AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene92395

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92395.t1 MTR_8g037890 88.925 307 26 1 1 299 1 307 0.0 551
MS.gene92395.t1 MTR_8g056820 86.561 253 34 0 1 253 1 253 1.13e-162 452
MS.gene92395.t1 MTR_5g022310 75.329 304 56 5 1 299 1 290 3.12e-159 446
MS.gene92395.t1 MTR_5g022310 83.465 254 38 2 1 250 1 254 8.42e-153 427
MS.gene92395.t1 MTR_8g075550 64.901 302 80 5 1 293 1 285 2.63e-129 370
MS.gene92395.t1 MTR_1g025420 61.818 275 101 3 14 285 11 284 2.12e-117 340
MS.gene92395.t1 MTR_1g025420 67.220 241 75 3 14 251 11 250 2.11e-114 331
MS.gene92395.t1 MTR_3g114030 68.220 236 71 3 20 252 1 235 7.64e-113 326
MS.gene92395.t1 MTR_4g073730 61.240 258 91 3 11 260 5 261 1.69e-111 324
MS.gene92395.t1 MTR_4g073730 61.240 258 91 3 11 260 5 261 5.80e-111 324
MS.gene92395.t1 MTR_4g073720 56.818 264 98 6 9 270 9 258 1.97e-91 275
MS.gene92395.t1 MTR_5g022350 52.941 272 117 5 11 280 14 276 1.23e-89 270
MS.gene92395.t1 MTR_8g075510 54.839 248 101 6 4 250 10 247 1.68e-84 254
MS.gene92395.t1 MTR_2g068030 52.941 221 100 3 28 246 25 243 9.02e-83 250
MS.gene92395.t1 MTR_8g075510 53.008 266 112 7 4 268 10 263 4.69e-82 250
MS.gene92395.t1 MTR_2g067980 54.274 234 101 3 24 253 22 253 5.29e-82 267
MS.gene92395.t1 MTR_2g069660 54.545 231 101 3 19 247 15 243 1.53e-81 246
MS.gene92395.t1 MTR_7g102380 49.796 245 117 5 7 249 3 243 7.74e-81 244
MS.gene92395.t1 MTR_8g036215 51.046 239 112 4 9 246 3 237 1.20e-80 244
MS.gene92395.t1 MTR_1g021945 54.148 229 99 4 25 251 25 249 1.31e-78 239
MS.gene92395.t1 MTR_3g111620 53.275 229 101 5 25 251 26 250 2.27e-77 236
MS.gene92395.t1 MTR_2g068655 49.785 233 115 2 22 253 27 258 3.94e-77 238
MS.gene92395.t1 MTR_1g062660 51.464 239 109 5 13 249 11 244 1.34e-76 234
MS.gene92395.t1 MTR_1g062590 48.583 247 119 5 3 247 2 242 2.66e-76 233
MS.gene92395.t1 MTR_6g079580 50.204 245 109 5 11 247 1 240 5.69e-76 232
MS.gene92395.t1 MTR_1g062340 50.209 239 112 5 13 249 11 244 7.07e-76 232
MS.gene92395.t1 MTR_1g062350 50.403 248 115 6 4 249 3 244 2.14e-75 231
MS.gene92395.t1 MTR_1g062370 49.597 248 117 6 4 249 3 244 5.00e-75 230
MS.gene92395.t1 MTR_8g107140 49.012 253 121 5 1 250 1 248 7.45e-75 229
MS.gene92395.t1 MTR_1g062630 49.597 248 117 6 3 248 2 243 5.67e-72 223
MS.gene92395.t1 MTR_5g023850 46.875 256 97 4 1 252 1 221 3.18e-71 219
MS.gene92395.t1 MTR_5g059200 45.076 264 130 7 1 260 1 253 5.33e-70 218
MS.gene92395.t1 MTR_7g062610 45.492 244 129 3 5 247 2 242 8.49e-69 214
MS.gene92395.t1 MTR_3g068015 48.000 225 112 4 25 247 27 248 3.24e-68 213
MS.gene92395.t1 MTR_1g062690 45.565 248 103 7 4 249 3 220 9.08e-62 195
MS.gene92395.t1 MTR_2g067990 44.922 256 111 9 19 271 20 248 6.27e-60 206
MS.gene92395.t1 MTR_6g009480 40.239 251 146 4 1 248 4 253 9.50e-60 192
MS.gene92395.t1 MTR_4g063630 42.739 241 126 8 13 246 16 251 3.47e-59 190
MS.gene92395.t1 MTR_5g010640 40.392 255 125 9 1 247 1 236 3.93e-50 166
MS.gene92395.t1 MTR_2g067970 45.894 207 106 6 69 271 3 207 3.62e-49 175
MS.gene92395.t1 MTR_5g010635 40.969 227 110 9 23 247 21 225 9.35e-45 152
MS.gene92395.t1 MTR_8g096900 40.586 239 116 9 11 247 34 248 1.35e-44 152
MS.gene92395.t1 MTR_5g022350 52.518 139 60 3 14 150 82 216 3.70e-39 137
MS.gene92395.t1 MTR_2g063150 34.742 213 130 5 26 236 34 239 5.10e-38 135
MS.gene92395.t1 MTR_8g089020 50.000 130 60 2 110 239 32 156 3.47e-37 130
MS.gene92395.t1 MTR_1g062390 31.890 254 152 8 1 248 1 239 7.58e-33 121
MS.gene92395.t1 MTR_7g076360 35.849 212 72 4 25 236 7 154 6.46e-32 117
MS.gene92395.t1 MTR_8g096910 44.604 139 61 6 9 141 1 129 1.11e-28 108
MS.gene92395.t1 MTR_8g096920 41.606 137 69 5 9 143 1 128 8.19e-24 95.9
MS.gene92395.t1 MTR_3g081550 47.368 95 47 2 111 203 16 109 1.19e-18 80.1
MS.gene92395.t1 MTR_1g062640 38.889 90 52 2 79 168 60 146 2.51e-13 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene92395.t1 AT4G36010 69.620 237 66 3 22 252 19 255 1.28e-117 340
MS.gene92395.t1 AT4G36010 69.620 237 66 3 22 252 19 255 1.28e-117 340
MS.gene92395.t1 AT2G17860 63.855 249 85 3 7 250 4 252 5.29e-112 324
MS.gene92395.t1 AT1G75800 59.770 261 96 5 9 263 5 262 2.61e-107 315
MS.gene92395.t1 AT4G38670 60.956 251 93 4 6 252 3 252 4.46e-106 310
MS.gene92395.t1 AT4G38670 60.956 251 93 4 6 252 3 252 4.46e-106 310
MS.gene92395.t1 AT4G38670 65.652 230 74 4 27 252 8 236 3.13e-105 308
MS.gene92395.t1 AT1G20030 63.983 236 79 3 22 252 16 250 1.24e-104 308
MS.gene92395.t1 AT1G20030 64.378 233 77 3 25 252 2 233 1.57e-104 307
MS.gene92395.t1 AT4G38660 56.506 269 111 3 7 275 11 273 1.03e-98 294
MS.gene92395.t1 AT4G24180 56.923 260 101 5 6 258 7 262 5.48e-97 288
MS.gene92395.t1 AT4G24180 58.400 250 93 5 6 248 7 252 7.77e-97 286
MS.gene92395.t1 AT4G38660 57.812 256 102 3 20 275 2 251 1.17e-96 288
MS.gene92395.t1 AT4G24180 58.537 246 90 5 11 248 16 257 1.41e-96 285
MS.gene92395.t1 AT4G24180 57.031 256 98 5 11 258 16 267 1.59e-96 287
MS.gene92395.t1 AT5G24620 50.763 262 121 4 9 263 7 267 9.00e-86 263
MS.gene92395.t1 AT4G24180 56.410 234 91 5 6 232 7 236 1.63e-85 259
