Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09187.t1 | KEH20552.1 | 94.6 | 370 | 20 | 0 | 1 | 370 | 1 | 370 | 1.20E-201 | 712.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09187.t1 | Q8VYP6 | 53.3 | 368 | 150 | 9 | 10 | 364 | 10 | 368 | 9.5e-102 | 371.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09187.t1 | A0A072TT04 | 94.6 | 370 | 20 | 0 | 1 | 370 | 1 | 370 | 8.9e-202 | 712.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene09187 | -0.813919 | 2.01E-51 | -1.69E-46 |
| MS.gene04917 | MS.gene09187 | -0.810471 | 1.13E-50 | -1.69E-46 |
| MS.gene04991 | MS.gene09187 | 0.818219 | 2.20E-52 | -1.69E-46 |
| MS.gene050361 | MS.gene09187 | -0.810343 | 1.21E-50 | -1.69E-46 |
| MS.gene050762 | MS.gene09187 | -0.818063 | 2.38E-52 | -1.69E-46 |
| MS.gene050763 | MS.gene09187 | -0.817583 | 3.06E-52 | -1.69E-46 |
| MS.gene050826 | MS.gene09187 | -0.801689 | 8.00E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene09187 | -0.806979 | 6.32E-50 | -1.69E-46 |
| MS.gene051631 | MS.gene09187 | 0.841621 | 4.25E-58 | -1.69E-46 |
| MS.gene05344 | MS.gene09187 | 0.800047 | 1.73E-48 | -1.69E-46 |
| MS.gene054379 | MS.gene09187 | -0.818088 | 2.35E-52 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09187.t1 | MTR_8g080140 | 94.595 | 370 | 20 | 0 | 1 | 370 | 1 | 370 | 0.0 | 715 |
| MS.gene09187.t1 | MTR_8g080150 | 68.347 | 357 | 105 | 4 | 1 | 353 | 1 | 353 | 5.26e-172 | 484 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09187.t1 | AT5G11010 | 53.261 | 368 | 150 | 9 | 10 | 364 | 10 | 368 | 1.79e-127 | 371 |
| MS.gene09187.t1 | AT5G11010 | 53.261 | 368 | 150 | 9 | 10 | 364 | 10 | 368 | 1.79e-127 | 371 |
| MS.gene09187.t1 | AT5G11010 | 53.261 | 368 | 150 | 9 | 10 | 364 | 10 | 368 | 1.79e-127 | 371 |
| MS.gene09187.t1 | AT5G11010 | 52.104 | 309 | 132 | 8 | 10 | 311 | 10 | 309 | 8.12e-105 | 311 |
Find 93 sgRNAs with CRISPR-Local
Find 344 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATAAACAAGTAGGAATT+TGG | 0.234721 | 4.2:-15027094 | None:intergenic |
| AATACTTCTGGCTGGGTTAA+AGG | 0.244134 | 4.2:+15023933 | MS.gene09187:CDS |
| ATTTACCTGCTGGAAAATTC+TGG | 0.277149 | 4.2:+15024198 | MS.gene09187:CDS |
| TCTTGCATCTGGTTGCTAAT+AGG | 0.301989 | 4.2:-15022924 | None:intergenic |
| AATTCCTACTTGTTTATTGC+AGG | 0.309415 | 4.2:+15027097 | MS.gene09187:CDS |
| CGAGATAGATTCAGTTCTTA+AGG | 0.329341 | 4.2:+15024256 | MS.gene09187:CDS |
| CAAACTGAGTTTACTCCTCT+TGG | 0.341189 | 4.2:+15022976 | MS.gene09187:CDS |
| GCTGGAAAATTCTGGTTAGA+TGG | 0.341592 | 4.2:+15024206 | MS.gene09187:CDS |
| ATAAGCTACTTTCTTGCATC+TGG | 0.349894 | 4.2:-15022935 | None:intergenic |
| GCAGCTTGTGACCATTCATC+TGG | 0.352128 | 4.2:-15022805 | None:intergenic |
| CCCCAGGGAGTTTGTTCAAA+AGG | 0.361346 | 4.2:+15024384 | MS.gene09187:intron |
| GTTGATTTGCCAACACTTCC+AGG | 0.361840 | 4.2:-15022877 | None:intergenic |
| AGTACTTGAAACCATCAAAA+AGG | 0.368009 | 4.2:+15023141 | MS.gene09187:CDS |
| TGGTTGCTAATAGGAGATTA+AGG | 0.374760 | 4.2:-15022915 | None:intergenic |
| AACACTGATGGATCTATCTT+AGG | 0.381453 | 4.2:-15023810 | None:intergenic |
| CCCACACATGTTGTTAAGAT+AGG | 0.383733 | 4.2:+15024146 | MS.gene09187:CDS |
| CCTCTTATAGTGAATACTTC+TGG | 0.384908 | 4.2:+15023921 | MS.gene09187:CDS |
| TCATCTGGGATGAAAATATC+TGG | 0.385934 | 4.2:-15022790 | None:intergenic |
| AGCCAACAATACTAGCATTC+AGG | 0.392276 | 4.2:-15024982 | None:intergenic |
| TTACCCTGGTGCCTTGGTCT+TGG | 0.393880 | 4.2:+15025034 | MS.gene09187:CDS |
| GTCGTACTCGTTTGTGGACC+TGG | 0.396974 | 4.2:+15022859 | MS.gene09187:CDS |
| CCAGAAGTATTCACTATAAG+AGG | 0.406197 | 4.2:-15023921 | None:intergenic |
| GGCCTGAATGCTAGTATTGT+TGG | 0.412902 | 4.2:+15024980 | MS.gene09187:CDS |
| TTATAGTGAATACTTCTGGC+TGG | 0.413967 | 4.2:+15023925 | MS.gene09187:CDS |
| GTGGACATGCTAAAATATAT+TGG | 0.414066 | 4.2:+15024122 | MS.gene09187:CDS |
| CAAGAGGAGTAAACTCAGTT+TGG | 0.425282 | 4.2:-15022975 | None:intergenic |
| TACGACGGGAGGCGTTGAAC+TGG | 0.430588 | 4.2:-15022842 | None:intergenic |
| ATTCTATTGTGGTCTCTGTA+TGG | 0.437467 | 4.2:-15027674 | None:intergenic |
| AAAAGTCAACCTCTTGCTAC+AGG | 0.438339 | 4.2:+15027064 | MS.gene09187:CDS |
| CCTGCGTGGCGAACGGATAG+TGG | 0.442876 | 4.2:+15024417 | MS.gene09187:CDS |
| CCGTAGAATATTTCAGAGCT+TGG | 0.444402 | 4.2:-15024959 | None:intergenic |
| CCTCCCGTCGTACTCGTTTG+TGG | 0.446281 | 4.2:+15022853 | MS.gene09187:CDS |
| GGAGATTTACCCTGGTGCCT+TGG | 0.462451 | 4.2:+15025028 | MS.gene09187:CDS |
| CGAATCTTTATGCTTGCAAT+GGG | 0.463513 | 4.2:-15024532 | None:intergenic |
| TGTTGGTTATGAAGTATTAG+TGG | 0.466461 | 4.2:+15024103 | MS.gene09187:CDS |
| CGTAGAATATTTCAGAGCTT+GGG | 0.466484 | 4.2:-15024958 | None:intergenic |
| CTGGAAAATTCTGGTTAGAT+GGG | 0.476615 | 4.2:+15024207 | MS.gene09187:CDS |
| CTTGCAATGGGAACTTGATA+AGG | 0.478521 | 4.2:-15024520 | None:intergenic |
