Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80076.t1 | RHN82051.1 | 99.1 | 697 | 6 | 0 | 1 | 697 | 1 | 697 | 0.00E+00 | 1419.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80076.t1 | Q8LPS1 | 79.1 | 683 | 141 | 1 | 11 | 693 | 16 | 696 | 0.0e+00 | 1145.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80076.t1 | A0A396JZE4 | 99.1 | 697 | 6 | 0 | 1 | 697 | 1 | 697 | 0.0e+00 | 1419.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene75435 | MS.gene80076 | PPI |
MS.gene28831 | MS.gene80076 | PPI |
MS.gene22309 | MS.gene80076 | PPI |
MS.gene072726 | MS.gene80076 | PPI |
MS.gene061071 | MS.gene80076 | PPI |
MS.gene70469 | MS.gene80076 | PPI |
MS.gene22308 | MS.gene80076 | PPI |
MS.gene80076 | MS.gene25695 | PPI |
MS.gene072680 | MS.gene80076 | PPI |
MS.gene33594 | MS.gene80076 | PPI |
MS.gene06068 | MS.gene80076 | PPI |
MS.gene050419 | MS.gene80076 | PPI |
MS.gene044334 | MS.gene80076 | PPI |
MS.gene061688 | MS.gene80076 | PPI |
MS.gene07080 | MS.gene80076 | PPI |
MS.gene07328 | MS.gene80076 | PPI |
MS.gene90444 | MS.gene80076 | PPI |
MS.gene20877 | MS.gene80076 | PPI |
MS.gene026390 | MS.gene80076 | PPI |
MS.gene80076 | MS.gene40645 | PPI |
MS.gene21662 | MS.gene80076 | PPI |
MS.gene003833 | MS.gene80076 | PPI |
MS.gene80076 | MS.gene005494 | PPI |
MS.gene55795 | MS.gene80076 | PPI |
MS.gene045073 | MS.gene80076 | PPI |
MS.gene21663 | MS.gene80076 | PPI |
MS.gene71307 | MS.gene80076 | PPI |
MS.gene026629 | MS.gene80076 | PPI |
MS.gene056629 | MS.gene80076 | PPI |
MS.gene80076 | MS.gene63009 | PPI |
MS.gene040821 | MS.gene80076 | PPI |
MS.gene048924 | MS.gene80076 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80076.t1 | MTR_1g104810 | 98.996 | 697 | 7 | 0 | 1 | 697 | 1 | 697 | 0.0 | 1437 |
MS.gene80076.t1 | MTR_1g104810 | 98.539 | 616 | 8 | 1 | 83 | 697 | 15 | 630 | 0.0 | 1256 |
MS.gene80076.t1 | MTR_4g068670 | 42.673 | 621 | 334 | 9 | 83 | 686 | 38 | 653 | 1.15e-167 | 496 |
MS.gene80076.t1 | MTR_5g009350 | 40.895 | 626 | 355 | 8 | 75 | 689 | 38 | 659 | 1.04e-158 | 473 |
MS.gene80076.t1 | MTR_5g009350 | 40.946 | 613 | 347 | 8 | 75 | 676 | 38 | 646 | 5.77e-156 | 466 |
MS.gene80076.t1 | MTR_1g034360 | 40.282 | 638 | 362 | 11 | 60 | 686 | 26 | 655 | 6.87e-156 | 466 |
MS.gene80076.t1 | MTR_8g099420 | 40.813 | 615 | 349 | 8 | 82 | 685 | 46 | 656 | 1.65e-155 | 465 |
MS.gene80076.t1 | MTR_5g009360 | 40.909 | 616 | 349 | 8 | 85 | 689 | 48 | 659 | 5.22e-154 | 461 |
MS.gene80076.t1 | MTR_7g109830 | 38.880 | 643 | 378 | 8 | 54 | 685 | 15 | 653 | 2.03e-140 | 426 |
MS.gene80076.t1 | MTR_1g086600 | 37.963 | 648 | 378 | 12 | 60 | 692 | 46 | 684 | 5.08e-134 | 410 |
MS.gene80076.t1 | MTR_5g009360 | 41.011 | 534 | 300 | 8 | 167 | 689 | 4 | 533 | 1.15e-132 | 402 |
MS.gene80076.t1 | MTR_5g009350 | 39.326 | 534 | 310 | 7 | 75 | 597 | 38 | 568 | 3.95e-125 | 384 |
MS.gene80076.t1 | MTR_5g009350 | 40.873 | 504 | 284 | 7 | 75 | 567 | 38 | 538 | 9.69e-124 | 380 |
MS.gene80076.t1 | MTR_3g087980 | 34.830 | 646 | 377 | 11 | 79 | 686 | 55 | 694 | 4.24e-121 | 377 |
MS.gene80076.t1 | MTR_1g030290 | 33.642 | 648 | 379 | 11 | 80 | 685 | 57 | 695 | 5.61e-117 | 367 |
MS.gene80076.t1 | MTR_3g082660 | 34.992 | 603 | 359 | 11 | 110 | 685 | 131 | 727 | 1.59e-111 | 353 |
MS.gene80076.t1 | MTR_3g084450 | 26.772 | 635 | 377 | 18 | 116 | 684 | 107 | 719 | 3.25e-54 | 198 |
MS.gene80076.t1 | MTR_3g084470 | 26.856 | 633 | 376 | 18 | 116 | 684 | 105 | 714 | 2.03e-52 | 193 |
MS.gene80076.t1 | MTR_3g084450 | 28.866 | 485 | 273 | 14 | 252 | 684 | 47 | 511 | 9.47e-51 | 185 |
MS.gene80076.t1 | MTR_8g083170 | 26.073 | 629 | 391 | 17 | 116 | 684 | 109 | 723 | 1.08e-48 | 182 |
