Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63009.t1 | XP_003589582.1 | 98.1 | 697 | 12 | 1 | 1 | 697 | 1 | 696 | 0.00E+00 | 1371.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63009.t1 | Q9CAP8 | 72.2 | 697 | 187 | 4 | 1 | 696 | 1 | 691 | 1.1e-300 | 1033.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63009.t1 | G7I8F2 | 98.1 | 697 | 12 | 1 | 1 | 697 | 1 | 696 | 0.0e+00 | 1371.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene63009 | 0.851986 | 6.21E-61 | -1.69E-46 |
| MS.gene049151 | MS.gene63009 | 0.829758 | 4.30E-55 | -1.69E-46 |
| MS.gene049153 | MS.gene63009 | 0.843689 | 1.20E-58 | -1.69E-46 |
| MS.gene049260 | MS.gene63009 | 0.863689 | 2.08E-64 | -1.69E-46 |
| MS.gene049284 | MS.gene63009 | 0.810883 | 9.23E-51 | -1.69E-46 |
| MS.gene049346 | MS.gene63009 | 0.849084 | 4.06E-60 | -1.69E-46 |
| MS.gene049351 | MS.gene63009 | 0.827656 | 1.39E-54 | -1.69E-46 |
| MS.gene049356 | MS.gene63009 | 0.811413 | 7.09E-51 | -1.69E-46 |
| MS.gene049389 | MS.gene63009 | 0.83826 | 3.20E-57 | -1.69E-46 |
| MS.gene049427 | MS.gene63009 | 0.825867 | 3.71E-54 | -1.69E-46 |
| MS.gene049491 | MS.gene63009 | 0.864499 | 1.16E-64 | -1.69E-46 |
| MS.gene049661 | MS.gene63009 | 0.849842 | 2.49E-60 | -1.69E-46 |
| MS.gene049662 | MS.gene63009 | 0.848272 | 6.81E-60 | -1.69E-46 |
| MS.gene049681 | MS.gene63009 | 0.803855 | 2.86E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene63009 | 0.89585 | 6.48E-76 | -1.69E-46 |
| MS.gene049910 | MS.gene63009 | 0.838263 | 3.19E-57 | -1.69E-46 |
| MS.gene049915 | MS.gene63009 | 0.804806 | 1.81E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene63009 | 0.856737 | 2.63E-62 | -1.69E-46 |
| MS.gene050099 | MS.gene63009 | 0.830764 | 2.44E-55 | -1.69E-46 |
| MS.gene050128 | MS.gene63009 | 0.861455 | 1.01E-63 | -1.69E-46 |
| MS.gene050301 | MS.gene63009 | 0.928799 | 1.73E-92 | -1.69E-46 |
| MS.gene050397 | MS.gene63009 | 0.82842 | 9.08E-55 | -1.69E-46 |
| MS.gene050406 | MS.gene63009 | 0.809362 | 1.96E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene63009 | 0.86864 | 5.62E-66 | -1.69E-46 |
| MS.gene050464 | MS.gene63009 | 0.828334 | 9.52E-55 | -1.69E-46 |
| MS.gene050529 | MS.gene63009 | 0.839757 | 1.31E-57 | -1.69E-46 |
| MS.gene050558 | MS.gene63009 | 0.8414 | 4.86E-58 | -1.69E-46 |
| MS.gene050560 | MS.gene63009 | 0.802385 | 5.75E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene63009 | 0.822392 | 2.43E-53 | -1.69E-46 |
| MS.gene050767 | MS.gene63009 | 0.806973 | 6.34E-50 | -1.69E-46 |
| MS.gene050770 | MS.gene63009 | 0.807142 | 5.84E-50 | -1.69E-46 |
| MS.gene050783 | MS.gene63009 | 0.834185 | 3.47E-56 | -1.69E-46 |
| MS.gene050812 | MS.gene63009 | 0.807098 | 5.97E-50 | -1.69E-46 |
| MS.gene05101 | MS.gene63009 | 0.89318 | 7.99E-75 | -1.69E-46 |
| MS.gene05105 | MS.gene63009 | 0.804516 | 2.08E-49 | -1.69E-46 |
| MS.gene05119 | MS.gene63009 | -0.821998 | 3.00E-53 | -1.69E-46 |
| MS.gene051360 | MS.gene63009 | 0.805853 | 1.09E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene63009 | 0.86776 | 1.08E-65 | -1.69E-46 |
| MS.gene051582 | MS.gene63009 | 0.865965 | 4.03E-65 | -1.69E-46 |
| MS.gene051662 | MS.gene63009 | 0.819442 | 1.16E-52 | -1.69E-46 |
| MS.gene051663 | MS.gene63009 | 0.860994 | 1.40E-63 | -1.69E-46 |
| MS.gene051860 | MS.gene63009 | 0.859729 | 3.38E-63 | -1.69E-46 |
| MS.gene051877 | MS.gene63009 | 0.805093 | 1.58E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene63009 | 0.860669 | 1.76E-63 | -1.69E-46 |
| MS.gene052178 | MS.gene63009 | 0.875406 | 3.16E-68 | -1.69E-46 |
| MS.gene052188 | MS.gene63009 | 0.887704 | 1.13E-72 | -1.69E-46 |
| MS.gene052207 | MS.gene63009 | 0.848106 | 7.57E-60 | -1.69E-46 |
| MS.gene052253 | MS.gene63009 | 0.84749 | 1.12E-59 | -1.69E-46 |
| MS.gene052287 | MS.gene63009 | 0.820709 | 5.94E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene63009 | 0.868788 | 5.03E-66 | -1.69E-46 |
| MS.gene052326 | MS.gene63009 | 0.861136 | 1.27E-63 | -1.69E-46 |
| MS.gene052340 | MS.gene63009 | 0.882406 | 1.07E-70 | -1.69E-46 |
| MS.gene052481 | MS.gene63009 | 0.802137 | 6.47E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene63009 | 0.851903 | 6.55E-61 | -1.69E-46 |
| MS.gene053073 | MS.gene63009 | 0.835697 | 1.44E-56 | -1.69E-46 |
| MS.gene05316 | MS.gene63009 | 0.819111 | 1.38E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene63009 | 0.856272 | 3.60E-62 | -1.69E-46 |
| MS.gene053557 | MS.gene63009 | 0.8512 | 1.04E-60 | -1.69E-46 |
| MS.gene053559 | MS.gene63009 | 0.826545 | 2.56E-54 | -1.69E-46 |
| MS.gene053836 | MS.gene63009 | 0.91124 | 7.60E-83 | -1.69E-46 |
| MS.gene053907 | MS.gene63009 | 0.823754 | 1.17E-53 | -1.69E-46 |
| MS.gene053928 | MS.gene63009 | 0.842368 | 2.70E-58 | -1.69E-46 |
| MS.gene054010 | MS.gene63009 | 0.823695 | 1.21E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene63009 | 0.829759 | 4.30E-55 | -1.69E-46 |
