Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003833.t1 | XP_013456329.1 | 97.6 | 659 | 16 | 0 | 1 | 659 | 1 | 659 | 0.00E+00 | 1330.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003833.t1 | Q9XIA9 | 67.9 | 654 | 206 | 4 | 9 | 658 | 11 | 664 | 6.8e-276 | 951.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003833.t1 | A0A072UX04 | 97.6 | 659 | 16 | 0 | 1 | 659 | 1 | 659 | 0.0e+00 | 1330.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene003833 | MS.gene22308 | PPI |
MS.gene06068 | MS.gene003833 | PPI |
MS.gene003833 | MS.gene07328 | PPI |
MS.gene003833 | MS.gene050419 | PPI |
MS.gene70469 | MS.gene003833 | PPI |
MS.gene003833 | MS.gene71307 | PPI |
MS.gene003833 | MS.gene20877 | PPI |
MS.gene072680 | MS.gene003833 | PPI |
MS.gene003833 | MS.gene55795 | PPI |
MS.gene003833 | MS.gene045073 | PPI |
MS.gene99632 | MS.gene003833 | PPI |
MS.gene003833 | MS.gene005494 | PPI |
MS.gene003833 | MS.gene90444 | PPI |
MS.gene003833 | MS.gene07080 | PPI |
MS.gene003833 | MS.gene072726 | PPI |
MS.gene003833 | MS.gene33594 | PPI |
MS.gene003833 | MS.gene048924 | PPI |
MS.gene003833 | MS.gene28831 | PPI |
MS.gene003833 | MS.gene80076 | PPI |
MS.gene026629 | MS.gene003833 | PPI |
MS.gene003833 | MS.gene63009 | PPI |
MS.gene003833 | MS.gene044334 | PPI |
MS.gene003833 | MS.gene22309 | PPI |
MS.gene003833 | MS.gene21662 | PPI |
MS.gene003833 | MS.gene25695 | PPI |
MS.gene21663 | MS.gene003833 | PPI |
MS.gene003833 | MS.gene75435 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003833.t1 | MTR_4g068670 | 97.572 | 659 | 16 | 0 | 1 | 659 | 1 | 659 | 0.0 | 1347 |
MS.gene003833.t1 | MTR_1g034360 | 79.848 | 660 | 131 | 2 | 1 | 658 | 1 | 660 | 0.0 | 1131 |
MS.gene003833.t1 | MTR_5g009350 | 57.975 | 652 | 272 | 2 | 5 | 654 | 6 | 657 | 0.0 | 812 |
MS.gene003833.t1 | MTR_5g009350 | 58.255 | 642 | 266 | 2 | 5 | 644 | 6 | 647 | 0.0 | 803 |
MS.gene003833.t1 | MTR_8g099420 | 57.274 | 653 | 277 | 2 | 5 | 655 | 7 | 659 | 0.0 | 799 |
MS.gene003833.t1 | MTR_5g009360 | 57.209 | 652 | 277 | 2 | 5 | 654 | 6 | 657 | 0.0 | 797 |
MS.gene003833.t1 | MTR_5g009360 | 59.693 | 521 | 208 | 2 | 136 | 654 | 11 | 531 | 0.0 | 662 |
MS.gene003833.t1 | MTR_5g009350 | 56.102 | 549 | 239 | 2 | 5 | 551 | 6 | 554 | 0.0 | 659 |
MS.gene003833.t1 | MTR_5g009350 | 56.747 | 541 | 232 | 2 | 5 | 543 | 6 | 546 | 0.0 | 658 |
MS.gene003833.t1 | MTR_7g109830 | 46.565 | 655 | 346 | 3 | 5 | 656 | 4 | 657 | 0.0 | 627 |
MS.gene003833.t1 | MTR_1g086600 | 45.137 | 658 | 353 | 4 | 5 | 656 | 26 | 681 | 0.0 | 600 |
MS.gene003833.t1 | MTR_1g104810 | 42.173 | 626 | 345 | 9 | 35 | 653 | 4 | 619 | 2.30e-162 | 480 |
MS.gene003833.t1 | MTR_1g104810 | 42.351 | 621 | 336 | 9 | 38 | 653 | 83 | 686 | 6.79e-162 | 481 |
MS.gene003833.t1 | MTR_3g082660 | 32.573 | 614 | 376 | 14 | 65 | 651 | 124 | 726 | 1.06e-94 | 308 |
MS.gene003833.t1 | MTR_1g030290 | 31.901 | 605 | 373 | 14 | 73 | 651 | 103 | 694 | 7.06e-93 | 302 |
MS.gene003833.t1 | MTR_3g087980 | 31.331 | 616 | 378 | 15 | 65 | 651 | 93 | 692 | 1.97e-91 | 298 |
MS.gene003833.t1 | MTR_3g084450 | 24.814 | 673 | 406 | 21 | 47 | 652 | 81 | 720 | 3.07e-45 | 172 |
MS.gene003833.t1 | MTR_3g084470 | 25.599 | 668 | 404 | 23 | 47 | 652 | 79 | 715 | 3.39e-43 | 166 |
MS.gene003833.t1 | MTR_3g084450 | 27.463 | 477 | 284 | 15 | 220 | 652 | 54 | 512 | 2.10e-40 | 155 |
MS.gene003833.t1 | MTR_8g083170 | 25.702 | 677 | 397 | 28 | 47 | 652 | 83 | 724 | 1.06e-36 | 147 |
MS.gene003833.t1 | MTR_2g095510 | 24.606 | 508 | 269 | 23 | 76 | 561 | 53 | 468 | 2.12e-22 | 102 |
MS.gene003833.t1 | MTR_2g095510 | 24.249 | 466 | 253 | 21 | 76 | 519 | 53 | 440 | 7.66e-22 | 99.4 |
MS.gene003833.t1 | MTR_4g057730 | 23.670 | 545 | 303 | 22 | 27 | 541 | 3 | 464 | 7.62e-21 | 96.7 |
MS.gene003833.t1 | MTR_4g057730 | 23.218 | 547 | 303 | 22 | 27 | 541 | 3 | 464 | 1.03e-20 | 96.7 |
MS.gene003833.t1 | MTR_5g007640 | 24.116 | 481 | 288 | 15 | 79 | 546 | 98 | 514 | 4.09e-20 | 95.1 |
MS.gene003833.t1 | MTR_4g057730 | 23.518 | 523 | 288 | 21 | 27 | 519 | 3 | 443 | 5.09e-20 | 94.0 |
MS.gene003833.t1 | MTR_8g074040 | 22.989 | 522 | 307 | 18 | 44 | 541 | 57 | 507 | 5.30e-18 | 88.6 |
MS.gene003833.t1 | MTR_8g074120 | 23.557 | 433 | 247 | 13 | 132 | 541 | 47 | 418 | 2.63e-17 | 85.9 |
MS.gene003833.t1 | MTR_4g005750 | 23.992 | 496 | 274 | 21 | 76 | 546 | 51 | 468 | 2.84e-16 | 82.8 |
MS.gene003833.t1 | MTR_1g063120 | 22.288 | 507 | 291 | 21 | 68 | 546 | 48 | 479 | 4.20e-16 | 82.4 |
MS.gene003833.t1 | MTR_3g088880 | 26.110 | 383 | 217 | 14 | 150 | 519 | 128 | 457 | 7.78e-16 | 81.3 |
MS.gene003833.t1 | MTR_8g074040 | 24.194 | 434 | 243 | 16 | 132 | 541 | 18 | 389 | 1.46e-14 | 77.0 |
MS.gene003833.t1 | MTR_5g023730 | 21.311 | 488 | 307 | 17 | 79 | 548 | 44 | 472 | 4.54e-14 | 75.9 |
MS.gene003833.t1 | MTR_2g044180 | 23.922 | 255 | 181 | 5 | 79 | 325 | 47 | 296 | 1.30e-11 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene003833.t1 | AT1G49430 | 67.890 | 654 | 206 | 4 | 9 | 658 | 11 | 664 | 0.0 | 958 |
MS.gene003833.t1 | AT1G64400 | 54.434 | 654 | 295 | 3 | 5 | 655 | 6 | 659 | 0.0 | 776 |
MS.gene003833.t1 | AT4G23850 | 54.615 | 650 | 293 | 2 | 5 | 652 | 7 | 656 | 0.0 | 772 |
MS.gene003833.t1 | AT4G11030 | 54.268 | 656 | 298 | 2 | 5 | 658 | 7 | 662 | 0.0 | 761 |
MS.gene003833.t1 | AT1G49430 | 66.463 | 492 | 162 | 3 | 9 | 497 | 11 | 502 | 0.0 | 706 |
MS.gene003833.t1 | AT2G47240 | 47.626 | 653 | 336 | 3 | 5 | 653 | 4 | 654 | 0.0 | 634 |
MS.gene003833.t1 | AT2G47240 | 47.626 | 653 | 336 | 3 | 5 | 653 | 4 | 654 | 0.0 | 634 |
MS.gene003833.t1 | AT2G47240 | 47.626 | 653 | 336 | 3 | 5 | 653 | 4 | 654 | 0.0 | 634 |
MS.gene003833.t1 | AT2G47240 | 48.911 | 597 | 299 | 3 | 61 | 653 | 1 | 595 | 0.0 | 597 |
MS.gene003833.t1 | AT5G27600 | 43.121 | 596 | 326 | 7 | 62 | 653 | 103 | 689 | 9.10e-167 | 494 |
MS.gene003833.t1 | AT3G05970 | 44.221 | 597 | 318 | 8 | 62 | 653 | 103 | 689 | 5.52e-166 | 492 |
MS.gene003833.t1 | AT2G04350 | 32.684 | 667 | 378 | 18 | 39 | 651 | 70 | 719 | 2.10e-100 | 323 |
MS.gene003833.t1 | AT2G04350 | 32.684 | 667 | 378 | 18 | 39 | 651 | 70 | 719 | 2.10e-100 | 323 |
MS.gene003833.t1 | AT1G77590 | 32.033 | 615 | 356 | 16 | 73 | 651 | 102 | 690 | 5.89e-94 | 305 |
MS.gene003833.t1 | AT1G77590 | 32.394 | 568 | 322 | 16 | 120 | 651 | 3 | 544 | 7.13e-85 | 277 |
MS.gene003833.t1 | AT3G23790 | 27.673 | 477 | 283 | 14 | 220 | 652 | 264 | 722 | 5.35e-38 | 150 |
MS.gene003833.t1 | AT4G14070 | 24.138 | 696 | 422 | 25 | 19 | 651 | 74 | 726 | 3.24e-37 | 148 |