MS.gene80076.t1 | MTR_2g095510 | 29.245 | 424 | 219 | 16 | 174 | 568 | 85 | 456 | 3.75e-30 | 125 |
MS.gene80076.t1 | MTR_4g013210 | 29.412 | 340 | 180 | 7 | 258 | 580 | 69 | 365 | 2.51e-29 | 122 |
MS.gene80076.t1 | MTR_2g095510 | 29.238 | 407 | 208 | 15 | 174 | 551 | 85 | 440 | 7.16e-29 | 120 |
MS.gene80076.t1 | MTR_4g013210 | 29.412 | 340 | 180 | 7 | 258 | 580 | 221 | 517 | 7.71e-29 | 122 |
MS.gene80076.t1 | MTR_4g057730 | 29.141 | 326 | 166 | 12 | 256 | 568 | 186 | 459 | 8.14e-29 | 120 |
MS.gene80076.t1 | MTR_4g011790 | 27.536 | 345 | 189 | 6 | 258 | 580 | 226 | 531 | 1.47e-28 | 121 |
MS.gene80076.t1 | MTR_4g057730 | 29.358 | 327 | 164 | 12 | 256 | 568 | 186 | 459 | 1.49e-28 | 120 |
MS.gene80076.t1 | MTR_1g063110 | 26.793 | 474 | 262 | 20 | 116 | 568 | 56 | 465 | 2.53e-28 | 120 |
MS.gene80076.t1 | MTR_4g011790 | 26.822 | 343 | 185 | 6 | 258 | 580 | 226 | 522 | 7.61e-27 | 116 |
MS.gene80076.t1 | MTR_4g057730 | 29.355 | 310 | 153 | 11 | 256 | 551 | 186 | 443 | 8.27e-27 | 114 |
MS.gene80076.t1 | MTR_4g011790 | 27.114 | 343 | 184 | 6 | 258 | 580 | 226 | 522 | 1.25e-26 | 115 |
MS.gene80076.t1 | MTR_1g063120 | 27.778 | 342 | 190 | 12 | 238 | 568 | 174 | 469 | 3.45e-26 | 114 |
MS.gene80076.t1 | MTR_2g105570 | 25.558 | 493 | 281 | 19 | 94 | 564 | 33 | 461 | 5.41e-26 | 113 |
MS.gene80076.t1 | MTR_5g007640 | 26.596 | 470 | 270 | 15 | 114 | 568 | 95 | 504 | 6.55e-26 | 113 |
MS.gene80076.t1 | MTR_4g005750 | 30.247 | 324 | 166 | 12 | 256 | 566 | 180 | 456 | 1.10e-24 | 109 |
MS.gene80076.t1 | MTR_4g077900 | 28.125 | 384 | 210 | 12 | 202 | 568 | 61 | 395 | 3.46e-24 | 107 |
MS.gene80076.t1 | MTR_3g088870 | 27.298 | 359 | 199 | 12 | 223 | 566 | 162 | 473 | 6.97e-24 | 107 |
MS.gene80076.t1 | MTR_4g013210 | 28.173 | 323 | 165 | 7 | 258 | 580 | 69 | 324 | 2.27e-23 | 103 |
MS.gene80076.t1 | MTR_5g027480 | 24.769 | 541 | 311 | 17 | 57 | 580 | 23 | 484 | 2.40e-23 | 105 |
MS.gene80076.t1 | MTR_4g013210 | 28.173 | 323 | 165 | 7 | 258 | 580 | 221 | 476 | 4.22e-23 | 104 |
MS.gene80076.t1 | MTR_3g088880 | 27.532 | 316 | 175 | 9 | 259 | 566 | 202 | 471 | 5.07e-23 | 104 |
MS.gene80076.t1 | MTR_4g128337 | 24.580 | 476 | 285 | 16 | 106 | 568 | 51 | 465 | 2.56e-22 | 102 |
MS.gene80076.t1 | MTR_5g027500 | 30.556 | 324 | 168 | 12 | 256 | 568 | 208 | 485 | 5.42e-22 | 100 |
MS.gene80076.t1 | MTR_3g035130 | 25.904 | 332 | 191 | 10 | 256 | 580 | 161 | 444 | 3.43e-21 | 97.8 |
MS.gene80076.t1 | MTR_4g013210 | 28.025 | 314 | 159 | 7 | 258 | 571 | 221 | 467 | 3.52e-21 | 98.2 |
MS.gene80076.t1 | MTR_3g035130 | 25.904 | 332 | 191 | 10 | 256 | 580 | 161 | 444 | 4.33e-21 | 97.8 |
MS.gene80076.t1 | MTR_5g076220 | 24.777 | 448 | 273 | 12 | 136 | 566 | 60 | 460 | 4.94e-20 | 94.7 |
MS.gene80076.t1 | MTR_1g026310 | 27.070 | 314 | 176 | 9 | 259 | 564 | 205 | 473 | 5.83e-20 | 94.7 |
MS.gene80076.t1 | MTR_3g460770 | 33.889 | 180 | 99 | 8 | 396 | 568 | 292 | 458 | 6.03e-19 | 91.3 |
MS.gene80076.t1 | MTR_1569s0010 | 25.564 | 399 | 225 | 18 | 232 | 610 | 157 | 503 | 8.55e-19 | 90.9 |
MS.gene80076.t1 | MTR_5g076200 | 24.330 | 448 | 275 | 12 | 136 | 566 | 60 | 460 | 2.83e-18 | 89.4 |
MS.gene80076.t1 | MTR_0161s0050 | 27.100 | 369 | 213 | 12 | 209 | 566 | 139 | 462 | 1.93e-17 | 86.7 |
MS.gene80076.t1 | MTR_1g073180 | 28.173 | 323 | 174 | 16 | 253 | 566 | 198 | 471 | 1.72e-15 | 80.5 |
MS.gene80076.t1 | MTR_1g073180 | 28.173 | 323 | 174 | 16 | 253 | 566 | 176 | 449 | 2.01e-15 | 80.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80076.t1 | AT3G05970 | 79.063 | 683 | 141 | 1 | 11 | 693 | 16 | 696 | 0.0 | 1098 |
