AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25695

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25695.t1 MTR_3g082660 98.349 727 12 0 1 727 1 727 0.0 1467
MS.gene25695.t1 MTR_1g030290 62.734 695 253 5 35 727 5 695 0.0 900
MS.gene25695.t1 MTR_3g087980 60.576 695 270 2 33 727 3 693 0.0 896
MS.gene25695.t1 MTR_1g104810 34.660 603 361 11 131 727 43 618 8.41e-112 352
MS.gene25695.t1 MTR_1g104810 33.643 645 381 13 89 727 82 685 5.85e-111 352
MS.gene25695.t1 MTR_5g009350 32.975 652 393 13 83 726 39 654 3.15e-101 325
MS.gene25695.t1 MTR_5g009350 33.438 640 382 13 83 714 39 642 3.10e-100 322
MS.gene25695.t1 MTR_5g009360 32.362 652 397 12 83 726 39 654 2.31e-99 320
MS.gene25695.t1 MTR_4g068670 32.673 606 370 14 132 726 73 651 7.95e-97 313
MS.gene25695.t1 MTR_8g099420 30.285 667 421 12 68 726 25 655 2.42e-96 312
MS.gene25695.t1 MTR_1g034360 32.224 661 392 17 79 726 36 653 2.48e-94 307
MS.gene25695.t1 MTR_7g109830 31.269 646 400 14 89 726 43 652 6.50e-91 298
MS.gene25695.t1 MTR_5g009360 35.924 476 278 8 258 726 73 528 4.77e-84 276
MS.gene25695.t1 MTR_1g086600 30.218 642 406 12 93 726 69 676 1.76e-82 276
MS.gene25695.t1 MTR_5g009350 32.394 568 341 12 83 642 39 571 1.66e-81 270
MS.gene25695.t1 MTR_5g009350 32.486 551 329 12 83 625 39 554 2.13e-81 270
MS.gene25695.t1 MTR_3g084450 24.961 645 395 20 138 726 108 719 4.34e-40 157
MS.gene25695.t1 MTR_3g084470 24.923 646 391 25 138 726 106 714 7.79e-36 145
MS.gene25695.t1 MTR_8g083170 23.988 642 407 17 138 726 110 723 1.33e-35 144
MS.gene25695.t1 MTR_3g084450 26.033 484 291 15 283 726 55 511 6.09e-34 137
MS.gene25695.t1 MTR_4g077900 27.457 346 182 13 286 623 125 409 4.40e-19 91.3
MS.gene25695.t1 MTR_2g105570 25.866 491 268 19 138 611 55 466 3.22e-18 89.4
MS.gene25695.t1 MTR_5g027500 26.705 352 179 14 272 611 202 486 1.16e-17 87.4
MS.gene25695.t1 MTR_5g007640 24.082 490 274 20 138 611 98 505 2.26e-16 83.6
MS.gene25695.t1 MTR_4g005750 26.747 501 269 21 135 620 51 468 5.81e-16 82.0
MS.gene25695.t1 MTR_4g128337 24.897 486 276 19 135 609 57 464 1.04e-13 74.7
MS.gene25695.t1 MTR_1g063110 28.022 182 109 8 441 611 296 466 7.23e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25695.t1 AT2G04350 72.419 678 187 0 50 727 43 720 0.0 1042
MS.gene25695.t1 AT2G04350 72.419 678 187 0 50 727 43 720 0.0 1042
MS.gene25695.t1 AT1G77590 64.255 691 241 1 37 727 7 691 0.0 953
MS.gene25695.t1 AT1G77590 67.273 550 174 1 178 727 2 545 0.0 799
MS.gene25695.t1 AT5G27600 34.891 642 377 9 89 727 85 688 6.86e-124 385
MS.gene25695.t1 AT3G05970 34.477 641 379 10 89 726 85 687 1.43e-115 364
MS.gene25695.t1 AT4G23850 32.312 653 396 14 83 726 40 655 1.10e-103 332
MS.gene25695.t1 AT4G11030 32.061 655 395 15 83 726 40 655 8.49e-101 324
MS.gene25695.t1 AT1G64400 31.988 644 390 14 93 726 50 655 2.61e-98 318
MS.gene25695.t1 AT1G49430 31.003 658 401 14 80 727 44 658 1.15e-97 316
MS.gene25695.t1 AT2G47240 31.442 652 391 16 89 726 43 652 4.57e-93 304
MS.gene25695.t1 AT2G47240 31.442 652 391 16 89 726 43 652 4.57e-93 304
MS.gene25695.t1 AT2G47240 31.442 652 391 16 89 726 43 652 4.57e-93 304
MS.gene25695.t1 AT2G47240 31.605 617 380 14 124 726 5 593 3.89e-91 297
MS.gene25695.t1 AT1G49430 30.080 502 298 14 80 571 44 502 2.00e-62 218
MS.gene25695.t1 AT4G14070 24.181 641 394 19 138 727 128 727 9.02e-38 150
MS.gene25695.t1 AT3G23790 23.713 641 406 17 138 726 112 721 1.24e-37 150
MS.gene25695.t1 AT4G19010 26.702 382 207 12 280 651 203 521 2.18e-21 99.4
MS.gene25695.t1 AT1G20500 23.472 409 245 12 279 682 195 540 3.77e-18 89.0
MS.gene25695.t1 AT1G20510 26.706 337 176 13 280 609 188 460 1.55e-15 80.5
MS.gene25695.t1 AT1G20510 26.706 337 176 13 280 609 188 460 1.72e-15 80.5
MS.gene25695.t1 AT4G05160 30.769 182 103 9 452 625 308 474 7.78e-12 68.9
MS.gene25695.t1 AT1G77240 43.956 91 46 2 534 624 390 475 8.58e-12 68.9
MS.gene25695.t1 AT5G16370 34.940 166 81 6 475 624 320 474 2.44e-11 67.4
MS.gene25695.t1 AT1G75960 33.333 198 91 8 449 624 296 474 2.67e-11 67.4
MS.gene25695.t1 AT5G16340 42.857 91 46 2 534 624 390 474 4.34e-11 66.6
MS.gene25695.t1 AT1G20560 33.562 146 60 5 534 655 394 526 5.22e-11 66.2
MS.gene25695.t1 AT1G20560 33.562 146 60 5 534 655 316 448 5.39e-11 66.2

Find 182 sgRNAs with CRISPR-Local

Find 427 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAGATCATCATTGAATT+TGG 0.119258 3.3:-69436560 None:intergenic
CATACACATAATAGATTTCT+TGG 0.222635 3.3:+69430814 MS.gene25695:CDS
CGCCGACTGGCTGCTGTAAA+AGG 0.237719 3.3:+69432710 MS.gene25695:CDS
CTTGGAACAAGGAAACTAAT+AGG 0.243114 3.3:+69430832 MS.gene25695:CDS
TCTGCCTTGTTGCTACATTA+AGG 0.248003 3.3:+69434507 MS.gene25695:CDS
GACAACTGCAACAGCATTCT+TGG 0.265044 3.3:-69431582 None:intergenic
TTGAATATCTGTGAAACATT+TGG 0.271360 3.3:+69430553 MS.gene25695:CDS
GCTCCTATTGGGCAAGGATA+TGG 0.311036 3.3:+69434412 MS.gene25695:CDS
TGTAATCGATACCAGTTTCT+TGG 0.316673 3.3:-69435425 None:intergenic
TGGTTGTATAGCTTGTTTCT+TGG 0.333016 3.3:+69434799 MS.gene25695:intron
GCCAACAGCTTAATCTTTGC+AGG 0.333841 3.3:-69436469 None:intergenic
AAGAAGACCGGATGCAAAAT+TGG 0.336190 3.3:-69430953 None:intergenic
TGTACTTAGGTGGAGGAAAA+AGG 0.338623 3.3:+69432650 MS.gene25695:intron
GCAGTAACTAATCCAGATTC+AGG 0.362669 3.3:-69436505 None:intergenic
AGGAAGCTGGCTAGGAGCTT+GGG 0.363799 3.3:+69432730 MS.gene25695:CDS
GAAAAGTGGGCCCAAGAAAC+TGG 0.381728 3.3:+69435414 MS.gene25695:CDS
AACCTCCGATTTATGCTTTG+TGG 0.383577 3.3:+69432815 MS.gene25695:CDS
GGTTGTATAGCTTGTTTCTT+GGG 0.384476 3.3:+69434800 MS.gene25695:intron
ACGTCCTTGCTACCTAGATT+TGG 0.387427 3.3:-69432082 None:intergenic
TGCAATCTGGAAAAGATTCT+TGG 0.387460 3.3:-69432681 None:intergenic
GATCCATGGACACCTGAATC+TGG 0.393722 3.3:+69436493 MS.gene25695:CDS
TGAATATCTGTGAAACATTT+GGG 0.397057 3.3:+69430554 MS.gene25695:CDS
CTATACTTCAGGGTTGCTTC+CGG 0.398189 3.3:+69431150 MS.gene25695:intron
AGAACCTCAGTGACAGCTTC+AGG 0.401094 3.3:-69435474 None:intergenic
TTGGAACAAGGAAACTAATA+GGG 0.401463 3.3:+69430833 MS.gene25695:CDS
CTGAGTTGGTTGAAGTTCCT+TGG 0.401688 3.3:+69430743 MS.gene25695:CDS
CATGGAGAATATATCTCTCT+TGG 0.401977 3.3:+69435168 MS.gene25695:CDS
TGTTGTGAATCTCCGGATAA+AGG 0.402833 3.3:-69432845 None:intergenic
AGGTAAAGTACGTGGTGTTC+CGG 0.403960 3.3:+69430672 MS.gene25695:CDS
GTAATCGATACCAGTTTCTT+GGG 0.404205 3.3:-69435424 None:intergenic
CACAGATCAGAGTAGATACT+TGG 0.405018 3.3:-69431367 None:intergenic
AACCATGAGGAACTACCGTT+TGG 0.405080 3.3:-69430523 None:intergenic
CGTAAAGCTGCTGAATAAAC+TGG 0.407665 3.3:+69431391 MS.gene25695:CDS
TAGCTGGTACCGCTGTCAAA+AGG 0.409142 3.3:-69432344 None:intergenic
ATGTCGACAGGGCTCCTATT+GGG 0.414413 3.3:+69434401 MS.gene25695:intron
CTTGCTGCAGGTGTTGCAAT+TGG 0.416381 3.3:+69432237 MS.gene25695:CDS
TTTGTGTTTGCTATAGTCAT+AGG 0.417727 3.3:+69430601 MS.gene25695:CDS
TCAGGTTTGTTACAGAGATC+AGG 0.420112 3.3:-69435456 None:intergenic
AAACCATATCCTTGCCCAAT+AGG 0.423025 3.3:-69434415 None:intergenic
GGTGGAAGTTAGTGGTGAAT+CGG 0.423699 3.3:+69430693 MS.gene25695:CDS
TTGAAAGATCATGGAGAACT+TGG 0.426060 3.3:+69430577 MS.gene25695:CDS
TAAAACTGATGAAGTGTTCA+AGG 0.430219 3.3:+69434920 MS.gene25695:CDS
ATGACTGTGGTTCCAAATCT+AGG 0.430718 3.3:+69432070 MS.gene25695:CDS
TCTTCCTATCGATGATTTCG+AGG 0.432227 3.3:-69435125 None:intergenic
GGTTTGACCGAAACATTTGC+TGG 0.435507 3.3:+69434433 MS.gene25695:CDS
ATATTAGCTAACCTTGGAAA+TGG 0.436276 3.3:-69435502 None:intergenic