| MS.gene054012 | MS.gene63009 | 0.822655 | 2.11E-53 | -1.69E-46 |
| MS.gene054013 | MS.gene63009 | 0.819802 | 9.59E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene63009 | 0.868419 | 6.62E-66 | -1.69E-46 |
| MS.gene054183 | MS.gene63009 | 0.810721 | 1.00E-50 | -1.69E-46 |
| MS.gene054214 | MS.gene63009 | 0.818482 | 1.92E-52 | -1.69E-46 |
| MS.gene054349 | MS.gene63009 | 0.810467 | 1.14E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene63009 | 0.837642 | 4.61E-57 | -1.69E-46 |
| MS.gene054473 | MS.gene63009 | 0.866758 | 2.26E-65 | -1.69E-46 |
| MS.gene05455 | MS.gene63009 | 0.884557 | 1.73E-71 | -1.69E-46 |
| MS.gene054803 | MS.gene63009 | 0.80108 | 1.07E-48 | -1.69E-46 |
| MS.gene054930 | MS.gene63009 | 0.847875 | 8.77E-60 | -1.69E-46 |
| MS.gene054942 | MS.gene63009 | 0.802874 | 4.56E-49 | -1.69E-46 |
| MS.gene054983 | MS.gene63009 | 0.815968 | 7.04E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene63009 | 0.875227 | 3.64E-68 | -1.69E-46 |
| MS.gene055277 | MS.gene63009 | 0.886316 | 3.80E-72 | -1.69E-46 |
| MS.gene055303 | MS.gene63009 | 0.830856 | 2.32E-55 | -1.69E-46 |
| MS.gene055390 | MS.gene63009 | 0.891314 | 4.45E-74 | -1.69E-46 |
| MS.gene055412 | MS.gene63009 | 0.80791 | 4.01E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene63009 | 0.898847 | 3.55E-77 | -1.69E-46 |
| MS.gene055428 | MS.gene63009 | 0.900898 | 4.62E-78 | -1.69E-46 |
| MS.gene05553 | MS.gene63009 | 0.849688 | 2.75E-60 | -1.69E-46 |
| MS.gene055564 | MS.gene63009 | 0.806251 | 9.01E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene63009 | 0.866575 | 2.58E-65 | -1.69E-46 |
| MS.gene055712 | MS.gene63009 | 0.858839 | 6.25E-63 | -1.69E-46 |
| MS.gene056191 | MS.gene63009 | 0.848358 | 6.45E-60 | -1.69E-46 |
| MS.gene056407 | MS.gene63009 | 0.874847 | 4.91E-68 | -1.69E-46 |
| MS.gene056410 | MS.gene63009 | 0.830645 | 2.61E-55 | -1.69E-46 |
| MS.gene056451 | MS.gene63009 | 0.804009 | 2.65E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene63009 | 0.832357 | 9.90E-56 | -1.69E-46 |
| MS.gene056612 | MS.gene63009 | 0.882391 | 1.08E-70 | -1.69E-46 |
| MS.gene056659 | MS.gene63009 | 0.81809 | 2.35E-52 | -1.69E-46 |
| MS.gene056723 | MS.gene63009 | 0.831878 | 1.30E-55 | -1.69E-46 |
| MS.gene056875 | MS.gene63009 | 0.824872 | 6.38E-54 | -1.69E-46 |
| MS.gene056899 | MS.gene63009 | -0.817234 | 3.67E-52 | -1.69E-46 |
| MS.gene056902 | MS.gene63009 | 0.801556 | 8.51E-49 | -1.69E-46 |
| MS.gene056931 | MS.gene63009 | 0.844785 | 6.10E-59 | -1.69E-46 |
| MS.gene056933 | MS.gene63009 | 0.847011 | 1.51E-59 | -1.69E-46 |
| MS.gene056935 | MS.gene63009 | 0.827505 | 1.51E-54 | -1.69E-46 |
| MS.gene057011 | MS.gene63009 | 0.812982 | 3.22E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene63009 | 0.887917 | 9.36E-73 | -1.69E-46 |
| MS.gene057121 | MS.gene63009 | 0.867515 | 1.29E-65 | -1.69E-46 |
| MS.gene057124 | MS.gene63009 | 0.814103 | 1.83E-51 | -1.69E-46 |
| MS.gene057146 | MS.gene63009 | 0.804631 | 1.97E-49 | -1.69E-46 |
| MS.gene057245 | MS.gene63009 | 0.864224 | 1.42E-64 | -1.69E-46 |
| MS.gene057295 | MS.gene63009 | 0.809841 | 1.55E-50 | -1.69E-46 |
| MS.gene05733 | MS.gene63009 | 0.841376 | 4.94E-58 | -1.69E-46 |
| MS.gene057396 | MS.gene63009 | 0.814316 | 1.64E-51 | -1.69E-46 |
| MS.gene057439 | MS.gene63009 | 0.838677 | 2.49E-57 | -1.69E-46 |
| MS.gene057448 | MS.gene63009 | 0.87948 | 1.20E-69 | -1.69E-46 |
| MS.gene057449 | MS.gene63009 | 0.875335 | 3.34E-68 | -1.69E-46 |
| MS.gene057450 | MS.gene63009 | 0.89151 | 3.72E-74 | -1.69E-46 |
| MS.gene057469 | MS.gene63009 | 0.851413 | 9.02E-61 | -1.69E-46 |
| MS.gene057749 | MS.gene63009 | 0.831325 | 1.78E-55 | -1.69E-46 |
| MS.gene057750 | MS.gene63009 | 0.805892 | 1.07E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene63009 | 0.817629 | 2.99E-52 | -1.69E-46 |
| MS.gene057782 | MS.gene63009 | 0.814863 | 1.24E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene63009 | 0.822568 | 2.21E-53 | -1.69E-46 |
| MS.gene057825 | MS.gene63009 | 0.803977 | 2.69E-49 | -1.69E-46 |
| MS.gene058002 | MS.gene63009 | 0.913323 | 7.03E-84 | -1.69E-46 |
| MS.gene058082 | MS.gene63009 | 0.83306 | 6.62E-56 | -1.69E-46 |
| MS.gene05811 | MS.gene63009 | 0.888856 | 4.07E-73 | -1.69E-46 |
| MS.gene058142 | MS.gene63009 | 0.869593 | 2.76E-66 | -1.69E-46 |
| MS.gene058233 | MS.gene63009 | 0.839916 | 1.19E-57 | -1.69E-46 |
| MS.gene058236 | MS.gene63009 | 0.805025 | 1.63E-49 | -1.69E-46 |
| MS.gene058276 | MS.gene63009 | 0.812376 | 4.37E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene63009 | 0.856893 | 2.36E-62 | -1.69E-46 |
| MS.gene058365 | MS.gene63009 | 0.860638 | 1.80E-63 | -1.69E-46 |
| MS.gene05842 | MS.gene63009 | 0.835248 | 1.87E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene63009 | 0.883922 | 2.98E-71 | -1.69E-46 |