MS.gene80076.t1 | AT5G27600 | 73.237 | 695 | 183 | 1 | 1 | 692 | 1 | 695 | 0.0 | 1092 |
MS.gene80076.t1 | AT1G49430 | 41.167 | 617 | 346 | 7 | 87 | 690 | 51 | 663 | 9.28e-158 | 471 |
MS.gene80076.t1 | AT1G64400 | 40.217 | 644 | 355 | 10 | 60 | 686 | 27 | 657 | 2.43e-156 | 468 |
MS.gene80076.t1 | AT4G23850 | 39.158 | 641 | 370 | 10 | 60 | 688 | 27 | 659 | 3.95e-156 | 467 |
MS.gene80076.t1 | AT4G11030 | 38.725 | 643 | 374 | 10 | 60 | 690 | 27 | 661 | 4.36e-150 | 451 |
MS.gene80076.t1 | AT2G47240 | 39.620 | 631 | 354 | 8 | 75 | 688 | 36 | 656 | 1.82e-144 | 437 |
MS.gene80076.t1 | AT2G47240 | 39.620 | 631 | 354 | 8 | 75 | 688 | 36 | 656 | 1.82e-144 | 437 |
MS.gene80076.t1 | AT2G47240 | 39.620 | 631 | 354 | 8 | 75 | 688 | 36 | 656 | 1.82e-144 | 437 |
MS.gene80076.t1 | AT2G47240 | 39.934 | 606 | 337 | 8 | 100 | 688 | 2 | 597 | 1.04e-140 | 425 |
MS.gene80076.t1 | AT1G77590 | 34.161 | 644 | 377 | 13 | 80 | 685 | 57 | 691 | 1.27e-116 | 365 |
MS.gene80076.t1 | AT2G04350 | 32.653 | 686 | 412 | 13 | 41 | 685 | 44 | 720 | 4.39e-115 | 362 |
MS.gene80076.t1 | AT2G04350 | 32.653 | 686 | 412 | 13 | 41 | 685 | 44 | 720 | 4.39e-115 | 362 |
MS.gene80076.t1 | AT1G77590 | 35.507 | 552 | 323 | 11 | 158 | 685 | 3 | 545 | 3.29e-106 | 334 |
MS.gene80076.t1 | AT1G49430 | 39.912 | 456 | 257 | 7 | 87 | 529 | 51 | 502 | 7.52e-102 | 322 |
MS.gene80076.t1 | AT3G23790 | 27.243 | 613 | 370 | 19 | 131 | 684 | 126 | 721 | 1.01e-48 | 183 |
MS.gene80076.t1 | AT4G14070 | 25.472 | 636 | 373 | 19 | 116 | 685 | 127 | 727 | 6.36e-48 | 181 |
MS.gene80076.t1 | AT4G05160 | 27.119 | 531 | 303 | 21 | 51 | 568 | 2 | 461 | 1.63e-33 | 136 |
MS.gene80076.t1 | AT3G21230 | 27.140 | 479 | 274 | 18 | 106 | 568 | 66 | 485 | 1.64e-30 | 127 |
MS.gene80076.t1 | AT3G21230 | 27.122 | 483 | 277 | 18 | 102 | 568 | 62 | 485 | 1.65e-30 | 126 |
MS.gene80076.t1 | AT3G21230 | 27.140 | 479 | 274 | 18 | 106 | 568 | 66 | 485 | 2.52e-30 | 126 |
MS.gene80076.t1 | AT3G21240 | 24.132 | 576 | 332 | 21 | 72 | 615 | 25 | 527 | 1.69e-27 | 118 |
MS.gene80076.t1 | AT3G21240 | 25.000 | 520 | 294 | 19 | 72 | 568 | 25 | 471 | 2.52e-27 | 116 |
MS.gene80076.t1 | AT3G21240 | 25.000 | 520 | 294 | 19 | 72 | 568 | 25 | 471 | 2.52e-27 | 116 |
MS.gene80076.t1 | AT1G65060 | 25.850 | 588 | 312 | 22 | 18 | 578 | 1 | 491 | 2.57e-26 | 114 |
MS.gene80076.t1 | AT3G16170 | 26.247 | 381 | 226 | 6 | 258 | 624 | 234 | 573 | 7.40e-26 | 113 |
MS.gene80076.t1 | AT4G19010 | 30.909 | 330 | 165 | 11 | 255 | 568 | 197 | 479 | 1.28e-25 | 112 |
MS.gene80076.t1 | AT1G65060 | 25.267 | 562 | 297 | 19 | 18 | 552 | 1 | 466 | 1.48e-24 | 108 |
MS.gene80076.t1 | AT1G51680 | 28.378 | 370 | 198 | 11 | 215 | 568 | 160 | 478 | 6.80e-23 | 103 |
MS.gene80076.t1 | AT1G51680 | 28.378 | 370 | 198 | 11 | 215 | 568 | 160 | 478 | 8.72e-23 | 103 |
MS.gene80076.t1 | AT1G51680 | 28.378 | 370 | 198 | 11 | 215 | 568 | 160 | 478 | 1.34e-22 | 102 |
MS.gene80076.t1 | AT1G20480 | 28.435 | 313 | 171 | 13 | 258 | 564 | 213 | 478 | 5.79e-21 | 97.8 |
MS.gene80076.t1 | AT3G48990 | 23.516 | 455 | 275 | 12 | 136 | 580 | 52 | 443 | 1.15e-20 | 96.7 |
MS.gene80076.t1 | AT1G62940 | 28.173 | 323 | 172 | 12 | 259 | 568 | 182 | 457 | 4.32e-20 | 95.1 |
MS.gene80076.t1 | AT1G20510 | 28.076 | 317 | 178 | 11 | 258 | 568 | 189 | 461 | 1.16e-19 | 93.2 |
MS.gene80076.t1 | AT1G20510 | 28.076 | 317 | 178 | 11 | 258 | 568 | 189 | 461 | 1.67e-19 | 93.2 |
MS.gene80076.t1 | AT5G63380 | 25.974 | 385 | 212 | 14 | 190 | 566 | 154 | 473 | 4.13e-19 | 92.0 |
MS.gene80076.t1 | AT1G20500 | 26.266 | 316 | 183 | 10 | 258 | 568 | 197 | 467 | 7.93e-19 | 90.9 |
