AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene06068

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06068.t1 MTR_8g099420 97.724 659 15 0 1 659 1 659 0.0 1342
MS.gene06068.t1 MTR_5g009350 76.748 658 152 1 1 658 1 657 0.0 1093
MS.gene06068.t1 MTR_5g009350 76.888 649 149 1 1 649 1 648 0.0 1078
MS.gene06068.t1 MTR_5g009360 75.382 654 161 0 5 658 4 657 0.0 1071
MS.gene06068.t1 MTR_5g009350 74.866 561 140 1 1 561 1 560 0.0 911
MS.gene06068.t1 MTR_5g009350 76.417 547 128 1 1 547 1 546 0.0 908
MS.gene06068.t1 MTR_5g009360 74.856 521 131 0 138 658 11 531 0.0 846
MS.gene06068.t1 MTR_4g068670 57.121 653 278 2 7 659 5 655 0.0 798
MS.gene06068.t1 MTR_1g034360 56.881 654 280 2 7 659 5 657 0.0 793
MS.gene06068.t1 MTR_7g109830 51.376 654 318 0 5 658 2 655 0.0 697
MS.gene06068.t1 MTR_1g086600 49.466 655 329 1 5 657 24 678 0.0 671
MS.gene06068.t1 MTR_1g104810 40.523 612 349 8 49 656 18 618 7.58e-152 453
MS.gene06068.t1 MTR_1g104810 40.650 615 350 8 46 656 82 685 1.74e-151 454
MS.gene06068.t1 MTR_3g082660 30.885 667 417 12 25 655 68 726 1.85e-94 307
MS.gene06068.t1 MTR_1g030290 30.640 656 401 12 42 657 55 696 1.75e-93 304
MS.gene06068.t1 MTR_3g087980 30.247 648 409 11 42 655 54 692 7.69e-90 294
MS.gene06068.t1 MTR_3g084450 25.224 670 409 22 49 656 81 720 5.23e-41 159
MS.gene06068.t1 MTR_3g084470 24.925 670 414 23 46 656 76 715 6.99e-39 153
MS.gene06068.t1 MTR_8g083170 23.088 667 429 21 49 656 83 724 6.02e-35 141
MS.gene06068.t1 MTR_3g084450 26.195 481 291 14 221 656 51 512 2.44e-34 137
MS.gene06068.t1 MTR_1g063110 24.862 362 205 15 194 541 158 466 4.69e-23 103
MS.gene06068.t1 MTR_5g007640 26.559 497 244 20 78 540 95 504 1.93e-20 95.9
MS.gene06068.t1 MTR_4g057730 28.402 338 174 16 216 541 179 460 6.35e-20 94.4
MS.gene06068.t1 MTR_4g057730 28.107 338 175 15 216 541 179 460 9.34e-20 93.2
MS.gene06068.t1 MTR_3g035130 22.470 494 294 16 41 523 1 416 4.14e-19 91.3
MS.gene06068.t1 MTR_3g035130 22.470 494 294 16 41 523 1 416 4.27e-19 91.7
MS.gene06068.t1 MTR_2g095510 27.042 355 182 16 203 541 164 457 6.84e-19 90.9
MS.gene06068.t1 MTR_4g057730 27.273 319 167 13 216 523 179 443 7.10e-19 90.5
MS.gene06068.t1 MTR_1g063120 24.065 428 245 16 216 632 187 545 1.03e-18 90.5
MS.gene06068.t1 MTR_1g026310 25.150 334 186 12 222 545 203 482 1.39e-18 90.1
MS.gene06068.t1 MTR_2g095510 26.347 334 176 14 203 523 164 440 3.05e-18 88.6
MS.gene06068.t1 MTR_1g090737 26.761 355 182 15 204 541 191 484 4.30e-18 88.6
MS.gene06068.t1 MTR_5g027480 26.912 353 191 13 214 552 185 484 5.89e-18 88.2
MS.gene06068.t1 MTR_3g064420 22.563 554 298 22 81 589 41 508 7.93e-18 87.8
MS.gene06068.t1 MTR_8g039720 24.402 418 240 14 221 632 205 552 8.55e-18 87.8
MS.gene06068.t1 MTR_3g460770 25.905 359 203 14 203 550 162 468 1.64e-17 86.7
MS.gene06068.t1 MTR_4g005750 22.699 489 285 15 81 550 54 468 5.17e-17 85.1
MS.gene06068.t1 MTR_2g105570 22.921 493 297 17 65 541 41 466 1.71e-16 83.6
MS.gene06068.t1 MTR_8g074120 24.886 438 238 19 126 538 40 411 4.57e-16 82.0
MS.gene06068.t1 MTR_3g088870 25.627 359 209 11 176 523 148 459 8.21e-15 78.2
MS.gene06068.t1 MTR_5g023730 21.676 549 346 17 66 596 32 514 1.07e-13 74.7
MS.gene06068.t1 MTR_1g073180 31.818 154 100 5 387 538 321 471 8.58e-12 68.6
MS.gene06068.t1 MTR_1g073180 31.818 154 100 5 387 538 299 449 9.36e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene06068.t1 AT4G23850 70.624 657 193 0 1 657 1 657 0.0 1016
MS.gene06068.t1 AT4G11030 70.106 659 197 0 1 659 1 659 0.0 1004
MS.gene06068.t1 AT1G64400 67.431 654 212 1 7 659 6 659 0.0 959
MS.gene06068.t1 AT1G49430 53.211 654 304 2 8 659 8 661 0.0 745
MS.gene06068.t1 AT2G47240 48.620 652 335 0 5 656 2 653 0.0 660
MS.gene06068.t1 AT2G47240 48.620 652 335 0 5 656 2 653 0.0 660
MS.gene06068.t1 AT2G47240 48.620 652 335 0 5 656 2 653 0.0 660
MS.gene06068.t1 AT2G47240 49.158 594 302 0 63 656 1 594 0.0 608
MS.gene06068.t1 AT1G49430 49.495 495 249 1 8 501 8 502 0.0 531
MS.gene06068.t1 AT5G27600 41.509 636 354 10 27 655 63 687 1.37e-157 471
MS.gene06068.t1 AT3G05970 40.843 617 350 8 44 656 83 688 2.44e-149 449
MS.gene06068.t1 AT2G04350 31.618 680 395 14 25 655 61 719 4.10e-101 325
MS.gene06068.t1 AT2G04350 31.618 680 395 14 25 655 61 719 4.10e-101 325
MS.gene06068.t1 AT1G77590 30.746 657 391 14 42 655 55 690 5.21e-90 295
MS.gene06068.t1 AT1G77590 33.156 564 327 13 121 655 2 544 2.13e-84 276
MS.gene06068.t1 AT3G23790 25.484 671 404 26 49 656 85 722 4.51e-40 157
MS.gene06068.t1 AT4G14070 25.000 700 419 28 18 655 71 726 7.12e-37 147
MS.gene06068.t1 AT4G19010 29.787 329 179 11 218 541 199 480 7.38e-22 100
MS.gene06068.t1 AT1G51680 25.819 519 264 19 55 540 48 478 2.83e-20 95.5
MS.gene06068.t1 AT1G51680 25.819 519 264 19 55 540 48 478 2.92e-20 95.1
MS.gene06068.t1 AT1G51680 25.819 519 264 19 55 540 48 478 3.90e-20 95.1
MS.gene06068.t1 AT3G21240 28.739 341 169 14 217 540 188 471 5.58e-20 94.4
MS.gene06068.t1 AT3G21240 28.739 341 169 14 217 540 188 471 6.20e-20 94.0
MS.gene06068.t1 AT3G21240 28.739 341 169 14 217 540 188 471 6.20e-20 94.0
MS.gene06068.t1 AT1G66120 24.954 545 294 25 51 565 20 479 1.72e-19 93.2
MS.gene06068.t1 AT4G05160 27.920 351 190 15 199 540 165 461 1.06e-18 90.5
MS.gene06068.t1 AT2G47245 41.935 93 54 0 6 98 36 128 1.60e-17 79.7
MS.gene06068.t1 AT1G20500 25.309 324 185 12 222 540 196 467 3.12e-17 85.9
MS.gene06068.t1 AT1G20480 27.160 324 178 13 222 540 212 482 4.08e-15 79.3
MS.gene06068.t1 AT5G38120 25.287 435 228 19 222 646 198 545 3.83e-13 72.8
MS.gene06068.t1 AT1G62940 25.762 361 202 16 203 550 160 467 1.40e-12 71.2
MS.gene06068.t1 AT3G21230 33.728 169 104 7 387 550 330 495 5.10e-12 69.3
MS.gene06068.t1 AT3G21230 33.529 170 105 7 386 550 329 495 5.63e-12 69.3
MS.gene06068.t1 AT3G21230 33.728 169 104 7 387 550 330 495 6.90e-12 68.9

Find 161 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGACCTCCTTTACCATATT+TGG 0.156596 4.1:+4648857 MS.gene06068:CDS
AATACAAGTTTGTCCATTAA+TGG 0.197163 4.1:-4648411 None:intergenic
AACATTATTACACTCTTATC+TGG 0.199872 4.1:+4647166 MS.gene06068:CDS
TCCATTCGTGCTTGTGGTTA+TGG 0.243465 4.1:+4644988 MS.gene06068:CDS
TATGACTTGGTGATCAAAAT+TGG 0.249377 4.1:+4644961 MS.gene06068:CDS
AAGAGGAGAAATCTGTATTA+AGG 0.259788 4.1:+4648935 MS.gene06068:CDS
TTGACAGAAAAGATTAATAA+TGG 0.263355 4.1:+4648157 MS.gene06068:CDS
GGAGTAAAATGCGGCATTTA+TGG 0.277750 4.1:+4645809 MS.gene06068:CDS
TCCAAACACACTTCCAAATA+TGG 0.279040 4.1:-4648870 None:intergenic
CAAAGATGGTAGGCCATCTA+TGG 0.282205 4.1:+4643777 MS.gene06068:CDS
GTTCCTTTATATGATACTTT+AGG 0.288914 4.1:+4646308 MS.gene06068:CDS
GATCAGGTAAAACAAGCTTT+AGG 0.291395 4.1:+4648543 MS.gene06068:intron
TCTTCAAGTGCTTTCTTGCT+TGG 0.295970 4.1:-4649491 None:intergenic