TGAGTGGTTCATTGCCCTCC+AGG 0.439261 3.3:+69431029 MS.gene25695:CDS
TGTGGCGGAGCTCCTTTATC+CGG 0.439364 3.3:+69432833 MS.gene25695:CDS
TATGTCGACAGGGCTCCTAT+TGG 0.440792 3.3:+69434400 MS.gene25695:intron
AGCTTGGGGAGTGGAGAAGT+TGG 0.441224 3.3:+69432745 MS.gene25695:CDS
TTTGATGAAGTTGAGAAACT+TGG 0.442021 3.3:+69431527 MS.gene25695:CDS
ACATTTGGGTTGAAAGATCA+TGG 0.443508 3.3:+69430568 MS.gene25695:CDS
CCCATTCATATTCTCCTAAG+TGG 0.447435 3.3:-69430900 None:intergenic
AAGGAAGCTGGCTAGGAGCT+TGG 0.448056 3.3:+69432729 MS.gene25695:CDS
CGAGGAGAGGTTGTAGTTGG+CGG 0.449936 3.3:+69434861 MS.gene25695:CDS
TGATTATGTGGATAGTATAA+TGG 0.453234 3.3:+69435329 MS.gene25695:CDS
CTCCGCCACAAAGCATAAAT+CGG 0.459003 3.3:-69432820 None:intergenic
TCCACTTAGGAGAATATGAA+TGG 0.461774 3.3:+69430899 MS.gene25695:CDS
TACAAGTGGCAGTACAGGTC+TGG 0.462802 3.3:+69431610 MS.gene25695:CDS
TGTTGCTTCACGTCAGTCTC+TGG 0.465954 3.3:+69435392 MS.gene25695:CDS
CACGTCAGTCTCTGGAAAAG+TGG 0.472438 3.3:+69435400 MS.gene25695:CDS
TAAAACAGTAACATCTCCCT+TGG 0.480782 3.3:-69432313 None:intergenic
CTTGACTTTATTAGATGTAT+CGG 0.484873 3.3:-69432283 None:intergenic
GCAGGTGTTGCAATTGGTTA+CGG 0.484959 3.3:+69432243 MS.gene25695:CDS
ATGTATACAAGTGGCAGTAC+AGG 0.486721 3.3:+69431605 MS.gene25695:CDS
ATGATTTCGAGGCACCCATC+AGG 0.487435 3.3:-69435114 None:intergenic
TAGCTTGTTTCTTGGGAGGA+AGG 0.488889 3.3:+69434807 MS.gene25695:intron
GGCGGTTTCAGTGTGACAGC+TGG 0.489074 3.3:+69434879 MS.gene25695:CDS
GGAAGCCCCAGCAAATGTTT+CGG 0.490751 3.3:-69434440 None:intergenic
GCATCCGGTCTTCTTAAGCT+AGG 0.492666 3.3:+69430961 MS.gene25695:CDS
GTCGGCGCTTGTATGCAATC+TGG 0.495009 3.3:-69432694 None:intergenic
GCATTCTTGGAAGGTAAGCT+TGG 0.498121 3.3:-69431569 None:intergenic
TCCTGCAAAGATTAAGCTGT+TGG 0.498688 3.3:+69436468 MS.gene25695:CDS
GCTGTAAAAGGAAGCTGGCT+AGG 0.499568 3.3:+69432722 MS.gene25695:CDS
GATGTATCGGTCAAAGTCAT+AGG 0.500605 3.3:-69432270 None:intergenic
ACAACCTCTCCTCGTGGCAT+TGG 0.501085 3.3:-69434852 None:intergenic
CAGTCTGTTATGCTTGCTGC+AGG 0.501923 3.3:+69432225 MS.gene25695:intron
TTGTTACATCTAGTGATGGC+AGG 0.504006 3.3:+69430863 MS.gene25695:CDS
TTGATGAAGTTGAGAAACTT+GGG 0.504260 3.3:+69431528 MS.gene25695:CDS
GTCACTATTTATGCTTCTCT+AGG 0.504496 3.3:+69431188 MS.gene25695:CDS
GAATATGAATGGGAAACCTA+TGG 0.506008 3.3:+69430910 MS.gene25695:CDS
AGCTGGTACCGCTGTCAAAA+GGG 0.508384 3.3:-69432343 None:intergenic
CAATTCATCAATATCTGTGT+GGG 0.511071 3.3:+69432866 MS.gene25695:CDS
CGAATACGATCAATAATAGC+TGG 0.511436 3.3:-69432360 None:intergenic
AGGTAGCAAGGACGTGTACT+TGG 0.514433 3.3:+69432090 MS.gene25695:CDS
CAACATGACTATCTATATCA+TGG 0.516739 3.3:-69430984 None:intergenic
GAAGGTAAGCTTGGTTCGAC+GGG 0.517194 3.3:-69431560 None:intergenic
TTGTTTCTTGGGAGGAAGGA+GGG 0.520136 3.3:+69434811 MS.gene25695:CDS
GTGGAAGTTAGTGGTGAATC+GGG 0.522733 3.3:+69430694 MS.gene25695:CDS
TGCAAAGATTAAGCTGTTGG+CGG 0.525033 3.3:+69436471 MS.gene25695:CDS
TTAAGCTGTTGGCGGATCCA+TGG 0.527399 3.3:+69436479 MS.gene25695:CDS
GAGGCGGATGACTACAGTGT+GGG 0.530639 3.3:+69434469 MS.gene25695:CDS
GATGAATTGTTGTGAATCTC+CGG 0.530741 3.3:-69432852 None:intergenic
GACTACAGTGTGGGGCGTGT+TGG 0.533189 3.3:+69434478 MS.gene25695:CDS
AAAATCCGTACTGTACTTGG+AGG 0.533192 3.3:+69432791 MS.gene25695:CDS
GGGGAGTGGAGAAGTTGGTG+TGG 0.534428 3.3:+69432750 MS.gene25695:CDS
AGCAACACAGTAACTGTGAA+AGG 0.535609 3.3:-69435364 None:intergenic
TAATGCTCGATATTCTGAGT+TGG 0.537351 3.3:+69430729 MS.gene25695:CDS
TTGGTTGAAGTTCCTTGGAA+AGG 0.537578 3.3:+69430748 MS.gene25695:CDS
AATCCAGATTCAGGTGTCCA+TGG 0.538410 3.3:-69436496 None:intergenic
GGAAGGTAAGCTTGGTTCGA+CGG 0.539050 3.3:-69431561 None:intergenic
CGAAATCATCGATAGGAAGA+AGG 0.539942 3.3:+69435128 MS.gene25695:CDS
CCACGAGGAGAGGTTGTAGT+TGG 0.540876 3.3:+69434858 MS.gene25695:CDS
ATTATTGATCGTATTCGAGA+TGG 0.542337 3.3:+69432366 MS.gene25695:CDS
GTTTGACCGAAACATTTGCT+GGG 0.545833 3.3:+69434434 MS.gene25695:CDS
ACATCTAATAAAGTCAAGAA+AGG 0.548183 3.3:+69432288 MS.gene25695:CDS
CTTTGAAGACGATAGCAAAG+AGG 0.550034 3.3:+69431457 MS.gene25695:CDS
GGTGTTCCGGTGGAAGTTAG+TGG 0.553138 3.3:+69430685 MS.gene25695:CDS
GATTGCATACAAGCGCCGAC+TGG 0.553171 3.3:+69432697 MS.gene25695:CDS
CTGGCTAGGAGCTTGGGGAG+TGG 0.554245 3.3:+69432736 MS.gene25695:CDS
TGGCTGCTGTAAAAGGAAGC+TGG 0.554247 3.3:+69432717 MS.gene25695:CDS
GCAACACAGTAACTGTGAAA+GGG 0.555538 3.3:-69435363 None:intergenic
ATGGTTGGAGCTCCTTTCCA+AGG 0.557226 3.3:-69430760 None:intergenic
CCACTTAGGAGAATATGAAT+GGG 0.559347 3.3:+69430900 MS.gene25695:CDS
CACAACATGGTTGATCCAAA+CGG 0.559941 3.3:+69430508 None:intergenic
TTGGTACAGGTTGATGAGAA+AGG 0.560445 3.3:+69435051 MS.gene25695:intron
TGTATAGCTTGTTTCTTGGG+AGG 0.560995 3.3:+69434803 MS.gene25695:intron
GTAGTCATCCGCCTCAGAGA+AGG 0.561970 3.3:-69434461 None:intergenic
ATTGGGCGATTCCATCCTGA+TGG 0.563240 3.3:+69435099 MS.gene25695:CDS
ATCCAAACGGTAGTTCCTCA+TGG 0.563796 3.3:+69430521 MS.gene25695:CDS
CTTGTTTCTTGGGAGGAAGG+AGG 0.564982 3.3:+69434810 MS.gene25695:CDS
GGTTCTGCAGTCCATTTCCA+AGG 0.570740 3.3:+69435491 MS.gene25695:CDS
TAGGGTGTCATGATTACTCA+CGG 0.571010 3.3:+69432019 MS.gene25695:intron
AGTCATAACAGCTGCTGTGG+TGG 0.572176 3.3:-69432053 None:intergenic
AAAGTCAAGAAAGGAACCAA+GGG 0.572498 3.3:+69432297 MS.gene25695:CDS
CTCCGATTTATGCTTTGTGG+CGG 0.574946 3.3:+69432818 MS.gene25695:CDS
GGAAGCTGGCTAGGAGCTTG+GGG 0.577646 3.3:+69432731 MS.gene25695:CDS
ATGGCCTAGCTTAAGAAGAC+CGG 0.578394 3.3:-69430965 None:intergenic
TATTTATGCTTCTCTAGGTG+AGG 0.579878 3.3:+69431193 MS.gene25695:CDS
TGGGGCTTCCTTCTCTGAGG+CGG 0.583122 3.3:+69434453 MS.gene25695:CDS
TTGCTTCCGGCAGAATATAA+CGG 0.583359 3.3:+69431163 MS.gene25695:CDS
ATGTAGCAACAAGGCAGAGG+TGG 0.583582 3.3:-69434502 None:intergenic
CAAACCAATGCCACGAGGAG+AGG 0.584218 3.3:+69434848 MS.gene25695:CDS
GAGTTTGTTACATCTAGTGA+TGG 0.586545 3.3:+69430859 MS.gene25695:CDS
TGCTGGGGCTTCCTTCTCTG+AGG 0.587284 3.3:+69434450 MS.gene25695:CDS
CACAGTCATAACAGCTGCTG+TGG 0.588386 3.3:-69432056 None:intergenic
ACGTCAGTCTCTGGAAAAGT+GGG 0.590984 3.3:+69435401 MS.gene25695:CDS
TGACGACCGTTATATTCTGC+CGG 0.592201 3.3:-69431169 None:intergenic
GACAGGGCTCCTATTGGGCA+AGG 0.592990 3.3:+69434406 MS.gene25695:intron
TCAAATAAATGAGCCATGGT+TGG 0.593828 3.3:-69430775 None:intergenic
TTGGAAAGGAGCTCCAACCA+TGG 0.595344 3.3:+69430762 MS.gene25695:CDS
GGGAGTGGAGAAGTTGGTGT+GGG 0.596221 3.3:+69432751 MS.gene25695:CDS
ACTCGCGTCATGTGATTATG+TGG 0.596669 3.3:+69435317 MS.gene25695:CDS
AAATTTGAGAAAGTCCACTT+AGG 0.596901 3.3:+69430886 MS.gene25695:CDS
AACAAGGAAACTAATAGGGA+AGG 0.605953 3.3:+69430837 MS.gene25695:CDS
TTAATGTAGCAACAAGGCAG+AGG 0.606353 3.3:-69434505 None:intergenic
GTAAATCAAATTTACCTGGA+GGG 0.607805 3.3:-69431043 None:intergenic
TAAAGTACGTGGTGTTCCGG+TGG 0.609917 3.3:+69430675 MS.gene25695:CDS
ATAATAGATTTCTTGGAACA+AGG 0.610981 3.3:+69430821 MS.gene25695:CDS
TGGCAGTACAGGTCTGGCAA+AGG 0.612047 3.3:+69431616 MS.gene25695:CDS
TTGGGCGATTCCATCCTGAT+GGG 0.613633 3.3:+69435100 MS.gene25695:CDS
AGAATATATCTCTCTTGGAA+AGG 0.614954 3.3:+69435173 MS.gene25695:CDS
GATTCACCACTAACTTCCAC+CGG 0.619049 3.3:-69430691 None:intergenic
TTTCGAGGCACCCATCAGGA+TGG 0.619514 3.3:-69435110 None:intergenic
TTGATGAGAAAGGTGTGCGC+TGG 0.619594 3.3:+69435061 MS.gene25695:CDS
TAAAGTCAAGAAAGGAACCA+AGG 0.620329 3.3:+69432296 MS.gene25695:CDS
AGGGTGTCATGATTACTCAC+GGG 0.627268 3.3:+69432020 MS.gene25695:intron