MS.gene80076.t1 | AT1G20510 | 28.333 | 300 | 166 | 10 | 258 | 551 | 189 | 445 | 2.79e-18 | 89.0 |
MS.gene80076.t1 | AT5G38120 | 27.564 | 312 | 174 | 11 | 258 | 564 | 199 | 463 | 7.03e-17 | 84.7 |
MS.gene80076.t1 | AT5G38120 | 27.564 | 312 | 174 | 11 | 258 | 564 | 199 | 463 | 7.03e-17 | 84.7 |
MS.gene80076.t1 | AT5G38120 | 27.215 | 316 | 178 | 11 | 258 | 568 | 199 | 467 | 7.17e-17 | 84.7 |
MS.gene80076.t1 | AT5G38120 | 27.215 | 316 | 178 | 11 | 258 | 568 | 199 | 467 | 7.20e-17 | 84.7 |
MS.gene80076.t1 | AT3G21230 | 25.532 | 423 | 241 | 17 | 102 | 508 | 62 | 426 | 1.75e-16 | 83.2 |
MS.gene80076.t1 | AT5G16340 | 23.276 | 464 | 295 | 12 | 117 | 566 | 42 | 458 | 8.33e-15 | 78.2 |
Find 169 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCAACATCCTCAGGCTTT+GGG | 0.168574 | 1.1:+75072639 | None:intergenic |
GGTTCTGGTTTGATTCATTA+TGG | 0.211853 | 1.1:-75075232 | MS.gene80076:CDS |
TTTCCTGTCTGCAGTTTCTC+TGG | 0.218038 | 1.1:+75075835 | None:intergenic |
CTAGGTCATCCATTAGTTTC+AGG | 0.218475 | 1.1:+75071722 | None:intergenic |
CGTATACTACCACTATGTTT+TGG | 0.251948 | 1.1:+75068577 | None:intergenic |
GAAGAAGAATATCTTTAAAT+TGG | 0.266892 | 1.1:-75068861 | MS.gene80076:CDS |
AAGAGCAAAGGCAGCTGTTT+TGG | 0.269619 | 1.1:-75068239 | MS.gene80076:CDS |
TTTGATGCCCTGTAGCTTAG+AGG | 0.270362 | 1.1:-75068109 | MS.gene80076:intron |
GAACCGTTTGCGATGGAAAA+TGG | 0.284061 | 1.1:-75068052 | MS.gene80076:CDS |
GTGGCACAGTGCTTTATATA+TGG | 0.285745 | 1.1:-75068779 | MS.gene80076:intron |
CAAGTCATGACAGTATATTT+TGG | 0.315112 | 1.1:-75072280 | MS.gene80076:CDS |
CCTTTCTAGGGTGCTGGCAT+TGG | 0.318151 | 1.1:-75075105 | MS.gene80076:intron |
TACTCACCACAGGCTGGATT+TGG | 0.322408 | 1.1:+75069991 | None:intergenic |
TGGTTGCATACCGGAGATAT+TGG | 0.326125 | 1.1:-75069298 | MS.gene80076:CDS |
TTTCGGGATTACAAATATTT+GGG | 0.326746 | 1.1:-75075474 | MS.gene80076:CDS |
AACTTCATTGCAAATGTTGC+CGG | 0.329433 | 1.1:-75072480 | MS.gene80076:CDS |
TGCTATACAAGTGGCACAAC+TGG | 0.331012 | 1.1:-75072611 | MS.gene80076:CDS |
TTTGTTTGTATTCAGGTAGT+TGG | 0.332815 | 1.1:-75073043 | MS.gene80076:intron |
GTTGCAACATCCTCAGGCTT+TGG | 0.356273 | 1.1:+75072638 | None:intergenic |
TCCATGACATCAGGCGATAA+AGG | 0.357464 | 1.1:+75070240 | None:intergenic |
CATCTATTTCCTAGTTGCTT+TGG | 0.358075 | 1.1:-75070108 | MS.gene80076:intron |
ATTAATGCTGTTAAAACATC+TGG | 0.359287 | 1.1:-75071541 | MS.gene80076:CDS |
TGGAGGACGAGTTCGTCTTA+TGG | 0.362131 | 1.1:-75070277 | MS.gene80076:CDS |
AAAACAGCTGCCTTTGCTCT+TGG | 0.371706 | 1.1:+75068241 | None:intergenic |
CTTTCTAGGGTGCTGGCATT+GGG | 0.374768 | 1.1:-75075104 | MS.gene80076:intron |
CATTGCAGTGGGATTCTACC+AGG | 0.378233 | 1.1:-75072257 | MS.gene80076:CDS |
GCTCGGTCGGCAATAGGTTC+TGG | 0.383266 | 1.1:-75075247 | MS.gene80076:CDS |
TTCCTGTCTGCAGTTTCTCT+GGG | 0.388879 | 1.1:+75075836 | None:intergenic |
TCATGCAGTGTACCAACTTC+AGG | 0.390509 | 1.1:+75075666 | None:intergenic |
CGAGTTCGTCTTATGGTATC+AGG | 0.390691 | 1.1:-75070270 | MS.gene80076:CDS |
ACAATATATTTGACAGCATC+AGG | 0.392883 | 1.1:+75074892 | None:intergenic |
CCCGCGGTGAAATTTGTGTC+AGG | 0.396001 | 1.1:-75069479 | MS.gene80076:CDS |
TCGATGCTTGCCTTCATTGT+CGG | 0.404581 | 1.1:+75068019 | None:intergenic |
CGGCATATATTCTATTATAT+AGG | 0.413923 | 1.1:+75071662 | None:intergenic |
ACAGGATAACCTGAAACTAA+TGG | 0.417448 | 1.1:-75071731 | MS.gene80076:intron |
GAACTCGCCGGCAGTGGGAT+TGG | 0.418158 | 1.1:+75077251 | None:intergenic |
ATACCAAGAGTGTCATATAA+AGG | 0.418469 | 1.1:+75075009 | None:intergenic |
GTACCAACTTCAGGATGATC+AGG | 0.427528 | 1.1:+75075675 | None:intergenic |
GATAAAACTTGTAGACGTTC+CGG | 0.427660 | 1.1:-75069535 | MS.gene80076:CDS |