MS.gene92395.t1 AT5G24620 49.814 269 127 4 1 263 56 322 2.55e-85 264
MS.gene92395.t1 AT5G24620 49.814 269 127 4 1 263 77 343 3.14e-85 264
MS.gene92395.t1 AT4G24180 56.522 230 88 5 11 232 16 241 3.17e-85 259
MS.gene92395.t1 AT5G38280 49.004 251 124 2 11 257 10 260 8.94e-84 265
MS.gene92395.t1 AT5G38280 49.004 251 124 2 11 257 10 260 1.02e-83 265
MS.gene92395.t1 AT1G75030 52.191 251 109 7 6 250 1 246 5.92e-83 250
MS.gene92395.t1 AT1G19320 51.394 251 112 5 1 246 1 246 3.06e-82 248
MS.gene92395.t1 AT1G75050 52.632 247 109 6 7 250 5 246 3.36e-81 246
MS.gene92395.t1 AT1G75040 53.942 241 105 4 7 247 5 239 5.54e-81 245
MS.gene92395.t1 AT1G18250 51.982 227 102 4 23 247 19 240 6.27e-77 235
MS.gene92395.t1 AT1G73620 52.444 225 100 4 25 247 41 260 9.07e-77 235
MS.gene92395.t1 AT1G18250 52.000 225 101 4 25 247 20 239 9.28e-77 234
MS.gene92395.t1 AT1G77700 48.221 253 117 6 12 260 43 285 2.90e-76 236
MS.gene92395.t1 AT1G77700 49.587 242 108 6 12 249 43 274 1.22e-75 234
MS.gene92395.t1 AT1G77700 52.232 224 97 5 25 248 88 301 4.34e-75 234
MS.gene92395.t1 AT5G02140 42.857 252 138 3 7 257 5 251 2.66e-66 209
MS.gene92395.t1 AT5G02140 44.215 242 129 3 7 247 5 241 6.30e-66 207
MS.gene92395.t1 AT4G36000 65.161 155 46 2 102 256 1 147 1.10e-65 205
MS.gene92395.t1 AT4G36000 65.161 155 46 2 102 256 1 147 1.10e-65 205
MS.gene92395.t1 AT4G18253 43.725 247 128 4 9 252 5 243 1.74e-64 203
MS.gene92395.t1 AT2G28790 44.628 242 125 7 10 246 11 248 1.14e-61 196
MS.gene92395.t1 AT2G28790 44.628 242 125 7 10 246 36 273 1.39e-61 197
MS.gene92395.t1 AT4G18250 41.606 274 150 6 5 276 35 300 8.51e-60 202
MS.gene92395.t1 AT1G70250 40.138 289 149 10 25 299 144 422 2.10e-59 202
MS.gene92395.t1 AT5G40020 42.128 235 131 4 23 255 25 256 2.57e-59 190
MS.gene92395.t1 AT4G11650 39.483 271 137 9 1 271 1 244 3.29e-53 174
MS.gene92395.t1 AT5G24620 54.676 139 58 1 133 266 15 153 3.98e-45 155
MS.gene92395.t1 AT2G24810 59.740 77 31 0 170 246 116 192 1.57e-27 106

Find 97 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAGGTATTGGAAGAGAATT+AGG 0.170473 8.4:-60356925 None:intergenic
CCAAGTGGTCAGGCCGTCTA+TGG 0.217701 8.4:+60357095 MS.gene92395:CDS
CCAACAAGTTCGATCGATTC+CGG 0.259312 8.4:+60357673 MS.gene92395:CDS
CCTGAGGAGATGGATATATA+TGG 0.299759 8.4:+60357715 MS.gene92395:CDS
ACCTCAAGTTCGACCCAATC+TGG 0.309245 8.4:+60357637 MS.gene92395:CDS
GAACTTGGCTTGCATGTATC+TGG 0.329096 8.4:-60357493 None:intergenic
GGAAAATTCTCCTGTGTTAC+CGG 0.333338 8.4:+60357148 MS.gene92395:CDS
AAAGCGCATGTGAAGCGTTT+GGG 0.344124 8.4:+60357434 MS.gene92395:CDS
CCATGTGGTTCTATCGTCAT+TGG 0.348717 8.4:-60357304 None:intergenic
ATTCTCTTCCAATACCTAAC+TGG 0.364848 8.4:+60356929 MS.gene92395:CDS
CAACAAGTTCGATCGATTCC+GGG 0.377626 8.4:+60357674 MS.gene92395:CDS
AACTCAATCAACCATCGCTT+TGG 0.382050 8.4:+60356898 MS.gene92395:CDS
TGTAGAGAACGGTGTTGTTC+CGG 0.383816 8.4:-60357023 None:intergenic
CCGGCGCCGGATAAAATTCC+AGG 0.384166 8.4:-60357004 None:intergenic
CATATGAACCAGTTAGGTAT+TGG 0.386121 8.4:-60356937 None:intergenic
GAGATTTCTCGTTCCCAGAT+TGG 0.387686 8.4:-60357651 None:intergenic
CAATGGAGATTTCTCGTTCC+CGG 0.398071 8.4:-60357692 None:intergenic
CCGGAATCGATCGAACTTGT+TGG 0.416174 8.4:-60357673 None:intergenic
TTAGCCGAGTTTACACTTAA+CGG 0.420790 8.4:+60357229 MS.gene92395:CDS
CTCATCACTTTCAACTCGGT+TGG 0.422630 8.4:-60357388 None:intergenic
AGATTTCTCGTTCCCAGATT+GGG 0.426200 8.4:-60357650 None:intergenic
AGCAGCAATCATAACATTGT+TGG 0.429720 8.4:-60357758 None:intergenic
GGGAGGTACGGCAAGGGCAT+TGG 0.430183 8.4:-60357074 None:intergenic
GCCGTACCTCCCAAGTGGTC+AGG 0.435086 8.4:+60357085 MS.gene92395:CDS
TGTCATGCAGTTTCCGCCTC+CGG 0.443562 8.4:-60357332 None:intergenic
GGCAAGGGCATTGGATTCGC+CGG 0.444861 8.4:-60357065 None:intergenic
CAAGTGGTCAGGCCGTCTAT+GGG 0.446135 8.4:+60357096 MS.gene92395:CDS
CCATAGACGGCCTGACCACT+TGG 0.446964 8.4:-60357095 None:intergenic
TTGTTGCATATGAACCAGTT+AGG 0.449950 8.4:-60356943 None:intergenic
GCCGGGTTGGAGAGCAAAGC+CGG 0.453151 8.4:-60357047 None:intergenic
CTGAGGAGATGGATATATAT+GGG 0.457856 8.4:+60357716 MS.gene92395:CDS
ACAACACCGTTCTCTACAAC+CGG 0.459009 8.4:+60357028 MS.gene92395:CDS
ATCTCCATTGCCTGAGGAGA+TGG 0.461012 8.4:+60357705 MS.gene92395:CDS
TGCAACTACACCGTTTGGCC+TGG 0.463035 8.4:+60356986 MS.gene92395:CDS
GTTTCCTCCAGCACACTCTA+TGG 0.465520 8.4:-60357188 None:intergenic
ACGAGTGCAACTACACCGTT+TGG 0.467155 8.4:+60356981 MS.gene92395:CDS
ATAGAACCACATGGAGCAAC+CGG 0.467179 8.4:+60357313 MS.gene92395:CDS
TAGGTATTGGAAGAGAATTA+GGG 0.467250 8.4:-60356924 None:intergenic
GGCGGAAACTGCATGACAAC+AGG 0.472230 8.4:+60357337 MS.gene92395:CDS
TATAGCTACGCTTATGATGA+TGG 0.472777 8.4:+60357553 MS.gene92395:CDS
GCCTGACCACTTGGGAGGTA+CGG 0.475859 8.4:-60357086 None:intergenic
AAAAGCGCATGTGAAGCGTT+TGG 0.476727 8.4:+60357433 MS.gene92395:CDS
TCCTCCACCATAGAGTGTGC+TGG 0.480343 8.4:+60357181 MS.gene92395:CDS
CCCAGATTGGGTCGAACTTG+AGG 0.481684 8.4:-60357638 None:intergenic
CCACATGGAGCAACCGGAGG+CGG 0.490132 8.4:+60357319 MS.gene92395:CDS
TTTACACTTAACGGTGCAAA+CGG 0.497247 8.4:+60357238 MS.gene92395:CDS