TGAAACAGCAGCTCCATTAA+TGG 0.300048 4.1:+4648398 MS.gene06068:CDS
AGTGCATCATATCCCATTTC+AGG 0.308365 4.1:-4648900 None:intergenic
TTGTTTCAGATATGGATCTA+TGG 0.308753 4.1:+4649431 MS.gene06068:intron
CTTCAAGTGCTTTCTTGCTT+GGG 0.325012 4.1:-4649490 None:intergenic
CCATTCGTGCTTGTGGTTAT+GGG 0.333564 4.1:+4644989 MS.gene06068:CDS
GTGGTGCTGCAATAGGTTTC+TGG 0.337284 4.1:+4647654 MS.gene06068:CDS
CATAGATGGCCTACCATCTT+TGG 0.340044 4.1:-4643776 None:intergenic
TTGAGATACTCTGCTGCCTT+TGG 0.342904 4.1:-4646617 None:intergenic
CCAAGCATATTTATTTCGTT+TGG 0.345668 4.1:-4648828 None:intergenic
GCTCATATCTTACAAGGATA+TGG 0.350220 4.1:+4648645 MS.gene06068:CDS
ACAGATTTCTCCTCTTGGTT+TGG 0.353378 4.1:-4648928 None:intergenic
ATCAGGTAAAACAAGCTTTA+GGG 0.354022 4.1:+4648544 MS.gene06068:intron
TGACAGAAAAGATTAATAAT+GGG 0.357421 4.1:+4648158 MS.gene06068:CDS
TGAAACAGACGATGTTCAAT+TGG 0.360475 4.1:+4648188 MS.gene06068:CDS
CGACCCAGCATTGGATTTGT+TGG 0.367544 4.1:-4644797 None:intergenic
ACCATATTTGGAAGTGTGTT+TGG 0.368130 4.1:+4648869 MS.gene06068:CDS
ATAAAGTCCATGAGCATTGC+AGG 0.376947 4.1:-4646282 None:intergenic
TCCATCAATCATAACCTCTT+TGG 0.384969 4.1:-4649000 None:intergenic
GCAAGAAAGCACTTGAAGAT+TGG 0.395350 4.1:+4649495 MS.gene06068:CDS
ACCAAAGAGGTTATGATTGA+TGG 0.395883 4.1:+4648999 MS.gene06068:CDS
CACTTGCACACATCTTTGAC+AGG 0.399229 4.1:+4647606 MS.gene06068:CDS
ATCTATTAAACAGGAGATAT+CGG 0.400047 4.1:+4649104 MS.gene06068:intron
TTTGGAGTCTGTACCTGAAA+TGG 0.402444 4.1:+4648887 MS.gene06068:CDS
AGCAAGAAGTTGAGAAGATC+GGG 0.409532 4.1:+4646768 MS.gene06068:CDS
ATACCTAAAGTATCATATAA+AGG 0.411632 4.1:-4646311 None:intergenic
ATCTCTCCTCCTCCCATTGA+AGG 0.413564 4.1:+4643832 MS.gene06068:CDS
CATTTATGGTGCCAATTGTC+CGG 0.414011 4.1:+4645823 MS.gene06068:CDS
ATATGGAGTGGTGCTGCAAT+AGG 0.415085 4.1:+4647647 MS.gene06068:CDS
ATCGGAGAGTGGCAACCTAA+TGG 0.419480 4.1:+4649122 MS.gene06068:CDS
TGTGTAGCAATTGTGAGCTT+TGG 0.422578 4.1:+4646725 MS.gene06068:intron
CATAATCCATTCCGGACAAT+TGG 0.424577 4.1:-4645834 None:intergenic
CAAGAAAGCACTTGAAGATT+GGG 0.431537 4.1:+4649496 MS.gene06068:CDS
AAGGCGAAACATTACATACT+TGG 0.431539 4.1:+4649569 MS.gene06068:CDS
CGTTCCATGTCAAATGGAAC+TGG 0.435440 4.1:-4649774 None:intergenic
TCCATGCTCATAATCCATTC+CGG 0.452071 4.1:-4645842 None:intergenic
AGAGGAGAAATCTGTATTAA+GGG 0.455958 4.1:+4648936 MS.gene06068:CDS
CTGCAATAGGTTTCTGGCGA+GGG 0.458363 4.1:+4647660 MS.gene06068:CDS
CATTCCCATTCACTATTTCA+CGG 0.460333 4.1:-4644820 None:intergenic
TAATTTAGGTGCCGGGGCTG+TGG 0.461327 4.1:+4646402 MS.gene06068:intron
AATAAATATGCTTGGTATGG+TGG 0.462971 4.1:+4648836 MS.gene06068:CDS
CCTTCGACATGTTTCGATAG+AGG 0.465301 4.1:-4648600 None:intergenic
GCAGGATATCAAATTGTTGA+TGG 0.465544 4.1:+4647831 MS.gene06068:intron
ATTGGATATCAATACTCCCT+TGG 0.466623 4.1:-4647140 None:intergenic
CGATACACAGGACCCATAGA+TGG 0.469476 4.1:-4643790 None:intergenic
AGATCACGTTCCATGTCAAA+TGG 0.469962 4.1:-4649780 None:intergenic
CTTGAACATAAATATTCTCC+AGG 0.470779 4.1:-4649217 None:intergenic
CGAAATAAATATGCTTGGTA+TGG 0.474332 4.1:+4648833 MS.gene06068:CDS
GTTTGCCACTTGAATTTGCC+AGG 0.476179 4.1:-4644925 None:intergenic
TTGGATATCAATACTCCCTT+GGG 0.479790 4.1:-4647139 None:intergenic
ACATGTATCGAGACCTTCAA+TGG 0.481926 4.1:-4643845 None:intergenic
TTAATACAGATTTCTCCTCT+TGG 0.482345 4.1:-4648933 None:intergenic
TTCAACCGAAAGAACCTGTA+TGG 0.482850 4.1:-4649028 None:intergenic
ATTGATGGATGGTTCCATAC+AGG 0.485921 4.1:+4649014 MS.gene06068:CDS
GAAACAGACGATGTTCAATT+GGG 0.488745 4.1:+4648189 MS.gene06068:CDS
GAGTGTAATAATGTTCTCAT+TGG 0.496079 4.1:-4647158 None:intergenic
CGGGGTGAAAATATATTTGT+GGG 0.499061 4.1:+4646787 MS.gene06068:CDS
ATTTCACGGCGACCCAGCAT+TGG 0.501659 4.1:-4644806 None:intergenic
ATGTACACAAGTGGAACAAC+CGG 0.501819 4.1:+4647112 MS.gene06068:CDS
GGTCGCCGTGAAATAGTGAA+TGG 0.503886 4.1:+4644815 MS.gene06068:CDS
TTCGTTTGGTATTGTTACAA+AGG 0.505019 4.1:-4648814 None:intergenic
AAGCAAGAAGTTGAGAAGAT+CGG 0.505418 4.1:+4646767 MS.gene06068:CDS
TTCTCTCTGTGAAGATTCAA+AGG 0.507257 4.1:+4649550 MS.gene06068:CDS
AAAGATTGCGAAGGAAAAGA+AGG 0.508450 4.1:+4649601 MS.gene06068:CDS
TCGGGGTGAAAATATATTTG+TGG 0.508979 4.1:+4646786 MS.gene06068:CDS
CAATACTCCCTTGGGATCAC+CGG 0.513756 4.1:-4647131 None:intergenic
TGAAGGTCTCGATACATGTT+GGG 0.514347 4.1:+4643849 MS.gene06068:CDS
TTTCAGGCCTGCAATGCTCA+TGG 0.519473 4.1:+4646275 MS.gene06068:intron
TCTGGGATGAAGCAGATACT+AGG 0.520971 4.1:+4647184 MS.gene06068:CDS
CACACTTCCAAATATGGTAA+AGG 0.521446 4.1:-4648864 None:intergenic
GTATCCAACAAATCCAATGC+TGG 0.523005 4.1:+4644793 MS.gene06068:CDS
GGACAAACTTGTATTCAGTA+AGG 0.526680 4.1:+4648419 MS.gene06068:CDS
ATGACTTGGTGATCAAAATT+GGG 0.527547 4.1:+4644962 MS.gene06068:CDS
TTGGAGTCTGTACCTGAAAT+GGG 0.528444 4.1:+4648888 MS.gene06068:CDS
CAAATGTTAATTTAGGTGCC+GGG 0.528739 4.1:+4646395 MS.gene06068:intron
ACATTATTACACTCTTATCT+GGG 0.532870 4.1:+4647167 MS.gene06068:CDS
GGGAAGTCCATTCGTGCTTG+TGG 0.535853 4.1:+4644982 MS.gene06068:CDS
CCCATAACCACAAGCACGAA+TGG 0.537258 4.1:-4644989 None:intergenic
CATTCGTGCTTGTGGTTATG+GGG 0.538296 4.1:+4644990 MS.gene06068:CDS
TTGAAGGTCTCGATACATGT+TGG 0.538408 4.1:+4643848 MS.gene06068:CDS
ATGGTGCCAATTGTCCGGAA+TGG 0.539782 4.1:+4645828 MS.gene06068:CDS
CCAAACGAAATAAATATGCT+TGG 0.541853 4.1:+4648828 MS.gene06068:CDS
ATAAATATGCTTGGTATGGT+GGG 0.541863 4.1:+4648837 MS.gene06068:CDS
AAAGCTAGAGATGCCAAAGA+TGG 0.548876 4.1:+4643763 MS.gene06068:CDS
GACAGAAAAGATTAATAATG+GGG 0.550091 4.1:+4648159 MS.gene06068:CDS
GGTCTTACTGAAACATGTGC+TGG 0.553884 4.1:+4648789 MS.gene06068:intron
CTTTGACAGGATTATTGAAG+AGG 0.554806 4.1:+4647619 MS.gene06068:CDS
ATATGTTGCTGTTGAAAACC+TGG 0.555433 4.1:+4649199 MS.gene06068:CDS
TGGAACAACCGGTGATCCCA+AGG 0.559190 4.1:+4647123 MS.gene06068:CDS
TGATCCAGTTCCATTTGACA+TGG 0.562355 4.1:+4649770 MS.gene06068:CDS
TCCGGAATGGATTATGAGCA+TGG 0.562688 4.1:+4645841 MS.gene06068:CDS
ACTTGTGCTCATATCTTACA+AGG 0.571352 4.1:+4648639 MS.gene06068:CDS
TTTGACAGGATTATTGAAGA+GGG 0.573469 4.1:+4647620 MS.gene06068:CDS
CTGTCAAAGATGTGTGCAAG+TGG 0.575736 4.1:-4647605 None:intergenic
TTGCAGCAAGTTGCATAGCA+TGG 0.578506 4.1:+4648359 MS.gene06068:intron
TCTATCAAGCACACGGGGAA+CGG 0.579381 4.1:-4647890 None:intergenic
TATCCAACAAATCCAATGCT+GGG 0.580274 4.1:+4644794 MS.gene06068:CDS
GTCGCCGTGAAATAGTGAAT+GGG 0.585588 4.1:+4644816 MS.gene06068:CDS
AATCTGTATTAAGGGTGGTA+CGG 0.586331 4.1:+4648944 MS.gene06068:CDS
AAGTTGCATAGCATGGAAAG+AGG 0.589758 4.1:+4648366 MS.gene06068:CDS
TCAAGCAAATGATATGAAGA+TGG 0.591630 4.1:+4649520 MS.gene06068:CDS
TATAACAAACTCCACAGCCC+CGG 0.592002 4.1:-4646413 None:intergenic
AAAGATGGTAGGCCATCTAT+GGG 0.593009 4.1:+4643778 MS.gene06068:CDS
TCGAGACCTTCAATGGGAGG+AGG 0.593915 4.1:-4643838 None:intergenic