| MS.gene058710 | MS.gene63009 | 0.804157 | 2.47E-49 | -1.69E-46 |
| MS.gene058749 | MS.gene63009 | 0.825789 | 3.87E-54 | -1.69E-46 |
| MS.gene058787 | MS.gene63009 | 0.82289 | 1.86E-53 | -1.69E-46 |
| MS.gene058833 | MS.gene63009 | 0.810045 | 1.40E-50 | -1.69E-46 |
| MS.gene058845 | MS.gene63009 | 0.856432 | 3.23E-62 | -1.69E-46 |
| MS.gene05886 | MS.gene63009 | 0.853519 | 2.27E-61 | -1.69E-46 |
| MS.gene058928 | MS.gene63009 | 0.831496 | 1.62E-55 | -1.69E-46 |
| MS.gene058949 | MS.gene63009 | 0.827326 | 1.66E-54 | -1.69E-46 |
| MS.gene059011 | MS.gene63009 | 0.800216 | 1.60E-48 | -1.69E-46 |
| MS.gene05907 | MS.gene63009 | 0.896379 | 3.90E-76 | -1.69E-46 |
| MS.gene059141 | MS.gene63009 | 0.812117 | 4.98E-51 | -1.69E-46 |
| MS.gene059228 | MS.gene63009 | 0.827904 | 1.21E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene63009 | 0.828049 | 1.12E-54 | -1.69E-46 |
| MS.gene059294 | MS.gene63009 | 0.824668 | 7.13E-54 | -1.69E-46 |
| MS.gene059342 | MS.gene63009 | 0.805977 | 1.03E-49 | -1.69E-46 |
| MS.gene059366 | MS.gene63009 | 0.815311 | 9.86E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene63009 | 0.827385 | 1.61E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene63009 | 0.862675 | 4.28E-64 | -1.69E-46 |
| MS.gene059597 | MS.gene63009 | 0.899713 | 1.51E-77 | -1.69E-46 |
| MS.gene05959 | MS.gene63009 | 0.824716 | 6.94E-54 | -1.69E-46 |
| MS.gene059676 | MS.gene63009 | 0.875551 | 2.82E-68 | -1.69E-46 |
| MS.gene059688 | MS.gene63009 | 0.881728 | 1.89E-70 | -1.69E-46 |
| MS.gene059692 | MS.gene63009 | 0.887266 | 1.66E-72 | -1.69E-46 |
| MS.gene059695 | MS.gene63009 | 0.883971 | 2.85E-71 | -1.69E-46 |
| MS.gene059708 | MS.gene63009 | 0.828536 | 8.51E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene63009 | 0.859363 | 4.36E-63 | -1.69E-46 |
| MS.gene059894 | MS.gene63009 | 0.895736 | 7.22E-76 | -1.69E-46 |
| MS.gene059899 | MS.gene63009 | 0.850185 | 2.00E-60 | -1.69E-46 |
| MS.gene059960 | MS.gene63009 | 0.802255 | 6.12E-49 | -1.69E-46 |
| MS.gene059974 | MS.gene63009 | 0.827922 | 1.20E-54 | -1.69E-46 |
| MS.gene060005 | MS.gene63009 | 0.83033 | 3.12E-55 | -1.69E-46 |
| MS.gene06037 | MS.gene63009 | 0.88374 | 3.47E-71 | -1.69E-46 |
| MS.gene060403 | MS.gene63009 | 0.817912 | 2.58E-52 | -1.69E-46 |
| MS.gene060407 | MS.gene63009 | 0.865046 | 7.84E-65 | -1.69E-46 |
| MS.gene060476 | MS.gene63009 | 0.825267 | 5.15E-54 | -1.69E-46 |
| MS.gene060495 | MS.gene63009 | 0.839679 | 1.37E-57 | -1.69E-46 |
| MS.gene060559 | MS.gene63009 | 0.85354 | 2.23E-61 | -1.69E-46 |
| MS.gene061049 | MS.gene63009 | 0.916867 | 1.06E-85 | -1.69E-46 |
| MS.gene061051 | MS.gene63009 | -0.87901 | 1.77E-69 | -1.69E-46 |
| MS.gene061112 | MS.gene63009 | 0.859888 | 3.03E-63 | -1.69E-46 |
| MS.gene061113 | MS.gene63009 | 0.807753 | 4.33E-50 | -1.69E-46 |
| MS.gene061159 | MS.gene63009 | 0.842096 | 3.19E-58 | -1.69E-46 |
| MS.gene061265 | MS.gene63009 | 0.859855 | 3.10E-63 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63009.t1 | MTR_1g030290 | 98.135 | 697 | 12 | 1 | 1 | 697 | 1 | 696 | 0.0 | 1401 |
| MS.gene63009.t1 | MTR_3g087980 | 76.580 | 696 | 160 | 2 | 1 | 696 | 1 | 693 | 0.0 | 1116 |
| MS.gene63009.t1 | MTR_3g082660 | 62.787 | 696 | 252 | 4 | 5 | 696 | 35 | 727 | 0.0 | 897 |
| MS.gene63009.t1 | MTR_1g104810 | 34.206 | 649 | 375 | 11 | 57 | 696 | 80 | 685 | 7.22e-116 | 363 |
| MS.gene63009.t1 | MTR_1g104810 | 34.660 | 603 | 358 | 9 | 103 | 696 | 43 | 618 | 2.13e-115 | 360 |
| MS.gene63009.t1 | MTR_7g109830 | 33.029 | 657 | 377 | 15 | 57 | 695 | 41 | 652 | 3.56e-102 | 327 |
| MS.gene63009.t1 | MTR_5g009350 | 33.384 | 653 | 386 | 15 | 56 | 697 | 42 | 656 | 1.22e-100 | 323 |
| MS.gene63009.t1 | MTR_5g009350 | 33.540 | 644 | 379 | 15 | 56 | 688 | 42 | 647 | 6.77e-100 | 320 |
| MS.gene63009.t1 | MTR_1g086600 | 32.972 | 646 | 388 | 13 | 62 | 697 | 68 | 678 | 2.28e-99 | 320 |
| MS.gene63009.t1 | MTR_5g009360 | 32.925 | 653 | 389 | 15 | 56 | 697 | 42 | 656 | 6.45e-98 | 316 |
| MS.gene63009.t1 | MTR_4g068670 | 32.290 | 607 | 368 | 14 | 104 | 695 | 73 | 651 | 8.85e-97 | 313 |
| MS.gene63009.t1 | MTR_8g099420 | 31.108 | 659 | 395 | 13 | 55 | 697 | 42 | 657 | 1.89e-96 | 311 |
| MS.gene63009.t1 | MTR_1g034360 | 31.260 | 611 | 370 | 15 | 104 | 695 | 74 | 653 | 4.45e-88 | 290 |
| MS.gene63009.t1 | MTR_5g009350 | 33.630 | 562 | 322 | 15 | 56 | 606 | 42 | 563 | 1.76e-84 | 278 |
| MS.gene63009.t1 | MTR_5g009350 | 33.631 | 559 | 323 | 14 | 56 | 603 | 42 | 563 | 9.29e-84 | 276 |
| MS.gene63009.t1 | MTR_5g009360 | 35.185 | 540 | 313 | 14 | 169 | 697 | 17 | 530 | 7.79e-82 | 270 |
| MS.gene63009.t1 | MTR_3g084450 | 26.000 | 650 | 381 | 16 | 109 | 695 | 107 | 719 | 3.42e-45 | 172 |
| MS.gene63009.t1 | MTR_3g084470 | 26.121 | 647 | 381 | 22 | 109 | 695 | 105 | 714 | 5.17e-41 | 160 |