ACTGCAACAGCATTCTTGGA+AGG 0.628272 3.3:-69431578 None:intergenic
GGTACCGCTGTCAAAAGGGT+AGG 0.628642 3.3:-69432339 None:intergenic
ACAATTCATCAATATCTGTG+TGG 0.629139 3.3:+69432865 MS.gene25695:CDS
GGTTCCAAATCTAGGTAGCA+AGG 0.630921 3.3:+69432078 MS.gene25695:CDS
GGTTGCCTCCAAGTACAGTA+CGG 0.636644 3.3:-69432796 None:intergenic
GCGAGCAAAGACCTCTCCAT+AGG 0.636648 3.3:-69430926 None:intergenic
CGCCACAAAGCATAAATCGG+AGG 0.647486 3.3:-69432817 None:intergenic
ACAGATCAGAGTAGATACTT+GGG 0.647919 3.3:-69431366 None:intergenic
TTTCTGATACTCGGGCTGAG+TGG 0.652876 3.3:+69431013 MS.gene25695:CDS
GGTGCCTCGAAATCATCGAT+AGG 0.654902 3.3:+69435121 MS.gene25695:CDS
AGGCGGATGACTACAGTGTG+GGG 0.656429 3.3:+69434470 MS.gene25695:CDS
TGAGGCGGATGACTACAGTG+TGG 0.657026 3.3:+69434468 MS.gene25695:CDS
TGAATGGGAAACCTATGGAG+AGG 0.663469 3.3:+69430915 MS.gene25695:CDS
CACAGCAGCTGTTATGACTG+TGG 0.670051 3.3:+69432057 MS.gene25695:CDS
TTTGACCGAAACATTTGCTG+GGG 0.671974 3.3:+69434435 MS.gene25695:CDS
GCAGTTGTCATGTATACAAG+TGG 0.673749 3.3:+69431596 MS.gene25695:CDS
TTGCTCAAATAAATGAGCCA+TGG 0.675815 3.3:-69430779 None:intergenic
GATATTGTCAAACTTCAACA+TGG 0.679599 3.3:+69435150 MS.gene25695:CDS
AAGAAGAAAGGTAAAGTACG+TGG 0.680735 3.3:+69430664 MS.gene25695:CDS
AATTCATCAATATCTGTGTG+GGG 0.681937 3.3:+69432867 MS.gene25695:CDS
TCTGATTCACTCACTGAACG+AGG 0.682120 3.3:+69431220 MS.gene25695:CDS
CATACCTTAATGTAGCAACA+AGG 0.689852 3.3:-69434511 None:intergenic
CAAACCTGAAGCTGTCACTG+AGG 0.724759 3.3:+69435470 MS.gene25695:CDS
CCAACTACAACCTCTCCTCG+TGG 0.726095 3.3:-69434858 None:intergenic
TCAGACAAACCAATGCCACG+AGG 0.775769 3.3:+69434843 MS.gene25695:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGATTTTGTTATTAATT+TGG + chr3.3:69434771-69434790 MS.gene25695:intron 10.0%
!!! TTTATTCTATATAGATTTTT+AGG + chr3.3:69431845-69431864 MS.gene25695:intron 10.0%
!! ATCTATAAATAAGTATAAGT+TGG - chr3.3:69434576-69434595 None:intergenic 15.0%
!!! ATTTGAAATTCAAATTAGTA+AGG + chr3.3:69433800-69433819 MS.gene25695:intron 15.0%
!!! TATTTTACTTTGTTAATTTC+AGG + chr3.3:69436411-69436430 MS.gene25695:intron 15.0%
!!! TGTTGATTTTTTATGAAAAT+CGG - chr3.3:69434242-69434261 None:intergenic 15.0%
!!! TTATCTATTATGTTTTAACA+AGG + chr3.3:69436344-69436363 MS.gene25695:intron 15.0%
!! AAAAATATCCTTGAAGTTAT+TGG + chr3.3:69433304-69433323 MS.gene25695:intron 20.0%
!! AATAGATAAAGCTCAATTTA+CGG - chr3.3:69436333-69436352 None:intergenic 20.0%
!! AGAACAAAAAATATATGTTG+TGG + chr3.3:69436121-69436140 MS.gene25695:intron 20.0%
!! ATTCATTCTTTAACTATTAC+TGG + chr3.3:69434284-69434303 MS.gene25695:intron 20.0%
!! ATTTGACAATTAAGACTTAA+AGG - chr3.3:69432170-69432189 None:intergenic 20.0%
!! CTAAAAGATTTCCAAAATAA+TGG + chr3.3:69433738-69433757 MS.gene25695:intron 20.0%
!! GCAACTAAAGAAAATTAAAA+GGG - chr3.3:69434983-69435002 None:intergenic 20.0%
!! GGTATATTCATGAATTAATA+CGG + chr3.3:69433845-69433864 MS.gene25695:intron 20.0%
!! TAACAACTTATCAAATCAAA+GGG - chr3.3:69431983-69432002 None:intergenic 20.0%
!! TAATGTCTTAAACTAATCAT+TGG + chr3.3:69432605-69432624 MS.gene25695:intron 20.0%
!! TACCACTATTATTAATATCA+TGG + chr3.3:69433094-69433113 MS.gene25695:intron 20.0%
!! TGCAACTAAAGAAAATTAAA+AGG - chr3.3:69434984-69435003 None:intergenic 20.0%
!! TTAACAACTTATCAAATCAA+AGG - chr3.3:69431984-69432003 None:intergenic 20.0%
!!! AATGATTAGTTTAAGACATT+AGG - chr3.3:69432606-69432625 None:intergenic 20.0%
!!! AATTATTATAGTTTTCATGC+TGG + chr3.3:69434624-69434643 MS.gene25695:intron 20.0%
!!! ACGGATTTTTTTAAAGATAA+TGG - chr3.3:69432780-69432799 None:intergenic 20.0%
!!! AGTCTTTCATTTTAATGTAA+TGG + chr3.3:69435280-69435299 MS.gene25695:intron 20.0%
!!! ATGATTAGTTTAAGACATTA+GGG - chr3.3:69432605-69432624 None:intergenic 20.0%
!!! ATGGTTTAGAATTTTGATTT+TGG - chr3.3:69433997-69434016 None:intergenic 20.0%
!!! ATTCTATATAGATTTTTAGG+TGG + chr3.3:69431848-69431867 MS.gene25695:intron 20.0%
!!! ATTTTATACCATGCATTATT+TGG + chr3.3:69432901-69432920 MS.gene25695:intron 20.0%
!!! GAAGAGAAATTAAACATTTT+CGG - chr3.3:69435647-69435666 None:intergenic 20.0%
!!! TCAGGTTTATTTTTAGTTTA+AGG + chr3.3:69435893-69435912 MS.gene25695:intron 20.0%
!!! TCTTAAACTTTTAGTAGAAT+TGG + chr3.3:69435796-69435815 MS.gene25695:intron 20.0%
!!! TTGCTTATACTTTTTTTCTT+CGG + chr3.3:69432998-69433017 MS.gene25695:intron 20.0%
!!! TTTCTTTGATTCCATTATTT+TGG - chr3.3:69433752-69433771 None:intergenic 20.0%
! AAAACTAATAACCATGACAT+TGG - chr3.3:69431748-69431767 None:intergenic 25.0%
! AACGTAAATTTCCATAGAAA+TGG - chr3.3:69434199-69434218 None:intergenic 25.0%
! ACATCTAATAAAGTCAAGAA+AGG + chr3.3:69432288-69432307 MS.gene25695:CDS 25.0%
! ATAATAGATTTCTTGGAACA+AGG + chr3.3:69430821-69430840 MS.gene25695:CDS 25.0%
! ATAGATAAAGCTCAATTTAC+GGG - chr3.3:69436332-69436351 None:intergenic 25.0%
! ATATTTAATTCTAGACGACA+TGG + chr3.3:69433491-69433510 MS.gene25695:intron 25.0%
! ATGCACATAATGACTTAATA+TGG - chr3.3:69431891-69431910 None:intergenic 25.0%
! CAAAGAATTATAACTCTAGT+CGG - chr3.3:69434372-69434391 None:intergenic 25.0%
! CAAGTTTAATAACCCTTATA+TGG + chr3.3:69436379-69436398 MS.gene25695:intron 25.0%
! CACCATGATATTAATAATAG+TGG - chr3.3:69433099-69433118 None:intergenic 25.0%
! CATACACATAATAGATTTCT+TGG + chr3.3:69430814-69430833 MS.gene25695:CDS 25.0%
! CTTGACTTTATTAGATGTAT+CGG - chr3.3:69432286-69432305 None:intergenic 25.0%
! GTCTTAATTGTCAAATTAGT+TGG + chr3.3:69432174-69432193 MS.gene25695:intron 25.0%
! GTTAAAGAATGAATCTCAAA+TGG - chr3.3:69434278-69434297 None:intergenic 25.0%
! TAATATCATGGTGATATTAG+TGG + chr3.3:69433106-69433125 MS.gene25695:intron 25.0%
! TCAATTCTATCAAAATGTAC+CGG + chr3.3:69433172-69433191 MS.gene25695:intron 25.0%
! TGAAAAATTTGCCTAAATTG+TGG + chr3.3:69433599-69433618 MS.gene25695:intron 25.0%
! TGAATATCTGTGAAACATTT+GGG + chr3.3:69430554-69430573 MS.gene25695:CDS 25.0%
! TGATTATGTGGATAGTATAA+TGG + chr3.3:69435329-69435348 MS.gene25695:CDS 25.0%
! TGTAGTAACTAAAAATAGTG+TGG + chr3.3:69431308-69431327 MS.gene25695:intron 25.0%
! TGTATTTATTTATGTCGACA+GGG + chr3.3:69434390-69434409 MS.gene25695:intron 25.0%
! TTAAATTTCAATACGAGATG+AGG - chr3.3:69433468-69433487 None:intergenic 25.0%
! TTACTATCATAATGCATTGA+TGG + chr3.3:69432484-69432503 MS.gene25695:intron 25.0%
! TTAGACTGCTTGAATATTTA+AGG + chr3.3:69435672-69435691 MS.gene25695:intron 25.0%
! TTGAATATCTGTGAAACATT+TGG + chr3.3:69430553-69430572 MS.gene25695:CDS 25.0%
! TTGGATTCAACAAAACATAA+AGG + chr3.3:69435747-69435766 MS.gene25695:intron 25.0%
! TTGTATTTATTTATGTCGAC+AGG + chr3.3:69434389-69434408 MS.gene25695:intron 25.0%
!! AAGTTTGTTTAAGACTATGT+TGG + chr3.3:69435728-69435747 MS.gene25695:intron 25.0%
!! AGACACAATATCAAAGATTT+TGG - chr3.3:69436086-69436105 None:intergenic 25.0%
!! AGATTCACAGTAAAATTTTC+AGG + chr3.3:69435247-69435266 MS.gene25695:intron 25.0%
!! CTACTAAAAGTTTAAGATGT+TGG - chr3.3:69435793-69435812 None:intergenic 25.0%
!! GATTCACAGTAAAATTTTCA+GGG + chr3.3:69435248-69435267 MS.gene25695:intron 25.0%
!! TAAAAGTTTAAGATGTTGGA+TGG - chr3.3:69435789-69435808 None:intergenic 25.0%
!! TTGTTATTAATTTGGTTCGT+TGG + chr3.3:69434779-69434798 MS.gene25695:intron 25.0%
!! TTTTTCTTAGGAAAGAAGAA+AGG + chr3.3:69430652-69430671 MS.gene25695:CDS 25.0%
!!! ATAATCTATCGATTTAATCC+TGG - chr3.3:69435555-69435574 None:intergenic 25.0%
!!! ATTTTTAGTTTAAGGAAGAC+TGG + chr3.3:69435901-69435920 MS.gene25695:intron 25.0%
!!! TAACCTTTTGTTATCGTTTA+GGG + chr3.3:69432001-69432020 MS.gene25695:intron 25.0%
