AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene048924

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048924.t1 MTR_8g099420 97.572 659 16 0 1 659 1 659 0.0 1340
MS.gene048924.t1 MTR_5g009350 76.748 658 152 1 1 658 1 657 0.0 1092
MS.gene048924.t1 MTR_5g009350 76.888 649 149 1 1 649 1 648 0.0 1077
MS.gene048924.t1 MTR_5g009360 75.382 654 161 0 5 658 4 657 0.0 1070
MS.gene048924.t1 MTR_5g009350 74.866 561 140 1 1 561 1 560 0.0 910
MS.gene048924.t1 MTR_5g009350 76.417 547 128 1 1 547 1 546 0.0 907
MS.gene048924.t1 MTR_5g009360 74.856 521 131 0 138 658 11 531 0.0 845
MS.gene048924.t1 MTR_4g068670 57.121 653 278 2 7 659 5 655 0.0 798
MS.gene048924.t1 MTR_1g034360 56.881 654 280 2 7 659 5 657 0.0 793
MS.gene048924.t1 MTR_7g109830 51.376 654 318 0 5 658 2 655 0.0 699
MS.gene048924.t1 MTR_1g086600 49.466 655 329 1 5 657 24 678 0.0 672
MS.gene048924.t1 MTR_1g104810 40.523 612 349 8 49 656 18 618 4.37e-152 454
MS.gene048924.t1 MTR_1g104810 40.650 615 350 8 46 656 82 685 1.11e-151 455
MS.gene048924.t1 MTR_3g082660 30.885 667 417 12 25 655 68 726 1.22e-94 308
MS.gene048924.t1 MTR_1g030290 30.640 656 401 12 42 657 55 696 1.48e-93 304
MS.gene048924.t1 MTR_3g087980 30.247 648 409 11 42 655 54 692 4.70e-90 295
MS.gene048924.t1 MTR_3g084450 25.224 670 409 22 49 656 81 720 1.98e-41 161
MS.gene048924.t1 MTR_3g084470 24.925 670 414 23 46 656 76 715 3.36e-39 154
MS.gene048924.t1 MTR_8g083170 23.238 667 428 22 49 656 83 724 2.56e-35 142
MS.gene048924.t1 MTR_3g084450 26.195 481 291 14 221 656 51 512 1.32e-34 138
MS.gene048924.t1 MTR_1g063110 24.862 362 205 15 194 541 158 466 5.04e-23 103
MS.gene048924.t1 MTR_5g007640 26.559 497 244 20 78 540 95 504 1.79e-20 96.3
MS.gene048924.t1 MTR_4g057730 28.402 338 174 16 216 541 179 460 5.97e-20 94.4
MS.gene048924.t1 MTR_4g057730 28.107 338 175 15 216 541 179 460 8.85e-20 93.2
MS.gene048924.t1 MTR_3g035130 22.470 494 294 16 41 523 1 416 4.29e-19 91.3
MS.gene048924.t1 MTR_3g035130 22.470 494 294 16 41 523 1 416 4.39e-19 91.3
MS.gene048924.t1 MTR_2g095510 27.042 355 182 16 203 541 164 457 6.72e-19 90.9
MS.gene048924.t1 MTR_4g057730 27.273 319 167 13 216 523 179 443 8.05e-19 90.1
MS.gene048924.t1 MTR_1g063120 24.065 428 245 16 216 632 187 545 1.48e-18 90.1
MS.gene048924.t1 MTR_1g026310 25.000 312 171 11 222 523 203 461 2.08e-18 89.7
MS.gene048924.t1 MTR_2g095510 26.347 334 176 14 203 523 164 440 3.17e-18 88.2
MS.gene048924.t1 MTR_1g090737 26.761 355 182 15 204 541 191 484 4.61e-18 88.6
MS.gene048924.t1 MTR_3g064420 22.563 554 298 22 81 589 41 508 6.59e-18 88.2
MS.gene048924.t1 MTR_5g027480 26.912 353 191 13 214 552 185 484 9.47e-18 87.4
MS.gene048924.t1 MTR_8g039720 26.861 309 171 10 221 523 205 464 2.29e-17 86.3
MS.gene048924.t1 MTR_3g460770 25.905 359 203 14 203 550 162 468 4.23e-17 85.5
MS.gene048924.t1 MTR_4g005750 22.699 489 285 15 81 550 54 468 7.61e-17 84.7
MS.gene048924.t1 MTR_2g105570 22.921 493 297 17 65 541 41 466 1.64e-16 83.6
MS.gene048924.t1 MTR_8g074120 25.000 448 244 20 126 547 40 421 2.65e-16 82.8
MS.gene048924.t1 MTR_3g088870 25.627 359 209 11 176 523 148 459 8.21e-15 78.2
MS.gene048924.t1 MTR_5g023730 21.676 549 346 17 66 596 32 514 6.50e-14 75.5
MS.gene048924.t1 MTR_1g073180 31.818 154 100 5 387 538 321 471 8.00e-12 68.6
MS.gene048924.t1 MTR_1g073180 31.818 154 100 5 387 538 299 449 9.36e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene048924.t1 AT4G23850 70.472 657 194 0 1 657 1 657 0.0 1014
MS.gene048924.t1 AT4G11030 70.258 659 196 0 1 659 1 659 0.0 1006
MS.gene048924.t1 AT1G64400 67.278 654 213 1 7 659 6 659 0.0 957
MS.gene048924.t1 AT1G49430 53.211 654 304 2 8 659 8 661 0.0 746
MS.gene048924.t1 AT2G47240 48.773 652 334 0 5 656 2 653 0.0 662
MS.gene048924.t1 AT2G47240 48.773 652 334 0 5 656 2 653 0.0 662
MS.gene048924.t1 AT2G47240 48.773 652 334 0 5 656 2 653 0.0 662
MS.gene048924.t1 AT2G47240 49.327 594 301 0 63 656 1 594 0.0 610
MS.gene048924.t1 AT1G49430 49.495 495 249 1 8 501 8 502 0.0 530
MS.gene048924.t1 AT5G27600 41.509 636 354 10 27 655 63 687 8.16e-158 471
MS.gene048924.t1 AT3G05970 40.843 617 350 8 44 656 83 688 1.62e-149 450
MS.gene048924.t1 AT2G04350 31.618 680 395 14 25 655 61 719 2.69e-101 325
MS.gene048924.t1 AT2G04350 31.618 680 395 14 25 655 61 719 2.69e-101 325
MS.gene048924.t1 AT1G77590 30.746 657 391 14 42 655 55 690 3.43e-90 295
MS.gene048924.t1 AT1G77590 32.973 555 340 11 121 655 2 544 2.20e-84 276
MS.gene048924.t1 AT3G23790 25.484 671 404 26 49 656 85 722 2.14e-40 158
MS.gene048924.t1 AT4G14070 25.143 700 418 28 18 655 71 726 1.61e-37 149
MS.gene048924.t1 AT4G19010 29.787 329 179 11 218 541 199 480 8.14e-22 100
MS.gene048924.t1 AT1G51680 25.819 519 264 19 55 540 48 478 2.46e-20 95.1
MS.gene048924.t1 AT1G51680 25.819 519 264 19 55 540 48 478 2.61e-20 95.5
MS.gene048924.t1 AT1G51680 25.819 519 264 19 55 540 48 478 4.07e-20 94.7
MS.gene048924.t1 AT3G21240 28.739 341 169 14 217 540 188 471 5.29e-20 94.7
MS.gene048924.t1 AT3G21240 28.739 341 169 14 217 540 188 471 6.09e-20 94.0
MS.gene048924.t1 AT3G21240 28.739 341 169 14 217 540 188 471 6.09e-20 94.0
MS.gene048924.t1 AT1G66120 24.954 545 294 25 51 565 20 479 1.45e-19 93.2
MS.gene048924.t1 AT4G05160 27.920 351 190 15 199 540 165 461 9.34e-19 90.5
MS.gene048924.t1 AT2G47245 41.935 93 54 0 6 98 36 128 1.62e-17 79.7
MS.gene048924.t1 AT1G20500 25.309 324 185 12 222 540 196 467 2.83e-17 85.9
MS.gene048924.t1 AT1G20480 27.160 324 178 13 222 540 212 482 4.12e-15 79.3
MS.gene048924.t1 AT5G63380 25.758 330 192 11 222 547 203 483 1.21e-13 74.7
MS.gene048924.t1 AT5G38120 25.287 435 228 19 222 646 198 545 3.69e-13 72.8
MS.gene048924.t1 AT1G62940 25.762 361 202 16 203 550 160 467 3.38e-12 69.7
MS.gene048924.t1 AT3G21230 34.783 161 97 7 386 541 329 486 8.85e-12 68.6
MS.gene048924.t1 AT3G21230 35.000 160 96 7 387 541 330 486 9.05e-12 68.6
MS.gene048924.t1 AT3G21230 35.000 160 96 7 387 541 330 486 1.25e-11 67.8

Find 161 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGACCTCCTTTACCATATT+TGG 0.156596 4.2:+4457436 MS.gene048924:CDS
AATACAAGTTTGTCCATTAA+TGG 0.197163 4.2:-4456990 None:intergenic
AACATTATTACACTCTTATC+TGG 0.199872 4.2:+4455745 MS.gene048924:CDS
TCCATTCGTGCTTGTGGTTA+TGG 0.243465 4.2:+4453565 MS.gene048924:CDS
TATGACTTGGTGATCAAAAT+TGG 0.249377 4.2:+4453538 MS.gene048924:CDS
AAGAGGAGAAATCTGTATTA+AGG 0.259788 4.2:+4457514 MS.gene048924:CDS
TTGACAGAAAAGATTAATAA+TGG 0.263355 4.2:+4456736 MS.gene048924:CDS
GGAGTAAAATGCGGCATTTA+TGG 0.277750 4.2:+4454386 MS.gene048924:CDS
TCCAAACACACTTCCAAATA+TGG 0.279040 4.2:-4457449 None:intergenic
CAAAGATGGTAGGCCATCTA+TGG 0.282205 4.2:+4452342 MS.gene048924:CDS
GTTCCTTTATATGATACTTT+AGG 0.288914 4.2:+4454885 MS.gene048924:CDS
GATCAGGTAAAACAAGCTTT+AGG 0.291395 4.2:+4457122 MS.gene048924:intron