| MS.gene63009.t1 | MTR_8g083170 | 25.545 | 642 | 396 | 17 | 109 | 695 | 109 | 723 | 5.39e-37 | 148 |
| MS.gene63009.t1 | MTR_3g084450 | 27.475 | 495 | 272 | 14 | 251 | 695 | 54 | 511 | 2.00e-35 | 141 |
| MS.gene63009.t1 | MTR_5g027500 | 26.680 | 491 | 254 | 23 | 118 | 582 | 78 | 488 | 1.89e-23 | 105 |
| MS.gene63009.t1 | MTR_4g077900 | 30.058 | 346 | 160 | 16 | 251 | 582 | 121 | 398 | 2.63e-23 | 104 |
| MS.gene63009.t1 | MTR_5g027480 | 28.571 | 350 | 170 | 16 | 251 | 587 | 198 | 480 | 2.91e-21 | 98.6 |
| MS.gene63009.t1 | MTR_4g128337 | 24.602 | 565 | 331 | 16 | 107 | 651 | 57 | 546 | 8.96e-19 | 90.9 |
| MS.gene63009.t1 | MTR_1g026310 | 27.647 | 340 | 178 | 13 | 251 | 584 | 205 | 482 | 3.59e-18 | 89.0 |
| MS.gene63009.t1 | MTR_8g039720 | 26.254 | 339 | 184 | 10 | 251 | 584 | 208 | 485 | 9.02e-17 | 84.7 |
| MS.gene63009.t1 | MTR_3g035130 | 25.872 | 344 | 187 | 10 | 240 | 579 | 153 | 432 | 5.80e-16 | 81.6 |
| MS.gene63009.t1 | MTR_3g035130 | 25.872 | 344 | 187 | 10 | 240 | 579 | 153 | 432 | 7.06e-16 | 81.6 |
| MS.gene63009.t1 | MTR_5g076220 | 34.161 | 161 | 89 | 5 | 444 | 593 | 322 | 476 | 5.20e-14 | 75.9 |
| MS.gene63009.t1 | MTR_5g007640 | 33.143 | 175 | 91 | 8 | 422 | 584 | 349 | 509 | 7.65e-14 | 75.5 |
| MS.gene63009.t1 | MTR_4g057730 | 30.374 | 214 | 123 | 9 | 422 | 620 | 307 | 509 | 1.13e-13 | 74.7 |
| MS.gene63009.t1 | MTR_2g095510 | 31.977 | 172 | 94 | 9 | 422 | 584 | 304 | 461 | 1.42e-13 | 74.3 |
| MS.gene63009.t1 | MTR_1g063110 | 27.778 | 216 | 128 | 9 | 422 | 620 | 311 | 515 | 1.81e-13 | 73.9 |
| MS.gene63009.t1 | MTR_4g057730 | 32.749 | 171 | 98 | 7 | 422 | 586 | 307 | 466 | 2.55e-13 | 73.2 |
| MS.gene63009.t1 | MTR_2g105570 | 27.459 | 244 | 153 | 8 | 422 | 649 | 310 | 545 | 6.50e-13 | 72.4 |
| MS.gene63009.t1 | MTR_2g095510 | 32.895 | 152 | 80 | 8 | 422 | 564 | 304 | 442 | 9.65e-13 | 71.2 |
| MS.gene63009.t1 | MTR_4g057730 | 34.228 | 149 | 82 | 6 | 422 | 564 | 307 | 445 | 2.83e-12 | 69.7 |
| MS.gene63009.t1 | MTR_1g063120 | 30.055 | 183 | 111 | 7 | 413 | 586 | 302 | 476 | 3.16e-12 | 70.1 |
| MS.gene63009.t1 | MTR_5g076240 | 48.193 | 83 | 37 | 3 | 503 | 585 | 391 | 467 | 3.46e-12 | 70.1 |
| MS.gene63009.t1 | MTR_5g076200 | 40.952 | 105 | 56 | 3 | 489 | 593 | 378 | 476 | 1.38e-11 | 68.2 |
| MS.gene63009.t1 | MTR_0161s0050 | 34.161 | 161 | 89 | 6 | 444 | 593 | 324 | 478 | 1.41e-11 | 68.2 |
| MS.gene63009.t1 | MTR_3g064420 | 32.948 | 173 | 94 | 6 | 425 | 584 | 306 | 469 | 1.44e-11 | 68.2 |
| MS.gene63009.t1 | MTR_3g088870 | 35.570 | 149 | 80 | 7 | 422 | 564 | 323 | 461 | 1.57e-11 | 67.8 |
| MS.gene63009.t1 | MTR_1g090737 | 29.341 | 167 | 106 | 6 | 422 | 584 | 330 | 488 | 5.57e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63009.t1 | AT1G77590 | 72.166 | 697 | 187 | 4 | 1 | 696 | 1 | 691 | 0.0 | 1056 |
| MS.gene63009.t1 | AT1G77590 | 78.976 | 547 | 112 | 1 | 150 | 696 | 2 | 545 | 0.0 | 914 |
| MS.gene63009.t1 | AT2G04350 | 62.555 | 681 | 247 | 5 | 20 | 696 | 44 | 720 | 0.0 | 879 |
| MS.gene63009.t1 | AT2G04350 | 62.555 | 681 | 247 | 5 | 20 | 696 | 44 | 720 | 0.0 | 879 |
| MS.gene63009.t1 | AT5G27600 | 34.776 | 647 | 374 | 13 | 57 | 696 | 83 | 688 | 1.30e-122 | 381 |
| MS.gene63009.t1 | AT3G05970 | 35.039 | 645 | 373 | 12 | 57 | 695 | 83 | 687 | 3.10e-115 | 362 |
| MS.gene63009.t1 | AT2G47240 | 32.579 | 663 | 383 | 15 | 48 | 695 | 39 | 652 | 4.41e-97 | 313 |
| MS.gene63009.t1 | AT2G47240 | 32.579 | 663 | 383 | 15 | 48 | 695 | 39 | 652 | 4.41e-97 | 313 |
| MS.gene63009.t1 | AT2G47240 | 32.579 | 663 | 383 | 15 | 48 | 695 | 39 | 652 | 4.41e-97 | 313 |
| MS.gene63009.t1 | AT4G11030 | 31.194 | 670 | 406 | 15 | 40 | 697 | 31 | 657 | 1.61e-96 | 312 |
| MS.gene63009.t1 | AT2G47240 | 33.333 | 609 | 365 | 12 | 102 | 695 | 11 | 593 | 2.39e-96 | 310 |
| MS.gene63009.t1 | AT1G49430 | 31.279 | 649 | 393 | 14 | 62 | 696 | 49 | 658 | 3.38e-95 | 308 |
| MS.gene63009.t1 | AT4G23850 | 31.729 | 665 | 397 | 16 | 46 | 697 | 37 | 657 | 1.19e-94 | 307 |
| MS.gene63009.t1 | AT1G64400 | 31.788 | 604 | 377 | 12 | 104 | 695 | 75 | 655 | 1.11e-93 | 305 |
| MS.gene63009.t1 | AT1G49430 | 30.832 | 493 | 288 | 14 | 62 | 540 | 49 | 502 | 1.00e-62 | 218 |
| MS.gene63009.t1 | AT3G23790 | 26.521 | 641 | 387 | 20 | 109 | 695 | 111 | 721 | 4.34e-44 | 169 |
| MS.gene63009.t1 | AT4G14070 | 25.077 | 646 | 381 | 18 | 109 | 696 | 127 | 727 | 1.22e-41 | 162 |
| MS.gene63009.t1 | AT4G19010 | 31.186 | 388 | 186 | 19 | 251 | 620 | 205 | 529 | 2.67e-28 | 120 |
| MS.gene63009.t1 | AT1G20500 | 26.329 | 414 | 220 | 15 | 251 | 644 | 198 | 546 | 2.22e-21 | 99.0 |
| MS.gene63009.t1 | AT1G20510 | 28.401 | 419 | 204 | 18 | 229 | 620 | 162 | 511 | 3.17e-20 | 95.5 |
| MS.gene63009.t1 | AT1G20510 | 28.989 | 376 | 180 | 16 | 229 | 586 | 162 | 468 | 3.31e-19 | 91.7 |