CATGTGGTTCTATCGTCATT+GGG 0.500356 8.4:-60357303 None:intergenic
GAACGGTGTTGTTCCGGCGC+CGG 0.511342 8.4:-60357017 None:intergenic
GAACTTGAGGTCGAACTTGA+GGG 0.522077 8.4:-60357625 None:intergenic
GCAAGGGCATTGGATTCGCC+GGG 0.523677 8.4:-60357064 None:intergenic
GGATAAAATTCCAGGCCAAA+CGG 0.531186 8.4:-60356996 None:intergenic
CCATATATATCCATCTCCTC+AGG 0.534013 8.4:-60357715 None:intergenic
ATATCCATCTCCTCAGGCAA+TGG 0.536781 8.4:-60357709 None:intergenic
GGGCATTGGATTCGCCGGGT+TGG 0.537166 8.4:-60357060 None:intergenic
TTTCTTCGACGTTAGTCTCG+TGG 0.547119 8.4:+60357267 MS.gene92395:CDS
CCTCAAGTTCGACCCAATCT+GGG 0.550513 8.4:+60357638 MS.gene92395:CDS
GATCCGCAATATTGTTGTAG+TGG 0.551927 8.4:+60357457 MS.gene92395:CDS
CGAACTTGAGGTCGAACTTG+AGG 0.552011 8.4:-60357626 None:intergenic
CCGCCTCCGGTTGCTCCATG+TGG 0.564023 8.4:-60357319 None:intergenic
ACCACTTGGGAGGTACGGCA+AGG 0.566696 8.4:-60357081 None:intergenic
TCCAGCACACTCTATGGTGG+AGG 0.567323 8.4:-60357182 None:intergenic
CTCTGCTCTCAAGATTCCAC+CGG 0.569324 8.4:+60357127 MS.gene92395:CDS
AAGCGCATGTGAAGCGTTTG+GGG 0.569335 8.4:+60357435 MS.gene92395:CDS
GTAAACTCGGCTAATGTAGC+CGG 0.573023 8.4:-60357220 None:intergenic
CTGCATGACAACAGGTTGCA+TGG 0.576620 8.4:+60357345 MS.gene92395:CDS
GGTGGAGGAAGCACAGTCAC+CGG 0.577174 8.4:-60357167 None:intergenic
TGCACCGTTAAGTGTAAACT+CGG 0.588205 8.4:-60357233 None:intergenic
ATTACTCATCACTTTCAACT+CGG 0.591426 8.4:-60357392 None:intergenic
CATAGACGGCCTGACCACTT+GGG 0.591730 8.4:-60357094 None:intergenic
AGAGGGTACGACCCCATAGA+CGG 0.601389 8.4:-60357108 None:intergenic
TGAGGAGATGGATATATATG+GGG 0.605444 8.4:+60357717 MS.gene92395:CDS
CGGTGGAATCTTGAGAGCAG+AGG 0.605968 8.4:-60357126 None:intergenic
AGCACAGTCACCGGTAACAC+AGG 0.609119 8.4:-60357158 None:intergenic
GCAAAGCCGGTTGTAGAGAA+CGG 0.610915 8.4:-60357034 None:intergenic
TCCTCCAGCACACTCTATGG+TGG 0.611738 8.4:-60357185 None:intergenic
ACCGGCTTTGCTCTCCAACC+CGG 0.615393 8.4:+60357046 MS.gene92395:CDS
GAGTTGAAAGTGATGAGTAA+TGG 0.615914 8.4:+60357394 MS.gene92395:CDS
TGGAGGAAACGCTCAACCAC+CGG 0.617523 8.4:+60357201 MS.gene92395:CDS
TTCGACGTTAGTCTCGTGGA+CGG 0.621410 8.4:+60357271 MS.gene92395:CDS
GGTGGAATCTTGAGAGCAGA+GGG 0.624367 8.4:-60357125 None:intergenic
AATTAGGGTAACCAAAGCGA+TGG 0.636779 8.4:-60356909 None:intergenic
AACTCGGCTAATGTAGCCGG+TGG 0.641121 8.4:-60357217 None:intergenic
AGACGGCCTGACCACTTGGG+AGG 0.643248 8.4:-60357091 None:intergenic
AAGTGGTCAGGCCGTCTATG+GGG 0.643584 8.4:+60357097 MS.gene92395:CDS
TCCACCATAGAGTGTGCTGG+AGG 0.646324 8.4:+60357184 MS.gene92395:CDS
CCACTTGGGAGGTACGGCAA+GGG 0.646374 8.4:-60357080 None:intergenic
GTGGTTCTATCGTCATTGGG+AGG 0.650114 8.4:-60357300 None:intergenic
CCCTTGCCGTACCTCCCAAG+TGG 0.650312 8.4:+60357080 MS.gene92395:CDS
CGAGAAATCTCCATTGCCTG+AGG 0.654237 8.4:+60357699 MS.gene92395:CDS
TTGAAAGTGATGAGTAATGG+CGG 0.675133 8.4:+60357397 MS.gene92395:CDS
GAGGAGATGGATATATATGG+GGG 0.683840 8.4:+60357718 MS.gene92395:CDS
GAACCACATGGAGCAACCGG+AGG 0.692391 8.4:+60357316 MS.gene92395:CDS
TAAGCGTAGCTATAAGCGCG+AGG 0.692743 8.4:-60357544 None:intergenic
AAAGTGATGAGTAATGGCGG+AGG 0.693219 8.4:+60357400 MS.gene92395:CDS
GCGCCACTACAACAATATTG+CGG 0.704004 8.4:-60357460 None:intergenic
CCAATGACGATAGAACCACA+TGG 0.737275 8.4:+60357304 MS.gene92395:CDS
CATGACAACAGGTTGCATGG+TGG 0.757398 8.4:+60357348 MS.gene92395:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATACATTAATTATGTA+AGG - chr8.4:60358268-60358287 None:intergenic 10.0%
!! TAAATTTATCTTAATTAGTT+TGG - chr8.4:60360326-60360345 None:intergenic 10.0%
!!! ACACAATAATTATTTTTTTT+AGG - chr8.4:60358291-60358310 None:intergenic 10.0%
!!! ATTTAACATTATTTTTGTTT+TGG - chr8.4:60359343-60359362 None:intergenic 10.0%
!! AAAATACATATACATAAATG+TGG + chr8.4:60359413-60359432 MS.gene92395:intron 15.0%
!! AAATACATATACATAAATGT+GGG + chr8.4:60359414-60359433 MS.gene92395:intron 15.0%
!! ATTAATAGAACAAATTTGAT+TGG + chr8.4:60360776-60360795 MS.gene92395:intron 15.0%
!! ATTAATTTAATCACATGATT+AGG - chr8.4:60360762-60360781 None:intergenic 15.0%
!!! ATTGTGTATTTCTTTTTTTA+AGG + chr8.4:60358304-60358323 MS.gene92395:intron 15.0%
!!! ATTTATGTATATGTATTTTG+TGG - chr8.4:60359412-60359431 None:intergenic 15.0%
!!! GGATTAATAATTTTAGTAAA+GGG - chr8.4:60360529-60360548 None:intergenic 15.0%
!!! TTTGTTCATTTTTTTGATAA+GGG - chr8.4:60359537-60359556 None:intergenic 15.0%
!!! TTTTGTTCATTTTTTTGATA+AGG - chr8.4:60359538-60359557 None:intergenic 15.0%
!! AATACATATACATAAATGTG+GGG + chr8.4:60359415-60359434 MS.gene92395:intron 20.0%
!! ACTAAAATTATTAATCCGTT+TGG + chr8.4:60360532-60360551 MS.gene92395:intron 20.0%
!! AGAAAAACCATTAAATTAGT+TGG + chr8.4:60358387-60358406 MS.gene92395:intron 20.0%
!! ATGTAAAAAAGTTGAATGAT+TGG + chr8.4:60360637-60360656 MS.gene92395:intron 20.0%
!! ATTACAATCTGAATTTGAAA+CGG + chr8.4:60359812-60359831 MS.gene92395:intron 20.0%
!! GAAAAACCATTAAATTAGTT+GGG + chr8.4:60358388-60358407 MS.gene92395:intron 20.0%
!! GTACGTTCAAATATAATAAT+CGG + chr8.4:60357923-60357942 MS.gene92395:intron 20.0%
!! TAATAAACTAGAACATAACA+AGG + chr8.4:60360820-60360839 MS.gene92395:intron 20.0%