GTTATAAGCTGCATTGATAA+TGG | 0.429114 | 1.1:-75070042 | MS.gene80076:CDS |
GGTACTGCTCGGTCGGCAAT+AGG | 0.429379 | 1.1:-75075253 | MS.gene80076:CDS |
TATGTGCCTTTCTAGGGTGC+TGG | 0.431926 | 1.1:-75075111 | MS.gene80076:intron |
CTCCTCTGAAGCTGATGAAC+CGG | 0.434081 | 1.1:-75075701 | MS.gene80076:CDS |
TGCAACATCCTCAGGCTTTG+GGG | 0.435671 | 1.1:+75072640 | None:intergenic |
TTATATATCCTATCTCCCTT+TGG | 0.438366 | 1.1:-75072326 | MS.gene80076:CDS |
CTGCACTCCTAAGGTACAAA+TGG | 0.438551 | 1.1:-75075294 | MS.gene80076:intron |
TTCTTTGGTATCTGTTGTCT+CGG | 0.439397 | 1.1:-75068634 | MS.gene80076:CDS |
CAGGAAAGTGGAACGTGTAT+AGG | 0.440888 | 1.1:-75075819 | MS.gene80076:intron |
ACCTTTATCGCCTGATGTCA+TGG | 0.447455 | 1.1:-75070241 | MS.gene80076:CDS |
GGTTGCATACCGGAGATATT+GGG | 0.448177 | 1.1:-75069297 | MS.gene80076:CDS |
GCAACATCCTCAGGCTTTGG+GGG | 0.451780 | 1.1:+75072641 | None:intergenic |
GTTTGTATTCAGGTAGTTGG+AGG | 0.457770 | 1.1:-75073040 | MS.gene80076:intron |
CTATTTCCTAGTTGCTTTGG+TGG | 0.461262 | 1.1:-75070105 | MS.gene80076:intron |
GGGAGAGTGACTGAAGGTTA+TGG | 0.463969 | 1.1:-75070084 | MS.gene80076:CDS |
GCCCATGCTTTCATGACATC+AGG | 0.465273 | 1.1:+75068606 | None:intergenic |
ACTTCATTGCAAATGTTGCC+GGG | 0.467289 | 1.1:-75072479 | MS.gene80076:CDS |
ACGACGTTGCGCGGTAGGTG+TGG | 0.472235 | 1.1:+75077338 | None:intergenic |
CAAATGGTTGCAACATCCTC+AGG | 0.476858 | 1.1:+75072632 | None:intergenic |
TTCACAAGGGTTTCTGAGAA+GGG | 0.483679 | 1.1:+75067848 | None:intergenic |
AGGTACAAATGGATGACATA+TGG | 0.487976 | 1.1:-75075283 | MS.gene80076:CDS |
CATCGGCGGCGGTGATGAGG+TGG | 0.489631 | 1.1:+75077298 | None:intergenic |
GGAACCCGTGTTCGTGTCGA+TGG | 0.489980 | 1.1:-75075453 | MS.gene80076:CDS |
TATTTCCTAGTTGCTTTGGT+GGG | 0.490069 | 1.1:-75070104 | MS.gene80076:intron |
CCGAAGTATTCTTTCGCTTG+AGG | 0.493077 | 1.1:+75067913 | None:intergenic |
CAAGGGTTTCTGAGAAGGGT+CGG | 0.494454 | 1.1:+75067852 | None:intergenic |
CTTCAGGATGATCAGGGAAC+CGG | 0.495883 | 1.1:+75075682 | None:intergenic |
TTTCACAAGGGTTTCTGAGA+AGG | 0.497463 | 1.1:+75067847 | None:intergenic |
TTCGTGTCGATGGAACAGTT+GGG | 0.500589 | 1.1:-75075443 | MS.gene80076:CDS |
CGCTCATAAATGTGTGCCAA+AGG | 0.501935 | 1.1:+75072310 | None:intergenic |
GTTCGTGTCGATGGAACAGT+TGG | 0.504069 | 1.1:-75075444 | MS.gene80076:CDS |
TGGATGACATATGGAGAAGC+AGG | 0.510472 | 1.1:-75075274 | MS.gene80076:CDS |
AATCTGTCCCACATTGGAGA+TGG | 0.510952 | 1.1:+75070327 | None:intergenic |
GTGCCTTTATATGACACTCT+TGG | 0.515439 | 1.1:-75075012 | MS.gene80076:intron |
AATGTGTGCCAAAGGGAGAT+AGG | 0.518134 | 1.1:+75072318 | None:intergenic |
TCCAACTGTGCGTCTTATTG+TGG | 0.518595 | 1.1:-75073133 | MS.gene80076:intron |
GGAGAAGAACTCGCCGGCAG+TGG | 0.519073 | 1.1:+75077245 | None:intergenic |
CCGCGGTGAAATTTGTGTCA+GGG | 0.519612 | 1.1:-75069478 | MS.gene80076:CDS |
CCTGACACAAATTTCACCGC+GGG | 0.525392 | 1.1:+75069479 | None:intergenic |
AAAAGAACTTACACATCTGA+AGG | 0.525694 | 1.1:+75072432 | None:intergenic |
ATTTGAACTCCATCTGATGA+TGG | 0.530846 | 1.1:+75072992 | None:intergenic |
GAGAGAAGTCATCGATGAAG+AGG | 0.533536 | 1.1:-75069323 | MS.gene80076:CDS |
TTGAGACGACGTTGCGCGGT+AGG | 0.538782 | 1.1:+75077333 | None:intergenic |
TCATACTACTCACCACAGGC+TGG | 0.541482 | 1.1:+75069985 | None:intergenic |
CGACGTTGCGCGGTAGGTGT+GGG | 0.541956 | 1.1:+75077339 | None:intergenic |
CTATATAATAGAATATATGC+CGG | 0.543592 | 1.1:-75071661 | MS.gene80076:CDS |
TTCCCTGATCATCCTGAAGT+TGG | 0.544033 | 1.1:-75075678 | MS.gene80076:CDS |
ATCTGTCCCACATTGGAGAT+GGG | 0.544892 | 1.1:+75070328 | None:intergenic |
