AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene017078

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017078.t1 MTR_5g091135 100.000 178 0 0 1 178 1 178 3.78e-133 370
MS.gene017078.t1 MTR_5g091120 100.000 178 0 0 1 178 1 178 3.78e-133 370
MS.gene017078.t1 MTR_2g098000 100.000 178 0 0 1 178 1 178 3.78e-133 370
MS.gene017078.t1 MTR_3g046320 94.382 178 10 0 1 178 1 178 3.26e-125 350
MS.gene017078.t1 MTR_3g046320 95.402 174 8 0 5 178 3 176 3.08e-124 347
MS.gene017078.t1 MTR_2g019720 62.353 85 32 0 92 176 1 85 1.04e-33 116
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene017078.t1 AT2G34480 90.230 174 17 0 5 178 5 178 2.89e-119 335
MS.gene017078.t1 AT2G34480 90.230 174 17 0 5 178 44 217 3.11e-119 336
MS.gene017078.t1 AT1G29965 87.079 178 23 0 1 178 1 178 1.19e-117 330
MS.gene017078.t1 AT3G14600 87.079 178 23 0 1 178 1 178 4.03e-117 329
MS.gene017078.t1 AT1G29970 89.017 173 19 0 6 178 140 312 1.03e-114 328

Find 47 sgRNAs with CRISPR-Local

Find 140 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATAAACAGGTTTGGCTTCT+TGG 0.139462 5.1:-72599129 None:intergenic
ATTAGAAACTTACCAGAATT+TGG 0.167108 5.1:-72597197 None:intergenic
CACCAGAGGGAACTTGATTT+TGG 0.187302 5.1:-72599057 None:intergenic
AGATTAAGAACTATGGAATT+TGG 0.243479 5.1:+72598835 MS.gene017078:CDS
GAAAAGTAATGGACAAGTTT+TGG 0.246012 5.1:+72597347 MS.gene017078:CDS
GTTTGGCTTCTTGGCTTTGT+AGG 0.246112 5.1:-72599120 None:intergenic
AGATTTATCGCATGAAGCTT+TGG 0.341025 5.1:+72597149 MS.gene017078:CDS
AACTTACCAGAATTTGGATT+TGG 0.348831 5.1:-72597191 None:intergenic
ACGAGATGGCATCTCGTCAT+AGG 0.358917 5.1:+72598946 MS.gene017078:CDS
CCTACCAAGATTAAGAACTA+TGG 0.366976 5.1:+72598828 MS.gene017078:CDS
GATTTATCGCATGAAGCTTT+GGG 0.367321 5.1:+72597150 MS.gene017078:CDS
ATTCACTGAATCACATAAAC+AGG 0.373443 5.1:-72599142 None:intergenic
TTCGTGCCAAATCCAAATTC+TGG 0.381119 5.1:+72597185 MS.gene017078:CDS
AAGCTTCATGCGATAAATCT+TGG 0.383045 5.1:-72597146 None:intergenic
TCCCAGCTAATCTGTGCAAA+AGG 0.391912 5.1:+72599009 MS.gene017078:CDS
CTGAATCACATAAACAGGTT+TGG 0.397820 5.1:-72599137 None:intergenic
AATTCCATAGTTCTTAATCT+TGG 0.403701 5.1:-72598832 None:intergenic
TACCGTGATACTACTCTAAA+CGG 0.441043 5.1:+72598903 MS.gene017078:CDS
GGATTTGGCACGAACCTCAT+TGG 0.442665 5.1:-72597176 None:intergenic