!! TAATTAGTTATTACATCTCT+AGG + chr8.4:60359046-60359065 MS.gene92395:intron 20.0%
!! TTAATTAGAACTAGACATAA+AGG - chr8.4:60360480-60360499 None:intergenic 20.0%
!! TTATTTGGTAAAGTGAAATT+AGG - chr8.4:60358515-60358534 None:intergenic 20.0%
!!! AACTAATTGATTTTTTTGCA+TGG - chr8.4:60359007-60359026 None:intergenic 20.0%
!!! AATAATTTTAGTAAAGGGAT+TGG - chr8.4:60360524-60360543 None:intergenic 20.0%
!!! AATGAAATTTTTTTGCCTTT+TGG + chr8.4:60359449-60359468 MS.gene92395:intron 20.0%
!!! ATCAAACAAAGTGTTAATTT+AGG - chr8.4:60360583-60360602 None:intergenic 20.0%
!!! ATGAAATTTTTTTGCCTTTT+GGG + chr8.4:60359450-60359469 MS.gene92395:intron 20.0%
!!! ATTGGTGATTGAATAAAAAT+AGG - chr8.4:60360506-60360525 None:intergenic 20.0%
!!! CGGATTAATAATTTTAGTAA+AGG - chr8.4:60360530-60360549 None:intergenic 20.0%
!!! TTATGTTTTTTCTTCTTTCT+CGG - chr8.4:60358477-60358496 None:intergenic 20.0%
!!! TTTAGTGTTGTTTTTGATTA+TGG - chr8.4:60360896-60360915 None:intergenic 20.0%
!!! TTTTGCATATGATCATAATT+AGG + chr8.4:60359782-60359801 MS.gene92395:intron 20.0%
!!! TTTTTTTTATAAACGATGCA+TGG - chr8.4:60358421-60358440 None:intergenic 20.0%
! AAGAAATAACCTTAAAAGGA+AGG + chr8.4:60360945-60360964 MS.gene92395:intron 25.0%
! AATGAGAAAAGAAACTGAAA+AGG + chr8.4:60360194-60360213 MS.gene92395:intron 25.0%
! AGAATTAATTCAAGAGCTTT+GGG - chr8.4:60361010-60361029 None:intergenic 25.0%
! ATAAAAAGTAATGACGAAGA+AGG + chr8.4:60360386-60360405 MS.gene92395:intron 25.0%
! ATACATATACATAAATGTGG+GGG + chr8.4:60359416-60359435 MS.gene92395:intron 25.0%
! ATGATCAAGGTTATCAAAAT+CGG + chr8.4:60359167-60359186 MS.gene92395:intron 25.0%
! ATGTATAGAATGAAGATTGA+AGG + chr8.4:60359877-60359896 MS.gene92395:intron 25.0%
! GAAATTGAAGATTCAAATCT+TGG - chr8.4:60360983-60361002 None:intergenic 25.0%
! GAGTAAGAAATAACCTTAAA+AGG + chr8.4:60360941-60360960 MS.gene92395:intron 25.0%
! TTATTATTTAGACGAATAGC+TGG + chr8.4:60360343-60360362 MS.gene92395:intron 25.0%
!! AAGAATTTTCCTTCCTTTTA+AGG - chr8.4:60360957-60360976 None:intergenic 25.0%
!!! ATAGGATTTTGCTTGTTTTT+GGG + chr8.4:60359620-60359639 MS.gene92395:intron 25.0%
!!! ATTTAGCAGAATTTTTTGGA+TGG - chr8.4:60358131-60358150 None:intergenic 25.0%
!!! CTTCGTCATTACTTTTTATT+TGG - chr8.4:60360385-60360404 None:intergenic 25.0%
!!! GAGAATTTAGCAGAATTTTT+TGG - chr8.4:60358135-60358154 None:intergenic 25.0%
!!! GTTGATATGTTTGTTTTGAT+AGG - chr8.4:60359854-60359873 None:intergenic 25.0%
!!! TCTAGTCTTAATTGTTCTAT+AGG + chr8.4:60360693-60360712 MS.gene92395:intron 25.0%
AAAAGATTATCGTATCCACA+GGG + chr8.4:60360285-60360304 MS.gene92395:intron 30.0%
AACTGATTGTTAACATGCAA+AGG + chr8.4:60360726-60360745 MS.gene92395:intron 30.0%
AGATGTAAATCAATAGAGAG+AGG + chr8.4:60360420-60360439 MS.gene92395:intron 30.0%
ATAACCTTGATCATAAGACA+TGG - chr8.4:60359161-60359180 None:intergenic 30.0%
ATTACTCATCACTTTCAACT+CGG - chr8.4:60357395-60357414 None:intergenic 30.0%
ATTATATTAAAAGCCCAACG+TGG + chr8.4:60358035-60358054 MS.gene92395:intron 30.0%
CAGAATTAATTCAAGAGCTT+TGG - chr8.4:60361011-60361030 None:intergenic 30.0%
CATGTTAACAATCAGTTGAT+TGG - chr8.4:60360723-60360742 None:intergenic 30.0%
CTGTTCTATAAATACCCAAA+AGG - chr8.4:60359467-60359486 None:intergenic 30.0%
GAAAATCGAAACTGAAAAAG+CGG + chr8.4:60358754-60358773 MS.gene92395:intron 30.0%
GAATTAATTCAAGAGCTTTG+GGG - chr8.4:60361009-60361028 None:intergenic 30.0%
GTAGCAAAGTTCACAAATTA+AGG + chr8.4:60359084-60359103 MS.gene92395:intron 30.0%
TAAAAGATTATCGTATCCAC+AGG + chr8.4:60360284-60360303 MS.gene92395:intron 30.0%
TAAAATCGCAATCAAAATCG+AGG + chr8.4:60359311-60359330 MS.gene92395:intron 30.0%
TACATATACATAAATGTGGG+GGG + chr8.4:60359417-60359436 MS.gene92395:intron 30.0%
TGATCAAGGTTATCAAAATC+GGG + chr8.4:60359168-60359187 MS.gene92395:intron 30.0%
TGGTTATTCAAGATGAAAAG+TGG - chr8.4:60358987-60359006 None:intergenic 30.0%
TTAAATCACGAATGACCAAA+CGG - chr8.4:60360550-60360569 None:intergenic 30.0%
TTCACAAATTAAGGCTTTCT+AGG + chr8.4:60359093-60359112 MS.gene92395:intron 30.0%
TTCGTGACTTTCAAAAAACT+AGG + chr8.4:60357857-60357876 MS.gene92395:intron 30.0%
TTGGACAACATCTAAATCAT+TGG - chr8.4:60360119-60360138 None:intergenic 30.0%
TTTCAAAAAACTAGGTACGT+GGG + chr8.4:60357865-60357884 MS.gene92395:intron 30.0%
TTTCTGTAATTGAAGACGAA+AGG - chr8.4:60358559-60358578 None:intergenic 30.0%
TTTGGATGGAATAGATCAAT+GGG - chr8.4:60358117-60358136 None:intergenic 30.0%
! AAATCGAAGGATTTTACTCA+AGG + chr8.4:60359247-60359266 MS.gene92395:intron 30.0%
! GACTTTTGTAGAATCGATAT+AGG + chr8.4:60359269-60359288 MS.gene92395:intron 30.0%
! TCATCTTTGTTTGTTGCATT+GGG - chr8.4:60360078-60360097 None:intergenic 30.0%
! TTTTATAAACGATGCATGGT+GGG - chr8.4:60358417-60358436 None:intergenic 30.0%
! TTTTCTTCTTTCTCGGTAAT+AGG - chr8.4:60358470-60358489 None:intergenic 30.0%
! TTTTGGATGGAATAGATCAA+TGG - chr8.4:60358118-60358137 None:intergenic 30.0%
! TTTTTATAAACGATGCATGG+TGG - chr8.4:60358418-60358437 None:intergenic 30.0%
!! CTTTTGGGTATTTATAGAAC+AGG + chr8.4:60359465-60359484 MS.gene92395:intron 30.0%
!! GATAGGATTTTGCTTGTTTT+TGG + chr8.4:60359619-60359638 MS.gene92395:intron 30.0%