| AAATTTAAGAATTTACCTGC+TGG | 0.484367 | 4.2:+15024188 | MS.gene09187:CDS |
| TTCAGAGAAACAAATGGCAC+AGG | 0.495894 | 4.2:-15027041 | None:intergenic |
| CTTACCTGCAATAAACAAGT+AGG | 0.503057 | 4.2:-15027101 | None:intergenic |
| CAGCTTGTGACCATTCATCT+GGG | 0.510594 | 4.2:-15022804 | None:intergenic |
| CTCGTCTCCTGCGTGGCGAA+CGG | 0.511504 | 4.2:+15024410 | MS.gene09187:CDS |
| TAGATTCAGTTCTTAAGGAC+CGG | 0.517139 | 4.2:+15024261 | MS.gene09187:CDS |
| TCGAATCTTTATGCTTGCAA+TGG | 0.517870 | 4.2:-15024533 | None:intergenic |
| TGGTTAGATGGGGAAGATGA+TGG | 0.521887 | 4.2:+15024218 | MS.gene09187:CDS |
| CTTAAATTTATAAAATTCAG+TGG | 0.522288 | 4.2:-15024174 | None:intergenic |
| TATAGTGAATACTTCTGGCT+GGG | 0.525760 | 4.2:+15023926 | MS.gene09187:CDS |
| CCTACCAAGACCAAGGCACC+AGG | 0.529524 | 4.2:-15025038 | None:intergenic |
| GTTGTTTACGAAGTTACTCC+AGG | 0.545994 | 4.2:+15023015 | MS.gene09187:CDS |
| CCAAGCTCTGAAATATTCTA+CGG | 0.547357 | 4.2:+15024959 | MS.gene09187:CDS |
| GCCTATCTTAACAACATGTG+TGG | 0.557846 | 4.2:-15024147 | None:intergenic |
| AGGCACCAGGGTAAATCTCC+AGG | 0.558138 | 4.2:-15025025 | None:intergenic |
| GCAGTTGAATCTGAAGTACC+TGG | 0.560619 | 4.2:+15025007 | MS.gene09187:CDS |
| TGGTCAAGGCTATTCTATTG+TGG | 0.563455 | 4.2:-15027685 | None:intergenic |
| TTCAGATATGTCATCGGACA+AGG | 0.564343 | 4.2:+15024468 | MS.gene09187:CDS |
| GGGATGAAAATATCTGGTGA+AGG | 0.564972 | 4.2:-15022784 | None:intergenic |
| TAGGAGATTAAGGAGATAGC+GGG | 0.565444 | 4.2:-15022905 | None:intergenic |
| AGGGGCATTGACACGGTCAA+AGG | 0.567190 | 4.2:+15026999 | MS.gene09187:CDS |
| GGTCCACAAACGAGTACGAC+GGG | 0.570389 | 4.2:-15022856 | None:intergenic |
| CTTGTGACACAGGAATTGTG+AGG | 0.582422 | 4.2:+15026979 | MS.gene09187:intron |
| ACATACTCTAAGAACACTGA+TGG | 0.583221 | 4.2:-15023822 | None:intergenic |
| GGATGAAAATATCTGGTGAA+GGG | 0.583452 | 4.2:-15022783 | None:intergenic |
| ATAAGGACAGTGAGATGTCA+AGG | 0.584321 | 4.2:-15024503 | None:intergenic |
| CCACTATCCGTTCGCCACGC+AGG | 0.585492 | 4.2:-15024417 | None:intergenic |
| TTGTGACACAGGAATTGTGA+GGG | 0.589012 | 4.2:+15026980 | MS.gene09187:intron |
| CAGGGAGTTTGTTCAAAAGG+AGG | 0.595105 | 4.2:+15024387 | MS.gene09187:intron |
| GAACGGCGTAGTGGTGGTCA+AGG | 0.598382 | 4.2:-15027699 | None:intergenic |
| TTAAGTGAACGGCGTAGTGG+TGG | 0.601532 | 4.2:-15027705 | None:intergenic |
| GAGTGCCCAAATTAAGTGAA+CGG | 0.601881 | 4.2:-15027716 | None:intergenic |
| GGATATCACCCTGTAGCAAG+AGG | 0.602061 | 4.2:-15027073 | None:intergenic |
| ATTAAGGAGATAGCGGGCGA+AGG | 0.607891 | 4.2:-15022899 | None:intergenic |
| GATTCGACATGTTCATCGTG+AGG | 0.617943 | 4.2:+15024549 | MS.gene09187:CDS |
| AGGCGTTGAACTGGATACAA+TGG | 0.618822 | 4.2:-15022833 | None:intergenic |
| CCTATCTTAACAACATGTGT+GGG | 0.620818 | 4.2:-15024146 | None:intergenic |
| GCTTATCTTGATACCGACGT+TGG | 0.626457 | 4.2:+15022952 | MS.gene09187:CDS |
| AAGTACCTGGAGATTTACCC+TGG | 0.626705 | 4.2:+15025020 | MS.gene09187:CDS |
| GTTTGTGGACCTGGAAGTGT+TGG | 0.628940 | 4.2:+15022868 | MS.gene09187:CDS |
| TAGTGATTCAGATATGTCAT+CGG | 0.630930 | 4.2:+15024462 | MS.gene09187:CDS |
| AATTGTGAGGGGCATTGACA+CGG | 0.634135 | 4.2:+15026992 | MS.gene09187:CDS |
| AAAGTCAACCTCTTGCTACA+GGG | 0.642893 | 4.2:+15027065 | MS.gene09187:CDS |
| GTTAGAGAGATTAAACCAAG+AGG | 0.643471 | 4.2:-15022991 | None:intergenic |
| AAATTAAGTGAACGGCGTAG+TGG | 0.651145 | 4.2:-15027708 | None:intergenic |
| TGGAAAATTCTGGTTAGATG+GGG | 0.652558 | 4.2:+15024208 | MS.gene09187:CDS |
| ATAGGAGATTAAGGAGATAG+CGG | 0.661098 | 4.2:-15022906 | None:intergenic |
| AAGGAGGCTCGTCTCCTGCG+TGG | 0.674748 | 4.2:+15024403 | MS.gene09187:CDS |
| CCACAAACGAGTACGACGGG+AGG | 0.678624 | 4.2:-15022853 | None:intergenic |
| TGTGACACAGGAATTGTGAG+GGG | 0.679439 | 4.2:+15026981 | MS.gene09187:intron |
| GATGACATATCTGAATCACT+AGG | 0.681511 | 4.2:-15024460 | None:intergenic |
| CAAGTTACCTACCAAGACCA+AGG | 0.684244 | 4.2:-15025045 | None:intergenic |
| AGGTCCACAAACGAGTACGA+CGG | 0.697355 | 4.2:-15022857 | None:intergenic |
| AAACTCAGTTTGGCCAACGT+CGG | 0.697748 | 4.2:-15022965 | None:intergenic |
| CTACCAAGACCAAGGCACCA+GGG | 0.712305 | 4.2:-15025037 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTGTTTATTTTTATATAA+AGG | + | chr4.2:15024893-15024912 | MS.gene09187:intron | 10.0% |
| !! | CTTAAATTTATAAAATTCAG+TGG | - | chr4.2:15024177-15024196 | None:intergenic | 15.0% |
| !!! | AAAATATTTGAAATTCAAAG+TGG | - | chr4.2:15024793-15024812 | None:intergenic | 15.0% |
| !!! | AATTCTCTAAAATTATAAAG+GGG | - | chr4.2:15027375-15027394 | None:intergenic | 15.0% |
| !!! | GAATTCTCTAAAATTATAAA+GGG | - | chr4.2:15027376-15027395 | None:intergenic | 15.0% |
| !!! | TATTTGAAATTTCAAAAGAA+CGG | + | chr4.2:15023401-15023420 | MS.gene09187:intron | 15.0% |