TCTTCAAGTGCTTTCTTGCT+TGG 0.295970 4.2:-4458073 None:intergenic
AGTGCATCATATCCCATTTC+AGG 0.308365 4.2:-4457479 None:intergenic
TTGTTTCAGATATGGATCTA+TGG 0.308753 4.2:+4458013 MS.gene048924:intron
CTTCAAGTGCTTTCTTGCTT+GGG 0.325012 4.2:-4458072 None:intergenic
TGAAACGGCAGCTCCATTAA+TGG 0.329839 4.2:+4456977 MS.gene048924:CDS
CCATTCGTGCTTGTGGTTAT+GGG 0.333564 4.2:+4453566 MS.gene048924:CDS
GTGGTGCTGCAATAGGTTTC+TGG 0.337284 4.2:+4456233 MS.gene048924:CDS
CATAGATGGCCTACCATCTT+TGG 0.340044 4.2:-4452341 None:intergenic
TTGAGATACTCTGCTGCCTT+TGG 0.342904 4.2:-4455194 None:intergenic
CCAAGCATATTTATTTCGTT+TGG 0.345668 4.2:-4457407 None:intergenic
GCTCATATCTTACAAGGATA+TGG 0.350220 4.2:+4457224 MS.gene048924:CDS
ACAGATTTCTCCTCTTGGTT+TGG 0.353378 4.2:-4457507 None:intergenic
ATCAGGTAAAACAAGCTTTA+GGG 0.354022 4.2:+4457123 MS.gene048924:intron
TGACAGAAAAGATTAATAAT+GGG 0.357421 4.2:+4456737 MS.gene048924:CDS
TGAAACAGACGATGTTCAAT+TGG 0.360475 4.2:+4456767 MS.gene048924:CDS
CGACCCAGCATTGGATTTGT+TGG 0.367544 4.2:-4453374 None:intergenic
ACCATATTTGGAAGTGTGTT+TGG 0.368130 4.2:+4457448 MS.gene048924:CDS
ATAAAGTCCATGAGCATTGC+AGG 0.376947 4.2:-4454859 None:intergenic
TCCATCAATCATAACCTCTT+TGG 0.384969 4.2:-4457579 None:intergenic
GCAAGAAAGCACTTGAAGAT+TGG 0.395350 4.2:+4458077 MS.gene048924:CDS
ACCAAAGAGGTTATGATTGA+TGG 0.395883 4.2:+4457578 MS.gene048924:CDS
CACTTGCACACATCTTTGAC+AGG 0.399229 4.2:+4456185 MS.gene048924:CDS
ATCTATTAAACAGGAGATAT+CGG 0.400047 4.2:+4457686 MS.gene048924:intron
TTTGGAGTCTGTACCTGAAA+TGG 0.402444 4.2:+4457466 MS.gene048924:CDS
AGCAAGAAGTTGAGAAGATC+GGG 0.409532 4.2:+4455347 MS.gene048924:CDS
ATACCTAAAGTATCATATAA+AGG 0.411632 4.2:-4454888 None:intergenic
ATCTCTCCTCCTCCCATTGA+AGG 0.413564 4.2:+4452397 MS.gene048924:CDS
CATTTATGGTGCCAATTGTC+CGG 0.414011 4.2:+4454400 MS.gene048924:CDS
ATATGGAGTGGTGCTGCAAT+AGG 0.415085 4.2:+4456226 MS.gene048924:CDS
ATCGGAGAGTGGCAACCTAA+TGG 0.419480 4.2:+4457704 MS.gene048924:CDS
TGTGTAGCAATTGTGAGCTT+TGG 0.422578 4.2:+4455304 MS.gene048924:intron
CATAATCCATTCCGGACAAT+TGG 0.424577 4.2:-4454411 None:intergenic
CAAGAAAGCACTTGAAGATT+GGG 0.431537 4.2:+4458078 MS.gene048924:CDS
AAGGCGAAACATTACATACT+TGG 0.431539 4.2:+4458151 MS.gene048924:CDS
CGTTCCATGTCAAATGGAAC+TGG 0.435440 4.2:-4458356 None:intergenic
TCCATGCTCATAATCCATTC+CGG 0.452071 4.2:-4454419 None:intergenic
AGAGGAGAAATCTGTATTAA+GGG 0.455958 4.2:+4457515 MS.gene048924:CDS
CTGCAATAGGTTTCTGGCGA+GGG 0.458363 4.2:+4456239 MS.gene048924:CDS
CATTCCCATTCACTATTTCA+CGG 0.460333 4.2:-4453397 None:intergenic
TAATTTAGGTGCCGGGGCTG+TGG 0.461327 4.2:+4454979 MS.gene048924:intron
AATAAATATGCTTGGTATGG+TGG 0.462971 4.2:+4457415 MS.gene048924:CDS
CCTTCGACATGTTTCGATAG+AGG 0.465301 4.2:-4457179 None:intergenic
GCAGGATATCAAATTGTTGA+TGG 0.465544 4.2:+4456410 MS.gene048924:intron
ATTGGATATCAATACTCCCT+TGG 0.466623 4.2:-4455719 None:intergenic
CGATACACAGGACCCATAGA+TGG 0.469476 4.2:-4452355 None:intergenic
AGATCACGTTCCATGTCAAA+TGG 0.469962 4.2:-4458362 None:intergenic
CTTGAACATAAATATTCTCC+AGG 0.470779 4.2:-4457799 None:intergenic
CGAAATAAATATGCTTGGTA+TGG 0.474332 4.2:+4457412 MS.gene048924:CDS
GTTTGCCACTTGAATTTGCC+AGG 0.476179 4.2:-4453502 None:intergenic
TTGGATATCAATACTCCCTT+GGG 0.479790 4.2:-4455718 None:intergenic
ACATGTATCGAGACCTTCAA+TGG 0.481926 4.2:-4452410 None:intergenic
TTAATACAGATTTCTCCTCT+TGG 0.482345 4.2:-4457512 None:intergenic
TTCAACCGAAAGAACCTGTA+TGG 0.482850 4.2:-4457607 None:intergenic
ATTGATGGATGGTTCCATAC+AGG 0.485921 4.2:+4457593 MS.gene048924:CDS
GAAACAGACGATGTTCAATT+GGG 0.488745 4.2:+4456768 MS.gene048924:CDS
GAGTGTAATAATGTTCTCAT+TGG 0.496079 4.2:-4455737 None:intergenic
CGGGGTGAAAATATATTTGT+GGG 0.499061 4.2:+4455366 MS.gene048924:CDS
ATTTCACGGCGACCCAGCAT+TGG 0.501659 4.2:-4453383 None:intergenic
ATGTACACAAGTGGAACAAC+CGG 0.501819 4.2:+4455691 MS.gene048924:CDS
GGTCGCCGTGAAATAGTGAA+TGG 0.503886 4.2:+4453392 MS.gene048924:CDS
TTCGTTTGGTATTGTTACAA+AGG 0.505019 4.2:-4457393 None:intergenic
AAGCAAGAAGTTGAGAAGAT+CGG 0.505418 4.2:+4455346 MS.gene048924:CDS
TTCTCTCTGTGAAGATTCAA+AGG 0.507257 4.2:+4458132 MS.gene048924:CDS
AAAGATTGCGAAGGAAAAGA+AGG 0.508450 4.2:+4458183 MS.gene048924:CDS
TCGGGGTGAAAATATATTTG+TGG 0.508979 4.2:+4455365 MS.gene048924:CDS
CAATACTCCCTTGGGATCAC+CGG 0.513756 4.2:-4455710 None:intergenic
TGAAGGTCTCGATACATGTT+GGG 0.514347 4.2:+4452414 MS.gene048924:CDS
TTTCAGGCCTGCAATGCTCA+TGG 0.519473 4.2:+4454852 MS.gene048924:intron
TCTGGGATGAAGCAGATACT+AGG 0.520971 4.2:+4455763 MS.gene048924:CDS
CACACTTCCAAATATGGTAA+AGG 0.521446 4.2:-4457443 None:intergenic
GTATCCAACAAATCCAATGC+TGG 0.523005 4.2:+4453370 MS.gene048924:CDS
GGACAAACTTGTATTCAGTA+AGG 0.526680 4.2:+4456998 MS.gene048924:CDS
ATGACTTGGTGATCAAAATT+GGG 0.527547 4.2:+4453539 MS.gene048924:CDS
TTGGAGTCTGTACCTGAAAT+GGG 0.528444 4.2:+4457467 MS.gene048924:CDS
CAAATGTTAATTTAGGTGCC+GGG 0.528739 4.2:+4454972 MS.gene048924:intron
ACATTATTACACTCTTATCT+GGG 0.532870 4.2:+4455746 MS.gene048924:CDS
GGGAAGTCCATTCGTGCTTG+TGG 0.535853 4.2:+4453559 MS.gene048924:CDS
CCCATAACCACAAGCACGAA+TGG 0.537258 4.2:-4453566 None:intergenic
CATTCGTGCTTGTGGTTATG+GGG 0.538296 4.2:+4453567 MS.gene048924:CDS
TTGAAGGTCTCGATACATGT+TGG 0.538408 4.2:+4452413 MS.gene048924:CDS
ATGGTGCCAATTGTCCGGAA+TGG 0.539782 4.2:+4454405 MS.gene048924:CDS
CCAAACGAAATAAATATGCT+TGG 0.541853 4.2:+4457407 MS.gene048924:CDS
ATAAATATGCTTGGTATGGT+GGG 0.541863 4.2:+4457416 MS.gene048924:CDS
AAAGCTAGAGATGCCAAAGA+TGG 0.548876 4.2:+4452328 MS.gene048924:CDS
GACAGAAAAGATTAATAATG+GGG 0.550091 4.2:+4456738 MS.gene048924:CDS
GGTCTTACTGAAACATGTGC+TGG 0.553884 4.2:+4457368 MS.gene048924:intron
CTTTGACAGGATTATTGAAG+AGG 0.554806 4.2:+4456198 MS.gene048924:CDS
ATATGTTGCTGTTGAAAACC+TGG 0.555433 4.2:+4457781 MS.gene048924:CDS
TGGAACAACCGGTGATCCCA+AGG 0.559190 4.2:+4455702 MS.gene048924:CDS
TGATCCAGTTCCATTTGACA+TGG 0.562355 4.2:+4458352 MS.gene048924:CDS
TCCGGAATGGATTATGAGCA+TGG 0.562688 4.2:+4454418 MS.gene048924:CDS
ACTTGTGCTCATATCTTACA+AGG 0.571352 4.2:+4457218 MS.gene048924:CDS
TTTGACAGGATTATTGAAGA+GGG 0.573469 4.2:+4456199 MS.gene048924:CDS
CTGTCAAAGATGTGTGCAAG+TGG 0.575736 4.2:-4456184 None:intergenic
TTGCAGCAAGTTGCATAGCA+TGG 0.578506 4.2:+4456938 MS.gene048924:intron
TCTATCAAGCACACGGGGAA+CGG 0.579381 4.2:-4456469 None:intergenic
TATCCAACAAATCCAATGCT+GGG 0.580274 4.2:+4453371 MS.gene048924:CDS
GTCGCCGTGAAATAGTGAAT+GGG 0.585588 4.2:+4453393 MS.gene048924:CDS
AATCTGTATTAAGGGTGGTA+CGG 0.586331 4.2:+4457523 MS.gene048924:CDS
AAGTTGCATAGCATGGAAAG+AGG 0.589758 4.2:+4456945 MS.gene048924:CDS
TCAAGCAAATGATATGAAGA+TGG 0.591630 4.2:+4458102 MS.gene048924:CDS
TATAACAAACTCCACAGCCC+CGG 0.592002 4.2:-4454990 None:intergenic
AAAGATGGTAGGCCATCTAT+GGG 0.593009 4.2:+4452343 MS.gene048924:CDS