!! TAGGTATTGGAAGAGAATTA+GGG - chr8.4:60356927-60356946 None:intergenic 30.0%
!! TTAGGTATTGGAAGAGAATT+AGG - chr8.4:60356928-60356947 None:intergenic 30.0%
!! TTGTGTTTTTGTGGTGAATT+TGG + chr8.4:60358947-60358966 MS.gene92395:intron 30.0%
!!! TGGTTTTGATTGTGTTTTTG+TGG + chr8.4:60358938-60358957 MS.gene92395:intron 30.0%
!!! TTGTTTTGATCATAGTCACA+CGG + chr8.4:60357791-60357810 MS.gene92395:intron 30.0%
!!! TTGTTTTTGGGATTTTGCTA+TGG + chr8.4:60359632-60359651 MS.gene92395:intron 30.0%
AAAAACTGCGAGTATGAACT+TGG - chr8.4:60357511-60357530 None:intergenic 35.0%
AAATCAATAGAGAGAGGTCT+AGG + chr8.4:60360426-60360445 MS.gene92395:intron 35.0%
AACACCATGTCTTATGATCA+AGG + chr8.4:60359154-60359173 MS.gene92395:intron 35.0%
AAGATGAAAAATGACGAGCA+AGG + chr8.4:60360025-60360044 MS.gene92395:intron 35.0%
AATCAATAGAGAGAGGTCTA+GGG + chr8.4:60360427-60360446 MS.gene92395:intron 35.0%
AGCAGCAATCATAACATTGT+TGG - chr8.4:60357761-60357780 None:intergenic 35.0%
ATTCGCAGAAATAAACGTAC+CGG - chr8.4:60358818-60358837 None:intergenic 35.0%
ATTCTCTTCCAATACCTAAC+TGG + chr8.4:60356929-60356948 MS.gene92395:CDS 35.0%
CATATGAACCAGTTAGGTAT+TGG - chr8.4:60356940-60356959 None:intergenic 35.0%
CTGAGGAGATGGATATATAT+GGG + chr8.4:60357716-60357735 MS.gene92395:CDS 35.0%
CTTTCAAAAAACTAGGTACG+TGG + chr8.4:60357864-60357883 MS.gene92395:intron 35.0%
GAAATCGCAATCAAAATCGA+AGG + chr8.4:60359234-60359253 MS.gene92395:intron 35.0%
GAATAGCTGGTAGAATGTTT+CGG + chr8.4:60360356-60360375 MS.gene92395:intron 35.0%
GACTTTACTTCAAGTCGAAA+GGG + chr8.4:60359190-60359209 MS.gene92395:intron 35.0%
GAGTTGAAAGTGATGAGTAA+TGG + chr8.4:60357394-60357413 MS.gene92395:CDS 35.0%
GATGAAGATGGATGTATTTC+TGG - chr8.4:60358575-60358594 None:intergenic 35.0%
GGGTATCCCAACTAATTTAA+TGG - chr8.4:60358397-60358416 None:intergenic 35.0%
GGTATTTATAGAACAGGTCA+GGG + chr8.4:60359471-60359490 MS.gene92395:intron 35.0%
GTGAAGAAGAAGAAGAAGAA+AGG - chr8.4:60358606-60358625 None:intergenic 35.0%
GTTAACAATCAGTTGATTGG+TGG - chr8.4:60360720-60360739 None:intergenic 35.0%
TACTTGTCAATTAATCCCTG+TGG - chr8.4:60360303-60360322 None:intergenic 35.0%
TATAGCTACGCTTATGATGA+TGG + chr8.4:60357553-60357572 MS.gene92395:CDS 35.0%
TCGATATAGGATAGCAAAGT+CGG + chr8.4:60359282-60359301 MS.gene92395:intron 35.0%
TGAAATCCATTCAAAATCGC+AGG - chr8.4:60359572-60359591 None:intergenic 35.0%
TGAGGAGATGGATATATATG+GGG + chr8.4:60357717-60357736 MS.gene92395:CDS 35.0%
TTAGCCGAGTTTACACTTAA+CGG + chr8.4:60357229-60357248 MS.gene92395:CDS 35.0%
TTCAAAAAACTAGGTACGTG+GGG + chr8.4:60357866-60357885 MS.gene92395:intron 35.0%
TTGAAAGTGATGAGTAATGG+CGG + chr8.4:60357397-60357416 MS.gene92395:CDS 35.0%
TTGTTGCATATGAACCAGTT+AGG - chr8.4:60356946-60356965 None:intergenic 35.0%
TTTACACTTAACGGTGCAAA+CGG + chr8.4:60357238-60357257 MS.gene92395:CDS 35.0%
! AACTCACAAAGAGTACGAAA+CGG + chr8.4:60359906-60359925 MS.gene92395:intron 35.0%
! ACAATCTGAATTTGAAACGG+CGG + chr8.4:60359815-60359834 MS.gene92395:intron 35.0%
! ATAAGGGTCAATTTTTGACC+CGG - chr8.4:60359521-60359540 None:intergenic 35.0%
! CAAAATCCTGCGATTTTGAA+TGG + chr8.4:60359563-60359582 MS.gene92395:intron 35.0%
! CTCATCTTTGTTTGTTGCAT+TGG - chr8.4:60360079-60360098 None:intergenic 35.0%
! TCAAAATCGCAGGATTTTGA+TGG - chr8.4:60359562-60359581 None:intergenic 35.0%
! TTTTTCGTCCATTGAAGCAT+TGG - chr8.4:60360138-60360157 None:intergenic 35.0%
!! AAATTAGTCTCTAGGGTCTT+GGG - chr8.4:60360867-60360886 None:intergenic 35.0%
!! TTTCTGGAATTGAAGACGAA+AGG - chr8.4:60358650-60358669 None:intergenic 35.0%
!!! ATATTCTTTTTTGCTCGTCG+TGG - chr8.4:60359969-60359988 None:intergenic 35.0%
AACAGGTCAGGGATTCAAAT+CGG + chr8.4:60359482-60359501 MS.gene92395:intron 40.0%
AACTCAATCAACCATCGCTT+TGG + chr8.4:60356898-60356917 MS.gene92395:CDS 40.0%
AATCGGGTCAATTTACGAAC+CGG + chr8.4:60359499-60359518 MS.gene92395:intron 40.0%
AATTAGGGTAACCAAAGCGA+TGG - chr8.4:60356912-60356931 None:intergenic 40.0%
ACTTGAGGGACAAAAAGTGA+TGG - chr8.4:60357614-60357633 None:intergenic 40.0%
AGATTTCTCGTTCCCAGATT+GGG - chr8.4:60357653-60357672 None:intergenic 40.0%
CCAGTGAAGAAGAAGAAGAA+AGG - chr8.4:60358698-60358717 None:intergenic 40.0%
CCATATATATCCATCTCCTC+AGG - chr8.4:60357718-60357737 None:intergenic 40.0%
CCTGAGGAGATGGATATATA+TGG + chr8.4:60357715-60357734 MS.gene92395:CDS 40.0%
CCTTTCTTCTTCTTCTTCAC+TGG + chr8.4:60358695-60358714 MS.gene92395:intron 40.0%
CGATATAGGATAGCAAAGTC+GGG + chr8.4:60359283-60359302 MS.gene92395:intron 40.0%
GAGGAGATGGATATATATGG+GGG + chr8.4:60357718-60357737 MS.gene92395:CDS 40.0%
GATCCGCAATATTGTTGTAG+TGG + chr8.4:60357457-60357476 MS.gene92395:CDS 40.0%
GATGTTGTCCAATGCTTCAA+TGG + chr8.4:60360127-60360146 MS.gene92395:intron 40.0%
GGAAAATTCTCCTGTGTTAC+CGG + chr8.4:60357148-60357167 MS.gene92395:CDS 40.0%
GGACTTTACTTCAAGTCGAA+AGG + chr8.4:60359189-60359208 MS.gene92395:intron 40.0%
GGATAAAATTCCAGGCCAAA+CGG - chr8.4:60356999-60357018 None:intergenic 40.0%
GGGTATTTATAGAACAGGTC+AGG + chr8.4:60359470-60359489 MS.gene92395:intron 40.0%
TCAAAAAACTAGGTACGTGG+GGG + chr8.4:60357867-60357886 MS.gene92395:intron 40.0%
TCGAAAGGGACTTGCAAAAT+CGG + chr8.4:60359204-60359223 MS.gene92395:intron 40.0%