| MS.gene63009.t1 | AT1G65060 | 24.691 | 486 | 269 | 17 | 110 | 579 | 77 | 481 | 6.55e-19 | 91.3 |
| MS.gene63009.t1 | AT1G65060 | 24.628 | 471 | 259 | 17 | 110 | 564 | 77 | 467 | 2.11e-18 | 89.4 |
| MS.gene63009.t1 | AT1G20510 | 29.096 | 354 | 165 | 15 | 229 | 564 | 162 | 447 | 1.37e-17 | 86.7 |
| MS.gene63009.t1 | AT1G51680 | 24.150 | 559 | 317 | 23 | 120 | 649 | 77 | 557 | 3.38e-17 | 85.9 |
| MS.gene63009.t1 | AT5G16370 | 29.508 | 366 | 158 | 14 | 251 | 593 | 186 | 474 | 5.97e-17 | 85.1 |
| MS.gene63009.t1 | AT1G51680 | 27.363 | 402 | 202 | 19 | 207 | 591 | 162 | 490 | 1.99e-16 | 83.6 |
| MS.gene63009.t1 | AT1G51680 | 27.363 | 402 | 202 | 19 | 207 | 591 | 162 | 490 | 2.96e-16 | 82.8 |
| MS.gene63009.t1 | AT4G05160 | 28.226 | 248 | 139 | 11 | 422 | 645 | 309 | 541 | 7.67e-16 | 81.6 |
| MS.gene63009.t1 | AT5G16340 | 29.014 | 355 | 174 | 13 | 251 | 593 | 186 | 474 | 1.49e-15 | 80.9 |
| MS.gene63009.t1 | AT1G75960 | 34.715 | 193 | 95 | 7 | 418 | 593 | 296 | 474 | 5.18e-14 | 75.9 |
| MS.gene63009.t1 | AT1G21540 | 34.161 | 161 | 90 | 5 | 444 | 593 | 322 | 477 | 8.05e-14 | 75.1 |
| MS.gene63009.t1 | AT3G48990 | 32.335 | 167 | 99 | 5 | 421 | 584 | 281 | 436 | 8.84e-14 | 75.1 |
| MS.gene63009.t1 | AT1G20480 | 30.769 | 208 | 124 | 8 | 425 | 620 | 333 | 532 | 4.12e-13 | 73.2 |
| MS.gene63009.t1 | AT1G77240 | 45.055 | 91 | 45 | 2 | 503 | 593 | 390 | 475 | 5.14e-13 | 72.8 |
| MS.gene63009.t1 | AT3G21230 | 26.749 | 243 | 156 | 8 | 422 | 650 | 331 | 565 | 1.06e-12 | 71.6 |
| MS.gene63009.t1 | AT3G21240 | 27.309 | 249 | 146 | 11 | 422 | 649 | 316 | 550 | 1.52e-12 | 71.2 |
| MS.gene63009.t1 | AT1G21530 | 41.758 | 91 | 48 | 2 | 503 | 593 | 387 | 472 | 2.79e-12 | 70.5 |
| MS.gene63009.t1 | AT1G21530 | 41.758 | 91 | 48 | 2 | 503 | 593 | 389 | 474 | 2.82e-12 | 70.5 |
| MS.gene63009.t1 | AT3G21240 | 30.769 | 182 | 100 | 9 | 422 | 591 | 316 | 483 | 1.62e-11 | 67.8 |
| MS.gene63009.t1 | AT3G21240 | 30.769 | 182 | 100 | 9 | 422 | 591 | 316 | 483 | 1.62e-11 | 67.8 |
| MS.gene63009.t1 | AT3G21230 | 30.588 | 170 | 105 | 6 | 422 | 586 | 331 | 492 | 1.84e-11 | 67.8 |
| MS.gene63009.t1 | AT3G21230 | 30.588 | 170 | 105 | 6 | 422 | 586 | 331 | 492 | 2.21e-11 | 67.4 |
Find 193 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGGCGGTGCTCCCCTTTC+TGG | 0.196224 | 1.3:-16236095 | MS.gene63009:CDS |
| TCTTCCTTGCTCATTTATTA+AGG | 0.207102 | 1.3:-16234965 | MS.gene63009:intron |
| TGTTCCCAAACTTGAGAAAA+AGG | 0.223387 | 1.3:-16237071 | MS.gene63009:CDS |
| TGAATGGTTCCTTGCTCTTC+AGG | 0.232308 | 1.3:-16239297 | MS.gene63009:intron |
| TTCTGCTTCAGGGTTGTTTC+AGG | 0.236650 | 1.3:-16238065 | MS.gene63009:intron |
| TGTGTTGATGCCAACTTTAT+TGG | 0.245256 | 1.3:-16236770 | MS.gene63009:CDS |
| AATCAAGGAATTCCTTATTC+AGG | 0.263628 | 1.3:-16233231 | MS.gene63009:CDS |
| GGGGATTGGAGAAGGCTCTC+TGG | 0.278772 | 1.3:-16236178 | MS.gene63009:CDS |
| TACTGGAACTCCACGGCGTT+TGG | 0.282850 | 1.3:+16239661 | None:intergenic |
| ACTGGAACTCCACGGCGTTT+GGG | 0.294887 | 1.3:+16239662 | None:intergenic |
| AGGAGGTTGAAAGCAGTTAA+TGG | 0.295468 | 1.3:-16236218 | MS.gene63009:CDS |
| TGATCGTCCGCGGAGTTTAC+TGG | 0.297128 | 1.3:+16239644 | None:intergenic |
| AGAAATCATTGATCGTAAAA+AGG | 0.325053 | 1.3:-16233938 | MS.gene63009:CDS |
| AGACCATATCCTTGACCTAT+TGG | 0.336719 | 1.3:+16235057 | None:intergenic |
| TGCTAGTGGTTTGGCTGTGT+TGG | 0.348285 | 1.3:-16239366 | MS.gene63009:CDS |
| GCAGTTAATGGAAGCTGGTT+TGG | 0.349164 | 1.3:-16236206 | MS.gene63009:CDS |
| TTAGTTAAATATCCACCTTC+AGG | 0.376720 | 1.3:+16234448 | None:intergenic |
| GGGATTGGAGAAGGCTCTCT+GGG | 0.383295 | 1.3:-16236177 | MS.gene63009:CDS |
| ATGGAAGCTGGTTTGGAGCC+TGG | 0.384214 | 1.3:-16236199 | MS.gene63009:CDS |
| ATGGAAAGGATGAGAGGGTT+GGG | 0.386145 | 1.3:-16239340 | MS.gene63009:CDS |
| GTTGGGATACCTATAGGATA+TGG | 0.388445 | 1.3:-16236856 | MS.gene63009:CDS |
| CCTCGTGGAGAAATTGTAAT+TGG | 0.388867 | 1.3:-16234412 | MS.gene63009:CDS |
| TGTAACGATGTATGCATCAT+TGG | 0.392960 | 1.3:-16238028 | MS.gene63009:CDS |
| ATAACTTCAGAAGATCTTCC+TGG | 0.394589 | 1.3:+16232472 | None:intergenic |
| TCTGAAGTTATACGCTTCAT+AGG | 0.395208 | 1.3:-16232460 | None:intergenic |
| TGCGGCTAGGTTGATGAAAA+AGG | 0.395377 | 1.3:-16234015 | MS.gene63009:intron |
| GATCCATGGACACCTGAGTC+TGG | 0.398942 | 1.3:-16232546 | MS.gene63009:CDS |
| CTCAGTCCACATTGGAAGAA+TGG | 0.398978 | 1.3:-16233260 | MS.gene63009:CDS |
| GCTAGTGGTTTGGCTGTGTT+GGG | 0.401073 | 1.3:-16239365 | MS.gene63009:CDS |
| TGGAAGCTGGTTTGGAGCCT+GGG | 0.403407 | 1.3:-16236198 | MS.gene63009:CDS |
| GGAAGCAAAGAAAGCTCGTT+TGG | 0.403415 | 1.3:-16232607 | MS.gene63009:CDS |
| TTAAATTGCTTTCTGATCCA+TGG | 0.411441 | 1.3:-16232560 | MS.gene63009:CDS |
| CAAGTGCCACACAGTAACTA+TGG | 0.413049 | 1.3:+16233292 | None:intergenic |
| GCATGGAGAGTATGTTTCCT+TGG | 0.413823 | 1.3:-16233899 | MS.gene63009:CDS |