MS.gene003833.t1 | AT3G21240 | 25.427 | 527 | 298 | 24 | 38 | 546 | 32 | 481 | 1.26e-22 | 102 |
MS.gene003833.t1 | AT3G21240 | 25.427 | 527 | 298 | 24 | 38 | 546 | 32 | 481 | 1.42e-22 | 102 |
MS.gene003833.t1 | AT3G21240 | 25.427 | 527 | 298 | 24 | 38 | 546 | 32 | 481 | 1.42e-22 | 102 |
MS.gene003833.t1 | AT4G05160 | 24.859 | 531 | 292 | 23 | 48 | 561 | 33 | 473 | 1.17e-20 | 96.7 |
MS.gene003833.t1 | AT1G51680 | 24.780 | 569 | 328 | 22 | 38 | 581 | 34 | 527 | 1.52e-19 | 93.2 |
MS.gene003833.t1 | AT1G51680 | 24.581 | 537 | 309 | 20 | 38 | 553 | 34 | 495 | 2.99e-19 | 92.4 |
MS.gene003833.t1 | AT1G51680 | 24.717 | 530 | 303 | 20 | 38 | 546 | 34 | 488 | 3.43e-19 | 91.7 |
MS.gene003833.t1 | AT1G65060 | 23.404 | 470 | 252 | 19 | 79 | 520 | 77 | 466 | 1.72e-16 | 83.6 |
MS.gene003833.t1 | AT1G65060 | 23.454 | 469 | 251 | 19 | 79 | 519 | 77 | 465 | 2.44e-16 | 82.8 |
MS.gene003833.t1 | AT4G19010 | 23.908 | 435 | 244 | 13 | 138 | 541 | 106 | 484 | 4.28e-15 | 79.3 |
MS.gene003833.t1 | AT2G47245 | 44.000 | 75 | 42 | 0 | 21 | 95 | 53 | 127 | 5.75e-15 | 72.4 |
MS.gene003833.t1 | AT3G21230 | 33.742 | 163 | 100 | 7 | 384 | 541 | 331 | 490 | 1.09e-13 | 74.7 |
MS.gene003833.t1 | AT3G21230 | 33.742 | 163 | 100 | 7 | 384 | 541 | 331 | 490 | 1.12e-13 | 74.7 |
MS.gene003833.t1 | AT3G21230 | 33.742 | 163 | 100 | 7 | 384 | 541 | 331 | 490 | 1.25e-13 | 74.3 |
Find 149 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTCGAGGGCCTGTCTTTC+AGG | 0.080593 | 4.2:-38052262 | None:intergenic |
AAAAGCAAGAAAATATATTT+TGG | 0.204586 | 4.2:+38052339 | MS.gene003833:CDS |
GGGGCGCCTCAATTGGATTT+TGG | 0.218449 | 4.2:+38050549 | MS.gene003833:CDS |
TGATTAGCTATTGTGAGTTT+TGG | 0.237148 | 4.2:+38049856 | MS.gene003833:intron |
GCAGGATATCAGATTCTTAA+TGG | 0.247286 | 4.2:+38050670 | MS.gene003833:intron |
ATTCTTAATGGAAGATATTC+AGG | 0.260511 | 4.2:+38050682 | MS.gene003833:CDS |
TGAATTTCTCCAGGGAAATC+TGG | 0.265545 | 4.2:+38050072 | MS.gene003833:intron |
TGCGCGCAGATTTGGGTCTA+TGG | 0.296060 | 4.2:+38052202 | MS.gene003833:intron |
GGTGACCGTTGTGGCATATA+TGG | 0.296099 | 4.2:+38049100 | MS.gene003833:CDS |
TCCATTGCAATTATCCATTC+AGG | 0.310666 | 4.2:-38049133 | None:intergenic |
ATGATAAACTCCACAGCATT+AGG | 0.321331 | 4.2:-38049462 | None:intergenic |
TCTCCAGGGAAATCTGGATT+TGG | 0.330393 | 4.2:+38050078 | MS.gene003833:intron |
TCTCCTTTGGCACAAGGATA+TGG | 0.337793 | 4.2:+38051304 | MS.gene003833:CDS |
TTCTTAATAACGACGCCTTT+TGG | 0.342253 | 4.2:-38050166 | None:intergenic |
CGAGTTCGAATGTTGTTATC+AGG | 0.347010 | 4.2:+38051229 | MS.gene003833:CDS |
CTCTCCACATCAAAGGGAAT+TGG | 0.349623 | 4.2:-38052528 | None:intergenic |
AAGCAGCACCTTTCTTTGAT+AGG | 0.349892 | 4.2:+38051092 | MS.gene003833:CDS |
ACTGAAGAGGTTATGGTTGA+TGG | 0.352245 | 4.2:+38051719 | MS.gene003833:CDS |
TTCATATGTGATCCATTCAT+AGG | 0.360394 | 4.2:-38048931 | None:intergenic |
GGTCTCACCGAATGTTGTTC+GGG | 0.367835 | 4.2:+38051509 | MS.gene003833:intron |
AGATCTTACTGAAGAGGTTA+TGG | 0.369274 | 4.2:+38051712 | MS.gene003833:CDS |
ATCTACAGGGGCGCCTCAAT+TGG | 0.373414 | 4.2:+38050542 | MS.gene003833:CDS |
GGATTCAAGCCTTGCTTCAA+TGG | 0.375018 | 4.2:-38051594 | None:intergenic |
GAGTTTATGAGGGTTACTTT+TGG | 0.376425 | 4.2:+38051280 | MS.gene003833:CDS |
AGGTCTCACCGAATGTTGTT+CGG | 0.385529 | 4.2:+38051508 | MS.gene003833:intron |
TATGATGCTGCCGTCCGAAT+TGG | 0.391152 | 4.2:+38048960 | MS.gene003833:CDS |
AATTGAGGCGCCCCTGTAGA+TGG | 0.393299 | 4.2:-38050540 | None:intergenic |
AATTTCTCCACGTGGTTGAC+TGG | 0.395081 | 4.2:-38051645 | None:intergenic |
TTGGATGAACTCAACATCAT+TGG | 0.406553 | 4.2:+38052358 | MS.gene003833:CDS |
CCTTGCTTCAATGGCTGTCA+TGG | 0.417626 | 4.2:-38051585 | None:intergenic |
ATCTTGACGCTTGTGGTAAC+CGG | 0.418161 | 4.2:-38051693 | None:intergenic |
TGACCCAGCATTGGTTTGCT+AGG | 0.419369 | 4.2:-38048080 | None:intergenic |
TGGAATAGGTCGCCATTATC+TGG | 0.420971 | 4.2:-38050520 | None:intergenic |
GAATGCTTTGACAGCAAGTT+GGG | 0.424994 | 4.2:+38051040 | MS.gene003833:intron |
AAGACAGGCCCTCGAGGATT+GGG | 0.425580 | 4.2:+38052267 | MS.gene003833:CDS |
GGTCTCTTCAATTTGAATGT+TGG | 0.426846 | 4.2:-38052564 | None:intergenic |
TCATGTATATGACCAGATAA+TGG | 0.434521 | 4.2:+38050508 | MS.gene003833:CDS |
CTGATAGATAAAACAAGCAT+TGG | 0.435144 | 4.2:+38051201 | MS.gene003833:intron |
TCCTCATGGCGGAACCAATT+CGG | 0.436923 | 4.2:-38048974 | None:intergenic |
TGTCTGTTAGAGAAAGCATT+TGG | 0.439284 | 4.2:-38050222 | None:intergenic |
AAAGACAGGCCCTCGAGGAT+TGG | 0.440450 | 4.2:+38052266 | MS.gene003833:CDS |
CCTCGAGGGCCTGTCTTTCA+GGG | 0.443278 | 4.2:-38052261 | None:intergenic |
GGCACGTAGAAGAGTTTATG+AGG | 0.443773 | 4.2:+38051269 | MS.gene003833:CDS |
GTGCCCTAGCAAACCAATGC+TGG | 0.447637 | 4.2:+38048076 | MS.gene003833:CDS |
CAGGAGCTGCTCCTTTGTCT+AGG | 0.448283 | 4.2:+38051248 | MS.gene003833:CDS |
TGGCGACCTATTCCATCTAC+AGG | 0.449046 | 4.2:+38050528 | MS.gene003833:CDS |
TGCTTTCTCTAACAGACAAA+GGG | 0.457253 | 4.2:+38050227 | MS.gene003833:CDS |
GCTGGTAAAAGCAGTTCATC+TGG | 0.457715 | 4.2:+38052503 | MS.gene003833:CDS |
GTTGATGGTTGGTTTCATAC+AGG | 0.462235 | 4.2:+38051734 | MS.gene003833:CDS |
GCAGTGCCCTCTTATAGCTT+CGG | 0.464981 | 4.2:+38052054 | MS.gene003833:CDS |
TTTCATGTCTGAAGTGTTGT+CGG | 0.465627 | 4.2:+38050195 | MS.gene003833:CDS |
TTGGTGCATCCTGCTTCTCA+TGG | 0.466724 | 4.2:+38049917 | MS.gene003833:CDS |
CTATGCTAAAGATGGTTTGT+TGG | 0.472097 | 4.2:+38047700 | MS.gene003833:CDS |
TGCAGGCTGGTCCCTATGAA+TGG | 0.473025 | 4.2:+38048919 | MS.gene003833:intron |
AAAGGTGCTGCTTTGTCTTG+TGG | 0.473479 | 4.2:-38051082 | None:intergenic |
AGATCTCTCTCCACATCAAA+GGG | 0.477890 | 4.2:-38052534 | None:intergenic |
AAGAAAGAAGTTGAGGAACT+TGG | 0.482103 | 4.2:+38049898 | MS.gene003833:CDS |
GCTTGAATCCGTGCCGGAGA+TGG | 0.487293 | 4.2:+38051607 | MS.gene003833:CDS |
AAGTTGGGATATCTAAATAA+TGG | 0.489028 | 4.2:+38051055 | MS.gene003833:CDS |
AAACCTAGGGTGTCATATAG+TGG | 0.493328 | 4.2:-38049327 | None:intergenic |
AAACTCTTCCCATGAGAAGC+AGG | 0.493686 | 4.2:-38049926 | None:intergenic |
GAAGCACCCCGAACAACATT+CGG | 0.494384 | 4.2:-38051516 | None:intergenic |
ATGGATCTAATTGTCCTGAA+TGG | 0.497007 | 4.2:+38049119 | MS.gene003833:CDS |
AGAACAAGGTATTCCCTCTC+AGG | 0.498928 | 4.2:-38051670 | None:intergenic |
AGAGAAGTACACATCGTCTT+CGG | 0.502650 | 4.2:-38050471 | None:intergenic |
CTTGAATCCGTGCCGGAGAT+GGG | 0.506106 | 4.2:+38051608 | MS.gene003833:CDS |
AGTTGTGATCCCTGAAAGAC+AGG | 0.511172 | 4.2:+38052252 | MS.gene003833:CDS |
AAACATACCGAAGCTATAAG+AGG | 0.513625 | 4.2:-38052061 | None:intergenic |