| !!! | TGAATTCTCTAAAATTATAA+AGG | - | chr4.2:15027377-15027396 | None:intergenic | 15.0% |
| !! | AAAGATTATAACTCTTGATT+GGG | + | chr4.2:15027636-15027655 | MS.gene09187:intron | 20.0% |
| !! | AATAAAACCAAGCATATAAA+GGG | - | chr4.2:15024761-15024780 | None:intergenic | 20.0% |
| !! | AATAAATTTAAACTTCGATC+TGG | + | chr4.2:15026259-15026278 | MS.gene09187:intron | 20.0% |
| !! | AATCAAGAGTTATAATCTTT+GGG | - | chr4.2:15027636-15027655 | None:intergenic | 20.0% |
| !! | ATAGTATATATATGAGTATC+AGG | + | chr4.2:15027534-15027553 | MS.gene09187:intron | 20.0% |
| !! | ATCTTATTATTAGTGTGTTT+GGG | + | chr4.2:15027477-15027496 | MS.gene09187:intron | 20.0% |
| !! | GTAAAAATGAAGATTAAGAT+AGG | - | chr4.2:15023059-15023078 | None:intergenic | 20.0% |
| !! | TAATAACAATGAAATAGACT+AGG | - | chr4.2:15023609-15023628 | None:intergenic | 20.0% |
| !! | TACAAAATGTATGATTCAAA+AGG | - | chr4.2:15023992-15024011 | None:intergenic | 20.0% |
| !! | TATATGACATTCTTAATGAT+TGG | - | chr4.2:15023511-15023530 | None:intergenic | 20.0% |
| !! | TATCTTATTATTAGTGTGTT+TGG | + | chr4.2:15027476-15027495 | MS.gene09187:intron | 20.0% |
| !! | TCTATATATACACAAGAATA+AGG | + | chr4.2:15025174-15025193 | MS.gene09187:intron | 20.0% |
| !!! | ATCTATTTCTTGATTTCAAT+AGG | + | chr4.2:15027450-15027469 | MS.gene09187:intron | 20.0% |
| !!! | CTTTTGATAATGATCATAAA+TGG | - | chr4.2:15023853-15023872 | None:intergenic | 20.0% |
| !!! | TCTTAATGATTGGTTATTTA+TGG | - | chr4.2:15023501-15023520 | None:intergenic | 20.0% |
| !!! | TGAATTTGAAATATTTGACA+AGG | + | chr4.2:15023210-15023229 | MS.gene09187:intron | 20.0% |
| ! | AAATTTAAGAATTTACCTGC+TGG | + | chr4.2:15024188-15024207 | MS.gene09187:CDS | 25.0% |
| ! | ATGAAGATTAAGATAGGTAA+TGG | - | chr4.2:15023053-15023072 | None:intergenic | 25.0% |
| ! | CAAAAGGAATATACATTTGT+GGG | + | chr4.2:15026326-15026345 | MS.gene09187:intron | 25.0% |
| ! | CAAAGATTATAACTCTTGAT+TGG | + | chr4.2:15027635-15027654 | MS.gene09187:intron | 25.0% |
| ! | CAATAAAACCAAGCATATAA+AGG | - | chr4.2:15024762-15024781 | None:intergenic | 25.0% |
| ! | CAATCAAGAGTTATAATCTT+TGG | - | chr4.2:15027637-15027656 | None:intergenic | 25.0% |
| ! | GACATTTGGATTCTAATAAA+AGG | + | chr4.2:15026058-15026077 | MS.gene09187:intron | 25.0% |
| ! | TAAGATAGTTGGTTACTATT+GGG | + | chr4.2:15023327-15023346 | MS.gene09187:intron | 25.0% |
| ! | TATTATGTTACTCATTCAGT+TGG | + | chr4.2:15024061-15024080 | MS.gene09187:intron | 25.0% |
| ! | TCTGCATCATTTACAAAATA+AGG | + | chr4.2:15025301-15025320 | MS.gene09187:intron | 25.0% |
| ! | TCTTATTATTAGTGTGTTTG+GGG | + | chr4.2:15027478-15027497 | MS.gene09187:intron | 25.0% |
| ! | TGTATATATAGAAAACCCAT+AGG | - | chr4.2:15025166-15025185 | None:intergenic | 25.0% |
| ! | TTAAGATAGTTGGTTACTAT+TGG | + | chr4.2:15023326-15023345 | MS.gene09187:intron | 25.0% |
| ! | TTACTTGTAACAGATACAAA+CGG | - | chr4.2:15025879-15025898 | None:intergenic | 25.0% |
| ! | TTATTTATGGTATGTTTGGA+TGG | - | chr4.2:15023488-15023507 | None:intergenic | 25.0% |
| ! | TTCATTGAGTTAAATTCGTT+TGG | - | chr4.2:15025276-15025295 | None:intergenic | 25.0% |
| ! | TTCTCAACATTGAAAAGATT+AGG | + | chr4.2:15025125-15025144 | MS.gene09187:intron | 25.0% |
| ! | TTGGTTATTTATGGTATGTT+TGG | - | chr4.2:15023492-15023511 | None:intergenic | 25.0% |
| ! | TTTCATTAGAATCCAAATGT+CGG | - | chr4.2:15026238-15026257 | None:intergenic | 25.0% |
| !! | ACGTTTTATCAAAGAAAACT+TGG | - | chr4.2:15025522-15025541 | None:intergenic | 25.0% |
| !! | ATAATTTGTCATAAAATGCG+TGG | + | chr4.2:15027239-15027258 | MS.gene09187:intron | 25.0% |
| !! | TTAAGTTGTAACACATCTTA+AGG | + | chr4.2:15026547-15026566 | MS.gene09187:intron | 25.0% |
| !!! | ACTTTTTTCAGAGAAACAAA+TGG | - | chr4.2:15027050-15027069 | None:intergenic | 25.0% |
| !!! | TGACCTATGAATATTTTTGT+AGG | + | chr4.2:15024934-15024953 | MS.gene09187:intron | 25.0% |
| !!! | TTGGTAACACTTTTTTAACA+AGG | - | chr4.2:15027189-15027208 | None:intergenic | 25.0% |
| AAGATAGTTGGTTACTATTG+GGG | + | chr4.2:15023328-15023347 | MS.gene09187:intron | 30.0% | |
| AATAGAATATTGTTTCCCCA+GGG | + | chr4.2:15024369-15024388 | MS.gene09187:intron | 30.0% | |
| AATTCCTACTTGTTTATTGC+AGG | + | chr4.2:15027097-15027116 | MS.gene09187:CDS | 30.0% | |
| AATTGATATGTTGTTAGTCC+AGG | - | chr4.2:15024042-15024061 | None:intergenic | 30.0% | |
| ACAAGTTAATGTTGAGAAGA+AGG | - | chr4.2:15027151-15027170 | None:intergenic | 30.0% | |
| ACCAAATTAGCAGTTAAAGA+TGG | - | chr4.2:15024309-15024328 | None:intergenic | 30.0% | |
| ACCATCTTTAACTGCTAATT+TGG | + | chr4.2:15024305-15024324 | MS.gene09187:intron | 30.0% | |
| AGGATATATTTGACTCTGTT+AGG | + | chr4.2:15023675-15023694 | MS.gene09187:intron | 30.0% | |
| AGTACTTGAAACCATCAAAA+AGG | + | chr4.2:15023141-15023160 | MS.gene09187:CDS | 30.0% | |
| ATCAAAGAAAACTTGGAAAG+TGG | - | chr4.2:15025515-15025534 | None:intergenic | 30.0% | |