TGCACCGTTAAGTGTAAACT+CGG - chr8.4:60357236-60357255 None:intergenic 40.0%
TTGTACGAATTTCGACGAAC+CGG + chr8.4:60358840-60358859 MS.gene92395:intron 40.0%
! AAGGAGTGTGTTGATGAAGA+TGG - chr8.4:60358587-60358606 None:intergenic 40.0%
! AGTCGCAAAAACCAGGATTT+TGG + chr8.4:60359679-60359698 MS.gene92395:intron 40.0%
! CAATGGGTGTGTGTTTCTAT+TGG - chr8.4:60358101-60358120 None:intergenic 40.0%
! CATGTGGTTCTATCGTCATT+GGG - chr8.4:60357306-60357325 None:intergenic 40.0%
! CGATTTTGTGCGACTTTGAT+AGG + chr8.4:60359602-60359621 MS.gene92395:intron 40.0%
! CTCTAGGAACAGAATTATGC+AGG + chr8.4:60359062-60359081 MS.gene92395:intron 40.0%
! GAAATCCCGACATCTTTTCA+CGG + chr8.4:60358776-60358795 MS.gene92395:intron 40.0%
! GGTAACACAGGAGAATTTTC+CGG - chr8.4:60357149-60357168 None:intergenic 40.0%
! GTCGCAAAAACCAGGATTTT+GGG + chr8.4:60359680-60359699 MS.gene92395:intron 40.0%
! GTTTGGCCTGGAATTTTATC+CGG + chr8.4:60356998-60357017 MS.gene92395:CDS 40.0%
!! CACTGATTTGCAGAAAACGA+CGG + chr8.4:60360001-60360020 MS.gene92395:intron 40.0%
!!! TTTTTTGCTCGTCGTGGTTT+TGG - chr8.4:60359963-60359982 None:intergenic 40.0%
AAAGTGATGAGTAATGGCGG+AGG + chr8.4:60357400-60357419 MS.gene92395:CDS 45.0%
AATTCGTACCACGTACCGAA+GGG - chr8.4:60357826-60357845 None:intergenic 45.0%
ACAACACCGTTCTCTACAAC+CGG + chr8.4:60357028-60357047 MS.gene92395:CDS 45.0%
ACAGAGTCGGTACGCTATTT+GGG + chr8.4:60357894-60357913 MS.gene92395:intron 45.0%
ACAGGTCAGGGATTCAAATC+GGG + chr8.4:60359483-60359502 MS.gene92395:intron 45.0%
AGAGAGAGAGGCTCGTTATT+TGG - chr8.4:60358530-60358549 None:intergenic 45.0%
AGGAACCGTGAAAAGATGTC+GGG - chr8.4:60358784-60358803 None:intergenic 45.0%
ATAGAACCACATGGAGCAAC+CGG + chr8.4:60357313-60357332 MS.gene92395:CDS 45.0%
ATATCCATCTCCTCAGGCAA+TGG - chr8.4:60357712-60357731 None:intergenic 45.0%
ATCGGGTCAATTTACGAACC+GGG + chr8.4:60359500-60359519 MS.gene92395:intron 45.0%
CAAAAAACTAGGTACGTGGG+GGG + chr8.4:60357868-60357887 MS.gene92395:intron 45.0%
CAATGGAGATTTCTCGTTCC+CGG - chr8.4:60357695-60357714 None:intergenic 45.0%
CCAATGACGATAGAACCACA+TGG + chr8.4:60357304-60357323 MS.gene92395:CDS 45.0%
CGAAAGGGACTTGCAAAATC+GGG + chr8.4:60359205-60359224 MS.gene92395:intron 45.0%
CGACTTAAGTCCCAAAATCC+TGG - chr8.4:60359693-60359712 None:intergenic 45.0%
CTCATCACTTTCAACTCGGT+TGG - chr8.4:60357391-60357410 None:intergenic 45.0%
GAAAGGTTAGAGAGAGAGAG+AGG - chr8.4:60358542-60358561 None:intergenic 45.0%
GAACTTGAGGTCGAACTTGA+GGG - chr8.4:60357628-60357647 None:intergenic 45.0%
GAGATTTCTCGTTCCCAGAT+TGG - chr8.4:60357654-60357673 None:intergenic 45.0%
GAGGAACCGTGAAAAGATGT+CGG - chr8.4:60358785-60358804 None:intergenic 45.0%
GCGCCACTACAACAATATTG+CGG - chr8.4:60357463-60357482 None:intergenic 45.0%
GGTGGCGAATTATGTGACTA+TGG + chr8.4:60358918-60358937 MS.gene92395:intron 45.0%
GTAAACTCGGCTAATGTAGC+CGG - chr8.4:60357223-60357242 None:intergenic 45.0%
TACAGAGTCGGTACGCTATT+TGG + chr8.4:60357893-60357912 MS.gene92395:intron 45.0%
TACGAAACGGACGAAAACAG+CGG + chr8.4:60359919-60359938 MS.gene92395:intron 45.0%
TACGCAAAGTCGCAAAAACC+AGG + chr8.4:60359672-60359691 MS.gene92395:intron 45.0%
TGCTGTGATTGAACCACGTT+GGG - chr8.4:60358051-60358070 None:intergenic 45.0%
TTCGGTACGTGGTACGAATT+CGG + chr8.4:60357826-60357845 MS.gene92395:intron 45.0%
! AAAAGCGCATGTGAAGCGTT+TGG + chr8.4:60357433-60357452 MS.gene92395:CDS 45.0%
! AAAGCGCATGTGAAGCGTTT+GGG + chr8.4:60357434-60357453 MS.gene92395:CDS 45.0%
! AACACAGGAGAATTTTCCGG+TGG - chr8.4:60357146-60357165 None:intergenic 45.0%
! AGGAGTGTGTGTGATGAAGA+TGG - chr8.4:60358678-60358697 None:intergenic 45.0%
! CAACAAGTTCGATCGATTCC+GGG + chr8.4:60357674-60357693 MS.gene92395:CDS 45.0%
! CCAACAAGTTCGATCGATTC+CGG + chr8.4:60357673-60357692 MS.gene92395:CDS 45.0%
! CCATGTGGTTCTATCGTCAT+TGG - chr8.4:60357307-60357326 None:intergenic 45.0%
! TCTTTTCACGGTTCCTCTTC+TGG + chr8.4:60358788-60358807 MS.gene92395:intron 45.0%
! TTTCTTCGACGTTAGTCTCG+TGG + chr8.4:60357267-60357286 MS.gene92395:CDS 45.0%
!! CGTCGTTTTCTGCAAATCAG+TGG - chr8.4:60360003-60360022 None:intergenic 45.0%
!! GAACTTGGCTTGCATGTATC+TGG - chr8.4:60357496-60357515 None:intergenic 45.0%
!! TGTAGAGAACGGTGTTGTTC+CGG - chr8.4:60357026-60357045 None:intergenic 45.0%
ACCTCAAGTTCGACCCAATC+TGG + chr8.4:60357637-60357656 MS.gene92395:CDS 50.0%
ACGAGTGCAACTACACCGTT+TGG + chr8.4:60356981-60357000 MS.gene92395:CDS 50.0%
ATCTCCATTGCCTGAGGAGA+TGG + chr8.4:60357705-60357724 MS.gene92395:CDS 50.0%
CAATTCGCGGTTCTCCTCTA+GGG + chr8.4:60358897-60358916 MS.gene92395:intron 50.0%
CACATAATTCGCCACCCTAG+AGG - chr8.4:60358914-60358933 None:intergenic 50.0%
CATGACAACAGGTTGCATGG+TGG + chr8.4:60357348-60357367 MS.gene92395:CDS 50.0%
CCGGAATCGATCGAACTTGT+TGG - chr8.4:60357676-60357695 None:intergenic 50.0%
CCTCAAGTTCGACCCAATCT+GGG + chr8.4:60357638-60357657 MS.gene92395:CDS 50.0%
CGAACTTGAGGTCGAACTTG+AGG - chr8.4:60357629-60357648 None:intergenic 50.0%
CGAGAAATCTCCATTGCCTG+AGG + chr8.4:60357699-60357718 MS.gene92395:CDS 50.0%
CTCTGCTCTCAAGATTCCAC+CGG + chr8.4:60357127-60357146 MS.gene92395:CDS 50.0%