TCGAGACCTTCAATGGGAGG+AGG 0.593915 4.2:-4452403 None:intergenic
GCTATTGAAGACATTTCCAA+AGG 0.599427 4.2:+4455178 MS.gene048924:intron
CATGTATCGAGACCTTCAAT+GGG 0.600238 4.2:-4452409 None:intergenic
AGTTGCATAGCATGGAAAGA+GGG 0.608259 4.2:+4456946 MS.gene048924:CDS
TGTACGATAATGTACACAAG+TGG 0.608897 4.2:+4455682 MS.gene048924:CDS
GCTGCAATAGGTTTCTGGCG+AGG 0.609644 4.2:+4456238 MS.gene048924:CDS
AAGAGGTTATGATTGATGGA+TGG 0.610516 4.2:+4457582 MS.gene048924:CDS
TTATTGAAGAGGGAATCATA+TGG 0.611911 4.2:+4456209 MS.gene048924:CDS
GTATCGTAGCTGTTTCACTA+AGG 0.612811 4.2:+4452372 MS.gene048924:CDS
ACAGAAAAGATTAATAATGG+GGG 0.613428 4.2:+4456739 MS.gene048924:CDS
AAATGTTAATTTAGGTGCCG+GGG 0.619376 4.2:+4454973 MS.gene048924:intron
AATATATTTAAGCTTTCACA+AGG 0.619823 4.2:+4457755 MS.gene048924:CDS
AGATAAATCATTCATCGTTG+AGG 0.621996 4.2:+4452300 MS.gene048924:CDS
GTTTGTTATATCTCATGCAG+AGG 0.622041 4.2:+4455003 MS.gene048924:CDS
CTAGAGATGCCAAAGATGGT+AGG 0.622804 4.2:+4452332 MS.gene048924:CDS
TGCAATAGGTTTCTGGCGAG+GGG 0.623396 4.2:+4456240 MS.gene048924:CDS
ACGTGAAGACCTCACCAAAG+AGG 0.625025 4.2:+4457565 MS.gene048924:CDS
ACTTCCAAATATGGTAAAGG+AGG 0.625367 4.2:-4457440 None:intergenic
TCAGGTAAAACAAGCTTTAG+GGG 0.625708 4.2:+4457124 MS.gene048924:intron
GTGAAACAGCTACGATACAC+AGG 0.631708 4.2:-4452367 None:intergenic
AGAGCTCTTAAAGATTGCGA+AGG 0.638312 4.2:+4458174 MS.gene048924:CDS
CAATCATAACCTCTTTGGTG+AGG 0.639766 4.2:-4457574 None:intergenic
CAAAGATGTGTGCAAGTGGA+AGG 0.647303 4.2:-4456180 None:intergenic
TTACAAAGAAGTGTATGACT+TGG 0.648434 4.2:+4453525 MS.gene048924:CDS
TGTAGCCTGGCAAATTCAAG+TGG 0.648485 4.2:+4453497 MS.gene048924:intron
TGTACACTCTATCAAGCACA+CGG 0.649605 4.2:-4456476 None:intergenic
TTGGGTTAACAACAGCGACA+AGG 0.651672 4.2:-4458054 None:intergenic
CAGGTAAAACAAGCTTTAGG+GGG 0.652277 4.2:+4457125 MS.gene048924:intron
GAAGAGGGAATCATATGGAG+TGG 0.653221 4.2:+4456214 MS.gene048924:CDS
GGAGAAATCTGTATTAAGGG+TGG 0.664225 4.2:+4457518 MS.gene048924:CDS
CCTCTATCGAAACATGTCGA+AGG 0.667299 4.2:+4457179 MS.gene048924:CDS
ACACGTTACTTACTATGTGT+AGG 0.669505 4.2:-4456791 None:intergenic
GGAACAACCGGTGATCCCAA+GGG 0.672635 4.2:+4455703 MS.gene048924:CDS
GCACTTGCAACCAAACCAAG+AGG 0.675688 4.2:+4457497 MS.gene048924:CDS
GCAGTTGCTTAAGTACTACC+AGG 0.676803 4.2:+4458415 MS.gene048924:CDS
AAACAGGAGATATCGGAGAG+TGG 0.676905 4.2:+4457693 MS.gene048924:intron
GTATCGAGACCTTCAATGGG+AGG 0.679829 4.2:-4452406 None:intergenic
TGAAGAAAAGAAGATACCTG+AGG 0.695780 4.2:+4455042 MS.gene048924:CDS
CATTGACGAGATGTACAAGA+CGG 0.697605 4.2:+4458737 MS.gene048924:CDS
TACACTCTATCAAGCACACG+GGG 0.700121 4.2:-4456474 None:intergenic
GTGCTTGATAGAGTGTACAC+AGG 0.706474 4.2:+4456480 MS.gene048924:CDS
GAGCACAAGTCACAACACGC+AGG 0.710027 4.2:-4457205 None:intergenic
TGGTAGTACTTAAGCAACTG+CGG 0.711513 4.2:-4458413 None:intergenic
GTACACTCTATCAAGCACAC+GGG 0.715609 4.2:-4456475 None:intergenic
GCAAGAAGTTGAGAAGATCG+GGG 0.748481 4.2:+4455348 MS.gene048924:CDS
GGAATGGATTATGAGCATGG+AGG 0.791685 4.2:+4454421 MS.gene048924:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAATTTATGTTTTACA+TGG - chr4.2:4452868-4452887 None:intergenic 10.0%
!! TTGGAAAATAAATATTAAAG+TGG - chr4.2:4454955-4454974 None:intergenic 15.0%
!! TTTCATTGCATTATTATTAT+TGG - chr4.2:4456689-4456708 None:intergenic 15.0%
!!! AAAAAATGAAATAGCATTTT+AGG - chr4.2:4456091-4456110 None:intergenic 15.0%
!!! AAATATTTGACTTAAGTTAT+CGG - chr4.2:4453999-4454018 None:intergenic 15.0%
!!! AATTAGAAAGATATTTTATG+GGG - chr4.2:4458586-4458605 None:intergenic 15.0%
!!! ACATATTTTAAGATAATTTC+AGG + chr4.2:4454836-4454855 MS.gene048924:intron 15.0%
!!! ATATATATATTGCTTGTTTT+AGG + chr4.2:4454364-4454383 MS.gene048924:intron 15.0%
!!! GAATTAGAAAGATATTTTAT+GGG - chr4.2:4458587-4458606 None:intergenic 15.0%
!!! TAAAATGCTATTTCATTTTT+TGG + chr4.2:4456090-4456109 MS.gene048924:intron 15.0%
!!! TATATATATTGCTTGTTTTA+GGG + chr4.2:4454365-4454384 MS.gene048924:intron 15.0%
!!! TATTTTCCAAATGTTAATTT+AGG + chr4.2:4454965-4454984 MS.gene048924:intron 15.0%
!! AATATATTTAAGCTTTCACA+AGG + chr4.2:4457755-4457774 MS.gene048924:CDS 20.0%
!! ATTTGTTCTTATACAATGTT+TGG + chr4.2:4454708-4454727 MS.gene048924:intron 20.0%
!! GAGTTTCATAAAATATCATA+TGG + chr4.2:4453895-4453914 MS.gene048924:intron 20.0%
!! GGAATAAATAATCTAAACAA+TGG + chr4.2:4452960-4452979 MS.gene048924:intron 20.0%
!! GTAACAATAAATTTGCATAA+TGG - chr4.2:4453455-4453474 None:intergenic 20.0%
!! TATGCAAAAATAATCAGAAA+AGG - chr4.2:4453632-4453651 None:intergenic 20.0%
!! TGACAGAAAAGATTAATAAT+GGG + chr4.2:4456737-4456756 MS.gene048924:CDS 20.0%
!! TGAGAACTAATAGAAATAAT+CGG + chr4.2:4453800-4453819 MS.gene048924:intron 20.0%
!! TTGACAGAAAAGATTAATAA+TGG + chr4.2:4456736-4456755 MS.gene048924:CDS 20.0%
!! TTGATGTGATTATAGTATAT+TGG + chr4.2:4456310-4456329 MS.gene048924:intron 20.0%
!!! AAATTTTAACAAGTTATACC+TGG - chr4.2:4458436-4458455 None:intergenic 20.0%
!!! AATATTTGACTTAAGTTATC+GGG - chr4.2:4453998-4454017 None:intergenic 20.0%
!!! ATACCTAAAGTATCATATAA+AGG - chr4.2:4454891-4454910 None:intergenic 20.0%
!!! ATGAATTTGTTTTCCTTTAA+AGG + chr4.2:4457885-4457904 MS.gene048924:intron 20.0%
!!! ATTATTTCTATTAGTTCTCA+AGG - chr4.2:4453800-4453819 None:intergenic 20.0%
!!! ATTGTTTTATCGATATTTTG+TGG + chr4.2:4455573-4455592 MS.gene048924:intron 20.0%
!!! CAAAAGATTCTTTTTAAACA+TGG + chr4.2:4457324-4457343 MS.gene048924:intron 20.0%
!!! CAAAATGCTTTTACTTAAAT+GGG - chr4.2:4455890-4455909 None:intergenic 20.0%
!!! GAGAATTTTGAATTAGTTTT+TGG - chr4.2:4454206-4454225 None:intergenic 20.0%
!!! GGAATTAGAAAGATATTTTA+TGG - chr4.2:4458588-4458607 None:intergenic 20.0%
!!! GGTATAACTTGTTAAAATTT+TGG + chr4.2:4458436-4458455 MS.gene048924:intron 20.0%
!!! TATTTTCTTAACTCCTTTAA+AGG - chr4.2:4457901-4457920 None:intergenic 20.0%
!!! TCAAGAGATTTATTTTTCAA+AGG - chr4.2:4452717-4452736 None:intergenic 20.0%
!!! TGTCATTTATGTATTAGAAT+AGG + chr4.2:4452939-4452958 MS.gene048924:intron 20.0%
!!! TTTTCTGATTATTTTTGCAT+AGG + chr4.2:4453631-4453650 MS.gene048924:intron 20.0%
!!! TTTTTCTTTCATGTTCAAAA+TGG - chr4.2:4454646-4454665 None:intergenic 20.0%
! AAAAATGTACATACAACAAG+AGG + chr4.2:4453083-4453102 MS.gene048924:intron 25.0%
! AAAATGTACATACAACAAGA+GGG + chr4.2:4453084-4453103 MS.gene048924:intron 25.0%
! AAAGGAGTTAAGAAAATATG+TGG + chr4.2:4457903-4457922 MS.gene048924:intron 25.0%
! AACATTATTACACTCTTATC+TGG + chr4.2:4455745-4455764 MS.gene048924:CDS 25.0%
! AAGAGATGGAAATTAGAATA+AGG - chr4.2:4456647-4456666 None:intergenic 25.0%
! AATACAAGTTTGTCCATTAA+TGG - chr4.2:4456993-4457012 None:intergenic 25.0%
! AATCTTTCATTACTGAATGA+AGG + chr4.2:4456286-4456305 MS.gene048924:intron 25.0%
! ACAGAAAAGATTAATAATGG+GGG + chr4.2:4456739-4456758 MS.gene048924:CDS 25.0%