!!! TCTTCTTCAAGTTTTGTTAA+AGG + chr3.3:69431645-69431664 MS.gene25695:intron 25.0%
!!! TGATTAGTTTAAGACATTAG+GGG - chr3.3:69432604-69432623 None:intergenic 25.0%
!!! TTAACCTTTTGTTATCGTTT+AGG + chr3.3:69432000-69432019 MS.gene25695:intron 25.0%
!!! TTGTTTTCGGTTTTTTTCTT+AGG + chr3.3:69430640-69430659 MS.gene25695:CDS 25.0%
!!! TTTCATTTTAATGTAATGGC+AGG + chr3.3:69435284-69435303 MS.gene25695:intron 25.0%
!!! TTTTGATTTTGGCAGAATTT+TGG - chr3.3:69433986-69434005 None:intergenic 25.0%
AAAAAAACCGAAAACAAGAC+AGG - chr3.3:69430637-69430656 None:intergenic 30.0%
AAAAAAATCCGTACTGTACT+TGG + chr3.3:69432788-69432807 MS.gene25695:CDS 30.0%
AAAGAGAAAAGAGAAAAGAG+AGG - chr3.3:69434020-69434039 None:intergenic 30.0%
AAATTTGAGAAAGTCCACTT+AGG + chr3.3:69430886-69430905 MS.gene25695:CDS 30.0%
AAGTTATACCAAGACAAAGT+CGG - chr3.3:69431827-69431846 None:intergenic 30.0%
AATAACCCTTATATGGTAGA+TGG + chr3.3:69436386-69436405 MS.gene25695:intron 30.0%
AATAAGCCATCTACCATATA+AGG - chr3.3:69436395-69436414 None:intergenic 30.0%
AATATCCTTGAAGTTATTGG+AGG + chr3.3:69433307-69433326 MS.gene25695:intron 30.0%
AATTCATCAATATCTGTGTG+GGG + chr3.3:69432867-69432886 MS.gene25695:CDS 30.0%
ACAATTCATCAATATCTGTG+TGG + chr3.3:69432865-69432884 MS.gene25695:CDS 30.0%
ACAGACTATCAACAGTATTT+CGG + chr3.3:69433270-69433289 MS.gene25695:intron 30.0%
AGAATATATCTCTCTTGGAA+AGG + chr3.3:69435173-69435192 MS.gene25695:CDS 30.0%
AGTCATTATGTGCATATGAT+TGG + chr3.3:69431896-69431915 MS.gene25695:intron 30.0%
AGTGGTTAAATAACTGATTG+TGG - chr3.3:69433631-69433650 None:intergenic 30.0%
ATAAACCTGATTCAGAAGTA+TGG - chr3.3:69435883-69435902 None:intergenic 30.0%
ATAAGCCATCTACCATATAA+GGG - chr3.3:69436394-69436413 None:intergenic 30.0%
ATAGAGACTACTAAAAAAGG+TGG + chr3.3:69436263-69436282 MS.gene25695:intron 30.0%
ATATCCTTGAAGTTATTGGA+GGG + chr3.3:69433308-69433327 MS.gene25695:intron 30.0%
ATATTAGCTAACCTTGGAAA+TGG - chr3.3:69435505-69435524 None:intergenic 30.0%
ATGTTCATGTTTAAAGGGAT+GGG + chr3.3:69436298-69436317 MS.gene25695:intron 30.0%
ATTATTGATCGTATTCGAGA+TGG + chr3.3:69432366-69432385 MS.gene25695:CDS 30.0%
ATTTCAAAAACATGAGCAAG+GGG - chr3.3:69432124-69432143 None:intergenic 30.0%
CAACATGACTATCTATATCA+TGG - chr3.3:69430987-69431006 None:intergenic 30.0%
CAATTCATCAATATCTGTGT+GGG + chr3.3:69432866-69432885 MS.gene25695:CDS 30.0%
CATTTCAAAAACATGAGCAA+GGG - chr3.3:69432125-69432144 None:intergenic 30.0%
CCAATAGAGACTACTAAAAA+AGG + chr3.3:69436260-69436279 MS.gene25695:intron 30.0%
CTAAAATGTATGTCTCTTCA+TGG + chr3.3:69433777-69433796 MS.gene25695:intron 30.0%
CTATTTATGAGCCTCAAATA+GGG + chr3.3:69434744-69434763 MS.gene25695:intron 30.0%
CTCTTACCTATATTGTACTT+AGG + chr3.3:69432637-69432656 MS.gene25695:intron 30.0%
CTGAAGATCATCATTGAATT+TGG - chr3.3:69436563-69436582 None:intergenic 30.0%
GATATTGTCAAACTTCAACA+TGG + chr3.3:69435150-69435169 MS.gene25695:CDS 30.0%
GCAAGATGTTCATGTTTAAA+GGG + chr3.3:69436293-69436312 MS.gene25695:intron 30.0%
GTAAATCAAATTTACCTGGA+GGG - chr3.3:69431046-69431065 None:intergenic 30.0%
GTCTTCTTTCATGATTGAAT+GGG + chr3.3:69433824-69433843 MS.gene25695:intron 30.0%
TATACCATGCATTATTTGGT+TGG + chr3.3:69432905-69432924 MS.gene25695:intron 30.0%
TATTCCACTAGATAGGATAA+AGG + chr3.3:69434052-69434071 MS.gene25695:intron 30.0%
TATTTATGAGCCTCAAATAG+GGG + chr3.3:69434745-69434764 MS.gene25695:intron 30.0%
TCATAGCTATCAATGTCAAT+AGG - chr3.3:69431932-69431951 None:intergenic 30.0%
TGAGTCTTGAAAGTTGTTTA+AGG - chr3.3:69434088-69434107 None:intergenic 30.0%
TGCAAGATGTTCATGTTTAA+AGG + chr3.3:69436292-69436311 MS.gene25695:intron 30.0%
TGGTGAGTAGTAAAACTTAT+TGG + chr3.3:69434644-69434663 MS.gene25695:intron 30.0%
TGTCTTCTTTCATGATTGAA+TGG + chr3.3:69433823-69433842 MS.gene25695:intron 30.0%
TTACCTATATTGTACTTAGG+TGG + chr3.3:69432640-69432659 MS.gene25695:intron 30.0%
TTGAAAAGTGGCTATCAAAT+TGG - chr3.3:69432537-69432556 None:intergenic 30.0%
TTGATGAAGTTGAGAAACTT+GGG + chr3.3:69431528-69431547 MS.gene25695:CDS 30.0%
TTGGAACAAGGAAACTAATA+GGG + chr3.3:69430833-69430852 MS.gene25695:CDS 30.0%
TTTATCCTATCTAGTGGAAT+AGG - chr3.3:69434053-69434072 None:intergenic 30.0%
TTTGATGAAGTTGAGAAACT+TGG + chr3.3:69431527-69431546 MS.gene25695:CDS 30.0%
! AAAAGTATAAGCAACTCAAG+AGG - chr3.3:69432992-69433011 None:intergenic 30.0%
! AAATGTTTTGTCCAATGTCA+TGG + chr3.3:69431734-69431753 MS.gene25695:intron 30.0%
! ATTCAAACTTTTCAACCATG+AGG - chr3.3:69430539-69430558 None:intergenic 30.0%
! TAAAACTGATGAAGTGTTCA+AGG + chr3.3:69434920-69434939 MS.gene25695:CDS 30.0%
! TATTGACATTGATAGCTATG+AGG + chr3.3:69431931-69431950 MS.gene25695:intron 30.0%
! TGTTCATATTTGTGATTTGC+TGG + chr3.3:69431702-69431721 MS.gene25695:intron 30.0%
! TTTTCCTTTATCCTATCTAG+TGG - chr3.3:69434059-69434078 None:intergenic 30.0%
!! ACAATATCAAAGATTTTGGC+TGG - chr3.3:69436082-69436101 None:intergenic 30.0%
!! AGTTATTTCTCTTAACCATG+TGG + chr3.3:69433913-69433932 MS.gene25695:intron 30.0%
!! GTAACATGTAATTGACTTGA+TGG - chr3.3:69431961-69431980 None:intergenic 30.0%
!! TTTGTGTTTGCTATAGTCAT+AGG + chr3.3:69430601-69430620 MS.gene25695:CDS 30.0%
!!! CCTTTTTTAGTAGTCTCTAT+TGG - chr3.3:69436263-69436282 None:intergenic 30.0%
!!! TTGCGATTTTTTCTGATACT+CGG + chr3.3:69431004-69431023 MS.gene25695:CDS 30.0%
AAAATGACAGAAACTCATCC+CGG + chr3.3:69436213-69436232 MS.gene25695:intron 35.0%
AAAGTCAAGAAAGGAACCAA+GGG + chr3.3:69432297-69432316 MS.gene25695:CDS 35.0%
AACAACTTTCAAGACTCATG+AGG + chr3.3:69434090-69434109 MS.gene25695:intron 35.0%
AACAAGGAAACTAATAGGGA+AGG + chr3.3:69430837-69430856 MS.gene25695:CDS 35.0%
AACAAGTTCAGCTTGTGAAT+TGG - chr3.3:69433546-69433565 None:intergenic 35.0%
AAGAAGAAAGGTAAAGTACG+TGG + chr3.3:69430664-69430683 MS.gene25695:CDS 35.0%
AATTACAGGTCATAGCTCAA+AGG - chr3.3:69433208-69433227 None:intergenic 35.0%
AATTTCAATACGAGATGAGG+TGG - chr3.3:69433465-69433484 None:intergenic 35.0%
ACAACTTTCAAGACTCATGA+GGG + chr3.3:69434091-69434110 MS.gene25695:intron 35.0%
ACACCCTAAACGATAACAAA+AGG - chr3.3:69432007-69432026 None:intergenic 35.0%
ACAGATCAGAGTAGATACTT+GGG - chr3.3:69431369-69431388 None:intergenic 35.0%
ACATTAGGGGAAAGTGAAAA+AGG - chr3.3:69432591-69432610 None:intergenic 35.0%
AGAAAAGAGAAAAGAGAGGA+TGG - chr3.3:69434016-69434035 None:intergenic 35.0%
AGCAATTCGTGATTGAAAAG+TGG - chr3.3:69432549-69432568 None:intergenic 35.0%
AGTTCCAACCAAATAATGCA+TGG - chr3.3:69432912-69432931 None:intergenic 35.0%
ATCCACATATTAGCTAACCT+TGG - chr3.3:69435511-69435530 None:intergenic 35.0%
ATGCTGTCTCTAAATTACTC+TGG + chr3.3:69432197-69432216 MS.gene25695:intron 35.0%
ATTCTAGACGACATGGTATT+AGG + chr3.3:69433498-69433517 MS.gene25695:intron 35.0%
ATTTATGAGCCTCAAATAGG+GGG + chr3.3:69434746-69434765 MS.gene25695:intron 35.0%
ATTTGAGGGTGGATAGAATA+TGG - chr3.3:69435929-69435948 None:intergenic 35.0%
CAGAAATTGATGAATAACGC+TGG - chr3.3:69433150-69433169 None:intergenic 35.0%
CAGACTATCAACAGTATTTC+GGG + chr3.3:69433271-69433290 MS.gene25695:intron 35.0%
CAGCGTTATTCATCAATTTC+TGG + chr3.3:69433148-69433167 MS.gene25695:intron 35.0%
CATACCTTAATGTAGCAACA+AGG - chr3.3:69434514-69434533 None:intergenic 35.0%
CATGGAGAATATATCTCTCT+TGG + chr3.3:69435168-69435187 MS.gene25695:CDS 35.0%
CCACTTAGGAGAATATGAAT+GGG + chr3.3:69430900-69430919 MS.gene25695:CDS 35.0%
CCATTTCAAAAACATGAGCA+AGG - chr3.3:69432126-69432145 None:intergenic 35.0%