| CTGCTGAGTATCACCAGAAA+GGG | 0.422987 | 1.3:+16236082 | None:intergenic |
| TCAGTCCACATTGGAAGAAT+GGG | 0.429822 | 1.3:-16233259 | MS.gene63009:CDS |
| AGTGGTTGTTTCGAAGGAAA+TGG | 0.431521 | 1.3:-16239489 | MS.gene63009:CDS |
| CTGGTTTGGAGCCTGGGGAT+TGG | 0.432080 | 1.3:-16236192 | MS.gene63009:CDS |
| TGGAGCCTGGGGATTGGAGA+AGG | 0.435820 | 1.3:-16236186 | MS.gene63009:CDS |
| TGTTAGGTTTGCTAGTGGTT+TGG | 0.437204 | 1.3:-16239375 | MS.gene63009:CDS |
| AACATTATATTGTCCACATA+GGG | 0.443303 | 1.3:+16233330 | None:intergenic |
| ATGATAACTGCAACATCAGC+TGG | 0.443496 | 1.3:+16237633 | None:intergenic |
| ATACCTCAGCTGCTAGTTCA+AGG | 0.446682 | 1.3:+16237014 | None:intergenic |
| AAGATTAAGAAAGGAACAAA+GGG | 0.448860 | 1.3:-16236802 | MS.gene63009:CDS |
| TGGGGTGGTTAGTACGGAAC+AGG | 0.452077 | 1.3:+16239681 | None:intergenic |
| GGCGTTTGGGGTGGTTAGTA+CGG | 0.452918 | 1.3:+16239675 | None:intergenic |
| TTGCTGATACTAGGGTTGAA+TGG | 0.455217 | 1.3:-16239313 | MS.gene63009:CDS |
| GGCCGTCAGAAAGACTTTCC+AGG | 0.457546 | 1.3:-16232490 | MS.gene63009:CDS |
| CGCATCCGTTTCATACTGTC+TGG | 0.460106 | 1.3:-16236113 | MS.gene63009:CDS |
| AAAGGAGATCCATATCCTAT+AGG | 0.461389 | 1.3:+16236847 | None:intergenic |
| CATGGAAAGGATGAGAGGGT+TGG | 0.461442 | 1.3:-16239341 | MS.gene63009:CDS |
| CATGGAGAGTATGTTTCCTT+GGG | 0.466180 | 1.3:-16233898 | MS.gene63009:CDS |
| TGCTTTCAACCTCCTCTCAT+AGG | 0.467574 | 1.3:+16236226 | None:intergenic |
| CCTCATCTGTTGGACACGGC+TGG | 0.471706 | 1.3:-16237725 | MS.gene63009:CDS |
| GCAGCAGTTGGGATACCTAT+AGG | 0.472722 | 1.3:-16236862 | MS.gene63009:CDS |
| ATGTATACAAGTGGAAGTAC+TGG | 0.474903 | 1.3:-16237612 | MS.gene63009:CDS |
| CAGTTCATCAATATCTGTCT+TGG | 0.475583 | 1.3:-16236062 | MS.gene63009:CDS |
| AGAGGTAAATCAGCATCAAC+AGG | 0.476714 | 1.3:+16237657 | None:intergenic |
| CCATCTGATGCCTCATCTGT+TGG | 0.477457 | 1.3:-16237735 | MS.gene63009:CDS |
| ACAATTTCTCCACGAGGCAT+TGG | 0.478544 | 1.3:+16234418 | None:intergenic |
| AAGTAACCAAGAGTGACATT+TGG | 0.478964 | 1.3:+16234385 | None:intergenic |
| CTTCGCCGGTGGAGACGGCA+TGG | 0.479046 | 1.3:-16239589 | MS.gene63009:CDS |
| AACAGGAGAGTTGCGAGGAT+GGG | 0.479057 | 1.3:+16239698 | None:intergenic |
| TGAAAGCAGTTAATGGAAGC+TGG | 0.480204 | 1.3:-16236211 | MS.gene63009:CDS |
| GAAGAATGGGCTTCAAATCA+AGG | 0.482234 | 1.3:-16233246 | MS.gene63009:CDS |
| CTGGAACTCCACGGCGTTTG+GGG | 0.485413 | 1.3:+16239663 | None:intergenic |
| TAGAATTTGATGGCAGCAGT+TGG | 0.491226 | 1.3:-16236874 | MS.gene63009:CDS |
| CCAATGTAGGTGAATGCAAC+GGG | 0.492645 | 1.3:-16236278 | MS.gene63009:intron |
| TTGAATTGGGTGAGTATGAA+TGG | 0.493545 | 1.3:-16239427 | MS.gene63009:CDS |
| AAAACACTTGTAAATATTAG+CGG | 0.496596 | 1.3:-16237804 | MS.gene63009:CDS |
| CAACATTATATTGTCCACAT+AGG | 0.498047 | 1.3:+16233329 | None:intergenic |
| GGTGGTCCAAATGTCACTCT+TGG | 0.500524 | 1.3:-16234391 | MS.gene63009:CDS |
| TGGTTCTACACTGGTGACAT+AGG | 0.500937 | 1.3:-16233985 | MS.gene63009:CDS |
| TTTATGTCACTCATTGAATG+AGG | 0.503431 | 1.3:-16237995 | MS.gene63009:intron |
| GTAACGATGTATGCATCATT+GGG | 0.503568 | 1.3:-16238027 | MS.gene63009:CDS |
| TTACTGTGTGGCACTTGTTG+TGG | 0.503677 | 1.3:-16233286 | MS.gene63009:CDS |
| GAGTATGATGGTGACAATGT+AGG | 0.503858 | 1.3:+16239721 | None:intergenic |
| TTAATAAATGAGCAAGGAAG+AGG | 0.507013 | 1.3:+16234967 | None:intergenic |
| GATGTATCTGTGAGGGTCAA+AGG | 0.507460 | 1.3:+16236829 | None:intergenic |
| GTCATTTCCAGTGCTCCAAT+AGG | 0.507815 | 1.3:-16235072 | MS.gene63009:intron |
| ATTTGCTTCGCCGGTGGAGA+CGG | 0.509942 | 1.3:-16239594 | MS.gene63009:CDS |
| ATGGAGAAGAGTGGTGGTGA+TGG | 0.510454 | 1.3:-16239470 | MS.gene63009:CDS |
| GCTCCAATAGGTCAAGGATA+TGG | 0.512887 | 1.3:-16235060 | MS.gene63009:CDS |
| AGTATGATGGTGACAATGTA+GGG | 0.514432 | 1.3:+16239722 | None:intergenic |
| AGTTCATCAATATCTGTCTT+GGG | 0.515096 | 1.3:-16236061 | MS.gene63009:intron |
| TTTGCAGATGTTAAGCGACT+TGG | 0.516699 | 1.3:-16237690 | MS.gene63009:CDS |
| ACAGGAGAGTTGCGAGGATG+GGG | 0.517085 | 1.3:+16239699 | None:intergenic |
| GGCTGTGTTGGGACATGGAA+AGG | 0.517980 | 1.3:-16239354 | MS.gene63009:CDS |
| AACAAGAGTGGTTGTTTCGA+AGG | 0.522687 | 1.3:-16239495 | MS.gene63009:CDS |
| CGAACACGGTCAAGAATTGC+TGG | 0.522952 | 1.3:+16236739 | None:intergenic |
| AGAATTTGATGGCAGCAGTT+GGG | 0.524314 | 1.3:-16236873 | MS.gene63009:CDS |
| GAGAAGAGTGGTGGTGATGG+TGG | 0.532291 | 1.3:-16239467 | MS.gene63009:CDS |
| AAGCCAGACTCAGGTGTCCA+TGG | 0.533358 | 1.3:+16232543 | None:intergenic |
| ACATCAAGCAAGATTAAGAA+AGG | 0.535370 | 1.3:-16236811 | MS.gene63009:CDS |
| GTAAACTCCGCGGACGATCA+AGG | 0.536566 | 1.3:-16239641 | MS.gene63009:CDS |
| CCTTCCCATGCCGTCTCCAC+CGG | 0.538531 | 1.3:+16239584 | None:intergenic |
| GGTTTGGCTGTGTTGGGACA+TGG | 0.539640 | 1.3:-16239359 | MS.gene63009:CDS |
| CCAACAGATGAGGCATCAGA+TGG | 0.541242 | 1.3:+16237735 | None:intergenic |