! ACATTATTACACTCTTATCT+GGG + chr4.2:4455746-4455765 MS.gene048924:CDS 25.0%
! AGTACTTCTAAACTATTCAA+AGG - chr4.2:4457857-4457876 None:intergenic 25.0%
! ATCTATTAAACAGGAGATAT+CGG + chr4.2:4457686-4457705 MS.gene048924:intron 25.0%
! ATTATATGGCAAAACCTAAA+CGG + chr4.2:4453947-4453966 MS.gene048924:intron 25.0%
! CAAGAAAAGATACTAATATG+AGG - chr4.2:4454323-4454342 None:intergenic 25.0%
! CGAATTAAGATTACTTTGAT+AGG + chr4.2:4452768-4452787 MS.gene048924:intron 25.0%
! CTGATAAATATACAACACAA+AGG - chr4.2:4454563-4454582 None:intergenic 25.0%
! GAAATAAATCAATCCAAACA+AGG + chr4.2:4454081-4454100 MS.gene048924:intron 25.0%
! GACAGAAAAGATTAATAATG+GGG + chr4.2:4456738-4456757 MS.gene048924:CDS 25.0%
! GAGAACTAATAGAAATAATC+GGG + chr4.2:4453801-4453820 MS.gene048924:intron 25.0%
! GTAAGACATGTTAAGTTAAA+AGG - chr4.2:4454818-4454837 None:intergenic 25.0%
! GTACTTCTAAACTATTCAAA+GGG - chr4.2:4457856-4457875 None:intergenic 25.0%
! GTTCCTTTATATGATACTTT+AGG + chr4.2:4454885-4454904 MS.gene048924:CDS 25.0%
! TAAAAGGAGCAAAAGAAAAT+TGG - chr4.2:4458634-4458653 None:intergenic 25.0%
! TGTGGAGTAATGATATTAAA+AGG + chr4.2:4457921-4457940 MS.gene048924:intron 25.0%
! TTAAACTGTTTATCCAAACA+TGG - chr4.2:4453657-4453676 None:intergenic 25.0%
! TTAAAGTGGTAACACAATAT+AGG - chr4.2:4454941-4454960 None:intergenic 25.0%
! TTCAAAATATTGTCAAACAG+CGG - chr4.2:4455983-4456002 None:intergenic 25.0%
! TTGAACATGAAAGAAAAACA+AGG + chr4.2:4454648-4454667 MS.gene048924:intron 25.0%
! TTTCGATTAGATCGAAATAT+CGG - chr4.2:4453163-4453182 None:intergenic 25.0%
! TTTGATTGAATGAATTTGCA+TGG + chr4.2:4452567-4452586 MS.gene048924:intron 25.0%
!! ATAATTTTCATGCTTCCATT+AGG - chr4.2:4457722-4457741 None:intergenic 25.0%
!! ATCTTTCTTTGTTTCAGATA+TGG + chr4.2:4458005-4458024 MS.gene048924:intron 25.0%
!! CCAAAATGCTTTTACTTAAA+TGG - chr4.2:4455891-4455910 None:intergenic 25.0%
!! TTAAACATGGACATGATTTT+TGG + chr4.2:4457337-4457356 MS.gene048924:intron 25.0%
!! TTGTTCTTTTTGTAGTTGAA+AGG + chr4.2:4458302-4458321 MS.gene048924:intron 25.0%
!! TTTTATCGATATTTTGTGGT+TGG + chr4.2:4455577-4455596 MS.gene048924:intron 25.0%
!!! AAGTAACGTGTTTTAAATGA+TGG + chr4.2:4456803-4456822 MS.gene048924:intron 25.0%
!!! AGTTTTTTAATGTATGTCAC+AGG + chr4.2:4455612-4455631 MS.gene048924:intron 25.0%
!!! ATTTGCATGGTTTTAAATTG+TGG + chr4.2:4452580-4452599 MS.gene048924:intron 25.0%
!!! ATTTTTTCACAAACATCACA+TGG - chr4.2:4456548-4456567 None:intergenic 25.0%
!!! CCATTTAAGTAAAAGCATTT+TGG + chr4.2:4455888-4455907 MS.gene048924:intron 25.0%
!!! GTTAGAGTTGATATACTTTT+TGG + chr4.2:4453042-4453061 MS.gene048924:intron 25.0%
!!! GTTTTTTAATGTATGTCACA+GGG + chr4.2:4455613-4455632 MS.gene048924:intron 25.0%
!!! TAATCTATACTTGTTGTTGT+TGG + chr4.2:4457637-4457656 MS.gene048924:intron 25.0%
!!! TTAGTTCTGATTGTTTTTGA+GGG + chr4.2:4453324-4453343 MS.gene048924:intron 25.0%
!!! TTTAGTTCTGATTGTTTTTG+AGG + chr4.2:4453323-4453342 MS.gene048924:intron 25.0%
!!! TTTATATTTCTAGCTTAGTC+TGG - chr4.2:4453973-4453992 None:intergenic 25.0%
AAGAGGAGAAATCTGTATTA+AGG + chr4.2:4457514-4457533 MS.gene048924:CDS 30.0%
AATAAATATGCTTGGTATGG+TGG + chr4.2:4457415-4457434 MS.gene048924:CDS 30.0%
AATAATACATTGCTACCACA+CGG - chr4.2:4455089-4455108 None:intergenic 30.0%
AATGGCAAAAATGAAAGAGA+GGG - chr4.2:4453437-4453456 None:intergenic 30.0%
AGAGAATAACAAAACAAAGG+CGG + chr4.2:4453866-4453885 MS.gene048924:intron 30.0%
AGAGGAGAAATCTGTATTAA+GGG + chr4.2:4457515-4457534 MS.gene048924:CDS 30.0%
AGATAAATCATTCATCGTTG+AGG + chr4.2:4452300-4452319 MS.gene048924:CDS 30.0%
ATAAATATGCTTGGTATGGT+GGG + chr4.2:4457416-4457435 MS.gene048924:CDS 30.0%
ATCAGGTAAAACAAGCTTTA+GGG + chr4.2:4457123-4457142 MS.gene048924:intron 30.0%
ATGACAAATTTGCAACAGAT+AGG - chr4.2:4455434-4455453 None:intergenic 30.0%
ATTGTTTGTTCGAATCAAGA+CGG - chr4.2:4457055-4457074 None:intergenic 30.0%
CAGAGAGAATAACAAAACAA+AGG + chr4.2:4453863-4453882 MS.gene048924:intron 30.0%
CATGTCATTGTTATCAATGT+AGG + chr4.2:4453838-4453857 MS.gene048924:intron 30.0%
CATTTCTTCACGTGTTAATT+TGG + chr4.2:4452539-4452558 MS.gene048924:intron 30.0%
CCAAACGAAATAAATATGCT+TGG + chr4.2:4457407-4457426 MS.gene048924:CDS 30.0%
CCAAGCATATTTATTTCGTT+TGG - chr4.2:4457410-4457429 None:intergenic 30.0%
CGAAATAAATATGCTTGGTA+TGG + chr4.2:4457412-4457431 MS.gene048924:CDS 30.0%
CTAAAATTGATCATCGCTAT+TGG - chr4.2:4454771-4454790 None:intergenic 30.0%
CTAATACATAAGCACCTATA+TGG - chr4.2:4453706-4453725 None:intergenic 30.0%
CTTGAACATAAATATTCTCC+AGG - chr4.2:4457802-4457821 None:intergenic 30.0%
GAGTGTAATAATGTTCTCAT+TGG - chr4.2:4455740-4455759 None:intergenic 30.0%
GCAATTATATGAACACACAA+TGG + chr4.2:4455835-4455854 MS.gene048924:intron 30.0%
GCATTATTATTATTGGTGAG+AGG - chr4.2:4456682-4456701 None:intergenic 30.0%
GGAAAAATTGTTCAAAGAGA+TGG - chr4.2:4456661-4456680 None:intergenic 30.0%
GTAGCAATGTATTATTTGGA+AGG + chr4.2:4455093-4455112 MS.gene048924:intron 30.0%
GTATGCAAAACATTATGTCA+CGG - chr4.2:4454184-4454203 None:intergenic 30.0%
GTATGTTCTTTCTCAACATT+TGG + chr4.2:4457246-4457265 MS.gene048924:intron 30.0%
GTGAATCACTAAAACATACA+CGG - chr4.2:4453274-4453293 None:intergenic 30.0%
GTTGCAAATTTGTCATGAAA+AGG + chr4.2:4455438-4455457 MS.gene048924:intron 30.0%
TAATGGCAAAAATGAAAGAG+AGG - chr4.2:4453438-4453457 None:intergenic 30.0%
TAATTCAATAGATGAACCTC+AGG - chr4.2:4455061-4455080 None:intergenic 30.0%
TAGAGTTACGAGAGATTATA+TGG + chr4.2:4453933-4453952 MS.gene048924:intron 30.0%
TATTGAATTAATGATCCGTG+TGG + chr4.2:4455071-4455090 MS.gene048924:intron 30.0%
TCAAGCAAATGATATGAAGA+TGG + chr4.2:4458102-4458121 MS.gene048924:CDS 30.0%
TCATGCATGATCTATTAAAC+AGG + chr4.2:4457677-4457696 MS.gene048924:intron 30.0%
TGAACACCATTTATTCTATG+TGG + chr4.2:4456385-4456404 MS.gene048924:intron 30.0%
TGACTAATCACTCTGATAAT+TGG + chr4.2:4458481-4458500 MS.gene048924:intron 30.0%
TGTGGTAGCAATGTATTATT+TGG + chr4.2:4455089-4455108 MS.gene048924:intron 30.0%
TTAATACAGATTTCTCCTCT+TGG - chr4.2:4457515-4457534 None:intergenic 30.0%
TTACTTAAATGGGAAGATGT+AGG - chr4.2:4455880-4455899 None:intergenic 30.0%
TTATTGAAGAGGGAATCATA+TGG + chr4.2:4456209-4456228 MS.gene048924:CDS 30.0%
TTCGTTTGGTATTGTTACAA+AGG - chr4.2:4457396-4457415 None:intergenic 30.0%
TTGTTTCAGATATGGATCTA+TGG + chr4.2:4458013-4458032 MS.gene048924:intron 30.0%
TTTGACAGGATTATTGAAGA+GGG + chr4.2:4456199-4456218 MS.gene048924:CDS 30.0%
! AGTACAGAGCAATTTTGTTA+CGG - chr4.2:4457080-4457099 None:intergenic 30.0%
! CAAAGGGTTTAGAATACATA+CGG - chr4.2:4457840-4457859 None:intergenic 30.0%
! CAATGTTTGGTTCCATTATT+TGG + chr4.2:4454721-4454740 MS.gene048924:intron 30.0%
! CTTTTTACTCTGTTCTTTGA+AGG + chr4.2:4454502-4454521 MS.gene048924:intron 30.0%
! GGTCTCTTTTTCTTAAATGT+TGG - chr4.2:4458395-4458414 None:intergenic 30.0%
! GTAGTTGCTTCTTTCATTTT+AGG - chr4.2:4455256-4455275 None:intergenic 30.0%