ATGTACACAAGTGGAACTAC+TGG | 0.514736 | 4.2:+38050139 | MS.gene003833:CDS |
CAGTAAGATCTTGACGCTTG+TGG | 0.515457 | 4.2:-38051700 | None:intergenic |
GCCTTGCCAAAATCCAATTG+AGG | 0.522388 | 4.2:-38050555 | None:intergenic |
ATTGGAGAATGGCTGCCAAA+TGG | 0.524066 | 4.2:+38051941 | MS.gene003833:CDS |
ATGGGAAGAGTTTCTTCAGT+TGG | 0.524380 | 4.2:+38049936 | MS.gene003833:CDS |
GACCCAGCATTGGTTTGCTA+GGG | 0.526702 | 4.2:-38048079 | None:intergenic |
AAAATCATTACAGGTGACAT+TGG | 0.527671 | 4.2:+38051923 | MS.gene003833:intron |
AGAATGCTTTGACAGCAAGT+TGG | 0.529958 | 4.2:+38051039 | MS.gene003833:intron |
TGATAGATAAAACAAGCATT+GGG | 0.531712 | 4.2:+38051202 | MS.gene003833:intron |
TAGATCTCTCTCCACATCAA+AGG | 0.534676 | 4.2:-38052535 | None:intergenic |
AGATGCATCTATGCTAAAGA+TGG | 0.539890 | 4.2:+38047692 | MS.gene003833:CDS |
CTTGCTTCAATGGCTGTCAT+GGG | 0.543159 | 4.2:-38051584 | None:intergenic |
AATAACAAAATTTCATCAGA+AGG | 0.544297 | 4.2:+38050905 | MS.gene003833:CDS |
GGCGCCCCTGTAGATGGAAT+AGG | 0.544985 | 4.2:-38050534 | None:intergenic |
AGAGGGAATACCTTGTTCTC+CGG | 0.547676 | 4.2:+38051674 | MS.gene003833:CDS |
GGAACTACTGGTGAACCAAA+AGG | 0.548158 | 4.2:+38050151 | MS.gene003833:CDS |
ATACCATATCCTTGTGCCAA+AGG | 0.551717 | 4.2:-38051307 | None:intergenic |
CTATACACGGGACCTGCTGA+TGG | 0.553257 | 4.2:-38047671 | None:intergenic |
AGTGCATCATATCCCATCTC+CGG | 0.553360 | 4.2:-38051620 | None:intergenic |
CAACTATACAAGGAAGCAAA+GGG | 0.554406 | 4.2:+38052821 | MS.gene003833:CDS |
TTTGGATCTCCTTTGGCACA+AGG | 0.557275 | 4.2:+38051298 | MS.gene003833:CDS |
TCATATGTGATCCATTCATA+GGG | 0.559220 | 4.2:-38048930 | None:intergenic |
AACACAAGCCTATCAAAGAA+AGG | 0.560047 | 4.2:-38051100 | None:intergenic |
AACATCTTCAAATTGTCTCA+AGG | 0.563185 | 4.2:+38051992 | MS.gene003833:CDS |
ATGCTTTCTCTAACAGACAA+AGG | 0.563403 | 4.2:+38050226 | MS.gene003833:CDS |
TGGTGCATCCTGCTTCTCAT+GGG | 0.565803 | 4.2:+38049918 | MS.gene003833:CDS |
GCGTCAAGATCTTACTGAAG+AGG | 0.568382 | 4.2:+38051706 | MS.gene003833:CDS |
ATTGACACCACGCCTCCTCA+TGG | 0.568612 | 4.2:-38048988 | None:intergenic |
GGAACCAATTCCCTTTGATG+TGG | 0.569636 | 4.2:+38052524 | MS.gene003833:CDS |
GGCGACCTATTCCATCTACA+GGG | 0.570583 | 4.2:+38050529 | MS.gene003833:CDS |
TGCCCTAGCAAACCAATGCT+GGG | 0.572632 | 4.2:+38048077 | MS.gene003833:CDS |
TGCACAATCATGTACACAAG+TGG | 0.574438 | 4.2:+38050130 | MS.gene003833:CDS |
CTCAGGCAAATTTCTCCACG+TGG | 0.575376 | 4.2:-38051653 | None:intergenic |
TCAACTATACAAGGAAGCAA+AGG | 0.578184 | 4.2:+38052820 | MS.gene003833:CDS |
GTGGAGAAATTTGCCTGAGA+GGG | 0.579330 | 4.2:+38051657 | MS.gene003833:CDS |
CCATGACAGCCATTGAAGCA+AGG | 0.580357 | 4.2:+38051585 | MS.gene003833:CDS |
CCCTGAAAGACAGGCCCTCG+AGG | 0.584538 | 4.2:+38052261 | MS.gene003833:CDS |
CAAGGAAGCAAAGGGAGCAA+TGG | 0.584744 | 4.2:+38052829 | MS.gene003833:CDS |
AGCAAGGCTTGAATCCGTGC+CGG | 0.585755 | 4.2:+38051601 | MS.gene003833:CDS |
AAGAGGTTATGGTTGATGGT+TGG | 0.585803 | 4.2:+38051723 | MS.gene003833:CDS |
CACACAAAAGAAAGAAGTTG+AGG | 0.586579 | 4.2:+38049891 | MS.gene003833:CDS |
TGTGCAGGGACTCTGCAGCA+AGG | 0.589063 | 4.2:+38048054 | MS.gene003833:intron |
TATCACAAGGGTGACCGTTG+TGG | 0.589606 | 4.2:+38049091 | MS.gene003833:intron |
TTGTATTGATCAACTATACA+AGG | 0.593056 | 4.2:+38052811 | MS.gene003833:CDS |
ATCATATCCCATCTCCGGCA+CGG | 0.593835 | 4.2:-38051615 | None:intergenic |
CATGGAGATTGAAAATGAGA+AGG | 0.594076 | 4.2:-38047728 | None:intergenic |
GAATTGGTTCCGCCATGAGG+AGG | 0.594434 | 4.2:+38048976 | MS.gene003833:CDS |
TTACAGGTGACATTGGAGAA+TGG | 0.595467 | 4.2:+38051930 | MS.gene003833:intron |
TCCTGAATGGATAATTGCAA+TGG | 0.596918 | 4.2:+38049132 | MS.gene003833:CDS |
GGTTCCGCCATGAGGAGGCG+TGG | 0.597037 | 4.2:+38048981 | MS.gene003833:CDS |
GGATGTATACACTGTGAAAG+TGG | 0.600967 | 4.2:+38047619 | MS.gene003833:CDS |
TGGTCATATACATGAGCAAG+AGG | 0.603137 | 4.2:-38050500 | None:intergenic |
TGAATGGATAATTGCAATGG+AGG | 0.604812 | 4.2:+38049135 | MS.gene003833:CDS |
CTTCACTGCCCAATCCTCGA+GGG | 0.607251 | 4.2:-38052275 | None:intergenic |
TCCGAATTGGTTCCGCCATG+AGG | 0.608114 | 4.2:+38048973 | MS.gene003833:CDS |
ACAGTTGCTAAAGCACTACA+AGG | 0.609571 | 4.2:+38052587 | MS.gene003833:CDS |
GCTTCACTGCCCAATCCTCG+AGG | 0.609629 | 4.2:-38052276 | None:intergenic |
GTTTACGATCGTGTTTACGC+TGG | 0.611797 | 4.2:+38050740 | MS.gene003833:CDS |
TGATAGGCTTGTGTTTGACA+AGG | 0.613130 | 4.2:+38051108 | MS.gene003833:CDS |
GCAAACCAATGCTGGGTCAG+CGG | 0.613487 | 4.2:+38048084 | MS.gene003833:CDS |
AGCATAGATGCATCTATACA+CGG | 0.615158 | 4.2:-38047684 | None:intergenic |
CTTGTGGTAACCGGAGAACA+AGG | 0.617172 | 4.2:-38051684 | None:intergenic |
CGTGGAGAAATTTGCCTGAG+AGG | 0.624184 | 4.2:+38051656 | MS.gene003833:CDS |
GCTCCACTATATGACACCCT+AGG | 0.626773 | 4.2:+38049324 | MS.gene003833:CDS |
TGAATGGATCACATATGAAG+AGG | 0.627275 | 4.2:+38048935 | MS.gene003833:CDS |
TTGTAGTGCTTTAGCAACTG+TGG | 0.631401 | 4.2:-38052585 | None:intergenic |
AACATACCGAAGCTATAAGA+GGG | 0.634179 | 4.2:-38052060 | None:intergenic |
TAGATAAAACAAGCATTGGG+TGG | 0.647577 | 4.2:+38051205 | MS.gene003833:intron |
CATGGCGGAACCAATTCGGA+CGG | 0.647712 | 4.2:-38048970 | None:intergenic |
GCACGTAGAAGAGTTTATGA+GGG | 0.650917 | 4.2:+38051270 | MS.gene003833:CDS |
TCTTCTACGTGCCTAGACAA+AGG | 0.651689 | 4.2:-38051259 | None:intergenic |
GCATAGATGCATCTATACAC+GGG | 0.658326 | 4.2:-38047683 | None:intergenic |
ATGCTATAGAAACTTCAGCA+TGG | 0.672567 | 4.2:-38049488 | None:intergenic |
GCTTTCTCTAACAGACAAAG+GGG | 0.673416 | 4.2:+38050228 | MS.gene003833:CDS |
ATAAACAGGTCCTAATGCTG+TGG | 0.675719 | 4.2:+38049452 | MS.gene003833:intron |
GTCTCACCGAATGTTGTTCG+GGG | 0.676004 | 4.2:+38051510 | MS.gene003833:CDS |
TAAACACGATCGTAAACTCG+AGG | 0.686356 | 4.2:-38050734 | None:intergenic |
TAGATCCATATATGCCACAA+CGG | 0.694046 | 4.2:-38049105 | None:intergenic |
GACACCACGCCTCCTCATGG+CGG | 0.710962 | 4.2:-38048985 | None:intergenic |
GCGACCTATTCCATCTACAG+GGG | 0.711365 | 4.2:+38050530 | MS.gene003833:CDS |
GCACTCTCCAGTCAACCACG+TGG | 0.730635 | 4.2:+38051638 | MS.gene003833:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTTAAAAATTAAAAAATG+TGG | + | chr4.2:38047889-38047908 | MS.gene003833:intron | 10.0% |
!! | ACAAATGAAATAATTAATGA+AGG | - | chr4.2:38050312-38050331 | None:intergenic | 15.0% |
!! | ATAAAAACTTCATACATTAA+TGG | - | chr4.2:38052180-38052199 | None:intergenic | 15.0% |
!! | ATTAGTTATTATTTCACAAA+AGG | - | chr4.2:38048414-38048433 | None:intergenic | 15.0% |
!! | ATTATCTTCAAAATATTCAA+TGG | - | chr4.2:38049639-38049658 | None:intergenic | 15.0% |