AGTCTTAATGATTTGAATGC+AGG 0.447032 5.1:-72598979 None:intergenic
CTCTGGTGTACAAGAAGATT+AGG 0.461451 5.1:+72599072 MS.gene017078:CDS
AGCTTCATGCGATAAATCTT+GGG 0.476384 5.1:-72597145 None:intergenic
CTCTTCCAACAACCTGGTAC+TGG 0.489846 5.1:-72597096 None:intergenic
TTTCTTGAGGAAGTTGAAGA+AGG 0.490067 5.1:+72597320 MS.gene017078:CDS
TGGCATCTCGTCATAGGGTC+AGG 0.497058 5.1:+72598952 MS.gene017078:CDS
TTTCACCAGTACCAGGTTGT+TGG 0.499494 5.1:+72597091 MS.gene017078:CDS
TTGCGTTATCAGAGTCGTAC+TGG 0.505845 5.1:+72598858 MS.gene017078:CDS
AAGAAGGTTAAGAAAAGTAA+TGG 0.518066 5.1:+72597336 MS.gene017078:CDS
TTTGCACAGATTAGCTGGGA+TGG 0.520373 5.1:-72599006 None:intergenic
CCCAGCTAATCTGTGCAAAA+GGG 0.524734 5.1:+72599010 MS.gene017078:CDS
AAGAGCACTTCCCACCGAAA+AGG 0.541834 5.1:+72597114 MS.gene017078:CDS
CGAGATGGCATCTCGTCATA+GGG 0.544710 5.1:+72598947 MS.gene017078:CDS
CCATAGTTCTTAATCTTGGT+AGG 0.548600 5.1:-72598828 None:intergenic
GAAACAGTTTCACCAGTACC+AGG 0.549157 5.1:+72597084 MS.gene017078:intron
TTCCAAAATCAAGTTCCCTC+TGG 0.549470 5.1:+72599055 MS.gene017078:CDS
GTCTTAATGATTTGAATGCA+GGG 0.566014 5.1:-72598978 None:intergenic
AGAAGATTAGGCCACCAACT+AGG 0.603627 5.1:+72599084 MS.gene017078:CDS
GCACAGATTAGCTGGGATGG+TGG 0.612537 5.1:-72599003 None:intergenic
TGGTTATCACAATATGTACA+AGG 0.613559 5.1:+72598878 MS.gene017078:CDS
GAAGTGCTCTTCCAACAACC+TGG 0.619307 5.1:-72597102 None:intergenic
GAAGCTTTGGGCAACCAATG+AGG 0.630309 5.1:+72597162 MS.gene017078:CDS
CTAATCTTCTTGTACACCAG+AGG 0.631597 5.1:-72599071 None:intergenic
TAATCTTCTTGTACACCAGA+GGG 0.642722 5.1:-72599070 None:intergenic
ATTGTTGTAGGTATTTCTTG+AGG 0.651477 5.1:+72597307 MS.gene017078:intron
GGAGACAATGTACAACGAGA+TGG 0.663821 5.1:+72598932 MS.gene017078:CDS
CGCCGTTTAGAGTAGTATCA+CGG 0.671590 5.1:-72598905 None:intergenic
TACTACTCTAAACGGCGCTG+TGG 0.679213 5.1:+72598911 MS.gene017078:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAATACAATAAAAAAA+AGG - chr5.1:72598650-72598669 None:intergenic 10.0%
!! ACAAAATACAATAAAAAAAA+GGG - chr5.1:72598649-72598668 None:intergenic 10.0%
!!! TTAATTGAAATTTTATAGAA+GGG + chr5.1:72597407-72597426 MS.gene017078:intron 10.0%
!! AAGCAACAAATAAAAAAAAA+TGG - chr5.1:72598307-72598326 None:intergenic 15.0%
!! CAAAATACAATAAAAAAAAG+GGG - chr5.1:72598648-72598667 None:intergenic 15.0%