! TTACAAAGAAGTGTATGACT+TGG + chr4.2:4453525-4453544 MS.gene048924:CDS 30.0%
! TTGTGTGCTTTGATTTACAT+AGG - chr4.2:4456857-4456876 None:intergenic 30.0%
! TTTCTATTAGTTCTCAAGGA+TGG - chr4.2:4453796-4453815 None:intergenic 30.0%
!! AATGTACGTATTGTTTTGTC+TGG + chr4.2:4457149-4457168 MS.gene048924:CDS 30.0%
!! AATGTTTTTGCAACATGATC+AGG + chr4.2:4457106-4457125 MS.gene048924:intron 30.0%
!! ATGACTTGGTGATCAAAATT+GGG + chr4.2:4453539-4453558 MS.gene048924:CDS 30.0%
!! CATTTTAGGAAAGGGATTAA+TGG - chr4.2:4455242-4455261 None:intergenic 30.0%
!! GATGAATTTTTAGAAGTGGT+GGG + chr4.2:4455388-4455407 MS.gene048924:intron 30.0%
!! GCTTCTTTCATTTTAGGAAA+GGG - chr4.2:4455250-4455269 None:intergenic 30.0%
!! TATGACTTGGTGATCAAAAT+TGG + chr4.2:4453538-4453557 MS.gene048924:CDS 30.0%
!! TGCTTCTTTCATTTTAGGAA+AGG - chr4.2:4455251-4455270 None:intergenic 30.0%
!!! ATGTCGCTTTTCTTTTTTTC+AGG - chr4.2:4455661-4455680 None:intergenic 30.0%
!!! ATTGTTTTTGAGGGTTATAC+AGG + chr4.2:4453333-4453352 MS.gene048924:intron 30.0%
!!! TTGTTTTAGGGAGTAAAATG+CGG + chr4.2:4454377-4454396 MS.gene048924:intron 30.0%
AAAGATTGCGAAGGAAAAGA+AGG + chr4.2:4458183-4458202 MS.gene048924:CDS 35.0%
AAGAGGGCAAAAACATGAAA+CGG + chr4.2:4456962-4456981 MS.gene048924:CDS 35.0%
AAGAGGTTATGATTGATGGA+TGG + chr4.2:4457582-4457601 MS.gene048924:CDS 35.0%
AAGCAAGAAGTTGAGAAGAT+CGG + chr4.2:4455346-4455365 MS.gene048924:CDS 35.0%
AAGGCGAAACATTACATACT+TGG + chr4.2:4458151-4458170 MS.gene048924:CDS 35.0%
AATCTGTATTAAGGGTGGTA+CGG + chr4.2:4457523-4457542 MS.gene048924:CDS 35.0%
AATGCTTCACAAGGTAACAA+TGG + chr4.2:4453020-4453039 MS.gene048924:intron 35.0%
ACAAATTTGCAACAGATAGG+AGG - chr4.2:4455431-4455450 None:intergenic 35.0%
ACACCTTAAGTGCAAATTCA+AGG + chr4.2:4458535-4458554 MS.gene048924:intron 35.0%
ACACGTTACTTACTATGTGT+AGG - chr4.2:4456794-4456813 None:intergenic 35.0%
ACCAAAGAGGTTATGATTGA+TGG + chr4.2:4457578-4457597 MS.gene048924:CDS 35.0%
ACTTCCAAATATGGTAAAGG+AGG - chr4.2:4457443-4457462 None:intergenic 35.0%
ACTTGTGCTCATATCTTACA+AGG + chr4.2:4457218-4457237 MS.gene048924:CDS 35.0%
AGATAAATGCCAAAGAAGGT+GGG - chr4.2:4454917-4454936 None:intergenic 35.0%
AGCATCATAGCTTACCATAT+AGG + chr4.2:4453689-4453708 MS.gene048924:intron 35.0%
AGGTAGATAAATGCCAAAGA+AGG - chr4.2:4454921-4454940 None:intergenic 35.0%
ATATGAACACACAATGGTCA+AGG + chr4.2:4455841-4455860 MS.gene048924:intron 35.0%
ATTGGATATCAATACTCCCT+TGG - chr4.2:4455722-4455741 None:intergenic 35.0%
CAAATGTTAATTTAGGTGCC+GGG + chr4.2:4454972-4454991 MS.gene048924:intron 35.0%
CACACTTCCAAATATGGTAA+AGG - chr4.2:4457446-4457465 None:intergenic 35.0%
CATTCCCATTCACTATTTCA+CGG - chr4.2:4453400-4453419 None:intergenic 35.0%
CCAAATGTTAATTTAGGTGC+CGG + chr4.2:4454971-4454990 MS.gene048924:intron 35.0%
CGGGGTGAAAATATATTTGT+GGG + chr4.2:4455366-4455385 MS.gene048924:CDS 35.0%
CTTGTTGAGAGATCTCTAAT+TGG + chr4.2:4452687-4452706 MS.gene048924:intron 35.0%
CTTTGACAGGATTATTGAAG+AGG + chr4.2:4456198-4456217 MS.gene048924:CDS 35.0%
GAAACAGACGATGTTCAATT+GGG + chr4.2:4456768-4456787 MS.gene048924:CDS 35.0%
GATAATGAAAGTTCCGCTAT+CGG + chr4.2:4456112-4456131 MS.gene048924:intron 35.0%
GATCAGGTAAAACAAGCTTT+AGG + chr4.2:4457122-4457141 MS.gene048924:intron 35.0%
GCAGGATATCAAATTGTTGA+TGG + chr4.2:4456410-4456429 MS.gene048924:intron 35.0%
GCTATTGAAGACATTTCCAA+AGG + chr4.2:4455178-4455197 MS.gene048924:intron 35.0%
GCTCATATCTTACAAGGATA+TGG + chr4.2:4457224-4457243 MS.gene048924:CDS 35.0%
GGACAAACTTGTATTCAGTA+AGG + chr4.2:4456998-4457017 MS.gene048924:CDS 35.0%
GTTCTTATTAGTCACTGAAG+TGG + chr4.2:4456606-4456625 MS.gene048924:intron 35.0%
TACAGCCAAGTAATTCTAGA+AGG - chr4.2:4455466-4455485 None:intergenic 35.0%
TAGATAAATGCCAAAGAAGG+TGG - chr4.2:4454918-4454937 None:intergenic 35.0%
TATCCAACAAATCCAATGCT+GGG + chr4.2:4453371-4453390 MS.gene048924:CDS 35.0%
TATGAACACACAATGGTCAA+GGG + chr4.2:4455842-4455861 MS.gene048924:intron 35.0%
TCCAAACACACTTCCAAATA+TGG - chr4.2:4457452-4457471 None:intergenic 35.0%
TCCATCAATCATAACCTCTT+TGG - chr4.2:4457582-4457601 None:intergenic 35.0%
TCGGGGTGAAAATATATTTG+TGG + chr4.2:4455365-4455384 MS.gene048924:CDS 35.0%
TGAAACAGACGATGTTCAAT+TGG + chr4.2:4456767-4456786 MS.gene048924:CDS 35.0%
TGAAGAAAAGAAGATACCTG+AGG + chr4.2:4455042-4455061 MS.gene048924:CDS 35.0%
TGACACATTGAGAAGTTCAA+TGG - chr4.2:4458609-4458628 None:intergenic 35.0%
TGAGATCTTCATGAATAGCT+TGG + chr4.2:4454272-4454291 MS.gene048924:intron 35.0%
TGTACGATAATGTACACAAG+TGG + chr4.2:4455682-4455701 MS.gene048924:CDS 35.0%
TGTCAAACCTGTATAACAGA+TGG - chr4.2:4456722-4456741 None:intergenic 35.0%
TGTCCTTGAATTTGCACTTA+AGG - chr4.2:4458541-4458560 None:intergenic 35.0%
TGTTTCAGTAAGACCTACAA+AGG - chr4.2:4457363-4457382 None:intergenic 35.0%
TTCGCATAAGTAATTGCAGT+GGG + chr4.2:4452603-4452622 MS.gene048924:intron 35.0%
TTCTCTCTGTGAAGATTCAA+AGG + chr4.2:4458132-4458151 MS.gene048924:CDS 35.0%
TTGAACTAAATAGCGTATCG+TGG + chr4.2:4455998-4456017 MS.gene048924:intron 35.0%
TTGGATATCAATACTCCCTT+GGG - chr4.2:4455721-4455740 None:intergenic 35.0%
! AAATGTTAATTTAGGTGCCG+GGG + chr4.2:4454973-4454992 MS.gene048924:intron 35.0%
! ACCATATTTGGAAGTGTGTT+TGG + chr4.2:4457448-4457467 MS.gene048924:CDS 35.0%
! ATACATGTTGGGATGTTTTC+AGG + chr4.2:4452425-4452444 MS.gene048924:CDS 35.0%
! ATATGTTGCTGTTGAAAACC+TGG + chr4.2:4457781-4457800 MS.gene048924:CDS 35.0%
! ATTTTTGCATAGGCCATGTT+TGG + chr4.2:4453641-4453660 MS.gene048924:intron 35.0%
! TAACTTCCTCTTGTCATTTC+TGG - chr4.2:4455544-4455563 None:intergenic 35.0%
! TCAGGTAAAACAAGCTTTAG+GGG + chr4.2:4457124-4457143 MS.gene048924:intron 35.0%
!! ATACTTGTTGTTGTTGGACA+TGG + chr4.2:4457643-4457662 MS.gene048924:intron 35.0%
!! CAAGAAAGCACTTGAAGATT+GGG + chr4.2:4458078-4458097 MS.gene048924:CDS 35.0%
!! GAAGATAAAAGAGCCTTGTT+TGG - chr4.2:4454097-4454116 None:intergenic 35.0%
!! GGATGAATTTTTAGAAGTGG+TGG + chr4.2:4455387-4455406 MS.gene048924:intron 35.0%
!! GTGGGATGAATTTTTAGAAG+TGG + chr4.2:4455384-4455403 MS.gene048924:CDS 35.0%
!! GTTTGTTATATCTCATGCAG+AGG + chr4.2:4455003-4455022 MS.gene048924:CDS 35.0%
!! TCCATTATTTGGTTCTCTCT+TGG + chr4.2:4454732-4454751 MS.gene048924:intron 35.0%
!!! ACATGATTTTTGGCCTTTGT+AGG + chr4.2:4457347-4457366 MS.gene048924:intron 35.0%
AAAGATGGTAGGCCATCTAT+GGG + chr4.2:4452343-4452362 MS.gene048924:CDS 40.0%
AAAGCTAGAGATGCCAAAGA+TGG + chr4.2:4452328-4452347 MS.gene048924:CDS 40.0%
AAGTTGCATAGCATGGAAAG+AGG + chr4.2:4456945-4456964 MS.gene048924:CDS 40.0%
ACAGATTTCTCCTCTTGGTT+TGG - chr4.2:4457510-4457529 None:intergenic 40.0%
ACATGTATCGAGACCTTCAA+TGG - chr4.2:4452413-4452432 None:intergenic 40.0%
ACATTACGTAGTGAGAATCC+AGG - chr4.2:4454140-4454159 None:intergenic 40.0%
AGAGCTCTTAAAGATTGCGA+AGG + chr4.2:4458174-4458193 MS.gene048924:CDS 40.0%
AGATCACGTTCCATGTCAAA+TGG - chr4.2:4458365-4458384 None:intergenic 40.0%