CGAATACGATCAATAATAGC+TGG - chr3.3:69432363-69432382 None:intergenic 35.0%
CGATATAAGCCTCAAGTTAA+TGG - chr3.3:69431092-69431111 None:intergenic 35.0%
CTTGGAACAAGGAAACTAAT+AGG + chr3.3:69430832-69430851 MS.gene25695:CDS 35.0%
GAATATGAATGGGAAACCTA+TGG + chr3.3:69430910-69430929 MS.gene25695:CDS 35.0%
GATGAATTGTTGTGAATCTC+CGG - chr3.3:69432855-69432874 None:intergenic 35.0%
GATGTTCATGTTTAAAGGGA+TGG + chr3.3:69436297-69436316 MS.gene25695:intron 35.0%
GCTATTTATGAGCCTCAAAT+AGG + chr3.3:69434743-69434762 MS.gene25695:intron 35.0%
GCTGGTAAATCAAATTTACC+TGG - chr3.3:69431050-69431069 None:intergenic 35.0%
GGTAAATCAAATTTACCTGG+AGG - chr3.3:69431047-69431066 None:intergenic 35.0%
GGTTAAATAACTGATTGTGG+TGG - chr3.3:69433628-69433647 None:intergenic 35.0%
GTAATCGATACCAGTTTCTT+GGG - chr3.3:69435427-69435446 None:intergenic 35.0%
GTCACTATTTATGCTTCTCT+AGG + chr3.3:69431188-69431207 MS.gene25695:CDS 35.0%
TAAAACAGTAACATCTCCCT+TGG - chr3.3:69432316-69432335 None:intergenic 35.0%
TAAAGTCAAGAAAGGAACCA+AGG + chr3.3:69432296-69432315 MS.gene25695:CDS 35.0%
TAATGCTCGATATTCTGAGT+TGG + chr3.3:69430729-69430748 MS.gene25695:CDS 35.0%
TACGTTCTATAGTAAGCATC+AGG - chr3.3:69431779-69431798 None:intergenic 35.0%
TAGTTCCTATTCCACTAGAT+AGG + chr3.3:69434045-69434064 MS.gene25695:intron 35.0%
TATCCTTGAAGTTATTGGAG+GGG + chr3.3:69433309-69433328 MS.gene25695:intron 35.0%
TATTTATGCTTCTCTAGGTG+AGG + chr3.3:69431193-69431212 MS.gene25695:CDS 35.0%
TCAAATAAATGAGCCATGGT+TGG - chr3.3:69430778-69430797 None:intergenic 35.0%
TCCACTTAGGAGAATATGAA+TGG + chr3.3:69430899-69430918 MS.gene25695:CDS 35.0%
TCGAGATGGAGTTGTAAAAA+AGG + chr3.3:69432380-69432399 MS.gene25695:CDS 35.0%
TGCAATCTGGAAAAGATTCT+TGG - chr3.3:69432684-69432703 None:intergenic 35.0%
TGTAATCGATACCAGTTTCT+TGG - chr3.3:69435428-69435447 None:intergenic 35.0%
TTCTAGACGACATGGTATTA+GGG + chr3.3:69433499-69433518 MS.gene25695:intron 35.0%
TTGAAAGATCATGGAGAACT+TGG + chr3.3:69430577-69430596 MS.gene25695:CDS 35.0%
TTGCTCAAATAAATGAGCCA+TGG - chr3.3:69430782-69430801 None:intergenic 35.0%
TTTAATGTAATGGCAGGTTG+AGG + chr3.3:69435290-69435309 MS.gene25695:intron 35.0%
TTTGAGGGTGGATAGAATAT+GGG - chr3.3:69435928-69435947 None:intergenic 35.0%
! AAGTTTAAGATGTTGGATGG+AGG - chr3.3:69435786-69435805 None:intergenic 35.0%
! GTCTGTTTGACTCTATTTTG+AGG - chr3.3:69433256-69433275 None:intergenic 35.0%
! GTCTTGTTAGATATCTGGAT+AGG + chr3.3:69432506-69432525 MS.gene25695:intron 35.0%
! TGACTCATTCCATTAACTTG+AGG + chr3.3:69431080-69431099 MS.gene25695:intron 35.0%
! TTCCAAGGTTAGCTAATATG+TGG + chr3.3:69435506-69435525 MS.gene25695:intron 35.0%
! TTGTGAATTGGCTCATAACA+TGG - chr3.3:69433534-69433553 None:intergenic 35.0%
!! ACATTTGGGTTGAAAGATCA+TGG + chr3.3:69430568-69430587 MS.gene25695:CDS 35.0%
!! ACTTGCTATGCTATACTTCA+GGG + chr3.3:69431140-69431159 MS.gene25695:intron 35.0%
!! CACAACATAGGCTTTTGAAA+TGG - chr3.3:69433365-69433384 None:intergenic 35.0%
!! CCTTGCTCATGTTTTTGAAA+TGG + chr3.3:69432123-69432142 MS.gene25695:CDS 35.0%
!! GAGTTTGTTACATCTAGTGA+TGG + chr3.3:69430859-69430878 MS.gene25695:CDS 35.0%
!! GGTTTTATACTGGTGACATT+GGG + chr3.3:69435082-69435101 MS.gene25695:CDS 35.0%
!! GTGATTTTTCAACTTGGTAC+AGG + chr3.3:69435038-69435057 MS.gene25695:intron 35.0%
!! TACTTGCTATGCTATACTTC+AGG + chr3.3:69431139-69431158 MS.gene25695:intron 35.0%
!! TAGCACGTGATTTTTCAACT+TGG + chr3.3:69435032-69435051 MS.gene25695:intron 35.0%
!! TGATGGTCTTGTTAGATATC+TGG + chr3.3:69432501-69432520 MS.gene25695:intron 35.0%
!!! ACATAGGCTTTTGAAATGGT+TGG - chr3.3:69433361-69433380 None:intergenic 35.0%
!!! CATTGTTCCTGTCTTGTTTT+CGG + chr3.3:69430627-69430646 MS.gene25695:CDS 35.0%
!!! TATTTTGAGGTACTCAAACC+TGG - chr3.3:69433243-69433262 None:intergenic 35.0%
!!! TCTTTTAGAGTCATATCCCT+AGG - chr3.3:69433726-69433745 None:intergenic 35.0%
!!! TGCGATTTTTTCTGATACTC+GGG + chr3.3:69431005-69431024 MS.gene25695:CDS 35.0%
!!! TGGTTTTATACTGGTGACAT+TGG + chr3.3:69435081-69435100 MS.gene25695:CDS 35.0%
AAAATCCGTACTGTACTTGG+AGG + chr3.3:69432791-69432810 MS.gene25695:CDS 40.0%
AAACCATATCCTTGCCCAAT+AGG - chr3.3:69434418-69434437 None:intergenic 40.0%
AACCTCCGATTTATGCTTTG+TGG + chr3.3:69432815-69432834 MS.gene25695:CDS 40.0%
AACTCTAGTCGGACAAAAAG+AGG - chr3.3:69434361-69434380 None:intergenic 40.0%
AAGAAGACCGGATGCAAAAT+TGG - chr3.3:69430956-69430975 None:intergenic 40.0%
AGACGCTCAAACCATTTCTA+TGG + chr3.3:69434185-69434204 MS.gene25695:intron 40.0%
AGCAACACAGTAACTGTGAA+AGG - chr3.3:69435367-69435386 None:intergenic 40.0%
ATAGAGAACCACATACCACA+TGG - chr3.3:69433931-69433950 None:intergenic 40.0%
ATCAAATTCCCCCCTATTTG+AGG - chr3.3:69434758-69434777 None:intergenic 40.0%
ATGACTGTGGTTCCAAATCT+AGG + chr3.3:69432070-69432089 MS.gene25695:CDS 40.0%
ATGAGTCAACGAAATGAAGC+TGG - chr3.3:69431068-69431087 None:intergenic 40.0%
ATGTATACAAGTGGCAGTAC+AGG + chr3.3:69431605-69431624 MS.gene25695:CDS 40.0%
CAACTTTCAAGACTCATGAG+GGG + chr3.3:69434092-69434111 MS.gene25695:intron 40.0%
CACAACACCTTTAGTGTGTT+GGG + chr3.3:69433673-69433692 MS.gene25695:intron 40.0%
CACAGATCAGAGTAGATACT+TGG - chr3.3:69431370-69431389 None:intergenic 40.0%
CATGAGAGACTAGAAAGAGA+AGG - chr3.3:69434161-69434180 None:intergenic 40.0%
CCATTCATGTAGCACAACAT+AGG - chr3.3:69433377-69433396 None:intergenic 40.0%
CCCATTCATATTCTCCTAAG+TGG - chr3.3:69430903-69430922 None:intergenic 40.0%
CCTATATTGTACTTAGGTGG+AGG + chr3.3:69432643-69432662 MS.gene25695:intron 40.0%
CCTATGTTGTGCTACATGAA+TGG + chr3.3:69433374-69433393 MS.gene25695:intron 40.0%
CCTCCACCTAAGTACAATAT+AGG - chr3.3:69432646-69432665 None:intergenic 40.0%
CGAAATCATCGATAGGAAGA+AGG + chr3.3:69435128-69435147 MS.gene25695:CDS 40.0%
CGCAGATGAAAATGTTGATG+TGG - chr3.3:69432419-69432438 None:intergenic 40.0%
CGTAAAGCTGCTGAATAAAC+TGG + chr3.3:69431391-69431410 MS.gene25695:CDS 40.0%
CTAGAAAGAGAAGGATGCAA+TGG - chr3.3:69434152-69434171 None:intergenic 40.0%
GATGCAATGGATAGTTCACA+AGG - chr3.3:69434139-69434158 None:intergenic 40.0%
GCAACACAGTAACTGTGAAA+GGG - chr3.3:69435366-69435385 None:intergenic 40.0%
GCAGTAACTAATCCAGATTC+AGG - chr3.3:69436508-69436527 None:intergenic 40.0%
GCAGTTGTCATGTATACAAG+TGG + chr3.3:69431596-69431615 MS.gene25695:CDS 40.0%
GCTGTTATAGAACTTGCAGT+TGG + chr3.3:69434719-69434738 MS.gene25695:intron 40.0%
GTGGATAGTTACTTGTTTGC+TGG + chr3.3:69435525-69435544 MS.gene25695:intron 40.0%
GTTTGACCGAAACATTTGCT+GGG + chr3.3:69434434-69434453 MS.gene25695:CDS 40.0%
TCCTGCAAAGATTAAGCTGT+TGG + chr3.3:69436468-69436487 MS.gene25695:CDS 40.0%
TCGGCGTCTTAATTTAAGTG+TGG - chr3.3:69435628-69435647 None:intergenic 40.0%
TCTAGACGACATGGTATTAG+GGG + chr3.3:69433500-69433519 MS.gene25695:intron 40.0%
TCTCTTAACCATGTGGTATG+TGG + chr3.3:69433920-69433939 MS.gene25695:intron 40.0%
TCTTCCTATCGATGATTTCG+AGG - chr3.3:69435128-69435147 None:intergenic 40.0%
TCTTGACCATTAGGTCATTG+CGG - chr3.3:69435842-69435861 None:intergenic 40.0%
TGATCACTCTCTTGACCATT+AGG - chr3.3:69435851-69435870 None:intergenic 40.0%
TGCAAAGATTAAGCTGTTGG+CGG + chr3.3:69436471-69436490 MS.gene25695:CDS 40.0%
TGTACTTAGGTGGAGGAAAA+AGG + chr3.3:69432650-69432669 MS.gene25695:intron 40.0%
TGTGCGTATGCATATGTAGT+TGG + chr3.3:69432955-69432974 MS.gene25695:intron 40.0%
TGTGGATAAGAATGCTGATG+TGG + chr3.3:69436139-69436158 MS.gene25695:intron 40.0%
TGTTGTGAATCTCCGGATAA+AGG - chr3.3:69432848-69432867 None:intergenic 40.0%