| ATGTTCGTTCAAATAAGACT+TGG | - | chr4.2:15023711-15023730 | None:intergenic | 30.0% | |
| ATTTGGGAAATTCTAAGTGT+TGG | + | chr4.2:15026703-15026722 | MS.gene09187:intron | 30.0% | |
| CATTAGGTACATGTAAAGTT+TGG | + | chr4.2:15023274-15023293 | MS.gene09187:intron | 30.0% | |
| CCAAAAGGAATATACATTTG+TGG | + | chr4.2:15026325-15026344 | MS.gene09187:intron | 30.0% | |
| CGTAAACAAAAATCGACATT+TGG | + | chr4.2:15026044-15026063 | MS.gene09187:intron | 30.0% | |
| GACAACATAATAAAGCTGTT+TGG | - | chr4.2:15027208-15027227 | None:intergenic | 30.0% | |
| GACTTGTGATTATGTCTAAA+TGG | + | chr4.2:15025779-15025798 | MS.gene09187:intron | 30.0% | |
| GCAATAAACAAGTAGGAATT+TGG | - | chr4.2:15027097-15027116 | None:intergenic | 30.0% | |
| GCACATAATCACTATTCATT+AGG | + | chr4.2:15023258-15023277 | MS.gene09187:intron | 30.0% | |
| GGACCTACAAAAATATTCAT+AGG | - | chr4.2:15024940-15024959 | None:intergenic | 30.0% | |
| GGATATATTTGACTCTGTTA+GGG | + | chr4.2:15023676-15023695 | MS.gene09187:intron | 30.0% | |
| GGATATCATTAAACACCAAA+AGG | + | chr4.2:15026438-15026457 | MS.gene09187:intron | 30.0% | |
| GTATACAATATTCCAGAACA+TGG | + | chr4.2:15025418-15025437 | MS.gene09187:intron | 30.0% | |
| GTGGACATGCTAAAATATAT+TGG | + | chr4.2:15024122-15024141 | MS.gene09187:CDS | 30.0% | |
| TAATAGAATATTGTTTCCCC+AGG | + | chr4.2:15024368-15024387 | MS.gene09187:intron | 30.0% | |
| TAGTAAATCCCAAACATCAT+CGG | - | chr4.2:15025236-15025255 | None:intergenic | 30.0% | |
| TAGTGATTCAGATATGTCAT+CGG | + | chr4.2:15024462-15024481 | MS.gene09187:CDS | 30.0% | |
| TGGAATATTGTATACATGCT+GGG | - | chr4.2:15025413-15025432 | None:intergenic | 30.0% | |
| TTAATTTCATGTTCTGCCTT+AGG | - | chr4.2:15025746-15025765 | None:intergenic | 30.0% | |
| TTCACTGTATCTCATACATT+TGG | + | chr4.2:15026381-15026400 | MS.gene09187:intron | 30.0% | |
| TTCTTTATCTTCTGTATCTG+TGG | - | chr4.2:15026602-15026621 | None:intergenic | 30.0% | |
| ! | ACATCATTTTACTAATTCCG+TGG | + | chr4.2:15025951-15025970 | MS.gene09187:intron | 30.0% |
| ! | ACGAACATGTTTACTTGTTA+TGG | + | chr4.2:15023723-15023742 | MS.gene09187:intron | 30.0% |
| ! | ATATTTTCATCCCAGATGAA+TGG | + | chr4.2:15022794-15022813 | MS.gene09187:CDS | 30.0% |
| ! | ATGCTTAGTGTTGAAATTTG+GGG | - | chr4.2:15026933-15026952 | None:intergenic | 30.0% |
| ! | CATAGTCTATACCTTTTTGA+TGG | - | chr4.2:15023155-15023174 | None:intergenic | 30.0% |
| ! | CCACAAATGTATATTCCTTT+TGG | - | chr4.2:15026328-15026347 | None:intergenic | 30.0% |
| ! | GATCTTCTAGTTATGCATTT+GGG | + | chr4.2:15026687-15026706 | MS.gene09187:intron | 30.0% |
| ! | GATGCTTAGTGTTGAAATTT+GGG | - | chr4.2:15026934-15026953 | None:intergenic | 30.0% |
| ! | GTGTTATTCAATTGCTAGTT+AGG | + | chr4.2:15023303-15023322 | MS.gene09187:intron | 30.0% |
| ! | GTTTTCTATATACAGTGAAG+TGG | + | chr4.2:15023630-15023649 | MS.gene09187:intron | 30.0% |
| ! | TCTGTCATTTATTCCATAAC+AGG | + | chr4.2:15023763-15023782 | MS.gene09187:intron | 30.0% |
| ! | TGATCTTCTAGTTATGCATT+TGG | + | chr4.2:15026686-15026705 | MS.gene09187:intron | 30.0% |
| ! | TGATGCTTAGTGTTGAAATT+TGG | - | chr4.2:15026935-15026954 | None:intergenic | 30.0% |
| ! | TGTTGGTTATGAAGTATTAG+TGG | + | chr4.2:15024103-15024122 | MS.gene09187:CDS | 30.0% |
| !!! | AATGTCGATTTTTGTTTACG+AGG | - | chr4.2:15026044-15026063 | None:intergenic | 30.0% |
| !!! | AGCATTTTTTCGCTTATCAA+AGG | - | chr4.2:15023886-15023905 | None:intergenic | 30.0% |
| AAATACCTTCATCAGCTTGA+GGG | - | chr4.2:15025384-15025403 | None:intergenic | 35.0% | |
| AATTTCATGTCATCTGCCAT+GGG | + | chr4.2:15027329-15027348 | MS.gene09187:intron | 35.0% | |
| ACTGTATCTCATACGTTTGT+TGG | + | chr4.2:15026357-15026376 | MS.gene09187:intron | 35.0% | |
| AGATAGTTGGTTACTATTGG+GGG | + | chr4.2:15023329-15023348 | MS.gene09187:intron | 35.0% | |
| AGGAATATACATTTGTGGGT+TGG | + | chr4.2:15026330-15026349 | MS.gene09187:intron | 35.0% | |
| AGTCGAACTGTCAAAACATT+AGG | + | chr4.2:15023368-15023387 | MS.gene09187:intron | 35.0% | |
| ATAAAAGGATTCCTTACGCA+TGG | + | chr4.2:15026073-15026092 | MS.gene09187:intron | 35.0% | |
| ATAGGAGATTAAGGAGATAG+CGG | - | chr4.2:15022909-15022928 | None:intergenic | 35.0% | |
| ATCCAAAACAGAACACCTAT+GGG | + | chr4.2:15025148-15025167 | MS.gene09187:intron | 35.0% | |
| ATCTTGATTTCTTGTGACAC+AGG | + | chr4.2:15026969-15026988 | MS.gene09187:intron | 35.0% | |
| ATGTGATCTTCCAATCTTCA+CGG | + | chr4.2:15025642-15025661 | MS.gene09187:intron | 35.0% | |
| ATTAGAATCCAAATGTCGGA+GGG | - | chr4.2:15026234-15026253 | None:intergenic | 35.0% | |
| ATTCTATTGTGGTCTCTGTA+TGG | - | chr4.2:15027677-15027696 | None:intergenic | 35.0% | |
| ATTGGAAGATCACATAGGAT+GGG | - | chr4.2:15025637-15025656 | None:intergenic | 35.0% | |
| ATTTACCTGCTGGAAAATTC+TGG | + | chr4.2:15024198-15024217 | MS.gene09187:CDS | 35.0% | |