!! | ATTGATTAACACATTAATAA+TGG | + | chr4.2:38048786-38048805 | MS.gene003833:intron | 15.0% |
!! | ATTTAGTCATAAATTCTATA+TGG | - | chr4.2:38048814-38048833 | None:intergenic | 15.0% |
!! | TATAATCACTAAGATAAAAA+AGG | - | chr4.2:38052446-38052465 | None:intergenic | 15.0% |
!! | TCAAAATAGGTTTATAATTA+GGG | + | chr4.2:38048486-38048505 | MS.gene003833:intron | 15.0% |
!! | TTATCTTCAAAATATTCAAT+GGG | - | chr4.2:38049638-38049657 | None:intergenic | 15.0% |
!! | TTTAGTCATAAATTCTATAT+GGG | - | chr4.2:38048813-38048832 | None:intergenic | 15.0% |
!!! | AAAAGCAAGAAAATATATTT+TGG | + | chr4.2:38052339-38052358 | MS.gene003833:CDS | 15.0% |
!!! | ATTTTATCATAGAAGTTAAT+TGG | - | chr4.2:38049836-38049855 | None:intergenic | 15.0% |
!!! | CATTTAAGTAAATGAAATTT+TGG | - | chr4.2:38048312-38048331 | None:intergenic | 15.0% |
!!! | TTCATTTACTTAAATGTTTT+AGG | + | chr4.2:38048316-38048335 | MS.gene003833:intron | 15.0% |
!!! | TTTTGTGAAATAATAACTAA+TGG | + | chr4.2:38048413-38048432 | MS.gene003833:intron | 15.0% |
!!! | TTTTTTATTCCATCTTTTAA+TGG | + | chr4.2:38049803-38049822 | MS.gene003833:intron | 15.0% |
!! | AACATGTTTAACATACTAAA+TGG | - | chr4.2:38049202-38049221 | None:intergenic | 20.0% |
!! | AATAACAAAATTTCATCAGA+AGG | + | chr4.2:38050905-38050924 | MS.gene003833:CDS | 20.0% |
!! | ATATTTGATGAGAAAGAAAA+GGG | - | chr4.2:38047784-38047803 | None:intergenic | 20.0% |
!! | ATATTTGTTTGTGTCAAAAT+AGG | + | chr4.2:38048473-38048492 | MS.gene003833:intron | 20.0% |
!! | CAATAGGATAGAAATTATAA+AGG | - | chr4.2:38051007-38051026 | None:intergenic | 20.0% |
!! | GTCAAAATAGGTTTATAATT+AGG | + | chr4.2:38048485-38048504 | MS.gene003833:intron | 20.0% |
!! | TACTATAGTATTTGAATCTT+TGG | + | chr4.2:38051329-38051348 | MS.gene003833:intron | 20.0% |
!! | TATAACACTTTATCTTTGTA+GGG | + | chr4.2:38049158-38049177 | MS.gene003833:intron | 20.0% |
!! | TATATTTGATGAGAAAGAAA+AGG | - | chr4.2:38047785-38047804 | None:intergenic | 20.0% |
!! | TCATATATTTATGCATAAAC+AGG | + | chr4.2:38049438-38049457 | MS.gene003833:intron | 20.0% |
!! | TTAGTAGATGTTTGAATTAA+TGG | + | chr4.2:38051774-38051793 | MS.gene003833:intron | 20.0% |
!!! | AAATAGTTTTGAATCTTTCT+TGG | + | chr4.2:38052225-38052244 | MS.gene003833:CDS | 20.0% |
!!! | ACTAACTTTTTATTTCATCA+TGG | + | chr4.2:38052645-38052664 | MS.gene003833:intron | 20.0% |
!!! | ATGTTAGTCTTATTTTTCAA+TGG | - | chr4.2:38050109-38050128 | None:intergenic | 20.0% |
!!! | ATTTGTTGGATATATTGAAT+AGG | + | chr4.2:38048730-38048749 | MS.gene003833:intron | 20.0% |
!!! | GATGATTTTAAATCTTTATG+TGG | + | chr4.2:38052310-38052329 | MS.gene003833:CDS | 20.0% |
!!! | GTACTAAATTTGCTTATTTT+GGG | + | chr4.2:38048277-38048296 | MS.gene003833:intron | 20.0% |
!!! | TAGCAAAAAAATGCATATTT+TGG | - | chr4.2:38052718-38052737 | None:intergenic | 20.0% |
!!! | TCAATTTTCAAATGACATTT+AGG | - | chr4.2:38050855-38050874 | None:intergenic | 20.0% |
!!! | TGTACTAAATTTGCTTATTT+TGG | + | chr4.2:38048276-38048295 | MS.gene003833:intron | 20.0% |
!!! | TTCTAGATTAGTTATACAAT+AGG | - | chr4.2:38051023-38051042 | None:intergenic | 20.0% |
!!! | TTTTCGTTATTTATAAGTGT+GGG | + | chr4.2:38050332-38050351 | MS.gene003833:intron | 20.0% |
!!! | TTTTTCGTTATTTATAAGTG+TGG | + | chr4.2:38050331-38050350 | MS.gene003833:intron | 20.0% |
!!! | TTTTTTGAAAGAACATTTGT+TGG | + | chr4.2:38048716-38048735 | MS.gene003833:intron | 20.0% |
! | AAAATAGAAGAAATACATGC+TGG | + | chr4.2:38048622-38048641 | MS.gene003833:intron | 25.0% |
! | AAAATCTGTGGAAACAAAAA+AGG | - | chr4.2:38049714-38049733 | None:intergenic | 25.0% |
! | AAGAATTCAATTGAATTTGC+AGG | + | chr4.2:38048902-38048921 | MS.gene003833:intron | 25.0% |
! | AAGTTGGGATATCTAAATAA+TGG | + | chr4.2:38051055-38051074 | MS.gene003833:CDS | 25.0% |
! | AAGTTTATTGAGACTGATAA+AGG | - | chr4.2:38049369-38049388 | None:intergenic | 25.0% |
! | AATAGAATGAAACTTACAGA+AGG | - | chr4.2:38049534-38049553 | None:intergenic | 25.0% |
! | AATATCAGAAATTAAGCACA+TGG | - | chr4.2:38052417-38052436 | None:intergenic | 25.0% |
! | ACATGCTATGTACTATTTAT+AGG | + | chr4.2:38050445-38050464 | MS.gene003833:intron | 25.0% |
! | AGTCGAAATCAGTTATATAA+TGG | - | chr4.2:38051138-38051157 | None:intergenic | 25.0% |
! | ATAGTATAGTCTGTTAATAG+AGG | - | chr4.2:38049029-38049048 | None:intergenic | 25.0% |
! | ATCAGAAGGATCAATAAAAA+AGG | + | chr4.2:38050919-38050938 | MS.gene003833:CDS | 25.0% |
! | ATTCTTAATGGAAGATATTC+AGG | + | chr4.2:38050682-38050701 | MS.gene003833:CDS | 25.0% |
! | GCTCAGAACATTATTAAATA+AGG | - | chr4.2:38050821-38050840 | None:intergenic | 25.0% |
! | GTAAGTTTCATTCTATTTCA+TGG | + | chr4.2:38049537-38049556 | MS.gene003833:intron | 25.0% |
! | GTAGCATCAAATGATAATAA+TGG | - | chr4.2:38051488-38051507 | None:intergenic | 25.0% |
! | GTATAACACTTTATCTTTGT+AGG | + | chr4.2:38049157-38049176 | MS.gene003833:intron | 25.0% |
! | GTCGAAATCAGTTATATAAT+GGG | - | chr4.2:38051137-38051156 | None:intergenic | 25.0% |
! | TACTGTTGCAATACTTAATA+AGG | - | chr4.2:38049243-38049262 | None:intergenic | 25.0% |
! | TAGTAACAAAGAACATAGAA+AGG | - | chr4.2:38049779-38049798 | None:intergenic | 25.0% |
! | TCGAAATCAGTTATATAATG+GGG | - | chr4.2:38051136-38051155 | None:intergenic | 25.0% |
! | TGATAGATAAAACAAGCATT+GGG | + | chr4.2:38051202-38051221 | MS.gene003833:intron | 25.0% |
! | TTATTATCATTTGATGCTAC+AGG | + | chr4.2:38051488-38051507 | MS.gene003833:intron | 25.0% |
! | TTCTATGTTCTTTGTTACTA+AGG | + | chr4.2:38049779-38049798 | MS.gene003833:intron | 25.0% |
! | TTGAATCTTTGGTTAAATAG+AGG | + | chr4.2:38051340-38051359 | MS.gene003833:intron | 25.0% |
!! | TTGGTGAATTGATTCAAATT+TGG | + | chr4.2:38049265-38049284 | MS.gene003833:intron | 25.0% |
!! | TTGTATTGATCAACTATACA+AGG | + | chr4.2:38052811-38052830 | MS.gene003833:CDS | 25.0% |
!!! | AATCAGTTTTGTGTTGAATT+AGG | + | chr4.2:38048869-38048888 | MS.gene003833:intron | 25.0% |
!!! | ATGCTTTGAAAAATCATTAC+AGG | + | chr4.2:38051914-38051933 | MS.gene003833:intron | 25.0% |
!!! | ATTCAACACAAAACTGATTT+TGG | - | chr4.2:38048868-38048887 | None:intergenic | 25.0% |
AAAATCATTACAGGTGACAT+TGG | + | chr4.2:38051923-38051942 | MS.gene003833:intron | 30.0% | |
AACATCTTCAAATTGTCTCA+AGG | + | chr4.2:38051992-38052011 | MS.gene003833:CDS | 30.0% | |
AATCACCTATTTGATCACAA+TGG | - | chr4.2:38050021-38050040 | None:intergenic | 30.0% | |
ATGAAACAAGTGAATCATAG+AGG | - | chr4.2:38050269-38050288 | None:intergenic | 30.0% | |
ATGAACCATTGTGATCAAAT+AGG | + | chr4.2:38050013-38050032 | MS.gene003833:intron | 30.0% | |