TTAATGTAGCAACAAGGCAG+AGG - chr3.3:69434508-69434527 None:intergenic 40.0%
TTGCTTCCGGCAGAATATAA+CGG + chr3.3:69431163-69431182 MS.gene25695:CDS 40.0%
TTGGTTGAAGTTCCTTGGAA+AGG + chr3.3:69430748-69430767 MS.gene25695:CDS 40.0%
TTGTTACATCTAGTGATGGC+AGG + chr3.3:69430863-69430882 MS.gene25695:CDS 40.0%
TTTATGAGCCTCAAATAGGG+GGG + chr3.3:69434747-69434766 MS.gene25695:intron 40.0%
! AAAACCTACCCTTTTGACAG+CGG + chr3.3:69432335-69432354 MS.gene25695:CDS 40.0%
! CTGATTCAGAAGTATGGATG+CGG - chr3.3:69435877-69435896 None:intergenic 40.0%
! CTTTGAAGACGATAGCAAAG+AGG + chr3.3:69431457-69431476 MS.gene25695:CDS 40.0%
! GATGTATCGGTCAAAGTCAT+AGG - chr3.3:69432273-69432292 None:intergenic 40.0%
! TAGGGTGTCATGATTACTCA+CGG + chr3.3:69432019-69432038 MS.gene25695:intron 40.0%
! TCTGCCTTGTTGCTACATTA+AGG + chr3.3:69434507-69434526 MS.gene25695:CDS 40.0%
! TGAAGCGCTCTTGCATTATA+GGG + chr3.3:69435950-69435969 MS.gene25695:intron 40.0%
! TTGAAGCGCTCTTGCATTAT+AGG + chr3.3:69435949-69435968 MS.gene25695:intron 40.0%
! TTGTGCACATGATTCGAGTT+GGG + chr3.3:69435976-69435995 MS.gene25695:intron 40.0%
! TTTAGAGTCATATCCCTAGG+CGG - chr3.3:69433723-69433742 None:intergenic 40.0%
! TTTGACCGAAACATTTGCTG+GGG + chr3.3:69434435-69434454 MS.gene25695:CDS 40.0%
!! CAAGAGCGCTTCAAATTTGA+GGG - chr3.3:69435943-69435962 None:intergenic 40.0%
!! TCAGGTTTGTTACAGAGATC+AGG - chr3.3:69435459-69435478 None:intergenic 40.0%
!! TTGGTACAGGTTGATGAGAA+AGG + chr3.3:69435051-69435070 MS.gene25695:intron 40.0%
!!! GAGGAACATGCTTTTTCAGA+AGG + chr3.3:69431476-69431495 MS.gene25695:CDS 40.0%
!!! TGTTTTTGAAATGGCAGCAG+AGG + chr3.3:69432132-69432151 MS.gene25695:CDS 40.0%
AACCATGAGGAACTACCGTT+TGG - chr3.3:69430526-69430545 None:intergenic 45.0%
AATCCAGATTCAGGTGTCCA+TGG - chr3.3:69436499-69436518 None:intergenic 45.0%
ACACCCCTCCAATAACTTCA+AGG - chr3.3:69433315-69433334 None:intergenic 45.0%
ACGTCCTTGCTACCTAGATT+TGG - chr3.3:69432085-69432104 None:intergenic 45.0%
ACTCGCGTCATGTGATTATG+TGG + chr3.3:69435317-69435336 MS.gene25695:CDS 45.0%
ACTGCAACAGCATTCTTGGA+AGG - chr3.3:69431581-69431600 None:intergenic 45.0%
ACTTAGGTGGAGGAAAAAGG+AGG + chr3.3:69432653-69432672 MS.gene25695:intron 45.0%
AGGTAAAGTACGTGGTGTTC+CGG + chr3.3:69430672-69430691 MS.gene25695:CDS 45.0%
ATCCAAACGGTAGTTCCTCA+TGG + chr3.3:69430521-69430540 MS.gene25695:CDS 45.0%
ATGGCCTAGCTTAAGAAGAC+CGG - chr3.3:69430968-69430987 None:intergenic 45.0%
CGCATCCATACTTCTGAATC+AGG + chr3.3:69435875-69435894 MS.gene25695:intron 45.0%
CTATACTTCAGGGTTGCTTC+CGG + chr3.3:69431150-69431169 MS.gene25695:intron 45.0%
CTCCGATTTATGCTTTGTGG+CGG + chr3.3:69432818-69432837 MS.gene25695:CDS 45.0%
CTCCGCCACAAAGCATAAAT+CGG - chr3.3:69432823-69432842 None:intergenic 45.0%
GACAACTGCAACAGCATTCT+TGG - chr3.3:69431585-69431604 None:intergenic 45.0%
GACCTGTAATTTCACACGTG+AGG + chr3.3:69433217-69433236 MS.gene25695:intron 45.0%
GAGTTGGGTGGATGAAATAG+AGG + chr3.3:69435991-69436010 MS.gene25695:intron 45.0%
GATTCACCACTAACTTCCAC+CGG - chr3.3:69430694-69430713 None:intergenic 45.0%
GCACAACACCTTTAGTGTGT+TGG + chr3.3:69433672-69433691 MS.gene25695:intron 45.0%
GCATTCTTGGAAGGTAAGCT+TGG - chr3.3:69431572-69431591 None:intergenic 45.0%
GCCAACAGCTTAATCTTTGC+AGG - chr3.3:69436472-69436491 None:intergenic 45.0%
GGTGGAAGTTAGTGGTGAAT+CGG + chr3.3:69430693-69430712 MS.gene25695:CDS 45.0%
GGTTCCAAATCTAGGTAGCA+AGG + chr3.3:69432078-69432097 MS.gene25695:CDS 45.0%
GGTTTGACCGAAACATTTGC+TGG + chr3.3:69434433-69434452 MS.gene25695:CDS 45.0%
GTGGAAGTTAGTGGTGAATC+GGG + chr3.3:69430694-69430713 MS.gene25695:CDS 45.0%
GTTGGATGGAGGTTGTGTAA+TGG - chr3.3:69435775-69435794 None:intergenic 45.0%
GTTGTGCACATGATTCGAGT+TGG + chr3.3:69435975-69435994 MS.gene25695:intron 45.0%
TCACCATGTGAGCTAATCAC+CGG - chr3.3:69436235-69436254 None:intergenic 45.0%
TCTGATTCACTCACTGAACG+AGG + chr3.3:69431220-69431239 MS.gene25695:CDS 45.0%
TGAATGGGAAACCTATGGAG+AGG + chr3.3:69430915-69430934 MS.gene25695:CDS 45.0%
TGACGACCGTTATATTCTGC+CGG - chr3.3:69431172-69431191 None:intergenic 45.0%
TGTGGTGGTTGCCACAATTT+AGG - chr3.3:69433613-69433632 None:intergenic 45.0%
TTGAAGTTATTGGAGGGGTG+TGG + chr3.3:69433314-69433333 MS.gene25695:intron 45.0%
! ACCTTTAGTGTGTTGGGTTG+AGG + chr3.3:69433679-69433698 MS.gene25695:intron 45.0%
! ACGTCAGTCTCTGGAAAAGT+GGG + chr3.3:69435401-69435420 MS.gene25695:CDS 45.0%
! AGCTGAACTTGTTCAGTGAC+TGG + chr3.3:69433553-69433572 MS.gene25695:intron 45.0%
! AGGGTGTCATGATTACTCAC+GGG + chr3.3:69432020-69432039 MS.gene25695:intron 45.0%
! CGACATGGTATTAGGGGTTT+TGG + chr3.3:69433506-69433525 MS.gene25695:intron 45.0%
! GCAGGTGTTGCAATTGGTTA+CGG + chr3.3:69432243-69432262 MS.gene25695:CDS 45.0%
! TACTTGTTTGCTGGCTATCC+AGG + chr3.3:69435534-69435553 MS.gene25695:intron 45.0%
! TGAAGTTATTGGAGGGGTGT+GGG + chr3.3:69433315-69433334 MS.gene25695:intron 45.0%
! TTCCTTTTACAGCAGCCAGT+CGG - chr3.3:69432715-69432734 None:intergenic 45.0%
!! ACACTAAAGGTGTTGTGCCA+GGG - chr3.3:69433670-69433689 None:intergenic 45.0%
!! CCTTTAGTGTGTTGGGTTGA+GGG + chr3.3:69433680-69433699 MS.gene25695:intron 45.0%
!! CTGAGTTGGTTGAAGTTCCT+TGG + chr3.3:69430743-69430762 MS.gene25695:CDS 45.0%
!! GCAAGAGCGCTTCAAATTTG+AGG - chr3.3:69435944-69435963 None:intergenic 45.0%
!! GTCGTGATTCTAGAACGACA+AGG - chr3.3:69435213-69435232 None:intergenic 45.0%
AGAACCTCAGTGACAGCTTC+AGG - chr3.3:69435477-69435496 None:intergenic 50.0%
AGCTGGTACCGCTGTCAAAA+GGG - chr3.3:69432346-69432365 None:intergenic 50.0%
AGGTAGCAAGGACGTGTACT+TGG + chr3.3:69432090-69432109 MS.gene25695:CDS 50.0%
AGTCATAACAGCTGCTGTGG+TGG - chr3.3:69432056-69432075 None:intergenic 50.0%
ATGGTTGGAGCTCCTTTCCA+AGG - chr3.3:69430763-69430782 None:intergenic 50.0%
ATGTAGCAACAAGGCAGAGG+TGG - chr3.3:69434505-69434524 None:intergenic 50.0%
ATGTCGACAGGGCTCCTATT+GGG + chr3.3:69434401-69434420 MS.gene25695:intron 50.0%
ATTGGGCGATTCCATCCTGA+TGG + chr3.3:69435099-69435118 MS.gene25695:CDS 50.0%
CAAACCTGAAGCTGTCACTG+AGG + chr3.3:69435470-69435489 MS.gene25695:CDS 50.0%
CACAGCAGCTGTTATGACTG+TGG + chr3.3:69432057-69432076 MS.gene25695:CDS 50.0%
CACAGTCATAACAGCTGCTG+TGG - chr3.3:69432059-69432078 None:intergenic 50.0%
CACCATGTGAGCTAATCACC+GGG - chr3.3:69436234-69436253 None:intergenic 50.0%
CCCTCAACCCAACACACTAA+AGG - chr3.3:69433683-69433702 None:intergenic 50.0%
CGCCACAAAGCATAAATCGG+AGG - chr3.3:69432820-69432839 None:intergenic 50.0%
CTGCAGCAAGCATAACAGAC+TGG - chr3.3:69432227-69432246 None:intergenic 50.0%
CTTGAGCCGCAATGACCTAA+TGG + chr3.3:69435833-69435852 MS.gene25695:intron 50.0%
GAAAAGTGGGCCCAAGAAAC+TGG + chr3.3:69435414-69435433 MS.gene25695:CDS 50.0%
GAGCGCTTCAAATTTGAGGG+TGG - chr3.3:69435940-69435959 None:intergenic 50.0%
GATCCATGGACACCTGAATC+TGG + chr3.3:69436493-69436512 MS.gene25695:CDS 50.0%
GCATCCGGTCTTCTTAAGCT+AGG + chr3.3:69430961-69430980 MS.gene25695:CDS 50.0%
GCGGCTCAAGTAACATGTCA+AGG - chr3.3:69435823-69435842 None:intergenic 50.0%
GCTCCTATTGGGCAAGGATA+TGG + chr3.3:69434412-69434431 MS.gene25695:CDS 50.0%
GCTGTAAAAGGAAGCTGGCT+AGG + chr3.3:69432722-69432741 MS.gene25695:CDS 50.0%
GGAAGCCCCAGCAAATGTTT+CGG - chr3.3:69434443-69434462 None:intergenic 50.0%
GGCAATGAAGGCAGACTAAG+TGG - chr3.3:69433649-69433668 None:intergenic 50.0%
GGCCTCACGTGTGAAATTAC+AGG - chr3.3:69433222-69433241 None:intergenic 50.0%
GGTGCCTCGAAATCATCGAT+AGG + chr3.3:69435121-69435140 MS.gene25695:CDS 50.0%