| AATTATTTGAAGAAGCATGC+AGG | 0.546442 | 1.3:-16239544 | MS.gene63009:CDS |
| CGTGGAGAAATTGTAATTGG+TGG | 0.547343 | 1.3:-16234409 | MS.gene63009:CDS |
| ATAGGGAGGTTTCATCAAGA+TGG | 0.548115 | 1.3:-16233967 | MS.gene63009:CDS |
| GAACAGGAGAGTTGCGAGGA+TGG | 0.548506 | 1.3:+16239697 | None:intergenic |
| GATACATCTGTTGGCCGTGT+TGG | 0.550940 | 1.3:-16234994 | MS.gene63009:CDS |
| AGAGTATGTTTCCTTGGGAA+AGG | 0.550970 | 1.3:-16233893 | MS.gene63009:intron |
| GCATACGGAGAGATTACTGT+TGG | 0.551893 | 1.3:-16239519 | MS.gene63009:CDS |
| GGTACAGCAGCCAATAAAGT+TGG | 0.552940 | 1.3:+16236760 | None:intergenic |
| GAGAGCCTTCTCCAATCCCC+AGG | 0.553126 | 1.3:+16236181 | None:intergenic |
| CCACACAGTAACTATGGAAA+GGG | 0.553679 | 1.3:+16233298 | None:intergenic |
| CAAGATTAAGAAAGGAACAA+AGG | 0.555027 | 1.3:-16236803 | MS.gene63009:CDS |
| GGTGCATGCATCACTAGTAA+AGG | 0.555060 | 1.3:-16233169 | MS.gene63009:intron |
| AGGTCACGACAGTAATTTGT+GGG | 0.556939 | 1.3:-16237839 | MS.gene63009:CDS |
| CACCGCCAGACAGTATGAAA+CGG | 0.564677 | 1.3:+16236108 | None:intergenic |
| GGTTCTACACTGGTGACATA+GGG | 0.565337 | 1.3:-16233984 | MS.gene63009:CDS |
| ACTGCTGAGTATCACCAGAA+AGG | 0.570535 | 1.3:+16236081 | None:intergenic |
| ATTCTTGACCGTGTTCGCGA+TGG | 0.574052 | 1.3:-16236733 | MS.gene63009:CDS |
| TGCGAGGATGGGGAGTATGA+TGG | 0.575752 | 1.3:+16239709 | None:intergenic |
| CAGAAGATTTGCTTCGCCGG+TGG | 0.575937 | 1.3:-16239600 | MS.gene63009:CDS |
| CCGGTGGAGACGGCATGGGA+AGG | 0.576169 | 1.3:-16239584 | MS.gene63009:CDS |
| TGGAAGTACTGGATTACCTA+AGG | 0.576756 | 1.3:-16237601 | MS.gene63009:intron |
| TTCCTGGAAAGTCTTTCTGA+CGG | 0.577666 | 1.3:+16232488 | None:intergenic |
| AGTTCAAGGATATGAGCCAT+TGG | 0.579034 | 1.3:+16237028 | None:intergenic |
| TGAACACACCATCGCGAACA+CGG | 0.581298 | 1.3:+16236725 | None:intergenic |
| GCAGTGACTAAGCCAGACTC+AGG | 0.581299 | 1.3:+16232534 | None:intergenic |
| AGAAGCATGCAGGAAGCATA+CGG | 0.584187 | 1.3:-16239534 | MS.gene63009:CDS |
| TAGCTAATCGACTGGCCTGA+AGG | 0.584227 | 1.3:-16234463 | MS.gene63009:CDS |
| GCAGTTATCATGTATACAAG+TGG | 0.584330 | 1.3:-16237621 | MS.gene63009:CDS |
| TCCAGTGCTCCAATAGGTCA+AGG | 0.584850 | 1.3:-16235066 | MS.gene63009:intron |
| TTTACCTTAATAAATGAGCA+AGG | 0.585073 | 1.3:+16234961 | None:intergenic |
| GAACTCCACGGCGTTTGGGG+TGG | 0.585628 | 1.3:+16239666 | None:intergenic |
| TGTGGCTTCTCAGTCCACAT+TGG | 0.586175 | 1.3:-16233268 | MS.gene63009:CDS |
| GGGACATGGAAAGGATGAGA+GGG | 0.587034 | 1.3:-16239345 | MS.gene63009:CDS |
| ATTACTGTTGGGAACAAGAG+TGG | 0.589151 | 1.3:-16239507 | MS.gene63009:CDS |
| GATGTATGCATCATTGGGAG+AGG | 0.590579 | 1.3:-16238022 | MS.gene63009:CDS |
| TTCGCCGGTGGAGACGGCAT+GGG | 0.591329 | 1.3:-16239588 | MS.gene63009:CDS |
| GCCAATGTAGGTGAATGCAA+CGG | 0.592102 | 1.3:-16236279 | MS.gene63009:intron |
| GAACAGAAGATTTGCTTCGC+CGG | 0.592463 | 1.3:-16239603 | MS.gene63009:CDS |
| GCCACACAGTAACTATGGAA+AGG | 0.592809 | 1.3:+16233297 | None:intergenic |
| AAAATCCGAGCAATTCTTGG+TGG | 0.592932 | 1.3:-16236137 | MS.gene63009:CDS |
| GGAAGGAGTGAGTACATTGG+CGG | 0.594382 | 1.3:-16239567 | MS.gene63009:CDS |
| ACTGCAACATCAGCTGGGAG+AGG | 0.595197 | 1.3:+16237639 | None:intergenic |
| TCGAAGGAAATGGAGAAGAG+TGG | 0.595299 | 1.3:-16239479 | MS.gene63009:CDS |
| CTAATCGACTGGCCTGAAGG+TGG | 0.598093 | 1.3:-16234460 | MS.gene63009:CDS |
| TCTTATTGTCAGCCCCTATG+TGG | 0.599891 | 1.3:-16233343 | MS.gene63009:CDS |
| TGGGACATGGAAAGGATGAG+AGG | 0.600615 | 1.3:-16239346 | MS.gene63009:CDS |
| TTAGTATCATACCTTTCCCA+AGG | 0.600980 | 1.3:+16233882 | None:intergenic |
| TTTATTTAGCCTATGAGAGG+AGG | 0.601307 | 1.3:-16236235 | MS.gene63009:CDS |
| GGTCTTACAGAGACTTGTGC+TGG | 0.601412 | 1.3:-16235039 | MS.gene63009:CDS |
| AAGTCGCTTAACATCTGCAA+AGG | 0.603112 | 1.3:+16237692 | None:intergenic |
| CCCTTTCCATAGTTACTGTG+TGG | 0.606415 | 1.3:-16233298 | MS.gene63009:CDS |
| GGAAGCTGGTTTGGAGCCTG+GGG | 0.608440 | 1.3:-16236197 | MS.gene63009:CDS |
| TGCGACCACCAAGAATTGCT+CGG | 0.608998 | 1.3:+16236132 | None:intergenic |
| TGCTCTCAAGCTCAAGAGAG+AGG | 0.609631 | 1.3:-16232511 | MS.gene63009:CDS |
| TCGCGATGGTGTGTTCAAGA+AGG | 0.610256 | 1.3:-16236719 | MS.gene63009:intron |
| TATCCTTGAACTAGCAGCTG+AGG | 0.611422 | 1.3:-16237017 | MS.gene63009:intron |
| ATATCTAGCATACTTGCCAA+TGG | 0.611559 | 1.3:-16237044 | MS.gene63009:CDS |
| GGAATGAGATGGTTCTACAC+TGG | 0.616046 | 1.3:-16233994 | MS.gene63009:CDS |
| GACATTGTTAAACTGCAGCA+TGG | 0.618080 | 1.3:-16233916 | MS.gene63009:CDS |
| CTCTAAAGAAGAAAGCATCA+AGG | 0.618470 | 1.3:-16233193 | MS.gene63009:CDS |
| TCTACACTGGTGACATAGGG+AGG | 0.620080 | 1.3:-16233981 | MS.gene63009:CDS |
| ATAAATGAGCAAGGAAGAGG+AGG | 0.620903 | 1.3:+16234970 | None:intergenic |
| GAGGTCACGACAGTAATTTG+TGG | 0.621092 | 1.3:-16237840 | MS.gene63009:CDS |
| GGTGTTGTTAGGTTTGCTAG+TGG | 0.622277 | 1.3:-16239380 | MS.gene63009:CDS |