CTGCATGACAACAGGTTGCA+TGG + chr8.4:60357345-60357364 MS.gene92395:CDS 50.0%
GAATTCGTACCACGTACCGA+AGG - chr8.4:60357827-60357846 None:intergenic 50.0%
GCAAAGCCGGTTGTAGAGAA+CGG - chr8.4:60357037-60357056 None:intergenic 50.0%
GGTGGAATCTTGAGAGCAGA+GGG - chr8.4:60357128-60357147 None:intergenic 50.0%
GTGCTGTGATTGAACCACGT+TGG - chr8.4:60358052-60358071 None:intergenic 50.0%
GTTTCCTCCAGCACACTCTA+TGG - chr8.4:60357191-60357210 None:intergenic 50.0%
TAAGCGTAGCTATAAGCGCG+AGG - chr8.4:60357547-60357566 None:intergenic 50.0%
TCGGTACGTGGTACGAATTC+GGG + chr8.4:60357827-60357846 MS.gene92395:intron 50.0%
! AAGCGCATGTGAAGCGTTTG+GGG + chr8.4:60357435-60357454 MS.gene92395:CDS 50.0%
! CGGTACGCTATTTGGGTTCA+TGG + chr8.4:60357901-60357920 MS.gene92395:intron 50.0%
! GTGGTTCTATCGTCATTGGG+AGG - chr8.4:60357303-60357322 None:intergenic 50.0%
! TTCGACGTTAGTCTCGTGGA+CGG + chr8.4:60357271-60357290 MS.gene92395:CDS 50.0%
! TTCGCGGTACTTTTGCGAAC+CGG - chr8.4:60358862-60358881 None:intergenic 50.0%
!! TTCGCAAAAGTACCGCGAAC+CGG + chr8.4:60358863-60358882 MS.gene92395:intron 50.0%
AACTCGGCTAATGTAGCCGG+TGG - chr8.4:60357220-60357239 None:intergenic 55.0%
AAGTGGTCAGGCCGTCTATG+GGG + chr8.4:60357097-60357116 MS.gene92395:CDS 55.0%
ACACGGTTCGCCATTCCCTT+CGG + chr8.4:60357808-60357827 MS.gene92395:intron 55.0%
AGCACAGTCACCGGTAACAC+AGG - chr8.4:60357161-60357180 None:intergenic 55.0%
CAAGTGGTCAGGCCGTCTAT+GGG + chr8.4:60357096-60357115 MS.gene92395:CDS 55.0%
CATAGACGGCCTGACCACTT+GGG - chr8.4:60357097-60357116 None:intergenic 55.0%
CCAATTCGCGGTTCTCCTCT+AGG + chr8.4:60358896-60358915 MS.gene92395:intron 55.0%
CCCAGATTGGGTCGAACTTG+AGG - chr8.4:60357641-60357660 None:intergenic 55.0%
CCTAGAGGAGAACCGCGAAT+TGG - chr8.4:60358899-60358918 None:intergenic 55.0%
CGGTGGAATCTTGAGAGCAG+AGG - chr8.4:60357129-60357148 None:intergenic 55.0%
GGCGGAAACTGCATGACAAC+AGG + chr8.4:60357337-60357356 MS.gene92395:CDS 55.0%
GTACCACGTACCGAAGGGAA+TGG - chr8.4:60357821-60357840 None:intergenic 55.0%
GTGGTACGAATTCGGGTACG+CGG + chr8.4:60357834-60357853 MS.gene92395:intron 55.0%
TCCACCATAGAGTGTGCTGG+AGG + chr8.4:60357184-60357203 MS.gene92395:CDS 55.0%
TCCAGCACACTCTATGGTGG+AGG - chr8.4:60357185-60357204 None:intergenic 55.0%
TCCTCCACCATAGAGTGTGC+TGG + chr8.4:60357181-60357200 MS.gene92395:CDS 55.0%
TCCTCCAGCACACTCTATGG+TGG - chr8.4:60357188-60357207 None:intergenic 55.0%
TGCAACTACACCGTTTGGCC+TGG + chr8.4:60356986-60357005 MS.gene92395:CDS 55.0%
TGGAGGAAACGCTCAACCAC+CGG + chr8.4:60357201-60357220 MS.gene92395:CDS 55.0%
TGTCATGCAGTTTCCGCCTC+CGG - chr8.4:60357335-60357354 None:intergenic 55.0%
! ACGTACCGGTGAACCAGAAG+AGG - chr8.4:60358804-60358823 None:intergenic 55.0%
! ACGTGGGGGGTATACAGAGT+CGG + chr8.4:60357881-60357900 MS.gene92395:intron 55.0%
! AGAGGGTACGACCCCATAGA+CGG - chr8.4:60357111-60357130 None:intergenic 55.0%
! CCTGGAATTTTATCCGGCGC+CGG + chr8.4:60357004-60357023 MS.gene92395:CDS 55.0%
! TAGAGAGAGGTCTAGGGTCG+CGG + chr8.4:60360433-60360452 MS.gene92395:intron 55.0%
!! CGGTTCCTCTTCTGGTTCAC+CGG + chr8.4:60358796-60358815 MS.gene92395:intron 55.0%
CCAAGTGGTCAGGCCGTCTA+TGG + chr8.4:60357095-60357114 MS.gene92395:CDS 60.0%
CCATAGACGGCCTGACCACT+TGG - chr8.4:60357098-60357117 None:intergenic 60.0%
GAACCACATGGAGCAACCGG+AGG + chr8.4:60357316-60357335 MS.gene92395:CDS 60.0%
GCCTGACCACTTGGGAGGTA+CGG - chr8.4:60357089-60357108 None:intergenic 60.0%
GGTTCGCGCGAACCAATTCG+CGG + chr8.4:60358884-60358903 MS.gene92395:intron 60.0%
TCGCCATTCCCTTCGGTACG+TGG + chr8.4:60357815-60357834 MS.gene92395:intron 60.0%
! ACCACTTGGGAGGTACGGCA+AGG - chr8.4:60357084-60357103 None:intergenic 60.0%
! ACCGGCTTTGCTCTCCAACC+CGG + chr8.4:60357046-60357065 MS.gene92395:CDS 60.0%
! CCACTTGGGAGGTACGGCAA+GGG - chr8.4:60357083-60357102 None:intergenic 60.0%
! CCGGCGCCGGATAAAATTCC+AGG - chr8.4:60357007-60357026 None:intergenic 60.0%
! GGTGGAGGAAGCACAGTCAC+CGG - chr8.4:60357170-60357189 None:intergenic 60.0%
! TTCGCGGTTCTCCTCTAGGG+TGG + chr8.4:60358900-60358919 MS.gene92395:intron 60.0%
!! GCAAGGGCATTGGATTCGCC+GGG - chr8.4:60357067-60357086 None:intergenic 60.0%
!! GCGAATTGGTTCGCGCGAAC+CGG - chr8.4:60358885-60358904 None:intergenic 60.0%
!! GGCAAGGGCATTGGATTCGC+CGG - chr8.4:60357068-60357087 None:intergenic 60.0%
AGACGGCCTGACCACTTGGG+AGG - chr8.4:60357094-60357113 None:intergenic 65.0%
CCACATGGAGCAACCGGAGG+CGG + chr8.4:60357319-60357338 MS.gene92395:CDS 65.0%
CCCTTGCCGTACCTCCCAAG+TGG + chr8.4:60357080-60357099 MS.gene92395:CDS 65.0%
GCCGTACCTCCCAAGTGGTC+AGG + chr8.4:60357085-60357104 MS.gene92395:CDS 65.0%
! GCCGGGTTGGAGAGCAAAGC+CGG - chr8.4:60357050-60357069 None:intergenic 65.0%
! GGGAGGTACGGCAAGGGCAT+TGG - chr8.4:60357077-60357096 None:intergenic 65.0%
!! GAACGGTGTTGTTCCGGCGC+CGG - chr8.4:60357020-60357039 None:intergenic 65.0%
!! GGGCATTGGATTCGCCGGGT+TGG - chr8.4:60357063-60357082 None:intergenic 65.0%
CCGCCTCCGGTTGCTCCATG+TGG - chr8.4:60357322-60357341 None:intergenic 70.0%
!! GGTTCGCGCGAACCGGTTCG+CGG - chr8.4:60358878-60358897 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 60356887 60361070 60356887 ID=MS.gene92395