GGTTCTGCAGTCCATTTCCA+AGG + chr3.3:69435491-69435510 MS.gene25695:CDS 50.0%
GGTTGCCTCCAAGTACAGTA+CGG - chr3.3:69432799-69432818 None:intergenic 50.0%
GTAATTTCACACGTGAGGCC+AGG + chr3.3:69433222-69433241 MS.gene25695:intron 50.0%
TAAAGTACGTGGTGTTCCGG+TGG + chr3.3:69430675-69430694 MS.gene25695:CDS 50.0%
TACAAGTGGCAGTACAGGTC+TGG + chr3.3:69431610-69431629 MS.gene25695:CDS 50.0%
TAGCTGGTACCGCTGTCAAA+AGG - chr3.3:69432347-69432366 None:intergenic 50.0%
TATGTCGACAGGGCTCCTAT+TGG + chr3.3:69434400-69434419 MS.gene25695:intron 50.0%
TCAACCCACAAAGCTCTTGC+AGG - chr3.3:69433422-69433441 None:intergenic 50.0%
TCAGACAAACCAATGCCACG+AGG + chr3.3:69434843-69434862 MS.gene25695:CDS 50.0%
TGGCTGCTGTAAAAGGAAGC+TGG + chr3.3:69432717-69432736 MS.gene25695:CDS 50.0%
TTAGTCTGCCTTCATTGCCC+TGG + chr3.3:69433650-69433669 MS.gene25695:intron 50.0%
TTGGAAAGGAGCTCCAACCA+TGG + chr3.3:69430762-69430781 MS.gene25695:CDS 50.0%
TTGGGCGATTCCATCCTGAT+GGG + chr3.3:69435100-69435119 MS.gene25695:CDS 50.0%
TTTCTGATACTCGGGCTGAG+TGG + chr3.3:69431013-69431032 MS.gene25695:CDS 50.0%
! ATCAAAATGTACCGGCGCTC+TGG + chr3.3:69433180-69433199 MS.gene25695:intron 50.0%
! ATCCCGGTGATTAGCTCACA+TGG + chr3.3:69436229-69436248 MS.gene25695:intron 50.0%
! ATGATTTCGAGGCACCCATC+AGG - chr3.3:69435117-69435136 None:intergenic 50.0%
! CACGTCAGTCTCTGGAAAAG+TGG + chr3.3:69435400-69435419 MS.gene25695:CDS 50.0%
! CAGTCTGTTATGCTTGCTGC+AGG + chr3.3:69432225-69432244 MS.gene25695:intron 50.0%
! CGCGTGTCCAATTTTGCATC+CGG + chr3.3:69430946-69430965 MS.gene25695:CDS 50.0%
! CTCTCCTGCAAGAGCTTTGT+GGG + chr3.3:69433415-69433434 MS.gene25695:intron 50.0%
! CTTGCTGCAGGTGTTGCAAT+TGG + chr3.3:69432237-69432256 MS.gene25695:CDS 50.0%
! GAAGGTAAGCTTGGTTCGAC+GGG - chr3.3:69431563-69431582 None:intergenic 50.0%
! GAAGTTATTGGAGGGGTGTG+GGG + chr3.3:69433316-69433335 MS.gene25695:intron 50.0%
! GAGCTTTGTGGGTTGAAGTG+TGG + chr3.3:69433426-69433445 MS.gene25695:intron 50.0%
! GGAAGGTAAGCTTGGTTCGA+CGG - chr3.3:69431564-69431583 None:intergenic 50.0%
! GTCGAGAACCGACTTTGTCT+TGG + chr3.3:69431816-69431835 MS.gene25695:intron 50.0%
! TCAAAATGTACCGGCGCTCT+GGG + chr3.3:69433181-69433200 MS.gene25695:intron 50.0%
! TGTTGCTTCACGTCAGTCTC+TGG + chr3.3:69435392-69435411 MS.gene25695:CDS 50.0%
! TTAAGCTGTTGGCGGATCCA+TGG + chr3.3:69436479-69436498 MS.gene25695:CDS 50.0%
! TTGATGAGAAAGGTGTGCGC+TGG + chr3.3:69435061-69435080 MS.gene25695:CDS 50.0%
! TTTTAGTCGCACACCGCCTA+GGG + chr3.3:69433707-69433726 MS.gene25695:intron 50.0%
!! CACACTAAAGGTGTTGTGCC+AGG - chr3.3:69433671-69433690 None:intergenic 50.0%
!! TAGTGTGTTGGGTTGAGGGA+TGG + chr3.3:69433684-69433703 MS.gene25695:intron 50.0%
!! TGCACATGATTCGAGTTGGG+TGG + chr3.3:69435979-69435998 MS.gene25695:intron 50.0%
!!! GGTGTGCGCTGGTTTTATAC+TGG + chr3.3:69435072-69435091 MS.gene25695:CDS 50.0%
AAGGAAGCTGGCTAGGAGCT+TGG + chr3.3:69432729-69432748 MS.gene25695:CDS 55.0%
ACAACCTCTCCTCGTGGCAT+TGG - chr3.3:69434855-69434874 None:intergenic 55.0%
AGCTTGGGGAGTGGAGAAGT+TGG + chr3.3:69432745-69432764 MS.gene25695:CDS 55.0%
AGGAAGCTGGCTAGGAGCTT+GGG + chr3.3:69432730-69432749 MS.gene25695:CDS 55.0%
AGGCGGATGACTACAGTGTG+GGG + chr3.3:69434470-69434489 MS.gene25695:CDS 55.0%
CAAACCAATGCCACGAGGAG+AGG + chr3.3:69434848-69434867 MS.gene25695:CDS 55.0%
CCAACTACAACCTCTCCTCG+TGG - chr3.3:69434861-69434880 None:intergenic 55.0%
CCACAAAGCTCTTGCAGGAG+AGG - chr3.3:69433417-69433436 None:intergenic 55.0%
CCACGAGGAGAGGTTGTAGT+TGG + chr3.3:69434858-69434877 MS.gene25695:CDS 55.0%
CCTCTCCTGCAAGAGCTTTG+TGG + chr3.3:69433414-69433433 MS.gene25695:intron 55.0%
CGAGGAGAGGTTGTAGTTGG+CGG + chr3.3:69434861-69434880 MS.gene25695:CDS 55.0%
GAGGCGGATGACTACAGTGT+GGG + chr3.3:69434469-69434488 MS.gene25695:CDS 55.0%
GCGAGCAAAGACCTCTCCAT+AGG - chr3.3:69430929-69430948 None:intergenic 55.0%
GGTACCGCTGTCAAAAGGGT+AGG - chr3.3:69432342-69432361 None:intergenic 55.0%
GGTGTTCCGGTGGAAGTTAG+TGG + chr3.3:69430685-69430704 MS.gene25695:CDS 55.0%
GTAGTCATCCGCCTCAGAGA+AGG - chr3.3:69434464-69434483 None:intergenic 55.0%
GTCGGCGCTTGTATGCAATC+TGG - chr3.3:69432697-69432716 None:intergenic 55.0%
GTGTTGTGCCAGGGCAATGA+AGG - chr3.3:69433661-69433680 None:intergenic 55.0%
TGAGGCGGATGACTACAGTG+TGG + chr3.3:69434468-69434487 MS.gene25695:CDS 55.0%
TGAGTGGTTCATTGCCCTCC+AGG + chr3.3:69431029-69431048 MS.gene25695:CDS 55.0%
TGGCAGTACAGGTCTGGCAA+AGG + chr3.3:69431616-69431635 MS.gene25695:CDS 55.0%
! TGTGGCGGAGCTCCTTTATC+CGG + chr3.3:69432833-69432852 MS.gene25695:CDS 55.0%
! TTTCGAGGCACCCATCAGGA+TGG - chr3.3:69435113-69435132 None:intergenic 55.0%
!! GATTGCATACAAGCGCCGAC+TGG + chr3.3:69432697-69432716 MS.gene25695:CDS 55.0%
!! GGGAGTGGAGAAGTTGGTGT+GGG + chr3.3:69432751-69432770 MS.gene25695:CDS 55.0%
!! GTTTTAGTCGCACACCGCCT+AGG + chr3.3:69433706-69433725 MS.gene25695:intron 55.0%
GACAGGGCTCCTATTGGGCA+AGG + chr3.3:69434406-69434425 MS.gene25695:intron 60.0%
GACTACAGTGTGGGGCGTGT+TGG + chr3.3:69434478-69434497 MS.gene25695:CDS 60.0%
GGAAGCTGGCTAGGAGCTTG+GGG + chr3.3:69432731-69432750 MS.gene25695:CDS 60.0%
GGCGGTTTCAGTGTGACAGC+TGG + chr3.3:69434879-69434898 MS.gene25695:CDS 60.0%
TGCTGGGGCTTCCTTCTCTG+AGG + chr3.3:69434450-69434469 MS.gene25695:CDS 60.0%
! CGCCGACTGGCTGCTGTAAA+AGG + chr3.3:69432710-69432729 MS.gene25695:CDS 60.0%
! TGGGGCTTCCTTCTCTGAGG+CGG + chr3.3:69434453-69434472 MS.gene25695:CDS 60.0%
!! GGGGAGTGGAGAAGTTGGTG+TGG + chr3.3:69432750-69432769 MS.gene25695:CDS 60.0%
CTGGCTAGGAGCTTGGGGAG+TGG + chr3.3:69432736-69432755 MS.gene25695:CDS 65.0%
GCTCAAAGGACCCAGAGCGC+CGG - chr3.3:69433194-69433213 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 69430514 69436597 69430514 ID=MS.gene25695
chr3.3 mRNA 69430514 69436597 69430514 ID=MS.gene25695.t1;Parent=MS.gene25695
chr3.3 exon 69430514 69431050 69430514 ID=MS.gene25695.t1.exon1;Parent=MS.gene25695.t1
chr3.3 CDS 69430514 69431050 69430514 ID=cds.MS.gene25695.t1;Parent=MS.gene25695.t1
chr3.3 exon 69431161 69431241 69431161 ID=MS.gene25695.t1.exon2;Parent=MS.gene25695.t1
chr3.3 CDS 69431161 69431241 69431161 ID=cds.MS.gene25695.t1;Parent=MS.gene25695.t1
chr3.3 exon 69431365 69431637 69431365 ID=MS.gene25695.t1.exon3;Parent=MS.gene25695.t1
chr3.3 CDS 69431365 69431637 69431365 ID=cds.MS.gene25695.t1;Parent=MS.gene25695.t1
chr3.3 exon 69432022 69432153 69432022 ID=MS.gene25695.t1.exon4;Parent=MS.gene25695.t1
chr3.3 CDS 69432022 69432153 69432022 ID=cds.MS.gene25695.t1;Parent=MS.gene25695.t1
chr3.3 exon 69432228 69432401 69432228 ID=MS.gene25695.t1.exon5;Parent=MS.gene25695.t1
chr3.3 CDS 69432228 69432401 69432228 ID=cds.MS.gene25695.t1;Parent=MS.gene25695.t1
chr3.3 exon 69432659 69432888 69432659 ID=MS.gene25695.t1.exon6;Parent=MS.gene25695.t1
chr3.3 CDS 69432659 69432888 69432659 ID=cds.MS.gene25695.t1;Parent=MS.gene25695.t1
chr3.3 exon 69434411 69434528 69434411 ID=MS.gene25695.t1.exon7;Parent=MS.gene25695.t1
chr3.3 CDS 69434411 69434528 69434411 ID=cds.MS.gene25695.t1;Parent=MS.gene25695.t1
chr3.3 exon 69434810 69434941 69434810 ID=MS.gene25695.t1.exon8;Parent=MS.gene25695.t1
chr3.3 CDS 69434810 69434941 69434810 ID=cds.MS.gene25695.t1;Parent=MS.gene25695.t1
chr3.3 exon 69435060 69435194 69435060 ID=MS.gene25695.t1.exon9;Parent=MS.gene25695.t1
chr3.3 CDS 69435060 69435194 69435060 ID=cds.MS.gene25695.t1;Parent=MS.gene25695.t1