GCTATTGAAGACATTTCCAA+AGG 0.599427 4.1:+4646601 MS.gene06068:intron
CATGTATCGAGACCTTCAAT+GGG 0.600238 4.1:-4643844 None:intergenic
AGTTGCATAGCATGGAAAGA+GGG 0.608259 4.1:+4648367 MS.gene06068:CDS
TGTACGATAATGTACACAAG+TGG 0.608897 4.1:+4647103 MS.gene06068:CDS
GCTGCAATAGGTTTCTGGCG+AGG 0.609644 4.1:+4647659 MS.gene06068:CDS
AAGAGGTTATGATTGATGGA+TGG 0.610516 4.1:+4649003 MS.gene06068:CDS
TTATTGAAGAGGGAATCATA+TGG 0.611911 4.1:+4647630 MS.gene06068:CDS
GTATCGTAGCTGTTTCACTA+AGG 0.612811 4.1:+4643807 MS.gene06068:CDS
ACAGAAAAGATTAATAATGG+GGG 0.613428 4.1:+4648160 MS.gene06068:CDS
AAATGTTAATTTAGGTGCCG+GGG 0.619376 4.1:+4646396 MS.gene06068:intron
AATATATTTAAGCTTTCACA+AGG 0.619823 4.1:+4649173 MS.gene06068:CDS
AGATAAATCATTCATCGTTG+AGG 0.621996 4.1:+4643735 MS.gene06068:CDS
GTTTGTTATATCTCATGCAG+AGG 0.622041 4.1:+4646426 MS.gene06068:CDS
CTAGAGATGCCAAAGATGGT+AGG 0.622804 4.1:+4643767 MS.gene06068:CDS
TGCAATAGGTTTCTGGCGAG+GGG 0.623396 4.1:+4647661 MS.gene06068:CDS
ACGTGAAGACCTCACCAAAG+AGG 0.625025 4.1:+4648986 MS.gene06068:CDS
ACTTCCAAATATGGTAAAGG+AGG 0.625367 4.1:-4648861 None:intergenic
TCAGGTAAAACAAGCTTTAG+GGG 0.625708 4.1:+4648545 MS.gene06068:intron
GTGAAACAGCTACGATACAC+AGG 0.631708 4.1:-4643802 None:intergenic
AGAGCTCTTAAAGATTGCGA+AGG 0.638312 4.1:+4649592 MS.gene06068:CDS
CAATCATAACCTCTTTGGTG+AGG 0.639766 4.1:-4648995 None:intergenic
CAAAGATGTGTGCAAGTGGA+AGG 0.647303 4.1:-4647601 None:intergenic
TTACAAAGAAGTGTATGACT+TGG 0.648434 4.1:+4644948 MS.gene06068:CDS
TGTAGCCTGGCAAATTCAAG+TGG 0.648485 4.1:+4644920 MS.gene06068:intron
TGTACACTCTATCAAGCACA+CGG 0.649605 4.1:-4647897 None:intergenic
TTGGGTTAACAACAGCGACA+AGG 0.651672 4.1:-4649472 None:intergenic
CAGGTAAAACAAGCTTTAGG+GGG 0.652277 4.1:+4648546 MS.gene06068:intron
GAAGAGGGAATCATATGGAG+TGG 0.653221 4.1:+4647635 MS.gene06068:CDS
GGAGAAATCTGTATTAAGGG+TGG 0.664225 4.1:+4648939 MS.gene06068:CDS
CCTCTATCGAAACATGTCGA+AGG 0.667299 4.1:+4648600 MS.gene06068:CDS
ACACGTTACTTACTATGTGT+AGG 0.669505 4.1:-4648212 None:intergenic
GGAACAACCGGTGATCCCAA+GGG 0.672635 4.1:+4647124 MS.gene06068:CDS
GCACTTGCAACCAAACCAAG+AGG 0.675688 4.1:+4648918 MS.gene06068:CDS
GCAGTTGCTTAAGTACTACC+AGG 0.676803 4.1:+4649833 MS.gene06068:CDS
AAACAGGAGATATCGGAGAG+TGG 0.676905 4.1:+4649111 MS.gene06068:intron
GTATCGAGACCTTCAATGGG+AGG 0.679829 4.1:-4643841 None:intergenic
TGAAGAAAAGAAGATACCTG+AGG 0.695780 4.1:+4646465 MS.gene06068:CDS
CATTGACGAGATGTACAAGA+CGG 0.697605 4.1:+4650153 MS.gene06068:CDS
TACACTCTATCAAGCACACG+GGG 0.700121 4.1:-4647895 None:intergenic
GTGCTTGATAGAGTGTACAC+AGG 0.706474 4.1:+4647901 MS.gene06068:CDS
GAGCACAAGTCACAACACGC+AGG 0.710027 4.1:-4648626 None:intergenic
TGGTAGTACTTAAGCAACTG+CGG 0.711513 4.1:-4649831 None:intergenic
GTACACTCTATCAAGCACAC+GGG 0.715609 4.1:-4647896 None:intergenic
GCAAGAAGTTGAGAAGATCG+GGG 0.748481 4.1:+4646769 MS.gene06068:CDS
GGAATGGATTATGAGCATGG+AGG 0.791685 4.1:+4645844 MS.gene06068:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAATTTATGTTTTACA+TGG - chr4.1:4644303-4644322 None:intergenic 10.0%
!! TTGGAAAATAAATATTAAAG+TGG - chr4.1:4646378-4646397 None:intergenic 15.0%
!! TTTCATTGCATTATTATTAT+TGG - chr4.1:4648110-4648129 None:intergenic 15.0%
!!! AAAAAATGAAATAGCATTTT+AGG - chr4.1:4647512-4647531 None:intergenic 15.0%
!!! AAATATTTGACTTAAGTTAT+CGG - chr4.1:4645422-4645441 None:intergenic 15.0%
!!! ACATATTTTAAGATAATTTC+AGG + chr4.1:4646259-4646278 MS.gene06068:intron 15.0%
!!! ATATATATATTGCTTGTTTT+AGG + chr4.1:4645787-4645806 MS.gene06068:intron 15.0%
!!! TAAAATGCTATTTCATTTTT+TGG + chr4.1:4647511-4647530 MS.gene06068:intron 15.0%
!!! TATATATATTGCTTGTTTTA+GGG + chr4.1:4645788-4645807 MS.gene06068:intron 15.0%
!!! TATTTTCCAAATGTTAATTT+AGG + chr4.1:4646388-4646407 MS.gene06068:intron 15.0%
!! AATATATTTAAGCTTTCACA+AGG + chr4.1:4649173-4649192 MS.gene06068:CDS 20.0%
!! ATGGAATTAGAAAGATATTA+TGG - chr4.1:4650006-4650025 None:intergenic 20.0%
!! ATTTGTTCTTATACAATGTT+TGG + chr4.1:4646131-4646150 MS.gene06068:intron 20.0%
!! GAGTTTCATAAAATATCATA+TGG + chr4.1:4645318-4645337 MS.gene06068:intron 20.0%
!! GGAATAAATAATCTAAACAA+TGG + chr4.1:4644395-4644414 MS.gene06068:intron 20.0%
!! GTAACAATAAATTTGCATAA+TGG - chr4.1:4644878-4644897 None:intergenic 20.0%
!! TATGCAAAAATAATCAGAAA+AGG - chr4.1:4645055-4645074 None:intergenic 20.0%
!! TGACAGAAAAGATTAATAAT+GGG + chr4.1:4648158-4648177 MS.gene06068:CDS 20.0%
!! TGAGAACTAATAGAAATAAT+CGG + chr4.1:4645223-4645242 MS.gene06068:intron 20.0%
!! TGGAATTAGAAAGATATTAT+GGG - chr4.1:4650005-4650024 None:intergenic 20.0%
!! TTAAAGTGGTAACATAATAT+AGG - chr4.1:4646364-4646383 None:intergenic 20.0%
!! TTGACAGAAAAGATTAATAA+TGG + chr4.1:4648157-4648176 MS.gene06068:CDS 20.0%
!! TTGATGTGATTATAGTATAT+TGG + chr4.1:4647731-4647750 MS.gene06068:intron 20.0%
!!! AAATTTTAACAAGTTATACC+TGG - chr4.1:4649854-4649873 None:intergenic 20.0%
!!! AATATTTGACTTAAGTTATC+GGG - chr4.1:4645421-4645440 None:intergenic 20.0%
!!! ATACCTAAAGTATCATATAA+AGG - chr4.1:4646314-4646333 None:intergenic 20.0%
!!! ATGAATTTGTTTTCCTTTAA+AGG + chr4.1:4649303-4649322 MS.gene06068:intron 20.0%
!!! ATTATTTCTATTAGTTCTCA+AGG - chr4.1:4645223-4645242 None:intergenic 20.0%
!!! ATTGTTTTATCGATATTTTG+TGG + chr4.1:4646994-4647013 MS.gene06068:intron 20.0%
!!! CAAAAGATTCTTTTTAAACA+TGG + chr4.1:4648745-4648764 MS.gene06068:intron 20.0%
!!! CAAAATGCTTTTACTTAAAT+GGG - chr4.1:4647311-4647330 None:intergenic 20.0%
!!! GAGAATTTTGAATTAGTTTT+TGG - chr4.1:4645629-4645648 None:intergenic 20.0%
!!! GGTATAACTTGTTAAAATTT+TGG + chr4.1:4649854-4649873 MS.gene06068:intron 20.0%
!!! TATTTTCTTAACTCCTTTAA+AGG - chr4.1:4649319-4649338 None:intergenic 20.0%
!!! TCAAGAGATTTATTTTTCAA+AGG - chr4.1:4644151-4644170 None:intergenic 20.0%
!!! TGTCATTTATGTATTAGAAT+AGG + chr4.1:4644374-4644393 MS.gene06068:intron 20.0%
!!! TTTTCTGATTATTTTTGCAT+AGG + chr4.1:4645054-4645073 MS.gene06068:intron 20.0%
! AAAAATGTACATACAACAAG+AGG + chr4.1:4644506-4644525 MS.gene06068:intron 25.0%
! AAAATGTACATACAACAAGA+GGG + chr4.1:4644507-4644526 MS.gene06068:intron 25.0%
! AAAGGAGTTAAGAAAATATG+TGG + chr4.1:4649321-4649340 MS.gene06068:intron 25.0%
! AACATTATTACACTCTTATC+TGG + chr4.1:4647166-4647185 MS.gene06068:CDS 25.0%
! AAGAGATGGAAATTAGAATA+AGG - chr4.1:4648068-4648087 None:intergenic 25.0%
! AATACAAGTTTGTCCATTAA+TGG - chr4.1:4648414-4648433 None:intergenic 25.0%
! AATCTTTCATTACTGAATGA+AGG + chr4.1:4647707-4647726 MS.gene06068:intron 25.0%
! ACAGAAAAGATTAATAATGG+GGG + chr4.1:4648160-4648179 MS.gene06068:CDS 25.0%
! ACATTATTACACTCTTATCT+GGG + chr4.1:4647167-4647186 MS.gene06068:CDS 25.0%
! AGTACTTCTAAACTATTCAA+AGG - chr4.1:4649275-4649294 None:intergenic 25.0%
! ATCTATTAAACAGGAGATAT+CGG + chr4.1:4649104-4649123 MS.gene06068:intron 25.0%