ATTATTGAGTGCATATGTGA+AGG | + | chr4.2:38048011-38048030 | MS.gene003833:intron | 30.0% | |
CAAAAAAGCGGAAAGATATA+AGG | - | chr4.2:38051814-38051833 | None:intergenic | 30.0% | |
CAAATCGAAAGATTAACAGA+TGG | - | chr4.2:38047984-38048003 | None:intergenic | 30.0% | |
CAACACAAAAAATTCCATGA+AGG | - | chr4.2:38050644-38050663 | None:intergenic | 30.0% | |
CAATACAATCCTGAAATTGT+TGG | - | chr4.2:38052799-38052818 | None:intergenic | 30.0% | |
CTGATAGATAAAACAAGCAT+TGG | + | chr4.2:38051201-38051220 | MS.gene003833:intron | 30.0% | |
GGTGTACAAATCTTAAAAGT+AGG | + | chr4.2:38049748-38049767 | MS.gene003833:intron | 30.0% | |
TACAACAAGATTATAGCAGT+AGG | - | chr4.2:38050794-38050813 | None:intergenic | 30.0% | |
TACTGTTGTGTTACATTTGT+TGG | + | chr4.2:38048683-38048702 | MS.gene003833:intron | 30.0% | |
TAGTGTTTCTTGTATCACAA+GGG | + | chr4.2:38049079-38049098 | MS.gene003833:intron | 30.0% | |
TATTGAGACTGATAAAGGAA+AGG | - | chr4.2:38049364-38049383 | None:intergenic | 30.0% | |
TCATATGTGATCCATTCATA+GGG | - | chr4.2:38048933-38048952 | None:intergenic | 30.0% | |
TCATGTATATGACCAGATAA+TGG | + | chr4.2:38050508-38050527 | MS.gene003833:CDS | 30.0% | |
TTAGAGAGAGAACAAAAAAG+CGG | - | chr4.2:38051826-38051845 | None:intergenic | 30.0% | |
TTCATATGTGATCCATTCAT+AGG | - | chr4.2:38048934-38048953 | None:intergenic | 30.0% | |
! | ATCGAATGTGTTTTCTATGA+TGG | + | chr4.2:38051547-38051566 | MS.gene003833:CDS | 30.0% |
! | CATTAGAAAACTGATTTCAG+TGG | - | chr4.2:38047847-38047866 | None:intergenic | 30.0% |
! | GGTTAGTTACCATTAAAAGA+TGG | - | chr4.2:38049815-38049834 | None:intergenic | 30.0% |
! | TAAGTATTGCAACAGTACTT+TGG | + | chr4.2:38049246-38049265 | MS.gene003833:intron | 30.0% |
! | TCGAATGTGTTTTCTATGAT+GGG | + | chr4.2:38051548-38051567 | MS.gene003833:CDS | 30.0% |
! | TTCTCATTTTCAATCTCCAT+GGG | + | chr4.2:38047730-38047749 | MS.gene003833:CDS | 30.0% |
! | TTTTCTGTCGATGATTTTCA+TGG | - | chr4.2:38051969-38051988 | None:intergenic | 30.0% |
!! | GATTAGCTATTGTGAGTTTT+GGG | + | chr4.2:38049857-38049876 | MS.gene003833:intron | 30.0% |
!! | TCGATTGTTTTATATCAGTG+TGG | + | chr4.2:38051363-38051382 | MS.gene003833:intron | 30.0% |
!! | TGATTAGCTATTGTGAGTTT+TGG | + | chr4.2:38049856-38049875 | MS.gene003833:intron | 30.0% |
!!! | CTGAAACCAACTATTTTTTG+TGG | + | chr4.2:38050707-38050726 | MS.gene003833:CDS | 30.0% |
!!! | GTTTCACTTTTTTATTCTCG+AGG | + | chr4.2:38051430-38051449 | MS.gene003833:intron | 30.0% |
!!! | TAGTTTTGAATCTTTCTTGG+TGG | + | chr4.2:38052228-38052247 | MS.gene003833:CDS | 30.0% |
!!! | TGTGAAGGTTTTGATTTTGT+TGG | + | chr4.2:38048026-38048045 | MS.gene003833:intron | 30.0% |
!!! | TTTTTTGTGTTGATTCTTGC+AGG | + | chr4.2:38050652-38050671 | MS.gene003833:intron | 30.0% |
AAACATACCGAAGCTATAAG+AGG | - | chr4.2:38052064-38052083 | None:intergenic | 35.0% | |
AACACAAGCCTATCAAAGAA+AGG | - | chr4.2:38051103-38051122 | None:intergenic | 35.0% | |
AACATACCGAAGCTATAAGA+GGG | - | chr4.2:38052063-38052082 | None:intergenic | 35.0% | |
AAGAAAGAAGTTGAGGAACT+TGG | + | chr4.2:38049898-38049917 | MS.gene003833:CDS | 35.0% | |
AAGGTTTGTCTCTTATTCTC+TGG | + | chr4.2:38052606-38052625 | MS.gene003833:intron | 35.0% | |
AATAGAGGAAGAACAGTTAC+AGG | - | chr4.2:38049014-38049033 | None:intergenic | 35.0% | |
ACAATAATGAAGAGCCAGAA+TGG | - | chr4.2:38049576-38049595 | None:intergenic | 35.0% | |
ACATCTACTAAGACAACATG+AGG | - | chr4.2:38051765-38051784 | None:intergenic | 35.0% | |
ACTGTTGTAGCATGATGATT+TGG | + | chr4.2:38051408-38051427 | MS.gene003833:intron | 35.0% | |
AGATCTTACTGAAGAGGTTA+TGG | + | chr4.2:38051712-38051731 | MS.gene003833:CDS | 35.0% | |
AGATGCATCTATGCTAAAGA+TGG | + | chr4.2:38047692-38047711 | MS.gene003833:CDS | 35.0% | |
AGCATAGATGCATCTATACA+CGG | - | chr4.2:38047687-38047706 | None:intergenic | 35.0% | |
AGGTACAAAAACACAAACCT+AGG | - | chr4.2:38049344-38049363 | None:intergenic | 35.0% | |
ATCAGAAATTAAGCACATGG+TGG | - | chr4.2:38052414-38052433 | None:intergenic | 35.0% | |
ATGATAAACTCCACAGCATT+AGG | - | chr4.2:38049465-38049484 | None:intergenic | 35.0% | |
ATGCTATAGAAACTTCAGCA+TGG | - | chr4.2:38049491-38049510 | None:intergenic | 35.0% | |
ATGCTTTCTCTAACAGACAA+AGG | + | chr4.2:38050226-38050245 | MS.gene003833:CDS | 35.0% | |
ATGGATCTAATTGTCCTGAA+TGG | + | chr4.2:38049119-38049138 | MS.gene003833:CDS | 35.0% | |
ATTCAATTGAATTTGCAGGC+TGG | + | chr4.2:38048906-38048925 | MS.gene003833:intron | 35.0% | |
CAACTATACAAGGAAGCAAA+GGG | + | chr4.2:38052821-38052840 | MS.gene003833:CDS | 35.0% | |
CACACAAAAGAAAGAAGTTG+AGG | + | chr4.2:38049891-38049910 | MS.gene003833:CDS | 35.0% | |
CATGGAGATTGAAAATGAGA+AGG | - | chr4.2:38047731-38047750 | None:intergenic | 35.0% | |
CTAGTGTTTCTTGTATCACA+AGG | + | chr4.2:38049078-38049097 | MS.gene003833:intron | 35.0% | |
GCAGGATATCAGATTCTTAA+TGG | + | chr4.2:38050670-38050689 | MS.gene003833:intron | 35.0% | |
GCTCTTCATTATTGTTTCCT+TGG | + | chr4.2:38049581-38049600 | MS.gene003833:intron | 35.0% | |
GGAACACCACAAAAAATAGT+TGG | - | chr4.2:38050716-38050735 | None:intergenic | 35.0% | |
GGTACAAAAACACAAACCTA+GGG | - | chr4.2:38049343-38049362 | None:intergenic | 35.0% | |
GGTCTCTTCAATTTGAATGT+TGG | - | chr4.2:38052567-38052586 | None:intergenic | 35.0% | |
TAACATAAGATTGTGCTCCA+AGG | - | chr4.2:38049601-38049620 | None:intergenic | 35.0% | |
TAGATCCATATATGCCACAA+CGG | - | chr4.2:38049108-38049127 | None:intergenic | 35.0% | |
TCAACTATACAAGGAAGCAA+AGG | + | chr4.2:38052820-38052839 | MS.gene003833:CDS | 35.0% | |
TCAAGACATGACAAAATCTG+TGG | - | chr4.2:38049726-38049745 | None:intergenic | 35.0% | |
TCCATTGCAATTATCCATTC+AGG | - | chr4.2:38049136-38049155 | None:intergenic | 35.0% | |
TCCTGAATGGATAATTGCAA+TGG | + | chr4.2:38049132-38049151 | MS.gene003833:CDS | 35.0% | |
TGAATGGATAATTGCAATGG+AGG | + | chr4.2:38049135-38049154 | MS.gene003833:CDS | 35.0% | |
TGAATGGATCACATATGAAG+AGG | + | chr4.2:38048935-38048954 | MS.gene003833:CDS | 35.0% | |
TGCTTTCTCTAACAGACAAA+GGG | + | chr4.2:38050227-38050246 | MS.gene003833:CDS | 35.0% | |
TTATCATGTAGCCACTTCAA+TGG | - | chr4.2:38051464-38051483 | None:intergenic | 35.0% | |
TTGGATGAACTCAACATCAT+TGG | + | chr4.2:38052358-38052377 | MS.gene003833:CDS | 35.0% | |
! | AGATTTTGTCATGTCTTGAG+CGG | + | chr4.2:38049727-38049746 | MS.gene003833:intron | 35.0% |
! | ATGATTTTCATGGCTCCATT+TGG | - | chr4.2:38051959-38051978 | None:intergenic | 35.0% |
! | CTATGCTAAAGATGGTTTGT+TGG | + | chr4.2:38047700-38047719 | MS.gene003833:CDS | 35.0% |
! | CTCAACTTCTTTCTTTTGTG+TGG | - | chr4.2:38049893-38049912 | None:intergenic | 35.0% |