| CAAAGAAAAGAGACCTGTTA+TGG | - | chr4.2:15023779-15023798 | None:intergenic | 35.0% | |
| CACGAAAACCACAAAATAGA+GGG | - | chr4.2:15026003-15026022 | None:intergenic | 35.0% | |
| CATATCTTGCTCTCAAATAG+AGG | + | chr4.2:15025097-15025116 | MS.gene09187:intron | 35.0% | |
| CCTATCTTAACAACATGTGT+GGG | - | chr4.2:15024149-15024168 | None:intergenic | 35.0% | |
| CCTCTTATAGTGAATACTTC+TGG | + | chr4.2:15023921-15023940 | MS.gene09187:CDS | 35.0% | |
| CGAATCTTTATGCTTGCAAT+GGG | - | chr4.2:15024535-15024554 | None:intergenic | 35.0% | |
| CGAGATAGATTCAGTTCTTA+AGG | + | chr4.2:15024256-15024275 | MS.gene09187:CDS | 35.0% | |
| CGTAGAATATTTCAGAGCTT+GGG | - | chr4.2:15024961-15024980 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr4.2:15026909-15026928 | None:intergenic | 35.0% | |
| CTGGAATATTGTATACATGC+TGG | - | chr4.2:15025414-15025433 | None:intergenic | 35.0% | |
| CTGGATATCATTCAAACTCT+CGG | + | chr4.2:15026278-15026297 | MS.gene09187:intron | 35.0% | |
| CTTACAGCATCTTCAAAAAC+AGG | - | chr4.2:15023576-15023595 | None:intergenic | 35.0% | |
| CTTACCTGCAATAAACAAGT+AGG | - | chr4.2:15027104-15027123 | None:intergenic | 35.0% | |
| CTTGAGAAGAGTTCATAAAG+AGG | + | chr4.2:15026862-15026881 | MS.gene09187:intron | 35.0% | |
| GACTAAATCCGATGATGTTT+GGG | + | chr4.2:15025225-15025244 | MS.gene09187:intron | 35.0% | |
| GATGACATATCTGAATCACT+AGG | - | chr4.2:15024463-15024482 | None:intergenic | 35.0% | |
| GCTAGTTAGGTTAAGATAGT+TGG | + | chr4.2:15023316-15023335 | MS.gene09187:intron | 35.0% | |
| GGATGAAAATATCTGGTGAA+GGG | - | chr4.2:15022786-15022805 | None:intergenic | 35.0% | |
| GGTATTTATTGTCTGTTTGC+AGG | + | chr4.2:15023655-15023674 | MS.gene09187:intron | 35.0% | |
| GTCGAACTGTCAAAACATTA+GGG | + | chr4.2:15023369-15023388 | MS.gene09187:intron | 35.0% | |
| GTTAGAGAGATTAAACCAAG+AGG | - | chr4.2:15022994-15023013 | None:intergenic | 35.0% | |
| GTTCAAATAAGACTTGGATC+AGG | - | chr4.2:15023705-15023724 | None:intergenic | 35.0% | |
| TAAAGATCATCCGTGAAGAT+TGG | - | chr4.2:15025655-15025674 | None:intergenic | 35.0% | |
| TAAATACCTTCATCAGCTTG+AGG | - | chr4.2:15025385-15025404 | None:intergenic | 35.0% | |
| TAATTTCATGTCATCTGCCA+TGG | + | chr4.2:15027328-15027347 | MS.gene09187:intron | 35.0% | |
| TAGATTCAGTTCTTAAGGAC+CGG | + | chr4.2:15024261-15024280 | MS.gene09187:CDS | 35.0% | |
| TATATATGAGTATCAGGTCG+AGG | + | chr4.2:15027540-15027559 | MS.gene09187:intron | 35.0% | |
| TATTGTATACATGCTGGGAA+TGG | - | chr4.2:15025408-15025427 | None:intergenic | 35.0% | |
| TCGAATCTTTATGCTTGCAA+TGG | - | chr4.2:15024536-15024555 | None:intergenic | 35.0% | |
| TCTATATACAGTGAAGTGGA+TGG | + | chr4.2:15023634-15023653 | MS.gene09187:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr4.2:15026138-15026157 | None:intergenic | 35.0% | |
| TGAAGATTGGAAGATCACAT+AGG | - | chr4.2:15025642-15025661 | None:intergenic | 35.0% | |
| TGACTAAATCCGATGATGTT+TGG | + | chr4.2:15025224-15025243 | MS.gene09187:intron | 35.0% | |
| TGCATAACTAGAAGATCAGA+TGG | - | chr4.2:15026684-15026703 | None:intergenic | 35.0% | |
| TGGGATTTACTAACTGACTA+AGG | + | chr4.2:15025244-15025263 | MS.gene09187:intron | 35.0% | |
| TGGTTGCTAATAGGAGATTA+AGG | - | chr4.2:15022918-15022937 | None:intergenic | 35.0% | |
| TTATAGTGAATACTTCTGGC+TGG | + | chr4.2:15023925-15023944 | MS.gene09187:CDS | 35.0% | |
| TTATCACGACAAAGTCTCAT+TGG | + | chr4.2:15025611-15025630 | MS.gene09187:intron | 35.0% | |
| TTGCTGATGTACTTACCAAA+GGG | - | chr4.2:15025454-15025473 | None:intergenic | 35.0% | |
| ! | AACACTGATGGATCTATCTT+AGG | - | chr4.2:15023813-15023832 | None:intergenic | 35.0% |
| ! | ACATACTCTAAGAACACTGA+TGG | - | chr4.2:15023825-15023844 | None:intergenic | 35.0% |
| ! | AGTTGATGCTTGTAACTTGA+TGG | + | chr4.2:15024633-15024652 | MS.gene09187:intron | 35.0% |
| ! | ATAAGCTACTTTCTTGCATC+TGG | - | chr4.2:15022938-15022957 | None:intergenic | 35.0% |
| ! | CAAGATATGACGACACATTT+TGG | - | chr4.2:15025086-15025105 | None:intergenic | 35.0% |
| ! | CATAACAGGTCTCTTTTCTT+TGG | + | chr4.2:15023777-15023796 | MS.gene09187:intron | 35.0% |
| ! | CTCTACTTGTTAAGTTGTGA+TGG | + | chr4.2:15023236-15023255 | MS.gene09187:intron | 35.0% |
| ! | CTGGAAAATTCTGGTTAGAT+GGG | + | chr4.2:15024207-15024226 | MS.gene09187:CDS | 35.0% |
| ! | GTGGTGTCAAACATTAGAAA+AGG | + | chr4.2:15027258-15027277 | MS.gene09187:intron | 35.0% |
| ! | TATAGTGAATACTTCTGGCT+GGG | + | chr4.2:15023926-15023945 | MS.gene09187:CDS | 35.0% |
| ! | TCATCTGGGATGAAAATATC+TGG | - | chr4.2:15022793-15022812 | None:intergenic | 35.0% |
| ! | TGGAAAATTCTGGTTAGATG+GGG | + | chr4.2:15024208-15024227 | MS.gene09187:CDS | 35.0% |
| !! | ATACGTTTGTTGGCTTTAAC+GGG | + | chr4.2:15026495-15026514 | MS.gene09187:intron | 35.0% |