! ATTATATGGCAAAACCTAAA+CGG + chr4.1:4645370-4645389 MS.gene06068:intron 25.0%
! CAAGAAAAGATACTAATATG+AGG - chr4.1:4645746-4645765 None:intergenic 25.0%
! CGAATTAAGATTACTTTGAT+AGG + chr4.1:4644203-4644222 MS.gene06068:intron 25.0%
! CTGATAAATATACAACACAA+AGG - chr4.1:4645986-4646005 None:intergenic 25.0%
! GAAATAAATCAATCCAAACA+AGG + chr4.1:4645504-4645523 MS.gene06068:intron 25.0%
! GACAGAAAAGATTAATAATG+GGG + chr4.1:4648159-4648178 MS.gene06068:CDS 25.0%
! GAGAACTAATAGAAATAATC+GGG + chr4.1:4645224-4645243 MS.gene06068:intron 25.0%
! GGAATTAGAAAGATATTATG+GGG - chr4.1:4650004-4650023 None:intergenic 25.0%
! GTAAGACATGTTAAGTTAAA+AGG - chr4.1:4646241-4646260 None:intergenic 25.0%
! GTACTTCTAAACTATTCAAA+GGG - chr4.1:4649274-4649293 None:intergenic 25.0%
! GTTCCTTTATATGATACTTT+AGG + chr4.1:4646308-4646327 MS.gene06068:CDS 25.0%
! TAAAAGGAGCAAAAGAAAAT+TGG - chr4.1:4650050-4650069 None:intergenic 25.0%
! TGTGGAGTAATGATATTAAA+AGG + chr4.1:4649339-4649358 MS.gene06068:intron 25.0%
! TTAAACTGTTTATCCAAACA+TGG - chr4.1:4645080-4645099 None:intergenic 25.0%
! TTCAAAATATTGTCAAACAG+CGG - chr4.1:4647404-4647423 None:intergenic 25.0%
! TTTCGATTAGATCGAAATAT+CGG - chr4.1:4644586-4644605 None:intergenic 25.0%
! TTTGATTGAATGAATTTGCA+TGG + chr4.1:4644002-4644021 MS.gene06068:intron 25.0%
!! ATAATTTTCATGCTTCCATT+AGG - chr4.1:4649140-4649159 None:intergenic 25.0%
!! ATCTTTCTTTGTTTCAGATA+TGG + chr4.1:4649423-4649442 MS.gene06068:intron 25.0%
!! ATTATGATCCATTTTGAACA+TGG + chr4.1:4646058-4646077 MS.gene06068:intron 25.0%
!! CCAAAATGCTTTTACTTAAA+TGG - chr4.1:4647312-4647331 None:intergenic 25.0%
!! TTAAACATGGACATGATTTT+TGG + chr4.1:4648758-4648777 MS.gene06068:intron 25.0%
!! TTGTTCTTTTTGTAGTTGAA+AGG + chr4.1:4649720-4649739 MS.gene06068:intron 25.0%
!! TTTTATCGATATTTTGTGGT+TGG + chr4.1:4646998-4647017 MS.gene06068:intron 25.0%
!! TTTTTCTTCCATGTTCAAAA+TGG - chr4.1:4646069-4646088 None:intergenic 25.0%
!!! AAGTAACGTGTTTTAAATGA+TGG + chr4.1:4648224-4648243 MS.gene06068:intron 25.0%
!!! AGTTTTTTAATGTATGTCAC+AGG + chr4.1:4647033-4647052 MS.gene06068:intron 25.0%
!!! ATTTGCATGGTTTTAAATTG+TGG + chr4.1:4644015-4644034 MS.gene06068:intron 25.0%
!!! ATTTTTTCACAAACATCACA+TGG - chr4.1:4647969-4647988 None:intergenic 25.0%
!!! CCATTTAAGTAAAAGCATTT+TGG + chr4.1:4647309-4647328 MS.gene06068:intron 25.0%
!!! GTTAGAGTTGATATACTTTT+TGG + chr4.1:4644465-4644484 MS.gene06068:intron 25.0%
!!! GTTTTTTAATGTATGTCACA+GGG + chr4.1:4647034-4647053 MS.gene06068:intron 25.0%
!!! TTAGTTCTGATTGTTTTTGA+GGG + chr4.1:4644747-4644766 MS.gene06068:intron 25.0%
!!! TTTAGTTCTGATTGTTTTTG+AGG + chr4.1:4644746-4644765 MS.gene06068:intron 25.0%
!!! TTTATATTTCTAGCTTAGTC+TGG - chr4.1:4645396-4645415 None:intergenic 25.0%
AAGAGGAGAAATCTGTATTA+AGG + chr4.1:4648935-4648954 MS.gene06068:CDS 30.0%
AATAAATATGCTTGGTATGG+TGG + chr4.1:4648836-4648855 MS.gene06068:CDS 30.0%
AATAATACATTGCTACCACA+CGG - chr4.1:4646512-4646531 None:intergenic 30.0%
AATGGCAAAAATGAAAGAGA+GGG - chr4.1:4644860-4644879 None:intergenic 30.0%
AGAGAATAACAAAACAAAGG+CGG + chr4.1:4645289-4645308 MS.gene06068:intron 30.0%
AGAGGAGAAATCTGTATTAA+GGG + chr4.1:4648936-4648955 MS.gene06068:CDS 30.0%
AGATAAATCATTCATCGTTG+AGG + chr4.1:4643735-4643754 MS.gene06068:CDS 30.0%
ATAAATATGCTTGGTATGGT+GGG + chr4.1:4648837-4648856 MS.gene06068:CDS 30.0%
ATCAGGTAAAACAAGCTTTA+GGG + chr4.1:4648544-4648563 MS.gene06068:intron 30.0%
ATGACAAATTTGCAACAGAT+AGG - chr4.1:4646855-4646874 None:intergenic 30.0%
ATTGTTTGTTCGAATCAAGA+CGG - chr4.1:4648476-4648495 None:intergenic 30.0%
CAGAGAGAATAACAAAACAA+AGG + chr4.1:4645286-4645305 MS.gene06068:intron 30.0%
CATGTCATTGTTATCAATGT+AGG + chr4.1:4645261-4645280 MS.gene06068:intron 30.0%
CATTTCTTCACGTGTTAATT+TGG + chr4.1:4643974-4643993 MS.gene06068:intron 30.0%
CCAAACGAAATAAATATGCT+TGG + chr4.1:4648828-4648847 MS.gene06068:CDS 30.0%
CCAAGCATATTTATTTCGTT+TGG - chr4.1:4648831-4648850 None:intergenic 30.0%
CGAAATAAATATGCTTGGTA+TGG + chr4.1:4648833-4648852 MS.gene06068:CDS 30.0%
CTAAAATTGATCATCGCTAT+TGG - chr4.1:4646194-4646213 None:intergenic 30.0%
CTAATACATAAGCACCTATA+TGG - chr4.1:4645129-4645148 None:intergenic 30.0%
CTTGAACATAAATATTCTCC+AGG - chr4.1:4649220-4649239 None:intergenic 30.0%
GAGTGTAATAATGTTCTCAT+TGG - chr4.1:4647161-4647180 None:intergenic 30.0%
GCAATTATATGAACACACAA+TGG + chr4.1:4647256-4647275 MS.gene06068:intron 30.0%
GCATTATTATTATTGGTGAG+AGG - chr4.1:4648103-4648122 None:intergenic 30.0%
GGAAAAATTGTTCAAAGAGA+TGG - chr4.1:4648082-4648101 None:intergenic 30.0%
GTAGCAATGTATTATTTGGA+AGG + chr4.1:4646516-4646535 MS.gene06068:intron 30.0%
GTATGCAAAACATTATGTCA+CGG - chr4.1:4645607-4645626 None:intergenic 30.0%
GTATGTTCTTTCTCAACATT+TGG + chr4.1:4648667-4648686 MS.gene06068:intron 30.0%
GTGAATCACTAAAACATACA+CGG - chr4.1:4644697-4644716 None:intergenic 30.0%
GTTGCAAATTTGTCATGAAA+AGG + chr4.1:4646859-4646878 MS.gene06068:intron 30.0%
TAATGGCAAAAATGAAAGAG+AGG - chr4.1:4644861-4644880 None:intergenic 30.0%
TAATTCAATAGATGAACCTC+AGG - chr4.1:4646484-4646503 None:intergenic 30.0%
TAGAGTTACGAGAGATTATA+TGG + chr4.1:4645356-4645375 MS.gene06068:intron 30.0%
TATTGAATTAATGATCCGTG+TGG + chr4.1:4646494-4646513 MS.gene06068:intron 30.0%
TCAAGCAAATGATATGAAGA+TGG + chr4.1:4649520-4649539 MS.gene06068:CDS 30.0%
TCATGCATGATCTATTAAAC+AGG + chr4.1:4649095-4649114 MS.gene06068:intron 30.0%
TGAACACCATTTATTCTATG+TGG + chr4.1:4647806-4647825 MS.gene06068:intron 30.0%
TGACTAATCACTCTGATAAT+TGG + chr4.1:4649899-4649918 MS.gene06068:intron 30.0%
TGTGGTAGCAATGTATTATT+TGG + chr4.1:4646512-4646531 MS.gene06068:intron 30.0%
TTAATACAGATTTCTCCTCT+TGG - chr4.1:4648936-4648955 None:intergenic 30.0%
TTACTTAAATGGGAAGATGT+AGG - chr4.1:4647301-4647320 None:intergenic 30.0%
TTATTGAAGAGGGAATCATA+TGG + chr4.1:4647630-4647649 MS.gene06068:CDS 30.0%
TTCGTTTGGTATTGTTACAA+AGG - chr4.1:4648817-4648836 None:intergenic 30.0%
TTGAACATGGAAGAAAAACA+AGG + chr4.1:4646071-4646090 MS.gene06068:intron 30.0%
TTGTTTCAGATATGGATCTA+TGG + chr4.1:4649431-4649450 MS.gene06068:intron 30.0%
TTTGACAGGATTATTGAAGA+GGG + chr4.1:4647620-4647639 MS.gene06068:CDS 30.0%
! AGGTATGCTTCTTTCATTTT+AGG - chr4.1:4646679-4646698 None:intergenic 30.0%
! AGTACAGAGCAATTTTGTTA+CGG - chr4.1:4648501-4648520 None:intergenic 30.0%
! CAAAGGGTTTAGAATACATA+CGG - chr4.1:4649258-4649277 None:intergenic 30.0%
! CAATGTTTGGTTCCATTATT+TGG + chr4.1:4646144-4646163 MS.gene06068:intron 30.0%
! CTTTTTACTCTGTTCTTTGA+AGG + chr4.1:4645925-4645944 MS.gene06068:intron 30.0%
! GGTCTCTTTTTCTTAAATGT+TGG - chr4.1:4649813-4649832 None:intergenic 30.0%
! TTACAAAGAAGTGTATGACT+TGG + chr4.1:4644948-4644967 MS.gene06068:CDS 30.0%