!! GAATAGAAAAAATTAATGAT+AGG + chr5.1:72597717-72597736 MS.gene017078:intron 15.0%
!! TCTATAAAATTTCAATTAAC+AGG - chr5.1:72597406-72597425 None:intergenic 15.0%
!! TTAATAATGTTAATTGTTGT+AGG + chr5.1:72597295-72597314 MS.gene017078:intron 15.0%
!!! GTTAATTGAAATTTTATAGA+AGG + chr5.1:72597406-72597425 MS.gene017078:intron 15.0%
!!! TCAAATTGATTTTAAATAGA+TGG + chr5.1:72598361-72598380 MS.gene017078:intron 15.0%
!! AGTCACAATATACAATTTAA+AGG - chr5.1:72598597-72598616 None:intergenic 20.0%
!! ATATTAGTATATTGTACAGT+TGG + chr5.1:72597788-72597807 MS.gene017078:intron 20.0%
!!! ATTTTAAATAGATGGTACTT+TGG + chr5.1:72598369-72598388 MS.gene017078:intron 20.0%
!!! TTTGTAGAGCTTTTTTTTTT+AGG + chr5.1:72597526-72597545 MS.gene017078:intron 20.0%
!!! TTTTTTTTTTAGGTAAAGCA+AGG + chr5.1:72597536-72597555 MS.gene017078:intron 20.0%
! AAGAAGGTTAAGAAAAGTAA+TGG + chr5.1:72597336-72597355 MS.gene017078:CDS 25.0%
! AATTCCATAGTTCTTAATCT+TGG - chr5.1:72598835-72598854 None:intergenic 25.0%
! AGATTAAGAACTATGGAATT+TGG + chr5.1:72598835-72598854 MS.gene017078:CDS 25.0%
! ATTAGAAACTTACCAGAATT+TGG - chr5.1:72597200-72597219 None:intergenic 25.0%
! CAAAATAAAATCAGCTCAAA+AGG - chr5.1:72597032-72597051 None:intergenic 25.0%
! GTCAATAAAAACAAATAAGC+TGG - chr5.1:72597484-72597503 None:intergenic 25.0%
! GTTAAGCTAGATTTATACTT+AGG + chr5.1:72597435-72597454 MS.gene017078:intron 25.0%
! TGAGAAAATTAAGTTTGATG+CGG + chr5.1:72598277-72598296 MS.gene017078:intron 25.0%
! TTATGTTGAAATCCAAACAT+AGG + chr5.1:72598533-72598552 MS.gene017078:intron 25.0%
!! ATGTAATATCTGTCAGTTTT+TGG + chr5.1:72598029-72598048 MS.gene017078:intron 25.0%
!! CTATTTCTCTCATAAATAGA+GGG + chr5.1:72597939-72597958 MS.gene017078:intron 25.0%
!! TCTATTTCTCTCATAAATAG+AGG + chr5.1:72597938-72597957 MS.gene017078:intron 25.0%
!! TGCATGTAAAAGCTTTTATT+TGG + chr5.1:72597621-72597640 MS.gene017078:intron 25.0%
AAATGATGTATTGCCATAAC+TGG - chr5.1:72598562-72598581 None:intergenic 30.0%
AACTTACCAGAATTTGGATT+TGG - chr5.1:72597194-72597213 None:intergenic 30.0%
AATAAAATCAGCTCAAAAGG+TGG - chr5.1:72597029-72597048 None:intergenic 30.0%
AATTGTTGTGAGAGAATTCT+TGG + chr5.1:72598696-72598715 MS.gene017078:intron 30.0%
ACAACCAGAATATCATTAGA+GGG - chr5.1:72597917-72597936 None:intergenic 30.0%
AGTCTTAATGATTTGAATGC+AGG - chr5.1:72598982-72599001 None:intergenic 30.0%