chr3.3 exon 69435306 69435512 69435306 ID=MS.gene25695.t1.exon10;Parent=MS.gene25695.t1
chr3.3 CDS 69435306 69435512 69435306 ID=cds.MS.gene25695.t1;Parent=MS.gene25695.t1
chr3.3 exon 69436433 69436597 69436433 ID=MS.gene25695.t1.exon11;Parent=MS.gene25695.t1
chr3.3 CDS 69436433 69436597 69436433 ID=cds.MS.gene25695.t1;Parent=MS.gene25695.t1
Gene Sequence

>MS.gene25695

ATGGTTGATCCAAACGGTAGTTCCTCATGGTTGAAAAGTTTGAATATCTGTGAAACATTTGGGTTGAAAGATCATGGAGAACTTGGATTTGTGTTTGCTATAGTCATAGGCATCATTGTTCCTGTCTTGTTTTCGGTTTTTTTCTTAGGAAAGAAGAAAGGTAAAGTACGTGGTGTTCCGGTGGAAGTTAGTGGTGAATCGGGTTATGCTGTTCGTAATGCTCGATATTCTGAGTTGGTTGAAGTTCCTTGGAAAGGAGCTCCAACCATGGCTCATTTATTTGAGCAATCATGTAAAAAGCATACACATAATAGATTTCTTGGAACAAGGAAACTAATAGGGAAGGAGTTTGTTACATCTAGTGATGGCAGGAAATTTGAGAAAGTCCACTTAGGAGAATATGAATGGGAAACCTATGGAGAGGTCTTTGCTCGCGTGTCCAATTTTGCATCCGGTCTTCTTAAGCTAGGCCATGATATAGATAGTCATGTTGCGATTTTTTCTGATACTCGGGCTGAGTGGTTCATTGCCCTCCAGGTAAATTTGATTTACCAGCTTCATTTCGTTGACTCATTCCATTAACTTGAGGCTTATATCGATTCTGCATTCACAAATTTTAATGAAATACTTGCTATGCTATACTTCAGGGTTGCTTCCGGCAGAATATAACGGTCGTCACTATTTATGCTTCTCTAGGTGAGGATGCTCTGATTCACTCACTGAACGAGGTAAGAAGTTCTTTTCTTTTGTTTAGTTTTGTAGACAGTAGAACTAGATGAAACATAGTTCATCACTGTAGTAACTAAAAATAGTGTGGCATGTTCTCACTTGAAGCTTTGTAATATGAACAGACCCAAGTATCTACTCTGATCTGTGACGTAAAGCTGCTGAATAAACTGGACGCAATAAGATCAAAACTAACATCTTTGCAAAATATAATTTACTTTGAAGACGATAGCAAAGAGGAACATGCTTTTTCAGAAGGTTTGAGCAGCAACTGTACAATTGCATCTTTTGATGAAGTTGAGAAACTTGGGAAAGAAAGTCCCGTCGAACCAAGCTTACCTTCCAAGAATGCTGTTGCAGTTGTCATGTATACAAGTGGCAGTACAGGTCTGGCAAAGGTTTGTTTCTTCTTCAAGTTTTGTTAAAGGCGTTCGTCTCTGTGTCTATGCATGCATAATCTTTTGTTCATATTTGTGATTTGCTGGATGTTTTTTAAATGTTTTGTCCAATGTCATGGTTATTAGTTTTCTCAACAACCTGATGCTTACTATAGAACGTAATTCAGAAATACGAGTAGTCGAGAACCGACTTTGTCTTGGTATAACTTTATTCTATATAGATTTTTAGGTGGTAAAGTATGCACAAGAACCATATTAAGTCATTATGTGCATATGATTGGCTTTTTCTTGCCTATTGACATTGATAGCTATGAGGATCTCCATCAAGTCAATTACATGTTACCCTTTGATTTGATAAGTTGTTAACCTTTTGTTATCGTTTAGGGTGTCATGATTACTCACGGGAACATTGTAGCCACCACAGCAGCTGTTATGACTGTGGTTCCAAATCTAGGTAGCAAGGACGTGTACTTGGCGTACTTGCCCCTTGCTCATGTTTTTGAAATGGCAGCAGAGGTGATTCTTTTAGCCTTTAAGTCTTAATTGTCAAATTAGTTGGATGCTGTCTCTAAATTACTCTGGTTGTCCAGTCTGTTATGCTTGCTGCAGGTGTTGCAATTGGTTACGGCAGTCCTATGACTTTGACCGATACATCTAATAAAGTCAAGAAAGGAACCAAGGGAGATGTTACTGTTTTAAAACCTACCCTTTTGACAGCGGTACCAGCTATTATTGATCGTATTCGAGATGGAGTTGTAAAAAAGGTGTGTCTACTAATCCACATCAACATTTTCATCTGCGCTACATTTAGTTTTTACTTTTTATGTGATATTCACTGTTCAAATTTTACTATCATAATGCATTGATGGTCTTGTTAGATATCTGGATAGGATTTTCCAATTTGATAGCCACTTTTCAATCACGAATTGCTGTGACTTGCATTTATTTTTCCTTTTTCACTTTCCCCTAATGTCTTAAACTAATCATTGGAAAATTATTCTCTTACCTATATTGTACTTAGGTGGAGGAAAAAGGAGGACTTGCCAAGAATCTTTTCCAGATTGCATACAAGCGCCGACTGGCTGCTGTAAAAGGAAGCTGGCTAGGAGCTTGGGGAGTGGAGAAGTTGGTGTGGGATACCATTATCTTTAAAAAAATCCGTACTGTACTTGGAGGCAACCTCCGATTTATGCTTTGTGGCGGAGCTCCTTTATCCGGAGATTCACAACAATTCATCAATATCTGTGTGGGGTAATGATTCTCATTTTATACCATGCATTATTTGGTTGGAACTAAACTAGTTGTATTATATGTATATGTGCGTATGCATATGTAGTTGGAGAAAATGAGACCTCTTGAGTTGCTTATACTTTTTTTCTTCGGTTTTTGTTCTGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTCTGATATATTTGTACAGAACTACCACTATTATTAATATCATGGTGATATTAGTGGCAAAATTTCAGTAATAATCCAGCGTTATTCATCAATTTCTGGTTCAATTCTATCAAAATGTACCGGCGCTCTGGGTCCTTTGAGCTATGACCTGTAATTTCACACGTGAGGCCAGGTTTGAGTACCTCAAAATAGAGTCAAACAGACTATCAACAGTATTTCGGGATATATCTTCAAAAATATCCTTGAAGTTATTGGAGGGGTGTGGGGCGAAATTGAGTGTCATTCACCAACCATTTCAAAAGCCTATGTTGTGCTACATGAATGGTTTTATATATAACAAGTCCTCTCCTGCAAGAGCTTTGTGGGTTGAAGTGTGGACAACGCAAATATCCACCTCATCTCGTATTGAAATTTAATGTATATTTAATTCTAGACGACATGGTATTAGGGGTTTTGGTACCATGTTATGAGCCAATTCACAAGCTGAACTTGTTCAGTGACTGGTGAGTAACATGATTAGTTTTTGTTGAAAAATTTGCCTAAATTGTGGCAACCACCACAATCAGTTATTTAACCACTTAGTCTGCCTTCATTGCCCTGGCACAACACCTTTAGTGTGTTGGGTTGAGGGATGGTTTTAGTCGCACACCGCCTAGGGATATGACTCTAAAAGATTTCCAAAATAATGGAATCAAAGAAAGCACTCTAAAATGTATGTCTCTTCATGGATTTGAAATTCAAATTAGTAAGGTGTCTTCTTTCATGATTGAATGGGTATATTCATGAATTAATACGGCTTTCATTTGAGTCAATTCATGAAAGAATTGAGCTATCTGTTAAAAGTTATTTCTCTTAACCATGTGGTATGTGGTTCTCTATACATTGAACAACAAAATTCATTTGTTTCTTATCCAAAATTCTGCCAAAATCAAAATTCTAAACCATCCTCTCTTTTCTCTTTTCTCTTTTCTCATAGTTCCTATTCCACTAGATAGGATAAAGGAAAATATATTCCTTAAACAACTTTCAAGACTCATGAGGGGTTCTGTATGTTACTTGTGATGCCTTGTGAACTATCCATTGCATCCTTCTCTTTCTAGTCTCTCATGAATGAGACGCTCAAACCATTTCTATGGAAATTTACGTTAGTGTTTTTTTGATGACATACCGATTTTCATAAAAAATCAACAATACTCACTTTGTCCATTTGAGATTCATTCTTTAACTATTACTGGTTCAAGTTATATTGAAGTTGAAAAAAAGAACTCTATTATTTCTAAACTACACCTCTTTTTGTCCGACTAGAGTTATAATTCTTTGTATTTATTTATGTCGACAGGGCTCCTATTGGGCAAGGATATGGTTTGACCGAAACATTTGCTGGGGCTTCCTTCTCTGAGGCGGATGACTACAGTGTGGGGCGTGTTGGTCCACCTCTGCCTTGTTGCTACATTAAGGTATGCTATATATCGTATTAACTAAAAATCAGTGCATTGAACTTCCAACTTATACTTATTTATAGATGTTGCATTGAATTATTGTAATAGTCATTAATTATTATAGTTTTCATGCTGGTGAGTAGTAAAACTTATTGGACTTTAAAGATCAGTGAGAAGTTAGTAACATCTCAGAAATATTATCTCTTAAGCTGTTATAGAACTTGCAGTTGGTGCTATTTATGAGCCTCAAATAGGGGGGAATTTGATTTTGTTATTAATTTGGTTCGTTGGTTGTATAGCTTGTTTCTTGGGAGGAAGGAGGGTATCTATCATCAGACAAACCAATGCCACGAGGAGAGGTTGTAGTTGGCGGTTTCAGTGTGACAGCTGGTTATTTTAAGAATCAAGATAAAACTGATGAAGTGTTCAAGGTAATTTTCACACTTAAAGTTATGTGCATGTCATTTTTCCCTTTTAATTTTCTTTAGTTGCATGTAAATTTGCTTTTGCTGATTAATAAGTAGCACGTGATTTTTCAACTTGGTACAGGTTGATGAGAAAGGTGTGCGCTGGTTTTATACTGGTGACATTGGGCGATTCCATCCTGATGGGTGCCTCGAAATCATCGATAGGAAGAAGGATATTGTCAAACTTCAACATGGAGAATATATCTCTCTTGGAAAGGTGACTCAAACTATACCTTGTCGTTCTAGAATCACGACGCAGTACTGACACGAGATTCACAGTAAAATTTTCAGGGTCTAATATTAGTCTTTCATTTTAATGTAATGGCAGGTTGAGGCAGCACTCGCGTCATGTGATTATGTGGATAGTATAATGGTGCATGCAGAACCCTTTCACAGTTACTGTGTTGCTCTAGCTGTTGCTTCACGTCAGTCTCTGGAAAAGTGGGCCCAAGAAACTGGTATCGATTACAAAGATTTTCCTGATCTCTGTAACAAACCTGAAGCTGTCACTGAGGTTCTGCAGTCCATTTCCAAGGTTAGCTAATATGTGGATAGTTACTTGTTTGCTGGCTATCCAGGATTAAATCGATAGATTATTCATTAATAATTTATCAATTTGAAGATGAAGTAACACTTGTCGCGTACTACCACACTTAAATTAAGACGCCGAAAATGTTTAATTTCTCTTCATTTATTAGACTGCTTGAATATTTAAGGTGACAAATAAGAACACTGAAAATAAACTATGTAAAGTTTGTTTAAGACTATGTTGGATTCAACAAAACATAAAGGCACCATTACACAACCTCCATCCAACATCTTAAACTTTTAGTAGAATTGGTCCTTGACATGTTACTTGAGCCGCAATGACCTAATGGTCAAGAGAGTGATCATTACCGCATCCATACTTCTGAATCAGGTTTATTTTTAGTTTAAGGAAGACTGGACCCATATTCTATCCACCCTCAAATTTGAAGCGCTCTTGCATTATAGGGATGTTGTGCACATGATTCGAGTTGGGTGGATGAAATAGAGGAATTCTTTAGATATAACATATTATTGCAGAGTACATATCAAACTCAGACAGATTCTACTATAATACCAGCCAAAATCTTTGATATTGTGTCTAGCAAAGTGTCAACAAGAACAAAAAATATATGTTGTGGATAAGAATGCTGATGTGGATTAATGAACAGTCATAAAAGAATATATGAGATTAGATGTGAGTGTAGAAAAAAATGACAGAAACTCATCCCGGTGATTAGCTCACATGGTGAGAAGACCAATAGAGACTACTAAAAAAGGTGGATCAAATGCAAGATGTTCATGTTTAAAGGGATGGGAAAAAAAACCCGTAAATTGAGCTTTATCTATTATGTTTTAACAAGGTAAACTACATTGCAAGTTTAATAACCCTTATATGGTAGATGGCTTATTTTACTTTGTTAATTTCAGGCTGCAAAAGCTGCAAAGCTGCAAAAAACTGAAGTTCCTGCAAAGATTAAGCTGTTGGCGGATCCATGGACACCTGAATCTGGATTAGTTACTGCTGCTCTCAAGTTAAAGAGAGAACAGCTGAAAGCCAAATTCAATGATGATCTTCAGAAGTTGTATGCATGA
Protein sequence

>MS.gene25695.t1

MVDPNGSSSWLKSLNICETFGLKDHGELGFVFAIVIGIIVPVLFSVFFLGKKKGKVRGVPVEVSGESGYAVRNARYSELVEVPWKGAPTMAHLFEQSCKKHTHNRFLGTRKLIGKEFVTSSDGRKFEKVHLGEYEWETYGEVFARVSNFASGLLKLGHDIDSHVAIFSDTRAEWFIALQGCFRQNITVVTIYASLGEDALIHSLNETQVSTLICDVKLLNKLDAIRSKLTSLQNIIYFEDDSKEEHAFSEGLSSNCTIASFDEVEKLGKESPVEPSLPSKNAVAVVMYTSGSTGLAKGVMITHGNIVATTAAVMTVVPNLGSKDVYLAYLPLAHVFEMAAESVMLAAGVAIGYGSPMTLTDTSNKVKKGTKGDVTVLKPTLLTAVPAIIDRIRDGVVKKVEEKGGLAKNLFQIAYKRRLAAVKGSWLGAWGVEKLVWDTIIFKKIRTVLGGNLRFMLCGGAPLSGDSQQFINICVGAPIGQGYGLTETFAGASFSEADDYSVGRVGPPLPCCYIKLVSWEEGGYLSSDKPMPRGEVVVGGFSVTAGYFKNQDKTDEVFKVDEKGVRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYISLGKVEAALASCDYVDSIMVHAEPFHSYCVALAVASRQSLEKWAQETGIDYKDFPDLCNKPEAVTEVLQSISKAAKAAKLQKTEVPAKIKLLADPWTPESGLVTAALKLKREQLKAKFNDDLQKLYA