AGCAAGAAGTTGAGAAGATC+GGG + chr4.2:4455347-4455366 MS.gene048924:CDS 40.0%
AGTGCATCATATCCCATTTC+AGG - chr4.2:4457482-4457501 None:intergenic 40.0%
AGTTGCATAGCATGGAAAGA+GGG + chr4.2:4456946-4456965 MS.gene048924:CDS 40.0%
ATGTACACAAGTGGAACAAC+CGG + chr4.2:4455691-4455710 MS.gene048924:CDS 40.0%
CAAACCTGTATAACAGATGG+AGG - chr4.2:4456719-4456738 None:intergenic 40.0%
CAATCATAACCTCTTTGGTG+AGG - chr4.2:4457577-4457596 None:intergenic 40.0%
CATAATCCATTCCGGACAAT+TGG - chr4.2:4454414-4454433 None:intergenic 40.0%
CATGAATAGCTTGGTCATGA+AGG + chr4.2:4454281-4454300 MS.gene048924:intron 40.0%
CATGTATCGAGACCTTCAAT+GGG - chr4.2:4452412-4452431 None:intergenic 40.0%
CATTGACGAGATGTACAAGA+CGG + chr4.2:4458737-4458756 MS.gene048924:CDS 40.0%
CATTTATTCTATGTGGCTGC+AGG + chr4.2:4456392-4456411 MS.gene048924:intron 40.0%
CCGGCACCTAAATTAACATT+TGG - chr4.2:4454974-4454993 None:intergenic 40.0%
CTGCAGCCACATAGAATAAA+TGG - chr4.2:4456394-4456413 None:intergenic 40.0%
CTTCAAGTGCTTTCTTGCTT+GGG - chr4.2:4458075-4458094 None:intergenic 40.0%
GCCAAGAGAGAACCAAATAA+TGG - chr4.2:4454736-4454755 None:intergenic 40.0%
GGAACGGCACAAAAAATAGT+TGG - chr4.2:4456456-4456475 None:intergenic 40.0%
GGAGAAATCTGTATTAAGGG+TGG + chr4.2:4457518-4457537 MS.gene048924:CDS 40.0%
GGAGTAAAATGCGGCATTTA+TGG + chr4.2:4454386-4454405 MS.gene048924:CDS 40.0%
GTATCCAACAAATCCAATGC+TGG + chr4.2:4453370-4453389 MS.gene048924:CDS 40.0%
GTCACATGTGCTTATTCTTG+AGG + chr4.2:4453596-4453615 MS.gene048924:intron 40.0%
GTTCGCATAAGTAATTGCAG+TGG + chr4.2:4452602-4452621 MS.gene048924:intron 40.0%
TCAACCTCCATCTGTTATAC+AGG + chr4.2:4456712-4456731 MS.gene048924:intron 40.0%
TCACAAACATCACATGGTGT+AGG - chr4.2:4456542-4456561 None:intergenic 40.0%
TCAGCATAAAGCTTCAAGTG+AGG - chr4.2:4458273-4458292 None:intergenic 40.0%
TCCATGCTCATAATCCATTC+CGG - chr4.2:4454422-4454441 None:intergenic 40.0%
TCTTCAAGTGCTTTCTTGCT+TGG - chr4.2:4458076-4458095 None:intergenic 40.0%
TGAAGGTCTCGATACATGTT+GGG + chr4.2:4452414-4452433 MS.gene048924:CDS 40.0%
TGATCCAGTTCCATTTGACA+TGG + chr4.2:4458352-4458371 MS.gene048924:CDS 40.0%
TGGTAGTACTTAAGCAACTG+CGG - chr4.2:4458416-4458435 None:intergenic 40.0%
TGGTTCCATACAGGTTCTTT+CGG + chr4.2:4457602-4457621 MS.gene048924:intron 40.0%
TGTACACTCTATCAAGCACA+CGG - chr4.2:4456479-4456498 None:intergenic 40.0%
TGTGAAAGCAATGCTTCACA+AGG + chr4.2:4453011-4453030 MS.gene048924:intron 40.0%
TGTGTAGCAATTGTGAGCTT+TGG + chr4.2:4455304-4455323 MS.gene048924:intron 40.0%
TTCAACCGAAAGAACCTGTA+TGG - chr4.2:4457610-4457629 None:intergenic 40.0%
TTGAAGGTCTCGATACATGT+TGG + chr4.2:4452413-4452432 MS.gene048924:CDS 40.0%
TTGGAGTCTGTACCTGAAAT+GGG + chr4.2:4457467-4457486 MS.gene048924:CDS 40.0%
! ATAAAGTCCATGAGCATTGC+AGG - chr4.2:4454862-4454881 None:intergenic 40.0%
! ATCATCGCTATTGGTGACAA+AGG - chr4.2:4454762-4454781 None:intergenic 40.0%
! ATTGATGGATGGTTCCATAC+AGG + chr4.2:4457593-4457612 MS.gene048924:CDS 40.0%
! CATTTATGGTGCCAATTGTC+CGG + chr4.2:4454400-4454419 MS.gene048924:CDS 40.0%
! GTATCGTAGCTGTTTCACTA+AGG + chr4.2:4452372-4452391 MS.gene048924:CDS 40.0%
! TGATTTGTCACTGCAATTCC+TGG + chr4.2:4454119-4454138 MS.gene048924:intron 40.0%
! TGGGAAGATGTAGGCATTTT+AGG - chr4.2:4455871-4455890 None:intergenic 40.0%
! TTTGGAGTCTGTACCTGAAA+TGG + chr4.2:4457466-4457485 MS.gene048924:CDS 40.0%
!! AGGCTCCTTCTAGAATTACT+TGG + chr4.2:4455458-4455477 MS.gene048924:intron 40.0%
!! CAGGTAAAACAAGCTTTAGG+GGG + chr4.2:4457125-4457144 MS.gene048924:intron 40.0%
!! GCAAGAAAGCACTTGAAGAT+TGG + chr4.2:4458077-4458096 MS.gene048924:CDS 40.0%
AAACAGGAGATATCGGAGAG+TGG + chr4.2:4457693-4457712 MS.gene048924:intron 45.0%
AACAAGAGGGACACATGAAG+TGG + chr4.2:4453097-4453116 MS.gene048924:intron 45.0%
ACAAGAGGGACACATGAAGT+GGG + chr4.2:4453098-4453117 MS.gene048924:intron 45.0%
AGCTTGGTCATGAAGGACTA+TGG + chr4.2:4454288-4454307 MS.gene048924:intron 45.0%
AGGTATGATCCCACCTTCTT+TGG + chr4.2:4454905-4454924 MS.gene048924:intron 45.0%
CAAAGATGGTAGGCCATCTA+TGG + chr4.2:4452342-4452361 MS.gene048924:CDS 45.0%
CAAAGATGTGTGCAAGTGGA+AGG - chr4.2:4456183-4456202 None:intergenic 45.0%
CACTTGCACACATCTTTGAC+AGG + chr4.2:4456185-4456204 MS.gene048924:CDS 45.0%
CATAGATGGCCTACCATCTT+TGG - chr4.2:4452344-4452363 None:intergenic 45.0%
CATTCGTGCTTGTGGTTATG+GGG + chr4.2:4453567-4453586 MS.gene048924:CDS 45.0%
CCATTCGTGCTTGTGGTTAT+GGG + chr4.2:4453566-4453585 MS.gene048924:CDS 45.0%
CCTCTATCGAAACATGTCGA+AGG + chr4.2:4457179-4457198 MS.gene048924:CDS 45.0%
CCTTCGACATGTTTCGATAG+AGG - chr4.2:4457182-4457201 None:intergenic 45.0%
CGTTCCATGTCAAATGGAAC+TGG - chr4.2:4458359-4458378 None:intergenic 45.0%
CTAGAGATGCCAAAGATGGT+AGG + chr4.2:4452332-4452351 MS.gene048924:CDS 45.0%
CTCAGTCCAGAAATGACAAG+AGG + chr4.2:4455535-4455554 MS.gene048924:intron 45.0%
CTGTCAAAGATGTGTGCAAG+TGG - chr4.2:4456187-4456206 None:intergenic 45.0%
GAAGAGGGAATCATATGGAG+TGG + chr4.2:4456214-4456233 MS.gene048924:CDS 45.0%
GCAAGAAGTTGAGAAGATCG+GGG + chr4.2:4455348-4455367 MS.gene048924:CDS 45.0%
GCAGTTGCTTAAGTACTACC+AGG + chr4.2:4458415-4458434 MS.gene048924:CDS 45.0%
GCTTGGTCATGAAGGACTAT+GGG + chr4.2:4454289-4454308 MS.gene048924:intron 45.0%
GGGACCTCCTTTACCATATT+TGG + chr4.2:4457436-4457455 MS.gene048924:CDS 45.0%
GGTCTTACTGAAACATGTGC+TGG + chr4.2:4457368-4457387 MS.gene048924:intron 45.0%
GTACACTCTATCAAGCACAC+GGG - chr4.2:4456478-4456497 None:intergenic 45.0%
GTCGCCGTGAAATAGTGAAT+GGG + chr4.2:4453393-4453412 MS.gene048924:CDS 45.0%
GTGAAACAGCTACGATACAC+AGG - chr4.2:4452370-4452389 None:intergenic 45.0%
GTGCTTGATAGAGTGTACAC+AGG + chr4.2:4456480-4456499 MS.gene048924:CDS 45.0%
GTTTGTTCGAATCAAGACGG+TGG - chr4.2:4457052-4457071 None:intergenic 45.0%
TACACTCTATCAAGCACACG+GGG - chr4.2:4456477-4456496 None:intergenic 45.0%
TATAACAAACTCCACAGCCC+CGG - chr4.2:4454993-4455012 None:intergenic 45.0%
TCCATTCGTGCTTGTGGTTA+TGG + chr4.2:4453565-4453584 MS.gene048924:CDS 45.0%
TGAAACGGCAGCTCCATTAA+TGG + chr4.2:4456977-4456996 MS.gene048924:CDS 45.0%
TGTAGCCTGGCAAATTCAAG+TGG + chr4.2:4453497-4453516 MS.gene048924:intron 45.0%
TTGAGATACTCTGCTGCCTT+TGG - chr4.2:4455197-4455216 None:intergenic 45.0%
TTGCAGCAAGTTGCATAGCA+TGG + chr4.2:4456938-4456957 MS.gene048924:intron 45.0%
TTGGGTTAACAACAGCGACA+AGG - chr4.2:4458057-4458076 None:intergenic 45.0%
TTGTCAAACAGCGGATGTAG+CGG - chr4.2:4455974-4455993 None:intergenic 45.0%
! GTATCGATATCGTGTCGTGT+CGG - chr4.2:4453197-4453216 None:intergenic 45.0%
! GTTTGCCACTTGAATTTGCC+AGG - chr4.2:4453505-4453524 None:intergenic 45.0%
! TCGCTATTGGTGACAAAGGA+TGG - chr4.2:4454758-4454777 None:intergenic 45.0%
! TCTGGGATGAAGCAGATACT+AGG + chr4.2:4455763-4455782 MS.gene048924:CDS 45.0%
!! ATATGGAGTGGTGCTGCAAT+AGG + chr4.2:4456226-4456245 MS.gene048924:CDS 45.0%