! TTGTGTGCTTTGATTTACAT+AGG - chr4.1:4648278-4648297 None:intergenic 30.0%
! TTTCTATTAGTTCTCAAGGA+TGG - chr4.1:4645219-4645238 None:intergenic 30.0%
!! AATGTACGTATTGTTTTGTC+TGG + chr4.1:4648570-4648589 MS.gene06068:CDS 30.0%
!! AATGTTTTTGCAACATGATC+AGG + chr4.1:4648527-4648546 MS.gene06068:intron 30.0%
!! ATGACTTGGTGATCAAAATT+GGG + chr4.1:4644962-4644981 MS.gene06068:CDS 30.0%
!! CATTTTAGGAAAGGGATTAA+TGG - chr4.1:4646665-4646684 None:intergenic 30.0%
!! GATGAATTTTTAGAAGTGGT+GGG + chr4.1:4646809-4646828 MS.gene06068:intron 30.0%
!! GCTTCTTTCATTTTAGGAAA+GGG - chr4.1:4646673-4646692 None:intergenic 30.0%
!! TATGACTTGGTGATCAAAAT+TGG + chr4.1:4644961-4644980 MS.gene06068:CDS 30.0%
!! TCTATACTTGTTGTTGTACA+TGG + chr4.1:4649061-4649080 MS.gene06068:intron 30.0%
!! TGCTTCTTTCATTTTAGGAA+AGG - chr4.1:4646674-4646693 None:intergenic 30.0%
!!! ATGTCGCTTTTCTTTTTTTC+AGG - chr4.1:4647082-4647101 None:intergenic 30.0%
!!! ATTGTTTTTGAGGGTTATAC+AGG + chr4.1:4644756-4644775 MS.gene06068:intron 30.0%
!!! TTGTTTTAGGGAGTAAAATG+CGG + chr4.1:4645800-4645819 MS.gene06068:intron 30.0%
AAAGATTGCGAAGGAAAAGA+AGG + chr4.1:4649601-4649620 MS.gene06068:CDS 35.0%
AAGAGGTTATGATTGATGGA+TGG + chr4.1:4649003-4649022 MS.gene06068:CDS 35.0%
AAGCAAGAAGTTGAGAAGAT+CGG + chr4.1:4646767-4646786 MS.gene06068:CDS 35.0%
AAGGCGAAACATTACATACT+TGG + chr4.1:4649569-4649588 MS.gene06068:CDS 35.0%
AATCTGTATTAAGGGTGGTA+CGG + chr4.1:4648944-4648963 MS.gene06068:CDS 35.0%
ACAAATTTGCAACAGATAGG+AGG - chr4.1:4646852-4646871 None:intergenic 35.0%
ACACCTTAAGTGCAAATTCA+AGG + chr4.1:4649953-4649972 MS.gene06068:intron 35.0%
ACACGTTACTTACTATGTGT+AGG - chr4.1:4648215-4648234 None:intergenic 35.0%
ACCAAAGAGGTTATGATTGA+TGG + chr4.1:4648999-4649018 MS.gene06068:CDS 35.0%
ACTTCCAAATATGGTAAAGG+AGG - chr4.1:4648864-4648883 None:intergenic 35.0%
ACTTGTGCTCATATCTTACA+AGG + chr4.1:4648639-4648658 MS.gene06068:CDS 35.0%
AGATAAATGCCAAAGAAGGT+GGG - chr4.1:4646340-4646359 None:intergenic 35.0%
AGCATCATAGCTTACCATAT+AGG + chr4.1:4645112-4645131 MS.gene06068:intron 35.0%
AGGTAGATAAATGCCAAAGA+AGG - chr4.1:4646344-4646363 None:intergenic 35.0%
ATATGAACACACAATGGTCA+AGG + chr4.1:4647262-4647281 MS.gene06068:intron 35.0%
ATGTGTGAAAGAGGTAACAA+TGG + chr4.1:4644443-4644462 MS.gene06068:intron 35.0%
ATTGGATATCAATACTCCCT+TGG - chr4.1:4647143-4647162 None:intergenic 35.0%
CAAATGTTAATTTAGGTGCC+GGG + chr4.1:4646395-4646414 MS.gene06068:intron 35.0%
CACACTTCCAAATATGGTAA+AGG - chr4.1:4648867-4648886 None:intergenic 35.0%
CATTCCCATTCACTATTTCA+CGG - chr4.1:4644823-4644842 None:intergenic 35.0%
CCAAATGTTAATTTAGGTGC+CGG + chr4.1:4646394-4646413 MS.gene06068:intron 35.0%
CGGGGTGAAAATATATTTGT+GGG + chr4.1:4646787-4646806 MS.gene06068:CDS 35.0%
CTTGTTGAGAGATCTCTAAT+TGG + chr4.1:4644121-4644140 MS.gene06068:intron 35.0%
CTTTGACAGGATTATTGAAG+AGG + chr4.1:4647619-4647638 MS.gene06068:CDS 35.0%
GAAACAGACGATGTTCAATT+GGG + chr4.1:4648189-4648208 MS.gene06068:CDS 35.0%
GATAATGAAAGTTCCGCTAT+CGG + chr4.1:4647533-4647552 MS.gene06068:intron 35.0%
GATCAGGTAAAACAAGCTTT+AGG + chr4.1:4648543-4648562 MS.gene06068:intron 35.0%
GCAGGATATCAAATTGTTGA+TGG + chr4.1:4647831-4647850 MS.gene06068:intron 35.0%
GCTATTGAAGACATTTCCAA+AGG + chr4.1:4646601-4646620 MS.gene06068:intron 35.0%
GCTCATATCTTACAAGGATA+TGG + chr4.1:4648645-4648664 MS.gene06068:CDS 35.0%
GGACAAACTTGTATTCAGTA+AGG + chr4.1:4648419-4648438 MS.gene06068:CDS 35.0%
GTTCTTATTAGTCACTGAAG+TGG + chr4.1:4648027-4648046 MS.gene06068:intron 35.0%
TACAGCCAAGTAATTCTAGA+AGG - chr4.1:4646887-4646906 None:intergenic 35.0%
TAGATAAATGCCAAAGAAGG+TGG - chr4.1:4646341-4646360 None:intergenic 35.0%
TATCCAACAAATCCAATGCT+GGG + chr4.1:4644794-4644813 MS.gene06068:CDS 35.0%
TATGAACACACAATGGTCAA+GGG + chr4.1:4647263-4647282 MS.gene06068:intron 35.0%
TCCAAACACACTTCCAAATA+TGG - chr4.1:4648873-4648892 None:intergenic 35.0%
TCCATCAATCATAACCTCTT+TGG - chr4.1:4649003-4649022 None:intergenic 35.0%
TCGGGGTGAAAATATATTTG+TGG + chr4.1:4646786-4646805 MS.gene06068:CDS 35.0%
TGAAACAGACGATGTTCAAT+TGG + chr4.1:4648188-4648207 MS.gene06068:CDS 35.0%
TGAAGAAAAGAAGATACCTG+AGG + chr4.1:4646465-4646484 MS.gene06068:CDS 35.0%
TGACACATTGAGAAGTTCAA+TGG - chr4.1:4650025-4650044 None:intergenic 35.0%
TGAGATCTTCATGAATAGCT+TGG + chr4.1:4645695-4645714 MS.gene06068:intron 35.0%
TGTACGATAATGTACACAAG+TGG + chr4.1:4647103-4647122 MS.gene06068:CDS 35.0%
TGTCAAACCTGTATAACAGA+TGG - chr4.1:4648143-4648162 None:intergenic 35.0%
TGTCCTTGAATTTGCACTTA+AGG - chr4.1:4649959-4649978 None:intergenic 35.0%
TGTTTCAGTAAGACCTACAA+AGG - chr4.1:4648784-4648803 None:intergenic 35.0%
TTCGCATAAGTAATTGCAGT+GGG + chr4.1:4644038-4644057 MS.gene06068:intron 35.0%
TTCTCTCTGTGAAGATTCAA+AGG + chr4.1:4649550-4649569 MS.gene06068:CDS 35.0%
TTGAACTAAATAGCGTATCG+TGG + chr4.1:4647419-4647438 MS.gene06068:intron 35.0%
TTGGATATCAATACTCCCTT+GGG - chr4.1:4647142-4647161 None:intergenic 35.0%
! AAATGTTAATTTAGGTGCCG+GGG + chr4.1:4646396-4646415 MS.gene06068:intron 35.0%
! ACCATATTTGGAAGTGTGTT+TGG + chr4.1:4648869-4648888 MS.gene06068:CDS 35.0%
! ATACATGTTGGGATGTTTTC+AGG + chr4.1:4643860-4643879 MS.gene06068:CDS 35.0%
! ATATGTTGCTGTTGAAAACC+TGG + chr4.1:4649199-4649218 MS.gene06068:CDS 35.0%
! ATTTTTGCATAGGCCATGTT+TGG + chr4.1:4645064-4645083 MS.gene06068:intron 35.0%
! TAACTTCCTCTTGTCATTTC+TGG - chr4.1:4646965-4646984 None:intergenic 35.0%
! TCAGGTAAAACAAGCTTTAG+GGG + chr4.1:4648545-4648564 MS.gene06068:intron 35.0%
!! CAAGAAAGCACTTGAAGATT+GGG + chr4.1:4649496-4649515 MS.gene06068:CDS 35.0%
!! GAAGATAAAAGAGCCTTGTT+TGG - chr4.1:4645520-4645539 None:intergenic 35.0%
!! GGATGAATTTTTAGAAGTGG+TGG + chr4.1:4646808-4646827 MS.gene06068:intron 35.0%
!! GTGGGATGAATTTTTAGAAG+TGG + chr4.1:4646805-4646824 MS.gene06068:CDS 35.0%
!! GTTTGTTATATCTCATGCAG+AGG + chr4.1:4646426-4646445 MS.gene06068:CDS 35.0%
!! TCCATTATTTGGTTCTCTCT+TGG + chr4.1:4646155-4646174 MS.gene06068:intron 35.0%
!!! ACATGATTTTTGGCCTTTGT+AGG + chr4.1:4648768-4648787 MS.gene06068:intron 35.0%
AAAGATGGTAGGCCATCTAT+GGG + chr4.1:4643778-4643797 MS.gene06068:CDS 40.0%
AAAGCTAGAGATGCCAAAGA+TGG + chr4.1:4643763-4643782 MS.gene06068:CDS 40.0%
AAGTTGCATAGCATGGAAAG+AGG + chr4.1:4648366-4648385 MS.gene06068:CDS 40.0%
AATTGCAGTGGGTAATGTGA+GGG + chr4.1:4644049-4644068 MS.gene06068:intron 40.0%
ACAGATTTCTCCTCTTGGTT+TGG - chr4.1:4648931-4648950 None:intergenic 40.0%
ACATGTATCGAGACCTTCAA+TGG - chr4.1:4643848-4643867 None:intergenic 40.0%
ACATTACGTAGTGAGAATCC+AGG - chr4.1:4645563-4645582 None:intergenic 40.0%
AGAGCTCTTAAAGATTGCGA+AGG + chr4.1:4649592-4649611 MS.gene06068:CDS 40.0%
AGATCACGTTCCATGTCAAA+TGG - chr4.1:4649783-4649802 None:intergenic 40.0%
AGCAAGAAGTTGAGAAGATC+GGG + chr4.1:4646768-4646787 MS.gene06068:CDS 40.0%