CGCGGTGAAATTTGTGTCAG+GGG | 0.545199 | 1.1:-75069477 | MS.gene80076:CDS |
CTTCAATCCAATCCCACTGC+CGG | 0.547661 | 1.1:-75077258 | MS.gene80076:CDS |
TTGGCTGAGATGGATGCTGT+TGG | 0.551598 | 1.1:-75068220 | MS.gene80076:CDS |
TGCTTACAATGCTAAAAGAC+AGG | 0.553359 | 1.1:-75071491 | MS.gene80076:CDS |
GGGATTGGATTGAAGATGAT+CGG | 0.555289 | 1.1:+75077266 | None:intergenic |
GATATTGGGACATGGATAGC+TGG | 0.555765 | 1.1:-75069283 | MS.gene80076:CDS |
TAAAACATCTGGTGGTCTGA+AGG | 0.556698 | 1.1:-75071530 | MS.gene80076:CDS |
TATATAATAGAATATATGCC+GGG | 0.556797 | 1.1:-75071660 | MS.gene80076:intron |
GTCGTCTCAAAATCATTGAT+AGG | 0.558613 | 1.1:-75069258 | MS.gene80076:intron |
TGATCAACAATGAGCCACTC+AGG | 0.559801 | 1.1:+75075063 | None:intergenic |
GAAGAGGGATGGTTGCATAC+CGG | 0.560372 | 1.1:-75069307 | MS.gene80076:CDS |
AGAAACTGCAGACAGGAAAG+TGG | 0.560599 | 1.1:-75075831 | MS.gene80076:CDS |
AGCTTTGAGACGACGTTGCG+CGG | 0.562549 | 1.1:+75077329 | None:intergenic |
TATCATCGGCGGCGGTGATG+AGG | 0.563995 | 1.1:+75077295 | None:intergenic |
TCAGATGTATAATTCATCTC+CGG | 0.565210 | 1.1:+75069516 | None:intergenic |
TAGGAACCTCCGCACCTTTG+GGG | 0.565710 | 1.1:+75072586 | None:intergenic |
TATCCATGTCCCAATATCTC+CGG | 0.566673 | 1.1:+75069288 | None:intergenic |
ATTGCAGTGGGATTCTACCA+GGG | 0.567345 | 1.1:-75072256 | MS.gene80076:CDS |
ACTGCCGGCGAGTTCTTCTC+CGG | 0.568517 | 1.1:-75077243 | MS.gene80076:intron |
CAGCTTCAGAGGAGAGCGTA+CGG | 0.568997 | 1.1:+75075710 | None:intergenic |
GCAACCATTTGCTATACAAG+TGG | 0.569003 | 1.1:-75072620 | MS.gene80076:CDS |
CATCTGGTGGTCTGAAGGAG+AGG | 0.569239 | 1.1:-75071525 | MS.gene80076:CDS |
AACCGGTTCATCAGCTTCAG+AGG | 0.573744 | 1.1:+75075699 | None:intergenic |
CCATCTGATGATGGAAGTGA+TGG | 0.575040 | 1.1:+75073001 | None:intergenic |
TCTGCTGACTCCGACAATGA+AGG | 0.578027 | 1.1:-75068029 | MS.gene80076:intron |
GAGAAGAACTCGCCGGCAGT+GGG | 0.578110 | 1.1:+75077246 | None:intergenic |
CTCCCAGAGAAACTGCAGAC+AGG | 0.578417 | 1.1:-75075838 | MS.gene80076:CDS |
TTTGGTATCTGTTGTCTCGG+TGG | 0.579547 | 1.1:-75068631 | MS.gene80076:CDS |
TGTGCCACTTGTATAGCAAA+TGG | 0.581619 | 1.1:+75072616 | None:intergenic |
TTGCAGTGGGATTCTACCAG+GGG | 0.585254 | 1.1:-75072255 | MS.gene80076:CDS |
AAAACTAATCTGTCCCACAT+TGG | 0.586150 | 1.1:+75070321 | None:intergenic |
TGTTCCATCGACACGAACAC+GGG | 0.587652 | 1.1:+75075449 | None:intergenic |
AGAGAAGTCATCGATGAAGA+GGG | 0.588897 | 1.1:-75069322 | MS.gene80076:CDS |
CTGTTCCATCGACACGAACA+CGG | 0.589819 | 1.1:+75075448 | None:intergenic |
GCTCATAAATGTGTGCCAAA+GGG | 0.589901 | 1.1:+75072311 | None:intergenic |
CAGTAGGTCTTAGAGCTGCT+AGG | 0.592344 | 1.1:+75071704 | None:intergenic |
ATCCTGATGTCATGAAAGCA+TGG | 0.593220 | 1.1:-75068608 | MS.gene80076:CDS |
ACCACAATAAGACGCACAGT+TGG | 0.593335 | 1.1:+75073132 | None:intergenic |
GGCTCTCCAAATCCAGCCTG+TGG | 0.594459 | 1.1:-75069997 | MS.gene80076:intron |
GGCTGCTTCCCAAAACATAG+TGG | 0.595728 | 1.1:-75068586 | MS.gene80076:intron |
ATGGAGAAGCAGGTACTGCT+CGG | 0.596706 | 1.1:-75075264 | MS.gene80076:CDS |
CCATCACTTCCATCATCAGA+TGG | 0.596742 | 1.1:-75073001 | MS.gene80076:CDS |
GGTGGCTGAACCGTTTGCGA+TGG | 0.598711 | 1.1:-75068059 | MS.gene80076:CDS |
CTTCATTGCAAATGTTGCCG+GGG | 0.599877 | 1.1:-75072478 | MS.gene80076:CDS |
AATGCTGTTAAAACATCTGG+TGG | 0.601121 | 1.1:-75071538 | MS.gene80076:CDS |
CAACATCCTCAGGCTTTGGG+GGG | 0.601922 | 1.1:+75072642 | None:intergenic |
ATTGATAATGGTGACAGACT+TGG | 0.602018 | 1.1:-75070030 | MS.gene80076:CDS |
ATATAACTTGCACAAGAGCA+TGG | 0.602317 | 1.1:+75074866 | None:intergenic |
AGAAGCAGGTACTGCTCGGT+CGG | 0.605696 | 1.1:-75075260 | MS.gene80076:CDS |