!! CACATGAAGTGGGTTATGGT+TGG + chr4.2:4453108-4453127 MS.gene048924:intron 45.0%
!! GGAATGGATTATGAGCATGG+AGG + chr4.2:4454421-4454440 MS.gene048924:CDS 45.0%
!! TCCGGAATGGATTATGAGCA+TGG + chr4.2:4454418-4454437 MS.gene048924:CDS 45.0%
!! ATAAATAATTAAACAAATAA+AGG - chr4.2:4455278-4455297 None:intergenic 5.0%
!! TAGATAAATAAATAAATAAA+AGG - chr4.2:4458650-4458669 None:intergenic 5.0%
ACGTGAAGACCTCACCAAAG+AGG + chr4.2:4457565-4457584 MS.gene048924:CDS 50.0%
AGCAGCACACGATGATGTTG+CGG - chr4.2:4456047-4456066 None:intergenic 50.0%
ATCGGAGAGTGGCAACCTAA+TGG + chr4.2:4457704-4457723 MS.gene048924:CDS 50.0%
ATCTCTCCTCCTCCCATTGA+AGG + chr4.2:4452397-4452416 MS.gene048924:CDS 50.0%
CAAGCAGAGACAACCGATAG+CGG - chr4.2:4456128-4456147 None:intergenic 50.0%
CAATACTCCCTTGGGATCAC+CGG - chr4.2:4455713-4455732 None:intergenic 50.0%
CCCATAACCACAAGCACGAA+TGG - chr4.2:4453569-4453588 None:intergenic 50.0%
CGATACACAGGACCCATAGA+TGG - chr4.2:4452358-4452377 None:intergenic 50.0%
CTAGCTTAGTCTGGCCGTTT+AGG - chr4.2:4453964-4453983 None:intergenic 50.0%
GCACTTGCAACCAAACCAAG+AGG + chr4.2:4457497-4457516 MS.gene048924:CDS 50.0%
GCAGTGGGTAATGTGAGTGA+AGG + chr4.2:4452618-4452637 MS.gene048924:intron 50.0%
GGTCGCCGTGAAATAGTGAA+TGG + chr4.2:4453392-4453411 MS.gene048924:CDS 50.0%
GTATCGAGACCTTCAATGGG+AGG - chr4.2:4452409-4452428 None:intergenic 50.0%
TCTATCAAGCACACGGGGAA+CGG - chr4.2:4456472-4456491 None:intergenic 50.0%
TGTGTCACACTCTTGTAGCC+TGG + chr4.2:4453484-4453503 MS.gene048924:intron 50.0%
TTTCAGGCCTGCAATGCTCA+TGG + chr4.2:4454852-4454871 MS.gene048924:intron 50.0%
! ATGGTGCCAATTGTCCGGAA+TGG + chr4.2:4454405-4454424 MS.gene048924:CDS 50.0%
! CGACCCAGCATTGGATTTGT+TGG - chr4.2:4453377-4453396 None:intergenic 50.0%
!! CTGCAATAGGTTTCTGGCGA+GGG + chr4.2:4456239-4456258 MS.gene048924:CDS 50.0%
!! GGGACACATGAAGTGGGTTA+TGG + chr4.2:4453104-4453123 MS.gene048924:intron 50.0%
!! GTGGTGCTGCAATAGGTTTC+TGG + chr4.2:4456233-4456252 MS.gene048924:CDS 50.0%
!! TGCAATAGGTTTCTGGCGAG+GGG + chr4.2:4456240-4456259 MS.gene048924:CDS 50.0%
ATTTCACGGCGACCCAGCAT+TGG - chr4.2:4453386-4453405 None:intergenic 55.0%
GAGCACAAGTCACAACACGC+AGG - chr4.2:4457208-4457227 None:intergenic 55.0%
GGAACAACCGGTGATCCCAA+GGG + chr4.2:4455703-4455722 MS.gene048924:CDS 55.0%
GGGAAGTCCATTCGTGCTTG+TGG + chr4.2:4453559-4453578 MS.gene048924:CDS 55.0%
TCGAGACCTTCAATGGGAGG+AGG - chr4.2:4452406-4452425 None:intergenic 55.0%
TGGAACAACCGGTGATCCCA+AGG + chr4.2:4455702-4455721 MS.gene048924:CDS 55.0%
! AAGGGTGGTACGGTTTTCGC+AGG + chr4.2:4457533-4457552 MS.gene048924:CDS 55.0%
! AGGGTGGTACGGTTTTCGCA+GGG + chr4.2:4457534-4457553 MS.gene048924:CDS 55.0%
! GATATCGTGTCGTGTCGGCA+AGG - chr4.2:4453192-4453211 None:intergenic 55.0%
!! GCTGCAATAGGTTTCTGGCG+AGG + chr4.2:4456238-4456257 MS.gene048924:CDS 55.0%
!! TAATTTAGGTGCCGGGGCTG+TGG + chr4.2:4454979-4454998 MS.gene048924:intron 55.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 4452292 4458767 4452292 ID=MS.gene048924
chr4.2 mRNA 4452292 4458767 4452292 ID=MS.gene048924.t1;Parent=MS.gene048924
chr4.2 exon 4452292 4452446 4452292 ID=MS.gene048924.t1.exon1;Parent=MS.gene048924.t1
chr4.2 CDS 4452292 4452446 4452292 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4453355 4453418 4453355 ID=MS.gene048924.t1.exon2;Parent=MS.gene048924.t1
chr4.2 CDS 4453355 4453418 4453355 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4453502 4453591 4453502 ID=MS.gene048924.t1.exon3;Parent=MS.gene048924.t1
chr4.2 CDS 4453502 4453591 4453502 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4454386 4454442 4454386 ID=MS.gene048924.t1.exon4;Parent=MS.gene048924.t1
chr4.2 CDS 4454386 4454442 4454386 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4454858 4454906 4454858 ID=MS.gene048924.t1.exon5;Parent=MS.gene048924.t1
chr4.2 CDS 4454858 4454906 4454858 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4454987 4455063 4454987 ID=MS.gene048924.t1.exon6;Parent=MS.gene048924.t1
chr4.2 CDS 4454987 4455063 4454987 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4455179 4455218 4455179 ID=MS.gene048924.t1.exon7;Parent=MS.gene048924.t1
chr4.2 CDS 4455179 4455218 4455179 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4455311 4455405 4455311 ID=MS.gene048924.t1.exon8;Parent=MS.gene048924.t1
chr4.2 CDS 4455311 4455405 4455311 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4455634 4455801 4455634 ID=MS.gene048924.t1.exon9;Parent=MS.gene048924.t1
chr4.2 CDS 4455634 4455801 4455634 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4456151 4456261 4456151 ID=MS.gene048924.t1.exon10;Parent=MS.gene048924.t1
chr4.2 CDS 4456151 4456261 4456151 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4456414 4456501 4456414 ID=MS.gene048924.t1.exon11;Parent=MS.gene048924.t1
chr4.2 CDS 4456414 4456501 4456414 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4456734 4456800 4456734 ID=MS.gene048924.t1.exon12;Parent=MS.gene048924.t1
chr4.2 CDS 4456734 4456800 4456734 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4456944 4457019 4456944 ID=MS.gene048924.t1.exon13;Parent=MS.gene048924.t1
chr4.2 CDS 4456944 4457019 4456944 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4457128 4457245 4457128 ID=MS.gene048924.t1.exon14;Parent=MS.gene048924.t1
chr4.2 CDS 4457128 4457245 4457128 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4457369 4457614 4457369 ID=MS.gene048924.t1.exon15;Parent=MS.gene048924.t1
chr4.2 CDS 4457369 4457614 4457369 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4457699 4457838 4457699 ID=MS.gene048924.t1.exon16;Parent=MS.gene048924.t1
chr4.2 CDS 4457699 4457838 4457699 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4458022 4458204 4458022 ID=MS.gene048924.t1.exon17;Parent=MS.gene048924.t1
chr4.2 CDS 4458022 4458204 4458022 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4458317 4458436 4458317 ID=MS.gene048924.t1.exon18;Parent=MS.gene048924.t1
chr4.2 CDS 4458317 4458436 4458317 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
chr4.2 exon 4458732 4458767 4458732 ID=MS.gene048924.t1.exon19;Parent=MS.gene048924.t1
chr4.2 CDS 4458732 4458767 4458732 ID=cds.MS.gene048924.t1;Parent=MS.gene048924.t1
Gene Sequence

>MS.gene048924