| !! | CATACGTTTGTTGGCTTTAA+CGG | + | chr4.2:15026494-15026513 | MS.gene09187:intron | 35.0% |
| !! | CCAAGCTCTGAAATATTCTA+CGG | + | chr4.2:15024959-15024978 | MS.gene09187:CDS | 35.0% |
| !! | CCAGAAGTATTCACTATAAG+AGG | - | chr4.2:15023924-15023943 | None:intergenic | 35.0% |
| !! | CTCTAAAATTATAAAGGGGC+AGG | - | chr4.2:15027371-15027390 | None:intergenic | 35.0% |
| !! | GATTTTTGTTTACGAGGCAT+TGG | - | chr4.2:15026038-15026057 | None:intergenic | 35.0% |
| !!! | TGACGACACATTTTGGAATT+TGG | - | chr4.2:15025079-15025098 | None:intergenic | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr4.2:15026137-15026156 | MS.gene09187:intron | 35.0% |
| !!! | TTGGTTTTGTCTTGCATTTC+AGG | + | chr4.2:15024080-15024099 | MS.gene09187:intron | 35.0% |
| AAAAGTCAACCTCTTGCTAC+AGG | + | chr4.2:15027064-15027083 | MS.gene09187:CDS | 40.0% | |
| AAAGTCAACCTCTTGCTACA+GGG | + | chr4.2:15027065-15027084 | MS.gene09187:CDS | 40.0% | |
| AATACCTTCATCAGCTTGAG+GGG | - | chr4.2:15025383-15025402 | None:intergenic | 40.0% | |
| AATCTTTGGGCTTAGAGAAG+AGG | - | chr4.2:15027623-15027642 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr4.2:15026144-15026163 | None:intergenic | 40.0% | |
| ACTCCCTATGTAAACACACA+GGG | - | chr4.2:15025482-15025501 | None:intergenic | 40.0% | |
| AGAAAACTTGGAAAGTGGAC+TGG | - | chr4.2:15025510-15025529 | None:intergenic | 40.0% | |
| AGCCAACAATACTAGCATTC+AGG | - | chr4.2:15024985-15025004 | None:intergenic | 40.0% | |
| ATAAGGACAGTGAGATGTCA+AGG | - | chr4.2:15024506-15024525 | None:intergenic | 40.0% | |
| CAAACTGAGTTTACTCCTCT+TGG | + | chr4.2:15022976-15022995 | MS.gene09187:CDS | 40.0% | |
| CAAGAGGAGTAAACTCAGTT+TGG | - | chr4.2:15022978-15022997 | None:intergenic | 40.0% | |
| CACATAAACTACTGCTTTCC+TGG | + | chr4.2:15024021-15024040 | MS.gene09187:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr4.2:15026143-15026162 | None:intergenic | 40.0% | |
| CATTAGAATCCAAATGTCGG+AGG | - | chr4.2:15026235-15026254 | None:intergenic | 40.0% | |
| CCCACACATGTTGTTAAGAT+AGG | + | chr4.2:15024146-15024165 | MS.gene09187:CDS | 40.0% | |
| CCGTAGAATATTTCAGAGCT+TGG | - | chr4.2:15024962-15024981 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr4.2:15026112-15026131 | None:intergenic | 40.0% | |
| CTTGCAATGGGAACTTGATA+AGG | - | chr4.2:15024523-15024542 | None:intergenic | 40.0% | |
| CTTGCTGATGTACTTACCAA+AGG | - | chr4.2:15025455-15025474 | None:intergenic | 40.0% | |
| GAAGATGCTGTAAGACTCTA+AGG | + | chr4.2:15023582-15023601 | MS.gene09187:intron | 40.0% | |
| GAGAAGAGTTCATAAAGAGG+AGG | + | chr4.2:15026865-15026884 | MS.gene09187:intron | 40.0% | |
| GAGGAAACAAAGACATCTCA+AGG | - | chr4.2:15027604-15027623 | None:intergenic | 40.0% | |
| GAGTGTTATCTATCCGATGT+GGG | - | chr4.2:15026843-15026862 | None:intergenic | 40.0% | |
| GATAGTTGGTTACTATTGGG+GGG | + | chr4.2:15023330-15023349 | MS.gene09187:intron | 40.0% | |
| GATCCAAAACAGAACACCTA+TGG | + | chr4.2:15025147-15025166 | MS.gene09187:intron | 40.0% | |
| GATTGGAAGATCACATAGGA+TGG | - | chr4.2:15025638-15025657 | None:intergenic | 40.0% | |
| GCACGAAAACCACAAAATAG+AGG | - | chr4.2:15026004-15026023 | None:intergenic | 40.0% | |
| GCCTATCTTAACAACATGTG+TGG | - | chr4.2:15024150-15024169 | None:intergenic | 40.0% | |
| GGCACACAAAAAACACCAAA+AGG | + | chr4.2:15026310-15026329 | MS.gene09187:intron | 40.0% | |
| GGGATGAAAATATCTGGTGA+AGG | - | chr4.2:15022787-15022806 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | - | chr4.2:15026188-15026207 | None:intergenic | 40.0% | |
| GTTGTTTACGAAGTTACTCC+AGG | + | chr4.2:15023015-15023034 | MS.gene09187:CDS | 40.0% | |
| TAATGGCTAGAAAACCTACC+TGG | - | chr4.2:15023036-15023055 | None:intergenic | 40.0% | |
| TACTCCCTATGTAAACACAC+AGG | - | chr4.2:15025483-15025502 | None:intergenic | 40.0% | |
| TAGGAGATTAAGGAGATAGC+GGG | - | chr4.2:15022908-15022927 | None:intergenic | 40.0% | |
| TCAAACTCTCGGTATCATTG+AGG | + | chr4.2:15026289-15026308 | MS.gene09187:intron | 40.0% | |
| TCTTGCATCTGGTTGCTAAT+AGG | - | chr4.2:15022927-15022946 | None:intergenic | 40.0% | |
| TGACCCTGTGTGTTTACATA+GGG | + | chr4.2:15025476-15025495 | MS.gene09187:intron | 40.0% | |
| TGAGCTACCCTTTATATGCT+TGG | + | chr4.2:15024751-15024770 | MS.gene09187:intron | 40.0% | |
| TGGAAATTCCGCCTTAATTG+CGG | + | chr4.2:15026723-15026742 | MS.gene09187:intron | 40.0% | |
| TGGTCAAGGCTATTCTATTG+TGG | - | chr4.2:15027688-15027707 | None:intergenic | 40.0% | |
| TTAGAATCCAAATGTCGGAG+GGG | - | chr4.2:15026233-15026252 | None:intergenic | 40.0% | |
| TTAGCCAAAGTAGTCCACAT+AGG | + | chr4.2:15025672-15025691 | MS.gene09187:intron | 40.0% | |
| TTCAGAGAAACAAATGGCAC+AGG | - | chr4.2:15027044-15027063 | None:intergenic | 40.0% | |
| TTCAGATATGTCATCGGACA+AGG | + | chr4.2:15024468-15024487 | MS.gene09187:CDS | 40.0% | |