ATTGTTGTAGGTATTTCTTG+AGG + chr5.1:72597307-72597326 MS.gene017078:intron 30.0%
ATTTATACTTAGGCTGTGTT+TGG + chr5.1:72597445-72597464 MS.gene017078:intron 30.0%
GTCTTAATGATTTGAATGCA+GGG - chr5.1:72598981-72599000 None:intergenic 30.0%
TAAACAAGTGCTTATAAGGT+AGG - chr5.1:72597653-72597672 None:intergenic 30.0%
TAAATAGATGGTACTTTGGT+TGG + chr5.1:72598373-72598392 MS.gene017078:intron 30.0%
TAATAGCTAAAGCAAACACA+GGG - chr5.1:72598732-72598751 None:intergenic 30.0%
TCCAAAAAGATGGAAATTGA+AGG - chr5.1:72598760-72598779 None:intergenic 30.0%
TCTTCGAATAGACATCAAAA+AGG - chr5.1:72598167-72598186 None:intergenic 30.0%
TGGTTAAACAAGTGCTTATA+AGG - chr5.1:72597657-72597676 None:intergenic 30.0%
TGGTTATCACAATATGTACA+AGG + chr5.1:72598878-72598897 MS.gene017078:CDS 30.0%
TTGTGTCTATCTCTCATAAA+TGG - chr5.1:72597881-72597900 None:intergenic 30.0%
! ACCTTCAATTTCCATCTTTT+TGG + chr5.1:72598756-72598775 MS.gene017078:intron 30.0%
! ATTTCCATCTTTTTGGACAT+AGG + chr5.1:72598763-72598782 MS.gene017078:intron 30.0%
! ATTTTGTGTGAATCGTAACA+CGG + chr5.1:72597046-72597065 MS.gene017078:intron 30.0%
! TTTCCATCTTTTTGGACATA+GGG + chr5.1:72598764-72598783 MS.gene017078:intron 30.0%
!! AGAGGAGTAAGTTATTTCTT+AGG + chr5.1:72597762-72597781 MS.gene017078:intron 30.0%
!!! GAAAAGTAATGGACAAGTTT+TGG + chr5.1:72597347-72597366 MS.gene017078:CDS 30.0%
AAGCTTCATGCGATAAATCT+TGG - chr5.1:72597149-72597168 None:intergenic 35.0%
AGAGCAAACTTGAACTCATA+TGG + chr5.1:72597971-72597990 MS.gene017078:intron 35.0%
AGATTTATCGCATGAAGCTT+TGG + chr5.1:72597149-72597168 MS.gene017078:CDS 35.0%
AGCTTCATGCGATAAATCTT+GGG - chr5.1:72597148-72597167 None:intergenic 35.0%
CAAACATAGGTAACCAGTTA+TGG + chr5.1:72598546-72598565 MS.gene017078:intron 35.0%
CACAACCAGAATATCATTAG+AGG - chr5.1:72597918-72597937 None:intergenic 35.0%
CATAAATGGAGGTAAATGGA+TGG - chr5.1:72597867-72597886 None:intergenic 35.0%
CATAACTGGTTACCTATGTT+TGG - chr5.1:72598548-72598567 None:intergenic 35.0%
CCATAGTTCTTAATCTTGGT+AGG - chr5.1:72598831-72598850 None:intergenic 35.0%
CCTACCAAGATTAAGAACTA+TGG + chr5.1:72598828-72598847 MS.gene017078:CDS 35.0%
CTCTCATAAATGGAGGTAAA+TGG - chr5.1:72597871-72597890 None:intergenic 35.0%
CTGTGGAGTTAATGTTAAGT+TGG + chr5.1:72597695-72597714 MS.gene017078:intron 35.0%
GATTTATCGCATGAAGCTTT+GGG + chr5.1:72597150-72597169 MS.gene017078:CDS 35.0%