AGTGCATCATATCCCATTTC+AGG - chr4.1:4648903-4648922 None:intergenic 40.0%
AGTTGCATAGCATGGAAAGA+GGG + chr4.1:4648367-4648386 MS.gene06068:CDS 40.0%
ATGTACACAAGTGGAACAAC+CGG + chr4.1:4647112-4647131 MS.gene06068:CDS 40.0%
CAAACCTGTATAACAGATGG+AGG - chr4.1:4648140-4648159 None:intergenic 40.0%
CAATCATAACCTCTTTGGTG+AGG - chr4.1:4648998-4649017 None:intergenic 40.0%
CATAATCCATTCCGGACAAT+TGG - chr4.1:4645837-4645856 None:intergenic 40.0%
CATGAATAGCTTGGTCATGA+AGG + chr4.1:4645704-4645723 MS.gene06068:intron 40.0%
CATGTATCGAGACCTTCAAT+GGG - chr4.1:4643847-4643866 None:intergenic 40.0%
CATTGACGAGATGTACAAGA+CGG + chr4.1:4650153-4650172 MS.gene06068:CDS 40.0%
CATTTATTCTATGTGGCTGC+AGG + chr4.1:4647813-4647832 MS.gene06068:intron 40.0%
CCGGCACCTAAATTAACATT+TGG - chr4.1:4646397-4646416 None:intergenic 40.0%
CTGCAGCCACATAGAATAAA+TGG - chr4.1:4647815-4647834 None:intergenic 40.0%
CTTCAAGTGCTTTCTTGCTT+GGG - chr4.1:4649493-4649512 None:intergenic 40.0%
GCCAAGAGAGAACCAAATAA+TGG - chr4.1:4646159-4646178 None:intergenic 40.0%
GGAACGGCACAAAAAATAGT+TGG - chr4.1:4647877-4647896 None:intergenic 40.0%
GGAGAAATCTGTATTAAGGG+TGG + chr4.1:4648939-4648958 MS.gene06068:CDS 40.0%
GGAGTAAAATGCGGCATTTA+TGG + chr4.1:4645809-4645828 MS.gene06068:CDS 40.0%
GTATCCAACAAATCCAATGC+TGG + chr4.1:4644793-4644812 MS.gene06068:CDS 40.0%
GTCACATGTGCTTATTCTTG+TGG + chr4.1:4645019-4645038 MS.gene06068:intron 40.0%
GTGTGTCTAATGTGTGAAAG+AGG + chr4.1:4644434-4644453 MS.gene06068:intron 40.0%
GTTCGCATAAGTAATTGCAG+TGG + chr4.1:4644037-4644056 MS.gene06068:intron 40.0%
TAATTGCAGTGGGTAATGTG+AGG + chr4.1:4644048-4644067 MS.gene06068:intron 40.0%
TCAACCTCCATCTGTTATAC+AGG + chr4.1:4648133-4648152 MS.gene06068:intron 40.0%
TCACAAACATCACATGGTGT+AGG - chr4.1:4647963-4647982 None:intergenic 40.0%
TCAGCATAAAGCTTCAAGTG+AGG - chr4.1:4649691-4649710 None:intergenic 40.0%
TCCATGCTCATAATCCATTC+CGG - chr4.1:4645845-4645864 None:intergenic 40.0%
TCTTCAAGTGCTTTCTTGCT+TGG - chr4.1:4649494-4649513 None:intergenic 40.0%
TGAAACAGCAGCTCCATTAA+TGG + chr4.1:4648398-4648417 MS.gene06068:CDS 40.0%
TGAAGGTCTCGATACATGTT+GGG + chr4.1:4643849-4643868 MS.gene06068:CDS 40.0%
TGATCCAGTTCCATTTGACA+TGG + chr4.1:4649770-4649789 MS.gene06068:CDS 40.0%
TGGTAGTACTTAAGCAACTG+CGG - chr4.1:4649834-4649853 None:intergenic 40.0%
TGGTTCCATACAGGTTCTTT+CGG + chr4.1:4649023-4649042 MS.gene06068:intron 40.0%
TGTACACTCTATCAAGCACA+CGG - chr4.1:4647900-4647919 None:intergenic 40.0%
TGTGTAGCAATTGTGAGCTT+TGG + chr4.1:4646725-4646744 MS.gene06068:intron 40.0%
TTCAACCGAAAGAACCTGTA+TGG - chr4.1:4649031-4649050 None:intergenic 40.0%
TTGAAGGTCTCGATACATGT+TGG + chr4.1:4643848-4643867 MS.gene06068:CDS 40.0%
TTGGAGTCTGTACCTGAAAT+GGG + chr4.1:4648888-4648907 MS.gene06068:CDS 40.0%
! ATAAAGTCCATGAGCATTGC+AGG - chr4.1:4646285-4646304 None:intergenic 40.0%
! ATCATCGCTATTGGTGACAA+AGG - chr4.1:4646185-4646204 None:intergenic 40.0%
! ATTGATGGATGGTTCCATAC+AGG + chr4.1:4649014-4649033 MS.gene06068:CDS 40.0%
! CATTTATGGTGCCAATTGTC+CGG + chr4.1:4645823-4645842 MS.gene06068:CDS 40.0%
! GTATCGTAGCTGTTTCACTA+AGG + chr4.1:4643807-4643826 MS.gene06068:CDS 40.0%
! TGATTTGTCACTGCAATTCC+TGG + chr4.1:4645542-4645561 MS.gene06068:intron 40.0%
! TGGGAAGATGTAGGCATTTT+AGG - chr4.1:4647292-4647311 None:intergenic 40.0%
! TTTGGAGTCTGTACCTGAAA+TGG + chr4.1:4648887-4648906 MS.gene06068:CDS 40.0%
!! AGGCTCCTTCTAGAATTACT+TGG + chr4.1:4646879-4646898 MS.gene06068:intron 40.0%
!! CAGGTAAAACAAGCTTTAGG+GGG + chr4.1:4648546-4648565 MS.gene06068:intron 40.0%
!! GCAAGAAAGCACTTGAAGAT+TGG + chr4.1:4649495-4649514 MS.gene06068:CDS 40.0%
AAACAGGAGATATCGGAGAG+TGG + chr4.1:4649111-4649130 MS.gene06068:intron 45.0%
AACAAGAGGGACACATGAAG+TGG + chr4.1:4644520-4644539 MS.gene06068:intron 45.0%
ACAAGAGGGACACATGAAGT+GGG + chr4.1:4644521-4644540 MS.gene06068:intron 45.0%
AGCTTGGTCATGAAGGACTA+TGG + chr4.1:4645711-4645730 MS.gene06068:intron 45.0%
AGGTATGATCCCACCTTCTT+TGG + chr4.1:4646328-4646347 MS.gene06068:intron 45.0%
CAAAGATGGTAGGCCATCTA+TGG + chr4.1:4643777-4643796 MS.gene06068:CDS 45.0%
CAAAGATGTGTGCAAGTGGA+AGG - chr4.1:4647604-4647623 None:intergenic 45.0%
CACTTGCACACATCTTTGAC+AGG + chr4.1:4647606-4647625 MS.gene06068:CDS 45.0%
CATAGATGGCCTACCATCTT+TGG - chr4.1:4643779-4643798 None:intergenic 45.0%
CATTCGTGCTTGTGGTTATG+GGG + chr4.1:4644990-4645009 MS.gene06068:CDS 45.0%
CCATTCGTGCTTGTGGTTAT+GGG + chr4.1:4644989-4645008 MS.gene06068:CDS 45.0%
CCTCTATCGAAACATGTCGA+AGG + chr4.1:4648600-4648619 MS.gene06068:CDS 45.0%
CCTTCGACATGTTTCGATAG+AGG - chr4.1:4648603-4648622 None:intergenic 45.0%
CGTTCCATGTCAAATGGAAC+TGG - chr4.1:4649777-4649796 None:intergenic 45.0%
CTAGAGATGCCAAAGATGGT+AGG + chr4.1:4643767-4643786 MS.gene06068:CDS 45.0%
CTCAGTCCAGAAATGACAAG+AGG + chr4.1:4646956-4646975 MS.gene06068:intron 45.0%
CTGTCAAAGATGTGTGCAAG+TGG - chr4.1:4647608-4647627 None:intergenic 45.0%
GAAGAGGGAATCATATGGAG+TGG + chr4.1:4647635-4647654 MS.gene06068:CDS 45.0%
GCAAGAAGTTGAGAAGATCG+GGG + chr4.1:4646769-4646788 MS.gene06068:CDS 45.0%
GCAGTTGCTTAAGTACTACC+AGG + chr4.1:4649833-4649852 MS.gene06068:CDS 45.0%
GCTTGGTCATGAAGGACTAT+GGG + chr4.1:4645712-4645731 MS.gene06068:intron 45.0%
GGGACCTCCTTTACCATATT+TGG + chr4.1:4648857-4648876 MS.gene06068:CDS 45.0%
GGTCTTACTGAAACATGTGC+TGG + chr4.1:4648789-4648808 MS.gene06068:intron 45.0%
GTACACTCTATCAAGCACAC+GGG - chr4.1:4647899-4647918 None:intergenic 45.0%
GTCGCCGTGAAATAGTGAAT+GGG + chr4.1:4644816-4644835 MS.gene06068:CDS 45.0%
GTGAAACAGCTACGATACAC+AGG - chr4.1:4643805-4643824 None:intergenic 45.0%
GTGCTTGATAGAGTGTACAC+AGG + chr4.1:4647901-4647920 MS.gene06068:CDS 45.0%
GTTTGTTCGAATCAAGACGG+TGG - chr4.1:4648473-4648492 None:intergenic 45.0%
TACACTCTATCAAGCACACG+GGG - chr4.1:4647898-4647917 None:intergenic 45.0%
TATAACAAACTCCACAGCCC+CGG - chr4.1:4646416-4646435 None:intergenic 45.0%
TCCATTCGTGCTTGTGGTTA+TGG + chr4.1:4644988-4645007 MS.gene06068:CDS 45.0%
TGTAGCCTGGCAAATTCAAG+TGG + chr4.1:4644920-4644939 MS.gene06068:intron 45.0%
TTGAGATACTCTGCTGCCTT+TGG - chr4.1:4646620-4646639 None:intergenic 45.0%
TTGCAGCAAGTTGCATAGCA+TGG + chr4.1:4648359-4648378 MS.gene06068:intron 45.0%
TTGGGTTAACAACAGCGACA+AGG - chr4.1:4649475-4649494 None:intergenic 45.0%
TTGTCAAACAGCGGATGTAG+CGG - chr4.1:4647395-4647414 None:intergenic 45.0%
! GTATCGATATCGTGTCGTGT+CGG - chr4.1:4644620-4644639 None:intergenic 45.0%
! GTTTGCCACTTGAATTTGCC+AGG - chr4.1:4644928-4644947 None:intergenic 45.0%
! TCGCTATTGGTGACAAAGGA+TGG - chr4.1:4646181-4646200 None:intergenic 45.0%
! TCTGGGATGAAGCAGATACT+AGG + chr4.1:4647184-4647203 MS.gene06068:CDS 45.0%
!! ATATGGAGTGGTGCTGCAAT+AGG + chr4.1:4647647-4647666 MS.gene06068:CDS 45.0%