| TTCGAGTGATAAGGCTGTTT+AGG | - | chr4.2:15024674-15024693 | None:intergenic | 40.0% | |
| TTGACCCTGTGTGTTTACAT+AGG | + | chr4.2:15025475-15025494 | MS.gene09187:intron | 40.0% | |
| TTGCAATGAAGGCTAACCAA+AGG | - | chr4.2:15026775-15026794 | None:intergenic | 40.0% | |
| TTGTGACACAGGAATTGTGA+GGG | + | chr4.2:15026980-15026999 | MS.gene09187:intron | 40.0% | |
| TTTACGAAGTTACTCCAGGT+AGG | + | chr4.2:15023019-15023038 | MS.gene09187:intron | 40.0% | |
| ! | AACCCATAGGTGTTCTGTTT+TGG | - | chr4.2:15025153-15025172 | None:intergenic | 40.0% |
| ! | AATACTTCTGGCTGGGTTAA+AGG | + | chr4.2:15023933-15023952 | MS.gene09187:CDS | 40.0% |
| ! | AATGCCTATGTGGACTACTT+TGG | - | chr4.2:15025679-15025698 | None:intergenic | 40.0% |
| ! | AGAGTGTTATCTATCCGATG+TGG | - | chr4.2:15026844-15026863 | None:intergenic | 40.0% |
| ! | AGATGGTAACGCGTAAGATT+TGG | - | chr4.2:15024292-15024311 | None:intergenic | 40.0% |
| ! | CACACAACTTTCGAGTGATA+AGG | - | chr4.2:15024683-15024702 | None:intergenic | 40.0% |
| ! | GATGGTAACGCGTAAGATTT+GGG | - | chr4.2:15024291-15024310 | None:intergenic | 40.0% |
| ! | GCTGGAAAATTCTGGTTAGA+TGG | + | chr4.2:15024206-15024225 | MS.gene09187:CDS | 40.0% |
| ! | GTTGAAGACCCTCTATTTTG+TGG | + | chr4.2:15025992-15026011 | MS.gene09187:intron | 40.0% |
| ! | TCCTTTTGAACAAACTCCCT+GGG | - | chr4.2:15024388-15024407 | None:intergenic | 40.0% |
| ! | TCTAACCAGAATTTTCCAGC+AGG | - | chr4.2:15024206-15024225 | None:intergenic | 40.0% |
| ! | TGTTTGGGGTTTGTGTTAGA+AGG | + | chr4.2:15027492-15027511 | MS.gene09187:intron | 40.0% |
| ! | TTGTCTTGCATTTCAGGTGT+TGG | + | chr4.2:15024086-15024105 | MS.gene09187:intron | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr4.2:15026907-15026926 | MS.gene09187:intron | 40.0% |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | + | chr4.2:15026805-15026824 | MS.gene09187:intron | 40.0% |
| !! | GTGTGATCGGCTTTAAAGAT+TGG | - | chr4.2:15026650-15026669 | None:intergenic | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | + | chr4.2:15026806-15026825 | MS.gene09187:intron | 40.0% |
| AAACTCAGTTTGGCCAACGT+CGG | - | chr4.2:15022968-15022987 | None:intergenic | 45.0% | |
| AAGTACCTGGAGATTTACCC+TGG | + | chr4.2:15025020-15025039 | MS.gene09187:CDS | 45.0% | |
| ATACCTTCATCAGCTTGAGG+GGG | - | chr4.2:15025382-15025401 | None:intergenic | 45.0% | |
| CAAGTTACCTACCAAGACCA+AGG | - | chr4.2:15025048-15025067 | None:intergenic | 45.0% | |
| CAGCTTGTGACCATTCATCT+GGG | - | chr4.2:15022807-15022826 | None:intergenic | 45.0% | |
| CCTCAAAGCCAACACAATGA+AGG | - | chr4.2:15026807-15026826 | None:intergenic | 45.0% | |
| CTCCAACACCTTCATTGTGT+TGG | + | chr4.2:15026796-15026815 | MS.gene09187:intron | 45.0% | |
| CTTGTGACACAGGAATTGTG+AGG | + | chr4.2:15026979-15026998 | MS.gene09187:intron | 45.0% | |
| CTTTCCTAAGTTCTCCACAG+CGG | + | chr4.2:15024717-15024736 | MS.gene09187:intron | 45.0% | |
| GATTCGACATGTTCATCGTG+AGG | + | chr4.2:15024549-15024568 | MS.gene09187:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr4.2:15026113-15026132 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr4.2:15026116-15026135 | None:intergenic | 45.0% | |
| GCTTATCTTGATACCGACGT+TGG | + | chr4.2:15022952-15022971 | MS.gene09187:CDS | 45.0% | |
| GGACGTTTGATACCTTGCAA+AGG | - | chr4.2:15026581-15026600 | None:intergenic | 45.0% | |
| GGCCTGAATGCTAGTATTGT+TGG | + | chr4.2:15024980-15024999 | MS.gene09187:CDS | 45.0% | |
| GGCTGTATGATCTGTGTGAT+CGG | - | chr4.2:15026663-15026682 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr4.2:15026182-15026201 | None:intergenic | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr4.2:15026181-15026200 | None:intergenic | 45.0% | |
| TGGTTAGATGGGGAAGATGA+TGG | + | chr4.2:15024218-15024237 | MS.gene09187:CDS | 45.0% | |
| TGTGACACAGGAATTGTGAG+GGG | + | chr4.2:15026981-15027000 | MS.gene09187:intron | 45.0% | |
| TTCCAGAACATGGTACTGCT+TGG | + | chr4.2:15025428-15025447 | MS.gene09187:intron | 45.0% | |
| TTTGTTCTGTGACGCTGCAT+TGG | + | chr4.2:15025560-15025579 | MS.gene09187:intron | 45.0% | |
| ! | AAGGCATCACTACCTTTGCA+AGG | + | chr4.2:15026566-15026585 | MS.gene09187:intron | 45.0% |
| ! | AGCCAACACAATGAAGGTGT+TGG | - | chr4.2:15026801-15026820 | None:intergenic | 45.0% |
| ! | CACATAGGCATTTTGTGCTG+CGG | + | chr4.2:15025687-15025706 | MS.gene09187:intron | 45.0% |
| ! | CAGGGAGTTTGTTCAAAAGG+AGG | + | chr4.2:15024387-15024406 | MS.gene09187:intron | 45.0% |
| ! | CCTTTTGAACAAACTCCCTG+GGG | - | chr4.2:15024387-15024406 | None:intergenic | 45.0% |
| ! | CTCCTTTTGAACAAACTCCC+TGG | - | chr4.2:15024389-15024408 | None:intergenic | 45.0% |
| ! | GCAGTTGAATCTGAAGTACC+TGG | + | chr4.2:15025007-15025026 | MS.gene09187:CDS | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr4.2:15026148-15026167 | MS.gene09187:intron | 45.0% |