AAAAGACAGGCATTATTGCA+TGG | 0.608387 | 1.1:-75071478 | MS.gene80076:intron |
TTTACTTCTGAGCAGAGCAA+GGG | 0.608749 | 1.1:-75075873 | MS.gene80076:intron |
GATAATGGTGACAGACTTGG+TGG | 0.612554 | 1.1:-75070027 | MS.gene80076:CDS |
ATCGGCGGCGGTGATGAGGT+GGG | 0.613632 | 1.1:+75077299 | None:intergenic |
GATTCATTATGGAATCCCAA+AGG | 0.616385 | 1.1:-75075221 | MS.gene80076:intron |
TTGCAATGATCCAAGAGCAA+AGG | 0.618197 | 1.1:-75068251 | MS.gene80076:CDS |
TCGTGTCGATGGAACAGTTG+GGG | 0.622671 | 1.1:-75075442 | MS.gene80076:CDS |
TCCTGATGTCATGAAAGCAT+GGG | 0.622923 | 1.1:-75068607 | MS.gene80076:CDS |
CAAGAACCCATCTCCAATGT+GGG | 0.625813 | 1.1:-75070334 | MS.gene80076:CDS |
AAGTCATCGATGAAGAGGGA+TGG | 0.631708 | 1.1:-75069318 | MS.gene80076:CDS |
GGAAGAGTTATCATCGGCGG+CGG | 0.635023 | 1.1:+75077287 | None:intergenic |
GAAGACCTCTCAATTTCACA+AGG | 0.638398 | 1.1:+75067834 | None:intergenic |
GCAAGAACCCATCTCCAATG+TGG | 0.638991 | 1.1:-75070335 | MS.gene80076:CDS |
AAAGAACTTACACATCTGAA+GGG | 0.640705 | 1.1:+75072433 | None:intergenic |
GGAACACTACAGAAGACAGT+AGG | 0.640828 | 1.1:+75071688 | None:intergenic |
TATATTCTATTATATAGGCG+AGG | 0.652935 | 1.1:+75071667 | None:intergenic |
AATATCTTTAAATTGGCACA+AGG | 0.654215 | 1.1:-75068854 | MS.gene80076:CDS |
TACCAACTTCAGGATGATCA+GGG | 0.654481 | 1.1:+75075676 | None:intergenic |
GACAGACTTGGTGGTCACGT+TGG | 0.658125 | 1.1:-75070018 | MS.gene80076:CDS |
CCTCAAGCGAAAGAATACTT+CGG | 0.659320 | 1.1:-75067913 | MS.gene80076:CDS |
ATCGGAAGAGTTATCATCGG+CGG | 0.662321 | 1.1:+75077284 | None:intergenic |
TGGCACAACTGGAACCCCAA+AGG | 0.662832 | 1.1:-75072600 | MS.gene80076:intron |
AGTACCGGAGAAGAACTCGC+CGG | 0.664704 | 1.1:+75077239 | None:intergenic |
GACATCAGGCGATAAAGGTG+AGG | 0.665171 | 1.1:+75070245 | None:intergenic |
CCCTGACACAAATTTCACCG+CGG | 0.666273 | 1.1:+75069478 | None:intergenic |
CTGACACAAATTTCACCGCG+GGG | 0.668149 | 1.1:+75069480 | None:intergenic |
ATGATCGGAAGAGTTATCAT+CGG | 0.671066 | 1.1:+75077281 | None:intergenic |
TGCAGTGGGATTCTACCAGG+GGG | 0.671319 | 1.1:-75072254 | MS.gene80076:intron |
AAGACCTCTCAATTTCACAA+GGG | 0.689748 | 1.1:+75067835 | None:intergenic |
TGACACAAATTTCACCGCGG+GGG | 0.691163 | 1.1:+75069481 | None:intergenic |
ATTGGGACATGGATAGCTGG+CGG | 0.696046 | 1.1:-75069280 | MS.gene80076:CDS |
TTTGGTGGGAGAGTGACTGA+AGG | 0.700203 | 1.1:-75070090 | MS.gene80076:CDS |
ATACCGGAGATATTGGGACA+TGG | 0.726089 | 1.1:-75069291 | MS.gene80076:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 75067849 | 75077367 | 75067849 | ID=MS.gene80076 |
chr1.1 | mRNA | 75067849 | 75077367 | 75067849 | ID=MS.gene80076.t1;Parent=MS.gene80076 |
chr1.1 | exon | 75077244 | 75077367 | 75077244 | ID=MS.gene80076.t1.exon1;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75077244 | 75077367 | 75077244 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75075820 | 75075880 | 75075820 | ID=MS.gene80076.t1.exon2;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75075820 | 75075880 | 75075820 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75075657 | 75075734 | 75075657 | ID=MS.gene80076.t1.exon3;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75075657 | 75075734 | 75075657 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75075441 | 75075512 | 75075441 | ID=MS.gene80076.t1.exon4;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75075441 | 75075512 | 75075441 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75075222 | 75075303 | 75075222 | ID=MS.gene80076.t1.exon5;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75075222 | 75075303 | 75075222 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75075013 | 75075118 | 75075013 | ID=MS.gene80076.t1.exon6;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75075013 | 75075118 | 75075013 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75074840 | 75074916 | 75074840 | ID=MS.gene80076.t1.exon7;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75074840 | 75074916 | 75074840 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75073134 | 75073178 | 75073134 | ID=MS.gene80076.t1.exon8;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75073134 | 75073178 | 75073134 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75072964 | 75073050 | 75072964 | ID=MS.gene80076.t1.exon9;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75072964 | 75073050 | 75072964 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75072601 | 75072690 | 75072601 | ID=MS.gene80076.t1.exon10;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75072601 | 75072690 | 75072601 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75072444 | 75072523 | 75072444 | ID=MS.gene80076.t1.exon11;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75072444 | 75072523 | 75072444 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75072255 | 75072348 | 75072255 | ID=MS.gene80076.t1.exon12;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75072255 | 75072348 | 75072255 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75071661 | 75071749 | 75071661 | ID=MS.gene80076.t1.exon13;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75071661 | 75071749 | 75071661 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75071479 | 75071567 | 75071479 | ID=MS.gene80076.t1.exon14;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75071479 | 75071567 | 75071479 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75070228 | 75070357 | 75070228 | ID=MS.gene80076.t1.exon15;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75070228 | 75070357 | 75070228 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75069998 | 75070116 | 75069998 | ID=MS.gene80076.t1.exon16;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75069998 | 75070116 | 75069998 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75069435 | 75069558 | 75069435 | ID=MS.gene80076.t1.exon17;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75069435 | 75069558 | 75069435 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75069259 | 75069345 | 75069259 | ID=MS.gene80076.t1.exon18;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75069259 | 75069345 | 75069259 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75068780 | 75068883 | 75068780 | ID=MS.gene80076.t1.exon19;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75068780 | 75068883 | 75068780 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75068587 | 75068672 | 75068587 | ID=MS.gene80076.t1.exon20;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75068587 | 75068672 | 75068587 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75068207 | 75068293 | 75068207 | ID=MS.gene80076.t1.exon21;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75068207 | 75068293 | 75068207 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75068030 | 75068116 | 75068030 | ID=MS.gene80076.t1.exon22;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75068030 | 75068116 | 75068030 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
chr1.1 | exon | 75067849 | 75067944 | 75067849 | ID=MS.gene80076.t1.exon23;Parent=MS.gene80076.t1 |
chr1.1 | CDS | 75067849 | 75067944 | 75067849 | ID=cds.MS.gene80076.t1;Parent=MS.gene80076.t1 |
Gene Sequence |
Protein sequence |