GTAATAGCTAAAGCAAACAC+AGG - chr5.1:72598733-72598752 None:intergenic 35.0%
GTTCTGTTGTGATTATTGCT+GGG + chr5.1:72598433-72598452 MS.gene017078:intron 35.0%
TAATCTTCTTGTACACCAGA+GGG - chr5.1:72599073-72599092 None:intergenic 35.0%
TACCGTGATACTACTCTAAA+CGG + chr5.1:72598903-72598922 MS.gene017078:CDS 35.0%
TGTCTATCTCTCATAAATGG+AGG - chr5.1:72597878-72597897 None:intergenic 35.0%
TGTGTACGAGGTAGATAAAT+GGG + chr5.1:72598234-72598253 MS.gene017078:intron 35.0%
TGTTCTGTTGTGATTATTGC+TGG + chr5.1:72598432-72598451 MS.gene017078:intron 35.0%
TTTCTTGAGGAAGTTGAAGA+AGG + chr5.1:72597320-72597339 MS.gene017078:CDS 35.0%
! TTCCATCTTTTTGGACATAG+GGG + chr5.1:72598765-72598784 MS.gene017078:intron 35.0%
! TTTTGTGTGAATCGTAACAC+GGG + chr5.1:72597047-72597066 MS.gene017078:intron 35.0%
!! ATGGTACTTTGGTTGGTAAA+GGG + chr5.1:72598380-72598399 MS.gene017078:intron 35.0%
!! TAACTCCACAGCTGTTTTAA+GGG - chr5.1:72597686-72597705 None:intergenic 35.0%
!! TTAACTCCACAGCTGTTTTA+AGG - chr5.1:72597687-72597706 None:intergenic 35.0%
!!! ACAAGTTTTGGCTATCAATG+AGG + chr5.1:72597359-72597378 MS.gene017078:CDS 35.0%
!!! TGGCTTTGTAGGTTGTTTTT+AGG - chr5.1:72599112-72599131 None:intergenic 35.0%
AACCCCTATGTCCAAAAAGA+TGG - chr5.1:72598770-72598789 None:intergenic 40.0%
AATAACTTACTCCTCTCCAC+AGG - chr5.1:72597758-72597777 None:intergenic 40.0%
ATAACTTACTCCTCTCCACA+GGG - chr5.1:72597757-72597776 None:intergenic 40.0%
CTAATCTTCTTGTACACCAG+AGG - chr5.1:72599074-72599093 None:intergenic 40.0%
CTAGATTCCACCATGACTTA+GGG - chr5.1:72598213-72598232 None:intergenic 40.0%
CTCTGGTGTACAAGAAGATT+AGG + chr5.1:72599072-72599091 MS.gene017078:CDS 40.0%
GATAGACACAAACGATAGAG+TGG + chr5.1:72597890-72597909 MS.gene017078:intron 40.0%
GCAAACTTGAACTCATATGG+CGG + chr5.1:72597974-72597993 MS.gene017078:intron 40.0%
GTGTGTACGAGGTAGATAAA+TGG + chr5.1:72598233-72598252 MS.gene017078:intron 40.0%
TACTTAGGCTGTGTTTGGAT+TGG + chr5.1:72597450-72597469 MS.gene017078:intron 40.0%
TGGACCCTCTAATGATATTC+TGG + chr5.1:72597910-72597929 MS.gene017078:intron 40.0%
TGTAACCTTTCCCTAAGTCA+TGG + chr5.1:72598200-72598219 MS.gene017078:intron 40.0%
TGTGAGAGAATTCTTGGAGT+AGG + chr5.1:72598702-72598721 MS.gene017078:intron 40.0%
TGTTACTCCGATTGCAAGTA+GGG + chr5.1:72598407-72598426 MS.gene017078:intron 40.0%
TTCCAAAATCAAGTTCCCTC+TGG + chr5.1:72599055-72599074 MS.gene017078:CDS 40.0%