| CTTACAGAGACTTGTGCTGG+TGG | 0.623479 | 1.3:-16235036 | MS.gene63009:CDS |
| TGATAACTGCAACATCAGCT+GGG | 0.625199 | 1.3:+16237634 | None:intergenic |
| AAGGAAATGGAGAAGAGTGG+TGG | 0.626690 | 1.3:-16239476 | MS.gene63009:CDS |
| CATACGGAGAGATTACTGTT+GGG | 0.628004 | 1.3:-16239518 | MS.gene63009:CDS |
| CTTGCTTGATGTATCTGTGA+GGG | 0.628466 | 1.3:+16236822 | None:intergenic |
| CAACAGATGAGGCATCAGAT+GGG | 0.637208 | 1.3:+16237736 | None:intergenic |
| AATGACTCGCCAATGCCTCG+TGG | 0.642641 | 1.3:-16234427 | MS.gene63009:CDS |
| TGAAGCCCATTCTTCCAATG+TGG | 0.643581 | 1.3:+16233254 | None:intergenic |
| TCTTGCTTGATGTATCTGTG+AGG | 0.651294 | 1.3:+16236821 | None:intergenic |
| CCAGCCGTGTCCAACAGATG+AGG | 0.653025 | 1.3:+16237725 | None:intergenic |
| ACATTATATTGTCCACATAG+GGG | 0.657865 | 1.3:+16233331 | None:intergenic |
| AGTGAAACGTGTGATATGCA+TGG | 0.659671 | 1.3:-16237769 | MS.gene63009:CDS |
| GATTACAAACCTGAAGAGCA+AGG | 0.659813 | 1.3:+16239288 | None:intergenic |
| ACTAACCACCCCAAACGCCG+TGG | 0.661661 | 1.3:-16239671 | MS.gene63009:CDS |
| GATGCCTCATCTGTTGGACA+CGG | 0.661876 | 1.3:-16237729 | MS.gene63009:CDS |
| CGGAGTTTACTGGAACTCCA+CGG | 0.663555 | 1.3:+16239654 | None:intergenic |
| CACACCGCCTTGATCGTCCG+CGG | 0.663810 | 1.3:+16239634 | None:intergenic |
| ATCAAGGCGGTGTGACAGTG+CGG | 0.666236 | 1.3:-16239625 | MS.gene63009:CDS |
| AAAGACAAAAGAATCATACA+AGG | 0.668435 | 1.3:-16234350 | MS.gene63009:intron |
| AAGGAAGAGGAGGTCCAACA+CGG | 0.670202 | 1.3:+16234980 | None:intergenic |
| ATCCGTTTCATACTGTCTGG+CGG | 0.670954 | 1.3:-16236110 | MS.gene63009:CDS |
| TGCTGAGTATCACCAGAAAG+GGG | 0.679172 | 1.3:+16236083 | None:intergenic |
| ATGGGAAGGAGTGAGTACAT+TGG | 0.682317 | 1.3:-16239570 | MS.gene63009:CDS |
| CCAATTACAATTTCTCCACG+AGG | 0.687033 | 1.3:+16234412 | None:intergenic |
| ATGTAGGTGAATGCAACGGG+AGG | 0.694846 | 1.3:-16236275 | MS.gene63009:intron |
| TACGGAACAGGAGAGTTGCG+AGG | 0.702350 | 1.3:+16239693 | None:intergenic |
| GATTAAGAAAGGAACAAAGG+GGG | 0.703898 | 1.3:-16236800 | MS.gene63009:CDS |
| AGATTAAGAAAGGAACAAAG+GGG | 0.717002 | 1.3:-16236801 | MS.gene63009:CDS |
| TAAAGAAGAAAGCATCAAGG+AGG | 0.735856 | 1.3:-16233190 | MS.gene63009:CDS |
| TGGAGTTCCAGTAAACTCCG+CGG | 0.773211 | 1.3:-16239651 | MS.gene63009:CDS |
| AACTCCGCGGACGATCAAGG+CGG | 0.776940 | 1.3:-16239638 | MS.gene63009:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 16232461 | 16239750 | 16232461 | ID=MS.gene63009 |
| chr1.3 | mRNA | 16232461 | 16239750 | 16232461 | ID=MS.gene63009.t1;Parent=MS.gene63009 |
| chr1.3 | exon | 16239298 | 16239750 | 16239298 | ID=MS.gene63009.t1.exon1;Parent=MS.gene63009.t1 |
| chr1.3 | CDS | 16239298 | 16239750 | 16239298 | ID=cds.MS.gene63009.t1;Parent=MS.gene63009.t1 |
| chr1.3 | exon | 16237996 | 16238076 | 16237996 | ID=MS.gene63009.t1.exon2;Parent=MS.gene63009.t1 |
| chr1.3 | CDS | 16237996 | 16238076 | 16237996 | ID=cds.MS.gene63009.t1;Parent=MS.gene63009.t1 |
| chr1.3 | exon | 16237602 | 16237865 | 16237602 | ID=MS.gene63009.t1.exon3;Parent=MS.gene63009.t1 |
| chr1.3 | CDS | 16237602 | 16237865 | 16237602 | ID=cds.MS.gene63009.t1;Parent=MS.gene63009.t1 |
| chr1.3 | exon | 16237018 | 16237149 | 16237018 | ID=MS.gene63009.t1.exon4;Parent=MS.gene63009.t1 |
| chr1.3 | CDS | 16237018 | 16237149 | 16237018 | ID=cds.MS.gene63009.t1;Parent=MS.gene63009.t1 |
| chr1.3 | exon | 16236720 | 16236893 | 16236720 | ID=MS.gene63009.t1.exon5;Parent=MS.gene63009.t1 |
| chr1.3 | CDS | 16236720 | 16236893 | 16236720 | ID=cds.MS.gene63009.t1;Parent=MS.gene63009.t1 |
| chr1.3 | exon | 16236062 | 16236291 | 16236062 | ID=MS.gene63009.t1.exon6;Parent=MS.gene63009.t1 |
| chr1.3 | CDS | 16236062 | 16236291 | 16236062 | ID=cds.MS.gene63009.t1;Parent=MS.gene63009.t1 |
| chr1.3 | exon | 16234966 | 16235083 | 16234966 | ID=MS.gene63009.t1.exon7;Parent=MS.gene63009.t1 |
| chr1.3 | CDS | 16234966 | 16235083 | 16234966 | ID=cds.MS.gene63009.t1;Parent=MS.gene63009.t1 |
| chr1.3 | exon | 16234351 | 16234482 | 16234351 | ID=MS.gene63009.t1.exon8;Parent=MS.gene63009.t1 |
| chr1.3 | CDS | 16234351 | 16234482 | 16234351 | ID=cds.MS.gene63009.t1;Parent=MS.gene63009.t1 |
| chr1.3 | exon | 16233894 | 16234028 | 16233894 | ID=MS.gene63009.t1.exon9;Parent=MS.gene63009.t1 |
| chr1.3 | CDS | 16233894 | 16234028 | 16233894 | ID=cds.MS.gene63009.t1;Parent=MS.gene63009.t1 |
| chr1.3 | exon | 16233170 | 16233376 | 16233170 | ID=MS.gene63009.t1.exon10;Parent=MS.gene63009.t1 |
| chr1.3 | CDS | 16233170 | 16233376 | 16233170 | ID=cds.MS.gene63009.t1;Parent=MS.gene63009.t1 |
| chr1.3 | exon | 16232461 | 16232628 | 16232461 | ID=MS.gene63009.t1.exon11;Parent=MS.gene63009.t1 |
| chr1.3 | CDS | 16232461 | 16232628 | 16232461 | ID=cds.MS.gene63009.t1;Parent=MS.gene63009.t1 |
| Gene Sequence |
| Protein sequence |