!! CACATGAAGTGGGTTATGGT+TGG + chr4.1:4644531-4644550 MS.gene06068:intron 45.0%
!! GGAATGGATTATGAGCATGG+AGG + chr4.1:4645844-4645863 MS.gene06068:CDS 45.0%
!! TCCGGAATGGATTATGAGCA+TGG + chr4.1:4645841-4645860 MS.gene06068:CDS 45.0%
!! ATAAATAATTAAACAAATAA+AGG - chr4.1:4646699-4646718 None:intergenic 5.0%
!! TAGATAAATAAATAAATAAA+AGG - chr4.1:4650066-4650085 None:intergenic 5.0%
ACGTGAAGACCTCACCAAAG+AGG + chr4.1:4648986-4649005 MS.gene06068:CDS 50.0%
AGCAGCACACGATGATGTTG+CGG - chr4.1:4647468-4647487 None:intergenic 50.0%
ATCGGAGAGTGGCAACCTAA+TGG + chr4.1:4649122-4649141 MS.gene06068:CDS 50.0%
ATCTCTCCTCCTCCCATTGA+AGG + chr4.1:4643832-4643851 MS.gene06068:CDS 50.0%
CAAGCAGAGACAACCGATAG+CGG - chr4.1:4647549-4647568 None:intergenic 50.0%
CAATACTCCCTTGGGATCAC+CGG - chr4.1:4647134-4647153 None:intergenic 50.0%
CCCATAACCACAAGCACGAA+TGG - chr4.1:4644992-4645011 None:intergenic 50.0%
CGATACACAGGACCCATAGA+TGG - chr4.1:4643793-4643812 None:intergenic 50.0%
CTAGCTTAGTCTGGCCGTTT+AGG - chr4.1:4645387-4645406 None:intergenic 50.0%
GCACTTGCAACCAAACCAAG+AGG + chr4.1:4648918-4648937 MS.gene06068:CDS 50.0%
GGTCGCCGTGAAATAGTGAA+TGG + chr4.1:4644815-4644834 MS.gene06068:CDS 50.0%
GTATCGAGACCTTCAATGGG+AGG - chr4.1:4643844-4643863 None:intergenic 50.0%
TCTATCAAGCACACGGGGAA+CGG - chr4.1:4647893-4647912 None:intergenic 50.0%
TGTGTCACACTCTTGTAGCC+TGG + chr4.1:4644907-4644926 MS.gene06068:intron 50.0%
TTTCAGGCCTGCAATGCTCA+TGG + chr4.1:4646275-4646294 MS.gene06068:intron 50.0%
! ATGGTGCCAATTGTCCGGAA+TGG + chr4.1:4645828-4645847 MS.gene06068:CDS 50.0%
! CGACCCAGCATTGGATTTGT+TGG - chr4.1:4644800-4644819 None:intergenic 50.0%
!! CTGCAATAGGTTTCTGGCGA+GGG + chr4.1:4647660-4647679 MS.gene06068:CDS 50.0%
!! GGGACACATGAAGTGGGTTA+TGG + chr4.1:4644527-4644546 MS.gene06068:intron 50.0%
!! GTGGTGCTGCAATAGGTTTC+TGG + chr4.1:4647654-4647673 MS.gene06068:CDS 50.0%
!! TGCAATAGGTTTCTGGCGAG+GGG + chr4.1:4647661-4647680 MS.gene06068:CDS 50.0%
ATTTCACGGCGACCCAGCAT+TGG - chr4.1:4644809-4644828 None:intergenic 55.0%
GAGCACAAGTCACAACACGC+AGG - chr4.1:4648629-4648648 None:intergenic 55.0%
GGAACAACCGGTGATCCCAA+GGG + chr4.1:4647124-4647143 MS.gene06068:CDS 55.0%
GGGAAGTCCATTCGTGCTTG+TGG + chr4.1:4644982-4645001 MS.gene06068:CDS 55.0%
TCGAGACCTTCAATGGGAGG+AGG - chr4.1:4643841-4643860 None:intergenic 55.0%
TGGAACAACCGGTGATCCCA+AGG + chr4.1:4647123-4647142 MS.gene06068:CDS 55.0%
! AAGGGTGGTACGGTTTTCGC+AGG + chr4.1:4648954-4648973 MS.gene06068:CDS 55.0%
! AGGGTGGTACGGTTTTCGCA+GGG + chr4.1:4648955-4648974 MS.gene06068:CDS 55.0%
! GATATCGTGTCGTGTCGGCA+AGG - chr4.1:4644615-4644634 None:intergenic 55.0%
!! GCTGCAATAGGTTTCTGGCG+AGG + chr4.1:4647659-4647678 MS.gene06068:CDS 55.0%
!! TAATTTAGGTGCCGGGGCTG+TGG + chr4.1:4646402-4646421 MS.gene06068:intron 55.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 4643727 4650183 4643727 ID=MS.gene06068
chr4.1 mRNA 4643727 4650183 4643727 ID=MS.gene06068.t1;Parent=MS.gene06068
chr4.1 exon 4643727 4643881 4643727 ID=MS.gene06068.t1.exon1;Parent=MS.gene06068.t1
chr4.1 CDS 4643727 4643881 4643727 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4644778 4644841 4644778 ID=MS.gene06068.t1.exon2;Parent=MS.gene06068.t1
chr4.1 CDS 4644778 4644841 4644778 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4644925 4645014 4644925 ID=MS.gene06068.t1.exon3;Parent=MS.gene06068.t1
chr4.1 CDS 4644925 4645014 4644925 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4645809 4645865 4645809 ID=MS.gene06068.t1.exon4;Parent=MS.gene06068.t1
chr4.1 CDS 4645809 4645865 4645809 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4646281 4646329 4646281 ID=MS.gene06068.t1.exon5;Parent=MS.gene06068.t1
chr4.1 CDS 4646281 4646329 4646281 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4646410 4646486 4646410 ID=MS.gene06068.t1.exon6;Parent=MS.gene06068.t1
chr4.1 CDS 4646410 4646486 4646410 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4646602 4646641 4646602 ID=MS.gene06068.t1.exon7;Parent=MS.gene06068.t1
chr4.1 CDS 4646602 4646641 4646602 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4646732 4646826 4646732 ID=MS.gene06068.t1.exon8;Parent=MS.gene06068.t1
chr4.1 CDS 4646732 4646826 4646732 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4647055 4647222 4647055 ID=MS.gene06068.t1.exon9;Parent=MS.gene06068.t1
chr4.1 CDS 4647055 4647222 4647055 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4647572 4647682 4647572 ID=MS.gene06068.t1.exon10;Parent=MS.gene06068.t1
chr4.1 CDS 4647572 4647682 4647572 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4647835 4647922 4647835 ID=MS.gene06068.t1.exon11;Parent=MS.gene06068.t1
chr4.1 CDS 4647835 4647922 4647835 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4648155 4648221 4648155 ID=MS.gene06068.t1.exon12;Parent=MS.gene06068.t1
chr4.1 CDS 4648155 4648221 4648155 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4648365 4648440 4648365 ID=MS.gene06068.t1.exon13;Parent=MS.gene06068.t1
chr4.1 CDS 4648365 4648440 4648365 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4648549 4648666 4648549 ID=MS.gene06068.t1.exon14;Parent=MS.gene06068.t1
chr4.1 CDS 4648549 4648666 4648549 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4648790 4649035 4648790 ID=MS.gene06068.t1.exon15;Parent=MS.gene06068.t1
chr4.1 CDS 4648790 4649035 4648790 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4649117 4649256 4649117 ID=MS.gene06068.t1.exon16;Parent=MS.gene06068.t1
chr4.1 CDS 4649117 4649256 4649117 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4649440 4649622 4649440 ID=MS.gene06068.t1.exon17;Parent=MS.gene06068.t1
chr4.1 CDS 4649440 4649622 4649440 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4649735 4649854 4649735 ID=MS.gene06068.t1.exon18;Parent=MS.gene06068.t1
chr4.1 CDS 4649735 4649854 4649735 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
chr4.1 exon 4650148 4650183 4650148 ID=MS.gene06068.t1.exon19;Parent=MS.gene06068.t1
chr4.1 CDS 4650148 4650183 4650148 ID=cds.MS.gene06068.t1;Parent=MS.gene06068.t1
Gene Sequence

>MS.gene06068