TTCGTGCCAAATCCAAATTC+TGG + chr5.1:72597185-72597204 MS.gene017078:CDS 40.0%
! CATAAACAGGTTTGGCTTCT+TGG - chr5.1:72599132-72599151 None:intergenic 40.0%
! CTTGGGATGTTCATCCTTTT+CGG - chr5.1:72597131-72597150 None:intergenic 40.0%
! GAGTATAATTTTGCACCCTG+TGG + chr5.1:72597739-72597758 MS.gene017078:intron 40.0%
!! GATGGTACTTTGGTTGGTAA+AGG + chr5.1:72598379-72598398 MS.gene017078:intron 40.0%
!! TACTTTGGTTGGTAAAGGGA+AGG + chr5.1:72598384-72598403 MS.gene017078:intron 40.0%
!!! AGCTGTTTTAAGGGACTGTT+TGG - chr5.1:72597677-72597696 None:intergenic 40.0%
!!! GTTGTTTTTAGGCTCCTAGT+TGG - chr5.1:72599101-72599120 None:intergenic 40.0%
AACCTTTCCCTAAGTCATGG+TGG + chr5.1:72598203-72598222 MS.gene017078:intron 45.0%
ACAGTCCCTTAAAACAGCTG+TGG + chr5.1:72597678-72597697 MS.gene017078:intron 45.0%
AGAAGATTAGGCCACCAACT+AGG + chr5.1:72599084-72599103 MS.gene017078:CDS 45.0%
CCCAGCTAATCTGTGCAAAA+GGG + chr5.1:72599010-72599029 MS.gene017078:CDS 45.0%
CCTAGATTCCACCATGACTT+AGG - chr5.1:72598214-72598233 None:intergenic 45.0%
GAAACAGTTTCACCAGTACC+AGG + chr5.1:72597084-72597103 MS.gene017078:intron 45.0%
GAACAAGCCCTACTTGCAAT+CGG - chr5.1:72598417-72598436 None:intergenic 45.0%
GACTTGCATAAGCGCTTATG+AGG + chr5.1:72597501-72597520 MS.gene017078:intron 45.0%
GGAGACAATGTACAACGAGA+TGG + chr5.1:72598932-72598951 MS.gene017078:CDS 45.0%
TCCCAGCTAATCTGTGCAAA+AGG + chr5.1:72599009-72599028 MS.gene017078:CDS 45.0%
TTCCACCATGACTTAGGGAA+AGG - chr5.1:72598208-72598227 None:intergenic 45.0%
TTGCGTTATCAGAGTCGTAC+TGG + chr5.1:72598858-72598877 MS.gene017078:CDS 45.0%
TTTCACCAGTACCAGGTTGT+TGG + chr5.1:72597091-72597110 MS.gene017078:CDS 45.0%
! ATATGGCGGCGATTTGACTT+TGG + chr5.1:72597988-72598007 MS.gene017078:intron 45.0%
! CACCAGAGGGAACTTGATTT+TGG - chr5.1:72599060-72599079 None:intergenic 45.0%
! CCTAAGTCATGGTGGAATCT+AGG + chr5.1:72598211-72598230 MS.gene017078:intron 45.0%
! CGCCGTTTAGAGTAGTATCA+CGG - chr5.1:72598908-72598927 None:intergenic 45.0%
! GGATGTTCATCCTTTTCGGT+GGG - chr5.1:72597127-72597146 None:intergenic 45.0%
! GTGTTACTCCGATTGCAAGT+AGG + chr5.1:72598406-72598425 MS.gene017078:intron 45.0%
! TAATTTTGCACCCTGTGGAG+AGG + chr5.1:72597744-72597763 MS.gene017078:intron 45.0%
! TATGGCGGCGATTTGACTTT+GGG + chr5.1:72597989-72598008 MS.gene017078:intron 45.0%