ATGGCTGAAGATAAATCATTCATCGTTGAGGTTGAGAAAGCTAGAGATGCCAAAGATGGTAGGCCATCTATGGGTCCTGTGTATCGTAGCTGTTTCACTAAGGATATCTCTCCTCCTCCCATTGAAGGTCTCGATACATGTTGGGATGTTTTCAGGTCACTTTCATTTCATTCTCATATATATTTTCATAGATCACAATATTATTTTCATTTCTACTTGTCACAACATCTAAAATGTCTATGTCTATCATTTCTTCACGTGTTAATTTGGCACGATTTGATTGAATGAATTTGCATGGTTTTAAATTGTGGTTCGCATAAGTAATTGCAGTGGGTAATGTGAGTGAAGGTTTTTGTTTTGTGTAAGCATTGTCAAAGTAGAACAATGAGATTGAACTTGTTGAGAGATCTCTAATTGGATCTCCTTTGAAAAATAAATCTCTTGAAAACAAGTCATACTTTCTAGCTCTATAAATTCGAATTAAGATTACTTTGATAGGAAGATATATTGTAGATTTCATCTAAAAGTTATAGAAAACATGTAACTAGACGCAATTAAAAATACATATAAAATCCATGTAAAACATAAATTTAAAATGAGAACTAATATTTTAAAAGTTGAGTGAGTGTAAAGATAATATATAATATTGTCATTTATGTATTAGAATAGGAATAAATAATCTAAACAATGGTAAAATACAACTAAAAGTGTGTCTAATGTGTGAAAGCAATGCTTCACAAGGTAACAATGGTTAGAGTTGATATACTTTTTGGAAAAAAAACAGAATGAGAAAAAATGTACATACAACAAGAGGGACACATGAAGTGGGTTATGGTTGGCTTTTTTACTATATTTCATCTATGTAACACCGATATTTCGATCTAATCGAAAGTGTGTCCTTGCCGACACGACACGATATCGATACATGCAGATACATTCAATTTTTTTCTCTTCAAATTATTACAAGTAAATGTCGTGTCCGTGTATGTTTTAGTGATTCACAGTATTTCGTAAGAGATTTAACAAATTAATTTAGTTCTGATTGTTTTTGAGGGTTATACAGGACTGCTGTTGAGAAGTATCCAACAAATCCAATGCTGGGTCGCCGTGAAATAGTGAATGGGAATGTGAACACTCTTTTTCCCTCTCTTTCATTTTTGCCATTATGCAAATTTATTGTTACTTTTTGAATTGTGTCACACTCTTGTAGCCTGGCAAATTCAAGTGGCAAACTTACAAAGAAGTGTATGACTTGGTGATCAAAATTGGGAAGTCCATTCGTGCTTGTGGTTATGGGGAAGTAAGTCACATGTGCTTATTCTTGAGGATTGCTTTCACCTTTTCTGATTATTTTTGCATAGGCCATGTTTGGATAAACAGTTTAATAAAGTGTTTATAGCATCATAGCTTACCATATAGGTGCTTATGTATTAGCAATTTCGAAAACAAAAAATACTATAAAGTCAAACTGCTATCATGAGTTATAAGCTGTTTTCATGTGCCATCCTTGAGAACTAATAGAAATAATCGGGAATCAGCTTATAGACATGTCATTGTTATCAATGTAGGTTCAGAGAGAATAACAAAACAAAGGCGGCTGCTAGAGTTTCATAAAATATCATATGGCATAGCATATAAAAATAGAGTTACGAGAGATTATATGGCAAAACCTAAACGGCCAGACTAAGCTAGAAATATAAAGACCCGATAACTTAAGTCAAATATTTTATTATCTAACAATCATAAGTTGTTATAAACTCTCACAAGTGTTTATGTCACTAGATCAGTTGAAATAAATCAATCCAAACAAGGCTCTTTTATCTTCTTTGATTTGTCACTGCAATTCCTGGATTCTCACTACGTAATGTGTTGCTCACTTCTTCTGTTATCCGTGACATAATGTTTTGCATACCAAAAACTAATTCAAAATTCTCTTTATTTCTTTCTCTTTTACAATTATATATTCTTGCTCTTACACTTTGAGATCTTCATGAATAGCTTGGTCATGAAGGACTATGGGATCTTTTGCCTCATATTAGTATCTTTTCTTGTATTGTGTGTATGCAAGCTAAATATATATATTGCTTGTTTTAGGGAGTAAAATGCGGCATTTATGGTGCCAATTGTCCGGAATGGATTATGAGCATGGAGGTACATTTTATTTTGAACTTATTTATTTATTCATGTTATCTTCTATGCATATGATTTTTCTTTTTACTCTGTTCTTTGAAGGTTTCAGTTGTAGTTATACGTTGATATTTGCTTGTACCTTTGTGTTGTATATTTATCAGTTTTTTAATATATTGTTAATGCAATAATGTGATTTTTCTAGTCTCTTTATGAATTATGATCCATTTTGAACATGAAAGAAAAACAAGGCTTTTTTTAAATTGAAACTTTGTTTCATCTATTGAATATTTGTTCTTATACAATGTTTGGTTCCATTATTTGGTTCTCTCTTGGCCATCCTTTGTCACCAATAGCGATGATCAATTTTAGTGTTGCTAAGCTAGTTTCTGTTATCCTTTTAACTTAACATGTCTTACATATTTTAAGATAATTTCAGGCCTGCAATGCTCATGGACTTTATTGTGTTCCTTTATATGATACTTTAGGTATGATCCCACCTTCTTTGGCATTTATCTACCTATATTGTGTTACCACTTTAATATTTATTTTCCAAATGTTAATTTAGGTGCCGGGGCTGTGGAGTTTGTTATATCTCATGCAGAGGTCTCAATAGCATTTGTTGAAGAAAAGAAGATACCTGAGGTTCATCTATTGAATTAATGATCCGTGTGGTAGCAATGTATTATTTGGAAGGATTAGAAAGTGTGATCTGCAATTTTCTATAACTAAGTCATATATTTTTTCTGAAACTTTTCAGCTATTGAAGACATTTCCAAAGGCAGCAGAGTATCTCAAGAGTAAGTTTCATTGATTTTCTCCATTAATCCCTTTCCTAAAATGAAAGAAGCAACTACCTTTATTTGTTTAATTATTTATCTATTTTGTGTAGCAATTGTGAGCTTTGGAAAAGTTTCTGCAGAACAAAAGCAAGAAGTTGAGAAGATCGGGGTGAAAATATATTTGTGGGATGAATTTTTAGAAGTGGTGGGTTATTATTACTCTTTTTCCTCCTATCTGTTGCAAATTTGTCATGAAAAGGCTCCTTCTAGAATTACTTGGCTGTATCACAAAATATTAGATACACTTCTTGAATTGCAAGTTTTGTTTCTAACACTCAGTCCAGAAATGACAAGAGGAAGTTACGTGTTACAATTGTTTTATCGATATTTTGTGGTTGGATTGCTGATTCGAGTTTTTTAATGTATGTCACAGGGTCATGATAAGAATTTTGATCTTCCTGAAAAAAAGAAAAGCGACATATGTACGATAATGTACACAAGTGGAACAACCGGTGATCCCAAGGGAGTATTGATATCCAATGAGAACATTATTACACTCTTATCTGGGATGAAGCAGATACTAGGTAGTTGCAATGAACAAGTAAGTAGTTTTCTATTAACACATATTTTTCTTGCAATTATATGAACACACAATGGTCAAGGGACTCCTAAAATGCCTACATCTTCCCATTTAAGTAAAAGCATTTTGGTCTTCTAATATGAATCTTAAGCAGTTTGATCAAATACTGCTGCACAACAATGATATAGCGCCGCTACATCCGCTGTTTGACAATATTTTGAACTAAATAGCGTATCGTGGAACAATAACAATTTATTCAAATTCCGCAACATCATCGTGTGCTGCTATTCAACAAAGCTAAATTGCTCCTAAAATGCTATTTCATTTTTTGGATAATGAAAGTTCCGCTATCGGTTGTCTCTGCTTGCAGTTGCATCAGAAAGATGTATACATATCATACCTTCCACTTGCACACATCTTTGACAGGATTATTGAAGAGGGAATCATATGGAGTGGTGCTGCAATAGGTTTCTGGCGAGGGGTGAGTATAGATATATACGTGATAAATCTTTCATTACTGAATGAAGGCTTGATGTGATTATAGTATATTGGATTTTCTTAAATTTAATATCAAGTAAGTCAAAATTTGTATTTGATATTAATATGAACACCATTTATTCTATGTGGCTGCAGGATATCAAATTGTTGATGGAAGACATTGCTGAGTTAAAACCAACTATTTTTTGTGCCGTTCCCCGTGTGCTTGATAGAGTGTACACAGGTAATTTTTTGTCGTTGCTTACAGTTTAGTCATCTTTCCTACACCATGTGATGTTTGTGAAAAAATTATAATTTCATAAAGAACAAAACTATACTTTTAAGATAGTTCTTATTAGTCACTGAAGTGGTCTTTTTATTGAATTCCTTATTCTAATTTCCATCTCTTTGAACAATTTTTCCTCTCACCAATAATAATAATGCAATGAAAATCTCAACCTCCATCTGTTATACAGGTTTGACAGAAAAGATTAATAATGGGGGCTTTGTGAAACAGACGATGTTCAATTGGGCCTACACATAGTAAGTAACGTGTTTTAAATGATGGAAATATGACTAATTATTGTATGAGTGTTCCTATGTAAATCAAAGCACACAAAATCTCATTTAGAAGATGATAATGCATTTCAATGTTCTGATAATATAAACTATGAAATATGTTGCAGCAAGTTGCATAGCATGGAAAGAGGGCAAAAACATGAAACGGCAGCTCCATTAATGGACAAACTTGTATTCAGTAAGGTGATTGTAGTTTCACATATTTTAATTCACCACCGTCTTGATTCGAACAAACAATAACCGTAACAAAATTGCTCTGTACTAATAATAATGTTTTTGCAACATGATCAGGTAAAACAAGCTTTAGGGGGTAATGTACGTATTGTTTTGTCTGGAGCTGCGCCTCTATCGAAACATGTCGAAGGTTTCCTGCGTGTTGTGACTTGTGCTCATATCTTACAAGGATATGGTATGTTCTTTCTCAACATTTGGACTATCATGAACTTCTGTTACATTTATGTCTGTGATTATTGATGTATTAAATCAGCAAAAGATTCTTTTTAAACATGGACATGATTTTTGGCCTTTGTAGGTCTTACTGAAACATGTGCTGGATCCTTTGTAACAATACCAAACGAAATAAATATGCTTGGTATGGTGGGACCTCCTTTACCATATTTGGAAGTGTGTTTGGAGTCTGTACCTGAAATGGGATATGATGCACTTGCAACCAAACCAAGAGGAGAAATCTGTATTAAGGGTGGTACGGTTTTCGCAGGGTATCACAAACGTGAAGACCTCACCAAAGAGGTTATGATTGATGGATGGTTCCATACAGGTTCTTTCGGTTGAACTTTAGATAATCTATACTTGTTGTTGTTGGACATGGTCACATTTTATTCATGCATGATCTATTAAACAGGAGATATCGGAGAGTGGCAACCTAATGGAAGCATGAAAATTATCGATCGAAAGAAGAATATATTTAAGCTTTCACAAGGAGAATATGTTGCTGTTGAAAACCTGGAGAATATTTATGTTCAAGTTAATGTTATTGAATCCGTATGTATTCTAAACCCTTTGAATAGTTTAGAAGTACTATTTTGCAATGAATTTGTTTTCCTTTAAAGGAGTTAAGAAAATATGTGGAGTAATGATATTAAAAGGTTTAGTTTCAGCTTCTTTTCATTAGTAGACAATGTTTTGTGACATGTTTATATTGTGTTTTATCTTTCTTTGTTTCAGATATGGATCTATGGAAACAGTTTTGAGCACTTCCTTGTCGCTGTTGTTAACCCAAGCAAGAAAGCACTTGAAGATTGGGCTCAAGCAAATGATATGAAGATGGACTTTAATTCTCTCTGTGAAGATTCAAAGGCGAAACATTACATACTTGGAGAGCTCTTAAAGATTGCGAAGGAAAAGAAGGTTCTATTTAGCTAATGTCTCATAATATTTCTCTAATTTGTTATAATTTGATGAATTTGAGAACACCTCACTTGAAGCTTTATGCTGATCATGATTTTTGTTCTTTTTGTAGTTGAAAGGTTTTGAGTTTGTTAAAGTTGTTCATCTTGATCCAGTTCCATTTGACATGGAACGTGATCTTCTCACACCAACATTTAAGAAAAAGAGACCGCAGTTGCTTAAGTACTACCAGGTATAACTTGTTAAAATTTTGGATTATGTTATGTTTCACTAAGTTGACTAATCACTCTGATAATTGGACATTTGAACTATAACTGAATGTCAGAATTGACACCTTAAGTGCAAATTCAAGGACATAAGTACAGTTTATAAAGTTTGCCCCATAAAATATCTTTCTAATTCCATTGAACTTCTCAATGTGTCAAACCAATTTTCTTTTGCTCCTTTTATTTATTTATTTATCTATTTATTGTACAAACTTAAGCACATACTTGTTTCAGTACTGATTGTAATATTTTTGTGCACAGAATATCATTGACGAGATGTACAAGACGGCCAAATAA
Protein sequence

>MS.gene048924.t1

MAEDKSFIVEVEKARDAKDGRPSMGPVYRSCFTKDISPPPIEGLDTCWDVFRTAVEKYPTNPMLGRREIVNGNPGKFKWQTYKEVYDLVIKIGKSIRACGYGEGVKCGIYGANCPEWIMSMEACNAHGLYCVPLYDTLGAGAVEFVISHAEVSIAFVEEKKIPELLKTFPKAAEYLKTIVSFGKVSAEQKQEVEKIGVKIYLWDEFLEVGHDKNFDLPEKKKSDICTIMYTSGTTGDPKGVLISNENIITLLSGMKQILGSCNEQLHQKDVYISYLPLAHIFDRIIEEGIIWSGAAIGFWRGDIKLLMEDIAELKPTIFCAVPRVLDRVYTGLTEKINNGGFVKQTMFNWAYTYKLHSMERGQKHETAAPLMDKLVFSKVKQALGGNVRIVLSGAAPLSKHVEGFLRVVTCAHILQGYGLTETCAGSFVTIPNEINMLGMVGPPLPYLEVCLESVPEMGYDALATKPRGEICIKGGTVFAGYHKREDLTKEVMIDGWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYVQVNVIESIWIYGNSFEHFLVAVVNPSKKALEDWAQANDMKMDFNSLCEDSKAKHYILGELLKIAKEKKLKGFEFVKVVHLDPVPFDMERDLLTPTFKKKRPQLLKYYQNIIDEMYKTAK