ATGGCTGAAGATAAATCATTCATCGTTGAGGTTGAGAAAGCTAGAGATGCCAAAGATGGTAGGCCATCTATGGGTCCTGTGTATCGTAGCTGTTTCACTAAGGATATCTCTCCTCCTCCCATTGAAGGTCTCGATACATGTTGGGATGTTTTCAGGTCACTTTCATTTCATTCTCATATATATTTTCATAGATCACAATATTATTTTCATTTCTACTTGTCACAACATCTAAAATGTCTATGTCTATCATTTCTTCACGTGTTAATTTGGCACGATTTGATTGAATGAATTTGCATGGTTTTAAATTGTGGTTCGCATAAGTAATTGCAGTGGGTAATGTGAGGGTTTTTGTTTTGTGTAAGCATTGTCAAAGTAGAAGAACAATGAGATTGAACTTGTTGAGAGATCTCTAATTGGATCTCCTTTGAAAAATAAATCTCTTGAAAACAAGTCATACTTTCTAGCTCTATAAATTTCGAATTAAGATTACTTTGATAGGAAGATATATTGTAGATTTCATCTAAAAGTTATAGAAAACATGTAACTAGACACAATTAAAAATACATATAAAATCCATGTAAAACATAAATTTAAAATGAGAACTAATATTTTAAAAGTTGAGTGAGTGTAAAGATAATATATAATATTGTCATTTATGTATTAGAATAGGAATAAATAATCTAAACAATGGTAAAATACAACTAAAAGTGTGTCTAATGTGTGAAAGAGGTAACAATGGTTAGAGTTGATATACTTTTTGGAAAAAAAACAGAATGAGAAAAAATGTACATACAACAAGAGGGACACATGAAGTGGGTTATGGTTGGCTTTTTTACTATATTTCATCTATGTAACACCGATATTTCGATCTAATCGAAAGTGTGTCCTTGCCGACACGACACGATATCGATACATGCAGATACATTCAATTTTTTTCTCTTCAAATTATTACAAGTAAATGTCGTGTCCGTGTATGTTTTAGTGATTCACAGTATTTCGTAAGAGATTTAACAAATTAATTTAGTTCTGATTGTTTTTGAGGGTTATACAGGACTGCTGTTGAGAAGTATCCAACAAATCCAATGCTGGGTCGCCGTGAAATAGTGAATGGGAATGTGAACACTCTTTTTCCCTCTCTTTCATTTTTGCCATTATGCAAATTTATTGTTACTTTTTGAATTGTGTCACACTCTTGTAGCCTGGCAAATTCAAGTGGCAAACTTACAAAGAAGTGTATGACTTGGTGATCAAAATTGGGAAGTCCATTCGTGCTTGTGGTTATGGGGAAGTAAGTCACATGTGCTTATTCTTGTGGATTGCTTTCACCTTTTCTGATTATTTTTGCATAGGCCATGTTTGGATAAACAGTTTAATAAAGTGTTTATAGCATCATAGCTTACCATATAGGTGCTTATGTATTAGCAATTTCGAAAACAAAAAATACTATAAAGTCAAACTGCTATCATGAGTTATAAGCTGTTTTCATGTGCCATCCTTGAGAACTAATAGAAATAATCGGGAATCAGCTTATAGACATGTCATTGTTATCAATGTAGGTTCAGAGAGAATAACAAAACAAAGGCGGCTGCTAGAGTTTCATAAAATATCATATGGCATAGCATATAAAAATAGAGTTACGAGAGATTATATGGCAAAACCTAAACGGCCAGACTAAGCTAGAAATATAAAGACCCGATAACTTAAGTCAAATATTTTATTATCTAACAATCATAAGTTGTTATAAACTCTCACAAGTGTTTATGTCACTAGATCAGTTGAAATAAATCAATCCAAACAAGGCTCTTTTATCTTCTTTGATTTGTCACTGCAATTCCTGGATTCTCACTACGTAATGTGTTGCTCACTTCTTCTGTTATCCGTGACATAATGTTTTGCATACCAAAAACTAATTCAAAATTCTCTTTATTTCTTTCTCTTTTACAATTATATATTCTTGCTCTTACACTTTGAGATCTTCATGAATAGCTTGGTCATGAAGGACTATGGGATCTTTTGCCTCATATTAGTATCTTTTCTTGTATTGTGTGTATGCAAGCTAAATATATATATTGCTTGTTTTAGGGAGTAAAATGCGGCATTTATGGTGCCAATTGTCCGGAATGGATTATGAGCATGGAGGTACATTTTATTTTGAACTTATTTATTTATTCATGTTATCTTCTATGCATATGATTTTTCTTTTTACTCTGTTCTTTGAAGGTTTCAGTTGTAGTTATACGTTGATATTTGCTTGTACCTTTGTGTTGTATATTTATCAGTTTTTTAATATATTGTTAATGCAATAATGTGATTGTTCTAGTCTGTTTATGAATTATGATCCATTTTGAACATGGAAGAAAAACAAGGCTTTTTTTAAATTGAAACTTTGTTTCATCTATTGAATATTTGTTCTTATACAATGTTTGGTTCCATTATTTGGTTCTCTCTTGGCCATCCTTTGTCACCAATAGCGATGATCAATTTTAGTGTTGCTAAGCTAGTTTCTGTTATCCTTTTAACTTAACATGTCTTACATATTTTAAGATAATTTCAGGCCTGCAATGCTCATGGACTTTATTGTGTTCCTTTATATGATACTTTAGGTATGATCCCACCTTCTTTGGCATTTATCTACCTATATTATGTTACCACTTTAATATTTATTTTCCAAATGTTAATTTAGGTGCCGGGGCTGTGGAGTTTGTTATATCTCATGCAGAGGTCTCAATAGCATTTGTTGAAGAAAAGAAGATACCTGAGGTTCATCTATTGAATTAATGATCCGTGTGGTAGCAATGTATTATTTGGAAGGATTAGAAAGTGTGATCTGCAATTTTCTATAACTAAGTCATATATTTTTTCTGAAACTTTTCAGCTATTGAAGACATTTCCAAAGGCAGCAGAGTATCTCAAGAGTAAGTTTCATTGATTTTCTCCATTAATCCCTTTCCTAAAATGAAAGAAGCATACCTTTATTTGTTTAATTATTTATCTATTTTGTGTAGCAATTGTGAGCTTTGGAAAAGTTTCTGCAGAACAAAAGCAAGAAGTTGAGAAGATCGGGGTGAAAATATATTTGTGGGATGAATTTTTAGAAGTGGTGGGTTATTATTACTCTTTTTCCTCCTATCTGTTGCAAATTTGTCATGAAAAGGCTCCTTCTAGAATTACTTGGCTGTATCACAAAATATTAGATACACTTCTTGAATTGCAAGTTTTGTTTCTAACACTCAGTCCAGAAATGACAAGAGGAAGTTACGTGTTACAATTGTTTTATCGATATTTTGTGGTTGGATTGCTGATTCGAGTTTTTTAATGTATGTCACAGGGTCATGATAAGAATTTTGATCTTCCTGAAAAAAAGAAAAGCGACATATGTACGATAATGTACACAAGTGGAACAACCGGTGATCCCAAGGGAGTATTGATATCCAATGAGAACATTATTACACTCTTATCTGGGATGAAGCAGATACTAGGTAGTTGCAATGAACAAGTAAGTAGTTTTCTATTAACACATATTTTTCTTGCAATTATATGAACACACAATGGTCAAGGGACTCCTAAAATGCCTACATCTTCCCATTTAAGTAAAAGCATTTTGGTCTTCTAATATGAATCTTAAGCAGTTTGATCAAATACTGCTGCACAACAATGATATAGCGCCGCTACATCCGCTGTTTGACAATATTTTGAACTAAATAGCGTATCGTGGAACAATAACAATTTATTCAAATTCCGCAACATCATCGTGTGCTGCTATTCAACAAAGCTAAATTGCTCCTAAAATGCTATTTCATTTTTTGGATAATGAAAGTTCCGCTATCGGTTGTCTCTGCTTGCAGTTGCATCAGAAAGATGTATACATATCATACCTTCCACTTGCACACATCTTTGACAGGATTATTGAAGAGGGAATCATATGGAGTGGTGCTGCAATAGGTTTCTGGCGAGGGGTGAGTATAGATATATACGTGATAAATCTTTCATTACTGAATGAAGGCTTGATGTGATTATAGTATATTGGATTTTCTTAAATTTAATATCAAGTAAGTCAAAATTTGTATTTGATATTAATATGAACACCATTTATTCTATGTGGCTGCAGGATATCAAATTGTTGATGGAAGACATTGCTGAGTTAAAACCAACTATTTTTTGTGCCGTTCCCCGTGTGCTTGATAGAGTGTACACAGGTAATTTTTTGTCGTTGCTTACAGTTTAGTCATCTTTCCTACACCATGTGATGTTTGTGAAAAAATTATAATTTCATAAAGAACAAAACTATACTTTTAAGATAGTTCTTATTAGTCACTGAAGTGGTCTTTTTATTGAATTCCTTATTCTAATTTCCATCTCTTTGAACAATTTTTCCTCTCACCAATAATAATAATGCAATGAAAATCTCAACCTCCATCTGTTATACAGGTTTGACAGAAAAGATTAATAATGGGGGCTTTGTGAAACAGACGATGTTCAATTGGGCCTACACATAGTAAGTAACGTGTTTTAAATGATGGAAATATGACTAATTATTGTATGAGTGTTCCTATGTAAATCAAAGCACACAAAATCTCATTTAGAAGATGATAATGCATTTCAATGTTCTGATAATATAAACTATGAAATATGTTGCAGCAAGTTGCATAGCATGGAAAGAGGGCAAAAACATGAAACAGCAGCTCCATTAATGGACAAACTTGTATTCAGTAAGGTGATTGTAGTTTCACATATTTTAATTCGCCACCGTCTTGATTCGAACAAACAATAACCGTAACAAAATTGCTCTGTACTAATAATAATGTTTTTGCAACATGATCAGGTAAAACAAGCTTTAGGGGGTAATGTACGTATTGTTTTGTCTGGAGCTGCGCCTCTATCGAAACATGTCGAAGGTTTCCTGCGTGTTGTGACTTGTGCTCATATCTTACAAGGATATGGTATGTTCTTTCTCAACATTTGGACTATCATGAACTTCTGTTACATTTATGTCTGTGATTATTGATGTATTAAATCAGCAAAAGATTCTTTTTAAACATGGACATGATTTTTGGCCTTTGTAGGTCTTACTGAAACATGTGCTGGATCCTTTGTAACAATACCAAACGAAATAAATATGCTTGGTATGGTGGGACCTCCTTTACCATATTTGGAAGTGTGTTTGGAGTCTGTACCTGAAATGGGATATGATGCACTTGCAACCAAACCAAGAGGAGAAATCTGTATTAAGGGTGGTACGGTTTTCGCAGGGTATCACAAACGTGAAGACCTCACCAAAGAGGTTATGATTGATGGATGGTTCCATACAGGTTCTTTCGGTTGAACTTTAGATAATCTATACTTGTTGTTGTACATGGTCACATTTTATTCATGCATGATCTATTAAACAGGAGATATCGGAGAGTGGCAACCTAATGGAAGCATGAAAATTATCGATCGAAAGAAGAATATATTTAAGCTTTCACAAGGAGAATATGTTGCTGTTGAAAACCTGGAGAATATTTATGTTCAAGTTAATGCTATTGAATCCGTATGTATTCTAAACCCTTTGAATAGTTTAGAAGTACTATTTTGCAATGAATTTGTTTTCCTTTAAAGGAGTTAAGAAAATATGTGGAGTAATGATATTAAAAGGTTTAGTTTCAGCTTCTTTTCATTAGTAGACAATGTTTTGTGACATGTTTATATTGTGTTTTATCTTTCTTTGTTTCAGATATGGATCTATGGAAACAGTTTTGAGCACTTCCTTGTCGCTGTTGTTAACCCAAGCAAGAAAGCACTTGAAGATTGGGCTCAAGCAAATGATATGAAGATGGACTTTAATTCTCTCTGTGAAGATTCAAAGGCGAAACATTACATACTTGGAGAGCTCTTAAAGATTGCGAAGGAAAAGAAGGTTCTATTTAGCTAATGTCTCATAATATTTCTCTAATTTGTTATAATTTGATGAATTTGAGAACACCTCACTTGAAGCTTTATGCTGATCATGATTTTTGTTCTTTTTGTAGTTGAAAGGTTTTGAGTTTGTTAAAGTTGTTCATCTTGATCCAGTTCCATTTGACATGGAACGTGATCTTCTCACACCAACATTTAAGAAAAAGAGACCGCAGTTGCTTAAGTACTACCAGGTATAACTTGTTAAAATTTTGGATTATGTTATGTTTCACTAAGTTGACTAATCACTCTGATAATTGGACATTTGAACTATAACTGAATGTCAGAATTGACACCTTAAGTGCAAATTCAAGGACATAAGTACAGTTTATAAAGTTTGCCCCATAATATCTTTCTAATTCCATTGAACTTCTCAATGTGTCAAACCAATTTTCTTTTGCTCCTTTTATTTATTTATTTATCTATTTATTGTACAAACTTAAGCACATACTTGTTTCAGTACTGATTGTAATATTTTTGTGCACAGAATATCATTGACGAGATGTACAAGACGGCCAAATAA
Protein sequence

>MS.gene06068.t1

MAEDKSFIVEVEKARDAKDGRPSMGPVYRSCFTKDISPPPIEGLDTCWDVFRTAVEKYPTNPMLGRREIVNGNPGKFKWQTYKEVYDLVIKIGKSIRACGYGEGVKCGIYGANCPEWIMSMEACNAHGLYCVPLYDTLGAGAVEFVISHAEVSIAFVEEKKIPELLKTFPKAAEYLKTIVSFGKVSAEQKQEVEKIGVKIYLWDEFLEVGHDKNFDLPEKKKSDICTIMYTSGTTGDPKGVLISNENIITLLSGMKQILGSCNEQLHQKDVYISYLPLAHIFDRIIEEGIIWSGAAIGFWRGDIKLLMEDIAELKPTIFCAVPRVLDRVYTGLTEKINNGGFVKQTMFNWAYTYKLHSMERGQKHETAAPLMDKLVFSKVKQALGGNVRIVLSGAAPLSKHVEGFLRVVTCAHILQGYGLTETCAGSFVTIPNEINMLGMVGPPLPYLEVCLESVPEMGYDALATKPRGEICIKGGTVFAGYHKREDLTKEVMIDGWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYVQVNAIESIWIYGNSFEHFLVAVVNPSKKALEDWAQANDMKMDFNSLCEDSKAKHYILGELLKIAKEKKLKGFEFVKVVHLDPVPFDMERDLLTPTFKKKRPQLLKYYQNIIDEMYKTAK