! TCCCTTTTGCACAGATTAGC+TGG - chr5.1:72599014-72599033 None:intergenic 45.0%
! TTTGCACAGATTAGCTGGGA+TGG - chr5.1:72599009-72599028 None:intergenic 45.0%
!! CCCTTTTGCACAGATTAGCT+GGG - chr5.1:72599013-72599032 None:intergenic 45.0%
!! GTTTGGCTTCTTGGCTTTGT+AGG - chr5.1:72599123-72599142 None:intergenic 45.0%
!! GTTTTTAGGCTCCTAGTTGG+TGG - chr5.1:72599098-72599117 None:intergenic 45.0%
ACGAGATGGCATCTCGTCAT+AGG + chr5.1:72598946-72598965 MS.gene017078:CDS 50.0%
CGAGATGGCATCTCGTCATA+GGG + chr5.1:72598947-72598966 MS.gene017078:CDS 50.0%
CTCTTCCAACAACCTGGTAC+TGG - chr5.1:72597099-72597118 None:intergenic 50.0%
GGATTTGGCACGAACCTCAT+TGG - chr5.1:72597179-72597198 None:intergenic 50.0%
GTGGAATCTAGGTGTGTACG+AGG + chr5.1:72598222-72598241 MS.gene017078:intron 50.0%
TACTACTCTAAACGGCGCTG+TGG + chr5.1:72598911-72598930 MS.gene017078:CDS 50.0%
! GAAGTGCTCTTCCAACAACC+TGG - chr5.1:72597105-72597124 None:intergenic 50.0%
! GGGATGTTCATCCTTTTCGG+TGG - chr5.1:72597128-72597147 None:intergenic 50.0%
!! AAGAGCACTTCCCACCGAAA+AGG + chr5.1:72597114-72597133 MS.gene017078:CDS 50.0%
!! GAAGCTTTGGGCAACCAATG+AGG + chr5.1:72597162-72597181 MS.gene017078:CDS 50.0%
TGGCATCTCGTCATAGGGTC+AGG + chr5.1:72598952-72598971 MS.gene017078:CDS 55.0%
! GCACAGATTAGCTGGGATGG+TGG - chr5.1:72599006-72599025 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 72596981 72599154 72596981 ID=MS.gene017078
chr5.1 mRNA 72596981 72599154 72596981 ID=MS.gene017078.t1;Parent=MS.gene017078
chr5.1 exon 72596981 72596995 72596981 ID=MS.gene017078.t1.exon1;Parent=MS.gene017078.t1
chr5.1 CDS 72596981 72596995 72596981 ID=cds.MS.gene017078.t1;Parent=MS.gene017078.t1
chr5.1 exon 72597091 72597206 72597091 ID=MS.gene017078.t1.exon2;Parent=MS.gene017078.t1
chr5.1 CDS 72597091 72597206 72597091 ID=cds.MS.gene017078.t1;Parent=MS.gene017078.t1
chr5.1 exon 72597317 72597380 72597317 ID=MS.gene017078.t1.exon3;Parent=MS.gene017078.t1
chr5.1 CDS 72597317 72597380 72597317 ID=cds.MS.gene017078.t1;Parent=MS.gene017078.t1
chr5.1 exon 72598813 72599154 72598813 ID=MS.gene017078.t1.exon4;Parent=MS.gene017078.t1
chr5.1 CDS 72598813 72599154 72598813 ID=cds.MS.gene017078.t1;Parent=MS.gene017078.t1
Gene Sequence

>MS.gene017078