chr8.4 mRNA 60356887 60361070 60356887 ID=MS.gene92395.t1;Parent=MS.gene92395
chr8.4 exon 60356887 60357765 60356887 ID=MS.gene92395.t1.exon1;Parent=MS.gene92395.t1
chr8.4 CDS 60356887 60357765 60356887 ID=cds.MS.gene92395.t1;Parent=MS.gene92395.t1
chr8.4 exon 60361050 60361070 60361050 ID=MS.gene92395.t1.exon2;Parent=MS.gene92395.t1
chr8.4 CDS 60361050 60361070 60361050 ID=cds.MS.gene92395.t1;Parent=MS.gene92395.t1
Gene Sequence

>MS.gene92395

ATGGCTGCTTCAACTCAATCAACCATCGCTTTGGTTACCCTAATTCTCTTCCAATACCTAACTGGTTCATATGCAACAACATTCACAATTGTTAACGAGTGCAACTACACCGTTTGGCCTGGAATTTTATCCGGCGCCGGAACAACACCGTTCTCTACAACCGGCTTTGCTCTCCAACCCGGCGAATCCAATGCCCTTGCCGTACCTCCCAAGTGGTCAGGCCGTCTATGGGGTCGTACCCTCTGCTCTCAAGATTCCACCGGAAAATTCTCCTGTGTTACCGGTGACTGTGCTTCCTCCACCATAGAGTGTGCTGGAGGAAACGCTCAACCACCGGCTACATTAGCCGAGTTTACACTTAACGGTGCAAACGGACTAGATTTCTTCGACGTTAGTCTCGTGGACGGTTACAACCTCCCAATGACGATAGAACCACATGGAGCAACCGGAGGCGGAAACTGCATGACAACAGGTTGCATGGTGGATTTGAACGCTGCGTGTCCAACCGAGTTGAAAGTGATGAGTAATGGCGGAGGTGTAGTGTGTAAAAGCGCATGTGAAGCGTTTGGGGATCCGCAATATTGTTGTAGTGGCGCTTACGCTTCTCCAGATACATGCAAGCCAAGTTCATACTCGCAGTTTTTCAAGAGTGCGTGTCCTCGCGCTTATAGCTACGCTTATGATGATGGAACAAGCACTTTTACTTGTGATTCTGCTGATTATTCCATCACTTTTTGTCCCTCAAGTTCGACCTCAAGTTCGACCCAATCTGGGAACGAGAAATCTCCAACAAGTTCGATCGATTCCGGGAACGAGAAATCTCCATTGCCTGAGGAGATGGATATATATGGGGGACATGTGAACTTCACAGCCAACAATGTTATGATTGCTGCTATTATTTCTTTTGTTTTGATCATAGTCACACGGTTCGCCATTCCCTTCGGTACGTGGTACGAATTCGGGTACGCGGTTCGTGACTTTCAAAAAACTAGGTACGTGGGGGGTATACAGAGTCGGTACGCTATTTGGGTTCATGGTACGTTCAAATATAATAATCGGTACGTTACTAATTAAAAAAATATTTAATTAACAAAAAATATAATAGAAAATGAAAACTATTTTTTTAGAGAGCAAATAAAAATTCATTCATTATATTAAAAGCCCAACGTGGTTCAATCACAGCACAATTGCAAACAGAATTGATATAACAACCAATAGAAACACACACCCATTGATCTATTCCATCCAAAAAATTCTGCTAAATTCTCTCAACAAAGAATATCAAGTCTTAAAAAAAAAGAGTTAAAATATTAATACATCATTTTTTTTTTTGAAGAAAAAATATTAATACATCATATTCATTCATTCAAAATCTGAGCCTTACATAATTAATGTATATTTCCTAAAAAAAATAATTATTGTGTATTTCTTTTTTTAAGGAATAATAAAAATGTATTGTTGACAGCTATTGACAAAGTAATTTAATTATTGTTTATTTAAAGAAAAACCATTAAATTAGTTGGGATACCCACCATGCATCGTTTATAAAAAAAACATAAAAAACACATAAAAAAAAAACTCCTATTACCGAGAAAGAAGAAAAAACATAAAAAAAAAAAAAAAAACCTAATTTCACTTTACCAAATAACGAGCCTCTCTCTCTCTCTAACCTTTCGTCTTCAATTACAGAAATACATCCATCTTCATCAACACACTCCTTTCTTCTTCTTCTTCTTCACTGAAATTGTCTCTCTCTCTAACCTTTCGTCTTCAATTCCAGAAATACATCCATCTTCATCACACACACTCCTTTCTTCTTCTTCTTCACTGGAATTGCTTCTTTTATATCTATCTTGAGTCATATGTTGAAAATCGAAACTGAAAAAGCGGAAATCCCGACATCTTTTCACGGTTCCTCTTCTGGTTCACCGGTACGTTTATTTCTGCGAATTGTTGTACGAATTTCGACGAACCGGTTCGCAAAAGTACCGCGAACCGGTTCGCGCGAACCAATTCGCGGTTCTCCTCTAGGGTGGCGAATTATGTGACTATGGTTTTGATTGTGTTTTTGTGGTGAATTTGGTAAGCTATGACTTACCACTTTTCATCTTGAATAACCATGCAAAAAAATCAATTAGTTTATTTTTTACTAGCAAGATTAATTAGTTATTACATCTCTAGGAACAGAATTATGCAGGTAGCAAAGTTCACAAATTAAGGCTTTCTAGGAAATTTACAGTATCGCAGTTTATAATTAGAGAGTATCAAACACCATGTCTTATGATCAAGGTTATCAAAATCGGGACTTTACTTCAAGTCGAAAGGGACTTGCAAAATCGGGACTCGTGAAATCGCAATCAAAATCGAAGGATTTTACTCAAGGACTTTTGTAGAATCGATATAGGATAGCAAAGTCGGGACTCGTAAAATCGCAATCAAAATCGAGGATTCTACCAAAACAAAAATAATGTTAAATATATGTTATATATTGCATATAGTCATAAATGACTAAAGTTCAAAATCCACAAAATACATATACATAAATGTGGGGGGAAGTGAAAGAATGAAATTTTTTTGCCTTTTGGGTATTTATAGAACAGGTCAGGGATTCAAATCGGGTCAATTTACGAACCGGGTCAAAAATTGACCCTTATCAAAAAAATGAACAAAATCCATCAAAATCCTGCGATTTTGAATGGATTTCACGATTTTGTGCGATTTTGTGCGACTTTGATAGGATTTTGCTTGTTTTTGGGATTTTGCTATGGATTTGAGTCGTTGAAGCTACGCAAAGTCGCAAAAACCAGGATTTTGGGACTTAAGTCGCGTTTTTGATAACAATGCTTATGATGATTGAATTTTATATTACTTGTGATTTGTTCTTGATTTAGTTTTTTTTGCATATGATCATAATTAGGTCATCTAATTACAATCTGAATTTGAAACGGCGGATGATCATATTAACCTATCAAAACAAACATATCAACTATATGTATAGAATGAAGATTGAAGGTAACTTAACTCACAAAGAGTACGAAACGGACGAAAACAGCGGCGAGTTGAAAACGTGAGTCCAAAACCACGACGAGCAAAAAAGAATATTGAACAGAACACCACTGATTTGCAGAAAACGACGGTAAGATGAAAAATGACGAGCAAGGATGAGATCAATGATGAAAGAAATGATACCCAATGCAACAAACAAAGATGAGTATAAAAGTAACTATAACCAATGATTTAGATGTTGTCCAATGCTTCAATGGACGAAAAACATCGATAATGAAAAAATATGAGAAGTTACAACAACAATGAGAAAAGAAACTGAAAAGGTGTGATTGCAGTTTTGTTGCGTTATAAAACACACTTAGAGCAAGTGTACTCTATTGCAGAAGTAGTATAAAAGATTATCGTATCCACAGGGATTAATTGACAAGTACCAAACTAATTAAGATAAATTTATTATTTAGACGAATAGCTGGTAGAATGTTTCGGTAACCAAATAAAAAGTAATGACGAAGAAGGATAAAAATGCGAGATGTAAATCAATAGAGAGAGGTCTAGGGTCGCGGTTTCACTTGCAAGTTTCGATTCCTTTATGTCTAGTTCTAATTAAAATCCTATTTTTATTCAATCACCAATCCCTTTACTAAAATTATTAATCCGTTTGGTCATTCGTGATTTAATATTCTTTTTCCTAAATTAACACTTTGTTTGATCATGCAAAGAGTTCAAATTCAAGAAAAGCATTAAATGTAAAAAAGTTGAATGATTGGAAGACTAAAATTAAGATTTGATCATGCAATAATTCTAGTCTTAATTGTTCTATAGGTCCACCAATCAACTGATTGTTAACATGCAAAGGTTTGATCATTCCTAATCATGTGATTAAATTAATAGAACAAATTTGATTGGAATAGAAATAGAAATTATAATTAATAAACTAGAACATAACAAGGTATCTCAACATACAAGATTCACCCAAGACCCTAGAGACTAATTTAGCTATCCATAATCAAAAACAACACTAAAATAGAGATAGAATTCATGAAATTAAGAGTAAGAAATAACCTTAAAAGGAAGGAAAATTCTTGCTCCAAGATTTGAATCTTCAATTTCTATCCCCAAAGCTCTTGAATTAATTCTGCTCTCTCTGTTGCGTGTAGTGTATATTGAAGTATGTGTAG
Protein sequence

>MS.gene92395.t1

MAASTQSTIALVTLILFQYLTGSYATTFTIVNECNYTVWPGILSGAGTTPFSTTGFALQPGESNALAVPPKWSGRLWGRTLCSQDSTGKFSCVTGDCASSTIECAGGNAQPPATLAEFTLNGANGLDFFDVSLVDGYNLPMTIEPHGATGGGNCMTTGCMVDLNAACPTELKVMSNGGGVVCKSACEAFGDPQYCCSGAYASPDTCKPSSYSQFFKSACPRAYSYAYDDGTSTFTCDSADYSITFCPSSSTSSSTQSGNEKSPTSSIDSGNEKSPLPEEMDIYGGHVNFTANNCILKYV