! | CTTCTCATTTTCAATCTCCA+TGG | + | chr4.2:38047729-38047748 | MS.gene003833:CDS | 35.0% |
! | GCGGAAAAAAACTGATTCAA+AGG | + | chr4.2:38048103-38048122 | MS.gene003833:CDS | 35.0% |
! | TGTAGTTTGCCTATAAATGC+CGG | + | chr4.2:38051881-38051900 | MS.gene003833:intron | 35.0% |
! | TTCTTAATAACGACGCCTTT+TGG | - | chr4.2:38050169-38050188 | None:intergenic | 35.0% |
! | TTGGTAGGAACTCTGATTTT+CGG | + | chr4.2:38049955-38049974 | MS.gene003833:intron | 35.0% |
! | TTTTGACACAAACAAGCTCA+AGG | + | chr4.2:38048582-38048601 | MS.gene003833:intron | 35.0% |
!! | ATGCTTTTAGAGAAAGAGAC+AGG | - | chr4.2:38050619-38050638 | None:intergenic | 35.0% |
!! | CAACACAAAACTGATTTTGG+TGG | - | chr4.2:38048865-38048884 | None:intergenic | 35.0% |
!! | CTCTAAAAGCATTTCCTTCA+TGG | + | chr4.2:38050627-38050646 | MS.gene003833:intron | 35.0% |
!! | CTTGTTTCTGAATTTCTCCA+GGG | + | chr4.2:38050064-38050083 | MS.gene003833:intron | 35.0% |
!! | GAGTTTATGAGGGTTACTTT+TGG | + | chr4.2:38051280-38051299 | MS.gene003833:CDS | 35.0% |
!! | GATTCAAATTTGGTGTTTGC+AGG | + | chr4.2:38049275-38049294 | MS.gene003833:intron | 35.0% |
!! | GTTTGATTTTCTCAGCTTAG+AGG | + | chr4.2:38052474-38052493 | MS.gene003833:intron | 35.0% |
!! | TAAGCTTAACTTGCACTTGA+AGG | + | chr4.2:38050878-38050897 | MS.gene003833:intron | 35.0% |
!! | TAGATAAAACAAGCATTGGG+TGG | + | chr4.2:38051205-38051224 | MS.gene003833:intron | 35.0% |
!! | TCTTGTTTCTGAATTTCTCC+AGG | + | chr4.2:38050063-38050082 | MS.gene003833:intron | 35.0% |
!! | TGTCTGTTAGAGAAAGCATT+TGG | - | chr4.2:38050225-38050244 | None:intergenic | 35.0% |
!! | TGTGTTTTCTATGATGGGAA+CGG | + | chr4.2:38051553-38051572 | MS.gene003833:CDS | 35.0% |
!! | TTTCATGTCTGAAGTGTTGT+CGG | + | chr4.2:38050195-38050214 | MS.gene003833:CDS | 35.0% |
!!! | ATTTTGTTGGTTCTTTGTGC+AGG | + | chr4.2:38048039-38048058 | MS.gene003833:intron | 35.0% |
!!! | TTTATTTTGCGCGCAGATTT+GGG | + | chr4.2:38052195-38052214 | MS.gene003833:intron | 35.0% |
!!! | TTTCAGTGGAGCTTTTTTGA+AGG | - | chr4.2:38047833-38047852 | None:intergenic | 35.0% |
!!! | TTTTATTTTGCGCGCAGATT+TGG | + | chr4.2:38052194-38052213 | MS.gene003833:intron | 35.0% |
!!! | TTTTGTTGGTTCTTTGTGCA+GGG | + | chr4.2:38048040-38048059 | MS.gene003833:intron | 35.0% |
AAGCAGCACCTTTCTTTGAT+AGG | + | chr4.2:38051092-38051111 | MS.gene003833:CDS | 40.0% | |
ACTGAAGAGGTTATGGTTGA+TGG | + | chr4.2:38051719-38051738 | MS.gene003833:CDS | 40.0% | |
AGAATGCTTTGACAGCAAGT+TGG | + | chr4.2:38051039-38051058 | MS.gene003833:intron | 40.0% | |
AGATCTCTCTCCACATCAAA+GGG | - | chr4.2:38052537-38052556 | None:intergenic | 40.0% | |
AGTCATGAAAAACCATCAGC+AGG | + | chr4.2:38047659-38047678 | MS.gene003833:CDS | 40.0% | |
ATAAACAGGTCCTAATGCTG+TGG | + | chr4.2:38049452-38049471 | MS.gene003833:intron | 40.0% | |
ATACCATATCCTTGTGCCAA+AGG | - | chr4.2:38051310-38051329 | None:intergenic | 40.0% | |
ATGGGAAGAGTTTCTTCAGT+TGG | + | chr4.2:38049936-38049955 | MS.gene003833:CDS | 40.0% | |
ATGTACACAAGTGGAACTAC+TGG | + | chr4.2:38050139-38050158 | MS.gene003833:CDS | 40.0% | |
CGAGTTCGAATGTTGTTATC+AGG | + | chr4.2:38051229-38051248 | MS.gene003833:CDS | 40.0% | |
CTAAAACACCCGGCATTTAT+AGG | - | chr4.2:38051893-38051912 | None:intergenic | 40.0% | |
CTCTAACCAACTGAGCTAAT+GGG | + | chr4.2:38047958-38047977 | MS.gene003833:intron | 40.0% | |
GAAGAGTTTCTTCAGTTGGT+AGG | + | chr4.2:38049940-38049959 | MS.gene003833:intron | 40.0% | |
GAATGCTTTGACAGCAAGTT+GGG | + | chr4.2:38051040-38051059 | MS.gene003833:intron | 40.0% | |
GCACGTAGAAGAGTTTATGA+GGG | + | chr4.2:38051270-38051289 | MS.gene003833:CDS | 40.0% | |
GCATAGATGCATCTATACAC+GGG | - | chr4.2:38047686-38047705 | None:intergenic | 40.0% | |
GCTTTCTCTAACAGACAAAG+GGG | + | chr4.2:38050228-38050247 | MS.gene003833:CDS | 40.0% | |
GGATGTATACACTGTGAAAG+TGG | + | chr4.2:38047619-38047638 | MS.gene003833:CDS | 40.0% | |
TAAACACGATCGTAAACTCG+AGG | - | chr4.2:38050737-38050756 | None:intergenic | 40.0% | |
TAGATCTCTCTCCACATCAA+AGG | - | chr4.2:38052538-38052557 | None:intergenic | 40.0% | |
TGAATTTCTCCAGGGAAATC+TGG | + | chr4.2:38050072-38050091 | MS.gene003833:intron | 40.0% | |
TGATAGGCTTGTGTTTGACA+AGG | + | chr4.2:38051108-38051127 | MS.gene003833:CDS | 40.0% | |
TGCACAATCATGTACACAAG+TGG | + | chr4.2:38050130-38050149 | MS.gene003833:CDS | 40.0% | |
TGGTCATATACATGAGCAAG+AGG | - | chr4.2:38050503-38050522 | None:intergenic | 40.0% | |
TGTCACAGAAGAGAGTTCAA+TGG | - | chr4.2:38050980-38050999 | None:intergenic | 40.0% | |
TTAAAAAATGTGGCCCATGC+AGG | + | chr4.2:38047899-38047918 | MS.gene003833:intron | 40.0% | |
TTACAGGTGACATTGGAGAA+TGG | + | chr4.2:38051930-38051949 | MS.gene003833:intron | 40.0% | |
TTGTAGTGCTTTAGCAACTG+TGG | - | chr4.2:38052588-38052607 | None:intergenic | 40.0% | |
! | AAACCTAGGGTGTCATATAG+TGG | - | chr4.2:38049330-38049349 | None:intergenic | 40.0% |
! | ACAGTTGCTAAAGCACTACA+AGG | + | chr4.2:38052587-38052606 | MS.gene003833:CDS | 40.0% |
! | AGAGAAGTACACATCGTCTT+CGG | - | chr4.2:38050474-38050493 | None:intergenic | 40.0% |
! | AGGAGTGTATTCCATTGAAG+TGG | + | chr4.2:38051450-38051469 | MS.gene003833:intron | 40.0% |
! | GAGCACAATCTTTTCCATTC+TGG | + | chr4.2:38049559-38049578 | MS.gene003833:intron | 40.0% |
! | GTAGTTTGCCTATAAATGCC+GGG | + | chr4.2:38051882-38051901 | MS.gene003833:intron | 40.0% |
! | TAGGAACTCTGATTTTCGGT+TGG | + | chr4.2:38049959-38049978 | MS.gene003833:intron | 40.0% |
! | TTTTCCTCGCCAACAATTTC+AGG | + | chr4.2:38052787-38052806 | MS.gene003833:intron | 40.0% |
!! | AAGAGGTTATGGTTGATGGT+TGG | + | chr4.2:38051723-38051742 | MS.gene003833:CDS | 40.0% |
!! | AATCTCCATGGGACTTTTTC+AGG | + | chr4.2:38047741-38047760 | MS.gene003833:CDS | 40.0% |
!! | CACAAAACTGATTTTGGTGG+TGG | - | chr4.2:38048862-38048881 | None:intergenic | 40.0% |
!! | GATGGTTTTTCATGACTTGC+TGG | - | chr4.2:38047656-38047675 | None:intergenic | 40.0% |
!! | GTTGATGGTTGGTTTCATAC+AGG | + | chr4.2:38051734-38051753 | MS.gene003833:CDS | 40.0% |
!! | TTTTCTATGATGGGAACGGT+TGG | + | chr4.2:38051557-38051576 | MS.gene003833:CDS | 40.0% |
!!! | AAAACTGATTTTGGTGGTGG+TGG | - | chr4.2:38048859-38048878 | None:intergenic | 40.0% |
!!! | GGTTACTTTTGGATCTCCTT+TGG | + | chr4.2:38051291-38051310 | MS.gene003833:CDS | 40.0% |
AAACTCTTCCCATGAGAAGC+AGG | - | chr4.2:38049929-38049948 | None:intergenic | 45.0% | |
AATTTCTCCACGTGGTTGAC+TGG | - | chr4.2:38051648-38051667 | None:intergenic | 45.0% | |
AGAGGGAATACCTTGTTCTC+CGG | + | chr4.2:38051674-38051693 | MS.gene003833:CDS | 45.0% | |
AGGTCTCACCGAATGTTGTT+CGG | + | chr4.2:38051508-38051527 | MS.gene003833:intron | 45.0% | |
AGTGACCTGAAAAAGTCCCA+TGG | - | chr4.2:38047749-38047768 | None:intergenic | 45.0% | |
AGTGCATCATATCCCATCTC+CGG | - | chr4.2:38051623-38051642 | None:intergenic | 45.0% | |
AGTTGTGATCCCTGAAAGAC+AGG | + | chr4.2:38052252-38052271 | MS.gene003833:CDS | 45.0% | |
ATCTTGACGCTTGTGGTAAC+CGG | - | chr4.2:38051696-38051715 | None:intergenic | 45.0% | |
ATTGGAGAATGGCTGCCAAA+TGG | + | chr4.2:38051941-38051960 | MS.gene003833:CDS | 45.0% | |
CAATCCTGAAATTGTTGGCG+AGG | - | chr4.2:38052794-38052813 | None:intergenic | 45.0% | |
CAGTAAGATCTTGACGCTTG+TGG | - | chr4.2:38051703-38051722 | None:intergenic | 45.0% | |
CTCTCCACATCAAAGGGAAT+TGG | - | chr4.2:38052531-38052550 | None:intergenic | 45.0% | |
CTTGCTTCAATGGCTGTCAT+GGG | - | chr4.2:38051587-38051606 | None:intergenic | 45.0% | |
GATCCAAATCCAGATTTCCC+TGG | - | chr4.2:38050084-38050103 | None:intergenic | 45.0% | |
GCCTTGCCAAAATCCAATTG+AGG | - | chr4.2:38050558-38050577 | None:intergenic | 45.0% | |
GCGTCAAGATCTTACTGAAG+AGG | + | chr4.2:38051706-38051725 | MS.gene003833:CDS | 45.0% | |
GCTCTAACCAACTGAGCTAA+TGG | + | chr4.2:38047957-38047976 | MS.gene003833:intron | 45.0% | |
GCTGGTAAAAGCAGTTCATC+TGG | + | chr4.2:38052503-38052522 | MS.gene003833:CDS | 45.0% | |
GGAACCAATTCCCTTTGATG+TGG | + | chr4.2:38052524-38052543 | MS.gene003833:CDS | 45.0% | |
GGAACTACTGGTGAACCAAA+AGG | + | chr4.2:38050151-38050170 | MS.gene003833:CDS | 45.0% | |
GGATTCAAGCCTTGCTTCAA+TGG | - | chr4.2:38051597-38051616 | None:intergenic | 45.0% | |
GGCACGTAGAAGAGTTTATG+AGG | + | chr4.2:38051269-38051288 | MS.gene003833:CDS | 45.0% | |
GTGGAGAAATTTGCCTGAGA+GGG | + | chr4.2:38051657-38051676 | MS.gene003833:CDS | 45.0% | |
GTTTACGATCGTGTTTACGC+TGG | + | chr4.2:38050740-38050759 | MS.gene003833:CDS | 45.0% | |
TCTCCAGGGAAATCTGGATT+TGG | + | chr4.2:38050078-38050097 | MS.gene003833:intron | 45.0% | |
TCTCCTTTGGCACAAGGATA+TGG | + | chr4.2:38051304-38051323 | MS.gene003833:CDS | 45.0% | |
TCTTCTACGTGCCTAGACAA+AGG | - | chr4.2:38051262-38051281 | None:intergenic | 45.0% | |
TGGAATAGGTCGCCATTATC+TGG | - | chr4.2:38050523-38050542 | None:intergenic | 45.0% | |
TTTGGATCTCCTTTGGCACA+AGG | + | chr4.2:38051298-38051317 | MS.gene003833:CDS | 45.0% | |
! | AGAACAAGGTATTCCCTCTC+AGG | - | chr4.2:38051673-38051692 | None:intergenic | 45.0% |
! | TTTTGGCAAGGCGTAAGCTT+TGG | + | chr4.2:38050566-38050585 | MS.gene003833:intron | 45.0% |
!! | AAAGGTGCTGCTTTGTCTTG+TGG | - | chr4.2:38051085-38051104 | None:intergenic | 45.0% |
!! | GCCTCAATTGGATTTTGGCA+AGG | + | chr4.2:38050554-38050573 | MS.gene003833:CDS | 45.0% |
!!! | TCAGCTTAGAGGTTTTGAGC+TGG | + | chr4.2:38052485-38052504 | MS.gene003833:intron | 45.0% |
!!! | TAAATTAATTTACTATTTTT+TGG | - | chr4.2:38048354-38048373 | None:intergenic | 5.0% |
AGATGGCCCATTAGCTCAGT+TGG | - | chr4.2:38047967-38047986 | None:intergenic | 50.0% | |
ATCATATCCCATCTCCGGCA+CGG | - | chr4.2:38051618-38051637 | None:intergenic | 50.0% | |
CAAGGAAGCAAAGGGAGCAA+TGG | + | chr4.2:38052829-38052848 | MS.gene003833:CDS | 50.0% | |
CCATGACAGCCATTGAAGCA+AGG | + | chr4.2:38051585-38051604 | MS.gene003833:CDS | 50.0% | |
CCTTGCTTCAATGGCTGTCA+TGG | - | chr4.2:38051588-38051607 | None:intergenic | 50.0% | |
CGATCGTGTTTACGCTGGTA+AGG | + | chr4.2:38050745-38050764 | MS.gene003833:intron | 50.0% | |
CGTGGAGAAATTTGCCTGAG+AGG | + | chr4.2:38051656-38051675 | MS.gene003833:CDS | 50.0% | |
CTCAGGCAAATTTCTCCACG+TGG | - | chr4.2:38051656-38051675 | None:intergenic | 50.0% | |
CTTGTGGTAACCGGAGAACA+AGG | - | chr4.2:38051687-38051706 | None:intergenic | 50.0% | |
GCAGTGCCCTCTTATAGCTT+CGG | + | chr4.2:38052054-38052073 | MS.gene003833:CDS | 50.0% | |
GCGACCTATTCCATCTACAG+GGG | + | chr4.2:38050530-38050549 | MS.gene003833:CDS | 50.0% | |
GCTCCACTATATGACACCCT+AGG | + | chr4.2:38049324-38049343 | MS.gene003833:CDS | 50.0% | |
GGCGACCTATTCCATCTACA+GGG | + | chr4.2:38050529-38050548 | MS.gene003833:CDS | 50.0% | |
GGTCTCACCGAATGTTGTTC+GGG | + | chr4.2:38051509-38051528 | MS.gene003833:intron | 50.0% | |
GGTGACCGTTGTGGCATATA+TGG | + | chr4.2:38049100-38049119 | MS.gene003833:CDS | 50.0% | |
GTCTCACCGAATGTTGTTCG+GGG | + | chr4.2:38051510-38051529 | MS.gene003833:CDS | 50.0% | |
TATCACAAGGGTGACCGTTG+TGG | + | chr4.2:38049091-38049110 | MS.gene003833:intron | 50.0% | |
TATGATGCTGCCGTCCGAAT+TGG | + | chr4.2:38048960-38048979 | MS.gene003833:CDS | 50.0% | |
TGCCCTAGCAAACCAATGCT+GGG | + | chr4.2:38048077-38048096 | MS.gene003833:CDS | 50.0% | |
TGGCGACCTATTCCATCTAC+AGG | + | chr4.2:38050528-38050547 | MS.gene003833:CDS | 50.0% | |
TGGTGCATCCTGCTTCTCAT+GGG | + | chr4.2:38049918-38049937 | MS.gene003833:CDS | 50.0% | |
TTGGTGCATCCTGCTTCTCA+TGG | + | chr4.2:38049917-38049936 | MS.gene003833:CDS | 50.0% | |
! | GAAGCACCCCGAACAACATT+CGG | - | chr4.2:38051519-38051538 | None:intergenic | 50.0% |
! | TCCTCATGGCGGAACCAATT+CGG | - | chr4.2:38048977-38048996 | None:intergenic | 50.0% |
! | TTTTTCCGCTGACCCAGCAT+TGG | - | chr4.2:38048092-38048111 | None:intergenic | 50.0% |
!! | GACCCAGCATTGGTTTGCTA+GGG | - | chr4.2:38048082-38048101 | None:intergenic | 50.0% |
!! | TGACCCAGCATTGGTTTGCT+AGG | - | chr4.2:38048083-38048102 | None:intergenic | 50.0% |
!!! | ACTGATTTTGGTGGTGGTGG+TGG | - | chr4.2:38048856-38048875 | None:intergenic | 50.0% |
!!! | CTGATTTTGGTGGTGGTGGT+GGG | - | chr4.2:38048855-38048874 | None:intergenic | 50.0% |
!!! | TGATTTTGGTGGTGGTGGTG+GGG | - | chr4.2:38048854-38048873 | None:intergenic | 50.0% |
AAAGACAGGCCCTCGAGGAT+TGG | + | chr4.2:38052266-38052285 | MS.gene003833:CDS | 55.0% | |
AAGACAGGCCCTCGAGGATT+GGG | + | chr4.2:38052267-38052286 | MS.gene003833:CDS | 55.0% | |
AGCAAGGCTTGAATCCGTGC+CGG | + | chr4.2:38051601-38051620 | MS.gene003833:CDS | 55.0% | |
ATTGACACCACGCCTCCTCA+TGG | - | chr4.2:38048991-38049010 | None:intergenic | 55.0% | |
CAGGAGCTGCTCCTTTGTCT+AGG | + | chr4.2:38051248-38051267 | MS.gene003833:CDS | 55.0% | |
CGCAGGTTCGAAACCTGCAT+GGG | - | chr4.2:38047915-38047934 | None:intergenic | 55.0% | |
CTATACACGGGACCTGCTGA+TGG | - | chr4.2:38047674-38047693 | None:intergenic | 55.0% | |
CTTCACTGCCCAATCCTCGA+GGG | - | chr4.2:38052278-38052297 | None:intergenic | 55.0% | |
CTTGAATCCGTGCCGGAGAT+GGG | + | chr4.2:38051608-38051627 | MS.gene003833:CDS | 55.0% | |
GCAAACCAATGCTGGGTCAG+CGG | + | chr4.2:38048084-38048103 | MS.gene003833:CDS | 55.0% | |
GCGTCGTGCTAATAACGCGA+AGG | - | chr4.2:38047939-38047958 | None:intergenic | 55.0% | |
GCTAATAACGCGAAGGTCGC+AGG | - | chr4.2:38047932-38047951 | None:intergenic | 55.0% | |
GTGCCCTAGCAAACCAATGC+TGG | + | chr4.2:38048076-38048095 | MS.gene003833:CDS | 55.0% | |
TCGCAGGTTCGAAACCTGCA+TGG | - | chr4.2:38047916-38047935 | None:intergenic | 55.0% | |
TGCGCGCAGATTTGGGTCTA+TGG | + | chr4.2:38052202-38052221 | MS.gene003833:intron | 55.0% | |
! | AATTGAGGCGCCCCTGTAGA+TGG | - | chr4.2:38050543-38050562 | None:intergenic | 55.0% |
! | CATGGCGGAACCAATTCGGA+CGG | - | chr4.2:38048973-38048992 | None:intergenic | 55.0% |
! | GAATTGGTTCCGCCATGAGG+AGG | + | chr4.2:38048976-38048995 | MS.gene003833:CDS | 55.0% |
! | TCCGAATTGGTTCCGCCATG+AGG | + | chr4.2:38048973-38048992 | MS.gene003833:CDS | 55.0% |
! | TGCAGGCTGGTCCCTATGAA+TGG | + | chr4.2:38048919-38048938 | MS.gene003833:intron | 55.0% |
!! | ATCTACAGGGGCGCCTCAAT+TGG | + | chr4.2:38050542-38050561 | MS.gene003833:CDS | 55.0% |
!! | GGGGCGCCTCAATTGGATTT+TGG | + | chr4.2:38050549-38050568 | MS.gene003833:CDS | 55.0% |
CCTCGAGGGCCTGTCTTTCA+GGG | - | chr4.2:38052264-38052283 | None:intergenic | 60.0% | |
GCACTCTCCAGTCAACCACG+TGG | + | chr4.2:38051638-38051657 | MS.gene003833:CDS | 60.0% | |
GCTTCACTGCCCAATCCTCG+AGG | - | chr4.2:38052279-38052298 | None:intergenic | 60.0% | |
GCTTGAATCCGTGCCGGAGA+TGG | + | chr4.2:38051607-38051626 | MS.gene003833:CDS | 60.0% | |
GGCGCCCCTGTAGATGGAAT+AGG | - | chr4.2:38050537-38050556 | None:intergenic | 60.0% | |
TCCTCGAGGGCCTGTCTTTC+AGG | - | chr4.2:38052265-38052284 | None:intergenic | 60.0% | |
TGTGCAGGGACTCTGCAGCA+AGG | + | chr4.2:38048054-38048073 | MS.gene003833:intron | 60.0% | |
! | TGGTGGGGTGGGGGGTATAT+GGG | - | chr4.2:38048839-38048858 | None:intergenic | 60.0% |
!! | TTTGGTGGTGGTGGTGGGGT+GGG | - | chr4.2:38048850-38048869 | None:intergenic | 60.0% |
!!! | TTTTGGTGGTGGTGGTGGGG+TGG | - | chr4.2:38048851-38048870 | None:intergenic | 60.0% |
CCCTGAAAGACAGGCCCTCG+AGG | + | chr4.2:38052261-38052280 | MS.gene003833:CDS | 65.0% | |
GACACCACGCCTCCTCATGG+CGG | - | chr4.2:38048988-38049007 | None:intergenic | 65.0% | |
! | GTGGTGGGGTGGGGGGTATA+TGG | - | chr4.2:38048840-38048859 | None:intergenic | 65.0% |
!! | TTGGTGGTGGTGGTGGGGTG+GGG | - | chr4.2:38048849-38048868 | None:intergenic | 65.0% |
GGTTCCGCCATGAGGAGGCG+TGG | + | chr4.2:38048981-38049000 | MS.gene003833:CDS | 70.0% | |
!! | TGGTGGTGGTGGTGGGGTGG+GGG | - | chr4.2:38048848-38048867 | None:intergenic | 70.0% |
!! | GGTGGTGGTGGTGGGGTGGG+GGG | - | chr4.2:38048847-38048866 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 38047614 | 38052856 | 38047614 | ID=MS.gene003833 |
chr4.2 | mRNA | 38047614 | 38052856 | 38047614 | ID=MS.gene003833.t1;Parent=MS.gene003833 |
chr4.2 | exon | 38047614 | 38047762 | 38047614 | ID=MS.gene003833.t1.exon1;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38047614 | 38047762 | 38047614 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38048061 | 38048124 | 38048061 | ID=MS.gene003833.t1.exon2;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38048061 | 38048124 | 38048061 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38048924 | 38049013 | 38048924 | ID=MS.gene003833.t1.exon3;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38048924 | 38049013 | 38048924 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38049100 | 38049156 | 38049100 | ID=MS.gene003833.t1.exon4;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38049100 | 38049156 | 38049100 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38049297 | 38049345 | 38049297 | ID=MS.gene003833.t1.exon5;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38049297 | 38049345 | 38049297 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38049460 | 38049536 | 38049460 | ID=MS.gene003833.t1.exon6;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38049460 | 38049536 | 38049460 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38049729 | 38049765 | 38049729 | ID=MS.gene003833.t1.exon7;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38049729 | 38049765 | 38049729 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38049863 | 38049957 | 38049863 | ID=MS.gene003833.t1.exon8;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38049863 | 38049957 | 38049863 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38050085 | 38050249 | 38050085 | ID=MS.gene003833.t1.exon9;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38050085 | 38050249 | 38050085 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38050467 | 38050577 | 38050467 | ID=MS.gene003833.t1.exon10;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38050467 | 38050577 | 38050467 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38050674 | 38050761 | 38050674 | ID=MS.gene003833.t1.exon11;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38050674 | 38050761 | 38050674 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38050900 | 38050966 | 38050900 | ID=MS.gene003833.t1.exon12;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38050900 | 38050966 | 38050900 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38051054 | 38051129 | 38051054 | ID=MS.gene003833.t1.exon13;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38051054 | 38051129 | 38051054 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38051208 | 38051325 | 38051208 | ID=MS.gene003833.t1.exon14;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38051208 | 38051325 | 38051208 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38051510 | 38051755 | 38051510 | ID=MS.gene003833.t1.exon15;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38051510 | 38051755 | 38051510 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38051936 | 38052075 | 38051936 | ID=MS.gene003833.t1.exon16;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38051936 | 38052075 | 38051936 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38052211 | 38052393 | 38052211 | ID=MS.gene003833.t1.exon17;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38052211 | 38052393 | 38052211 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38052489 | 38052608 | 38052489 | ID=MS.gene003833.t1.exon18;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38052489 | 38052608 | 38052489 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
chr4.2 | exon | 38052809 | 38052856 | 38052809 | ID=MS.gene003833.t1.exon19;Parent=MS.gene003833.t1 |
chr4.2 | CDS | 38052809 | 38052856 | 38052809 | ID=cds.MS.gene003833.t1;Parent=MS.gene003833.t1 |
Gene Sequence |
Protein sequence |