ATGGTTAACGCTAAGGTATGAATTTTCTTCATTTTTCATTCTTTTCCACCTTTTGAGCTGATTTTATTTTGTGTGAATCGTAACACGGGTATAAACTTTTGTTGAAACAGTTTCACCAGTACCAGGTTGTTGGAAGAGCACTTCCCACCGAAAAGGATGAACATCCCAAGATTTATCGCATGAAGCTTTGGGCAACCAATGAGGTTCGTGCCAAATCCAAATTCTGGTAAGTTTCTAATTCATTATCAAATTCTAATGTTTATGATTTTTTTTTTTTTATAATGATTAACTATTTAATATTAATAACTGTGATATTAATAATGTTAATTGTTGTAGGTATTTCTTGAGGAAGTTGAAGAAGGTTAAGAAAAGTAATGGACAAGTTTTGGCTATCAATGAGGTATGCACATTCATTTATCGTACCTGTTAATTGAAATTTTATAGAAGGGTTGTAGTTAAGCTAGATTTATACTTAGGCTGTGTTTGGATTGGACTTTTAACCAGCTTATTTGTTTTTATTGACTTGCATAAGCGCTTATGAGGTATTTGTAGAGCTTTTTTTTTTAGGTAAAGCAAGGTATTTGTAGAGCTTAAGATATCAATTTATATGATATTTAAATGATTTTAGCTCATTTCAATTTGCATGTAAAAGCTTTTATTTGGTAAATACCTACCTTATAAGCACTTGTTTAACCAAACAGTCCCTTAAAACAGCTGTGGAGTTAATGTTAAGTTGGAATAGAAAAAATTAATGATAGGAGTATAATTTTGCACCCTGTGGAGAGGAGTAAGTTATTTCTTAGGCATATATTAGTATATTGTACAGTTGGATGAATTGAAAATGAGTTCTATGCTTAGAGAGACTCTCTTAGTCTATTATGTACCATCCATTTACCTCCATTTATGAGAGATAGACACAAACGATAGAGTGGACCCTCTAATGATATTCTGGTTGTGTCTATTTCTCTCATAAATAGAGGGTAGATAAATAGAGCAAACTTGAACTCATATGGCGGCGATTTGACTTTGGGAATTTGTATATTATGTAATGTAATATCTGTCAGTTTTTGGAAGAAAATGTTTTTCTAATCTTTTTTGTTGTCTTTAGCAGAAAATAGTTTTGATTATGAGAAGTTGTTTATTATTTAATATCTGTCACTTTTTGAAAGAAAATGTTTTGTTTCCTTTTTGATGTCTATTCGAAGAAGATAGTTTTCTTTGTAACCTTTCCCTAAGTCATGGTGGAATCTAGGTGTGTACGAGGTAGATAAATGGGTACAAATAAATTGTGATGCTTGAGAAAATTAAGTTTGATGCGGATCTCCATTTTTTTTTATTTGTTGCTTTAAAAGTTAAATAGCATTTTGTGTTCAATTTTAATCAAATTGATTTTAAATAGATGGTACTTTGGTTGGTAAAGGGAAGGTGTTACTCCGATTGCAAGTAGGGCTTGTTCTGTTGTGATTATTGCTGGGATAAAATTTGCTATGTTAACTTGTTGAGAAGTCACTTGCTAAATATTTGAGTGTAAGCTGTTTTGATTGAAGACTAATTATGTTGAAATCCAAACATAGGTAACCAGTTATGGCAATACATCATTTTAGTTGATTTCTCCTTTAAATTGTATATTGTGACTAATATCATAGTTGAACTTGAAAATTATGCCCCTTTTTTTTATTGTATTTTGTTTCGATTATTCGAAGAAAAGTAATGCTAATTGTTGTGAGAGAATTCTTGGAGTAGGATTTCCCTGTGTTTGCTTTAGCTATTACTTTACCTTCAATTTCCATCTTTTTGGACATAGGGGTTGATGCTACTTTTTTTTATTGCAGATCTTCGAGAAAAATCCTACCAAGATTAAGAACTATGGAATTTGGTTGCGTTATCAGAGTCGTACTGGTTATCACAATATGTACAAGGAATACCGTGATACTACTCTAAACGGCGCTGTGGAGACAATGTACAACGAGATGGCATCTCGTCATAGGGTCAGGTTTCCCTGCATTCAAATCATTAAGACTGCCACCATCCCAGCTAATCTGTGCAAAAGGGAGAGCACTAAGCAGTTTCACAATTCCAAAATCAAGTTCCCTCTGGTGTACAAGAAGATTAGGCCACCAACTAGGAGCCTAAAAACAACCTACAAAGCCAAGAAGCCAAACCTGTTTATGTGA
Protein sequence

>MS.gene017078.t1

MVNAKFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVETMYNEMASRHRVRFPCIQIIKTATIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRSLKTTYKAKKPNLFM