTTGCCTTATACAAGGTACAAACTCTCTTGACTCTTTCATCATTAGCTTCATAACCATTTTTTTAGCTTTTGATTATGCATGAGTTGTTTTGTTAGAGTAAGGGCACCTATGTATTTTAATTAGAGACTATGATTGCTATGGAAGCTCAAGCCAGTTGTATGATGGGCCAAATCCACTTTTGTTTAATGTTTATTTAACTGCACATGTTTTGTGGACTGGAATTAAGAGTTGAGATATTCTTCATTTCACAGAAAACTCAAAAGAAATAGAGTTTCATTATAACATAGTTTTATGTTTATAAAGTCATATAAATATTTAATGTATGTCACATATTTTCAAAATGTATTTCTATATGAATATGAATATATCTATAGTGATAGGAAAAAAACGGAGAAGATATCTACTCGAATTAAAGGGGTATTGGTTGATTTGGGCGATAGGGGACTGGGAGCATTTTTTGGTGTTACTACTATTGTGTATATATGCTCCAATGAAATGAATGGTTACCATATGCTAATAATTGGATTATTTCTATCAACATGGCGAGGCACAAGTGGTAGATAGTTGAGTCCCTTAACCATTTGGTCCAAAGTTCGATTATTGACTGGTGTTATGGAAAAACATTTGTTGGGAGTTGGGAGAGGTCTTTGCAAGAGGATGCCTTTGATTTAGCAACAAAAAAGAGTCAGATAACGTAGGAAAAGAAGATTAGTTTTGTACGACCATTGACCGAACACCGACTACAGAAAAACCATTTTCTACCTTGAATTATGAAAAATAGTTGATTATTTGCATTCTAAGCAATGAAATCCCCAGCCACAGCCTCACAGGTCCAAATTACACGGGCTTACATCATACTTTTGTGAATACCCCTCCCCCGGTTGTATCTTCTCCGCAATTTTATATTAGTCATGGGAAAAATATGGTCAGACCTAAATAGGTAAAATGGCCAAATGCAGATTACCAGATTAATATGCCTATATTTTAATGTTATGTTAGGGATCCCACATTGAATAAATAAAAGTGTTTAATATGGTATCTAAGCCATGAGGCTCTTCCACGTAGTGGACTAGTCTCTGGAGCTGTTAGTAGCCTCTTTCTCAAATTCAATTTTATTGTCTAATCTCTCAAACATAAAAAATAAATATGAAATAAACTTGAAATATTTATTCATGTTCTGCACACGTATCCACATATATAAAATATGCTTAAAAAATATGCATGCCTTAAATCGTCTTTTATATGTGAGCTTTCTTCCAATAAGTTTCCAAACTTGCTTTTCCTTGTGGTGTTTGGATTTTCCTTGTTGTTTTTTCTTGTAATGGCAAACATCCCTCACTCAAATCACATAAGACAATTTTTTGGGGACATTTACATCTTTATTAGGTGAATATTTTGTGTACTTATTTTGAGTAGTTATTATAATTTATAGCATTAATTTATGCATGTATCTTCTGTGGCCTTTTGAGCAGCCAAAAAGTGTTGGGAGCAAGGAAAGATGGAGCACCACTTCCTCTTGTAAACAAAACTATGATGTACTTGTCAAAACAACATTCTGGCGGTTCTTCATCGAAAGGTCTGATCCAAACGCAGATTATAGCTTGTGTTACCTCTATTGCTGTGGCGTTTTTCCTGTCATGCCCTTTTAACACTGTTTATGGCTCACTTTGTATGGACACTTCAGGCAGAAAGTAA
Protein sequence

>MS.gene003526.t1

MGRFLLFLIFLSFLTLSFLSEVQTTSFKIVNKCRYTIWPGLLSGATSPPLPTTGFTLKSGNSRTIQIPKAWSGRIWARTLCGQDSEGKFSCITADCGSGKVACAGGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNIPMLIVAKGGTRGGCSATGCLVDLNGGCPVDLKVARGNGSGSGVACRSACEAFGDPRYCCSEEYSTPDTCGPSIYSLFFKHACPRSYSYAYDDKTSTYTCASANYLIVFCPLPYTSQKVLGARKDGAPLPLVNKTMMYLSKQHSGGSSSKGLIQTQIIACVTSIAVAFFLSCPFNTVYGSLCMDTSGRK