| ! | TTGTGGTTTTCGTGCCTAGA+AGG | + | chr4.2:15026009-15026028 | MS.gene09187:intron | 45.0% |
| !! | AATTGTGAGGGGCATTGACA+CGG | + | chr4.2:15026992-15027011 | MS.gene09187:CDS | 45.0% |
| !! | ACTATTGGGGGGTGTGTTTT+TGG | + | chr4.2:15023341-15023360 | MS.gene09187:intron | 45.0% |
| !! | AGGCGTTGAACTGGATACAA+TGG | - | chr4.2:15022836-15022855 | None:intergenic | 45.0% |
| !! | CAAAACCGGCTTGTAAGGTT+AGG | - | chr4.2:15026895-15026914 | None:intergenic | 45.0% |
| !! | CAACACAATGAAGGTGTTGG+AGG | - | chr4.2:15026798-15026817 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr4.2:15026900-15026919 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr4.2:15026897-15026916 | MS.gene09187:intron | 45.0% |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | + | chr4.2:15026804-15026823 | MS.gene09187:intron | 45.0% |
| !! | GTTGATTTGCCAACACTTCC+AGG | - | chr4.2:15022880-15022899 | None:intergenic | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | + | chr4.2:15026807-15026826 | MS.gene09187:intron | 45.0% |
| !!! | AATTTTTATCTTTTTATTTT+TGG | - | chr4.2:15025920-15025939 | None:intergenic | 5.0% |
| AAATGTCGGAGGGGTAACCT+TGG | - | chr4.2:15026224-15026243 | None:intergenic | 50.0% | |
| AAGGTTACCCCTCCGACATT+TGG | + | chr4.2:15026223-15026242 | MS.gene09187:intron | 50.0% | |
| AGGATTCCTTACGCATGGTC+TGG | + | chr4.2:15026078-15026097 | MS.gene09187:intron | 50.0% | |
| AGGTCCACAAACGAGTACGA+CGG | - | chr4.2:15022860-15022879 | None:intergenic | 50.0% | |
| AGTTCGCAACACTACTGCCA+CGG | - | chr4.2:15025971-15025990 | None:intergenic | 50.0% | |
| ATCTGCCATGGGTCTGTTGT+TGG | + | chr4.2:15027340-15027359 | MS.gene09187:intron | 50.0% | |
| ATGGAAGACTTCAGAGCGAG+GGG | - | chr4.2:15023469-15023488 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr4.2:15026204-15026223 | MS.gene09187:intron | 50.0% | |
| CGACATGTTCATCGTGAGGT+TGG | + | chr4.2:15024553-15024572 | MS.gene09187:intron | 50.0% | |
| CGCAGCACAAAATGCCTATG+TGG | - | chr4.2:15025689-15025708 | None:intergenic | 50.0% | |
| CGCGTAAGATTTGGGCTTAC+CGG | - | chr4.2:15024283-15024302 | None:intergenic | 50.0% | |
| CGCTGTGGAGAACTTAGGAA+AGG | - | chr4.2:15024719-15024738 | None:intergenic | 50.0% | |
| GATGGAAGACTTCAGAGCGA+GGG | - | chr4.2:15023470-15023489 | None:intergenic | 50.0% | |
| GCACTCCTAACCTTACAAGC+CGG | + | chr4.2:15026887-15026906 | MS.gene09187:intron | 50.0% | |
| GCAGCTTGTGACCATTCATC+TGG | - | chr4.2:15022808-15022827 | None:intergenic | 50.0% | |
| GGATATCACCCTGTAGCAAG+AGG | - | chr4.2:15027076-15027095 | None:intergenic | 50.0% | |
| GGATTCCTTACGCATGGTCT+GGG | + | chr4.2:15026079-15026098 | MS.gene09187:intron | 50.0% | |
| GGGGTTTGTGTTAGAAGGAG+TGG | + | chr4.2:15027497-15027516 | MS.gene09187:intron | 50.0% | |
| GGTAGGTGCCCATGAATAGT+CGG | + | chr4.2:15025708-15025727 | MS.gene09187:intron | 50.0% | |
| TAGTCCCAACAACAGACCCA+TGG | - | chr4.2:15027348-15027367 | None:intergenic | 50.0% | |
| TCTGCCATGGGTCTGTTGTT+GGG | + | chr4.2:15027341-15027360 | MS.gene09187:intron | 50.0% | |
| TTAAGTGAACGGCGTAGTGG+TGG | - | chr4.2:15027708-15027727 | None:intergenic | 50.0% | |
| ! | CCCCAGGGAGTTTGTTCAAA+AGG | + | chr4.2:15024384-15024403 | MS.gene09187:intron | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | + | chr4.2:15026827-15026846 | MS.gene09187:intron | 50.0% |
| ! | GGTGTTGGAGGTTGCAATGA+AGG | - | chr4.2:15026786-15026805 | None:intergenic | 50.0% |
| ! | GTTTGTGGACCTGGAAGTGT+TGG | + | chr4.2:15022868-15022887 | MS.gene09187:CDS | 50.0% |
| ! | TAGGCATTTTGTGCTGCGGT+AGG | + | chr4.2:15025691-15025710 | MS.gene09187:intron | 50.0% |
| !! | ATTAAGGAGATAGCGGGCGA+AGG | - | chr4.2:15022902-15022921 | None:intergenic | 50.0% |
| !! | CGCGTGTACCGACTATTCAT+GGG | - | chr4.2:15025719-15025738 | None:intergenic | 50.0% |
| !! | TCGCGTGTACCGACTATTCA+TGG | - | chr4.2:15025720-15025739 | None:intergenic | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr4.2:15026169-15026188 | None:intergenic | 55.0% | |
| AGGCACCAGGGTAAATCTCC+AGG | - | chr4.2:15025028-15025047 | None:intergenic | 55.0% | |
| CATGGTACTGCTTGGCCCTT+TGG | + | chr4.2:15025436-15025455 | MS.gene09187:intron | 55.0% | |
| CCTTACGCATGGTCTGGGAA+GGG | + | chr4.2:15026084-15026103 | MS.gene09187:intron | 55.0% | |
| CTAGGGGCAGACCGCAATTA+AGG | - | chr4.2:15026737-15026756 | None:intergenic | 55.0% | |
| CTTACGCATGGTCTGGGAAG+GGG | + | chr4.2:15026085-15026104 | MS.gene09187:intron | 55.0% | |
| GACTCCGCTGTGGAGAACTT+AGG | - | chr4.2:15024724-15024743 | None:intergenic | 55.0% | |
| GGAGATTTACCCTGGTGCCT+TGG | + | chr4.2:15025028-15025047 | MS.gene09187:CDS | 55.0% | |
| GGATGGAAGACTTCAGAGCG+AGG | - | chr4.2:15023471-15023490 | None:intergenic | 55.0% | |
| GGCCAAGCAGTACCATGTTC+TGG | - | chr4.2:15025433-15025452 | None:intergenic | 55.0% | |
| GGTCCACAAACGAGTACGAC+GGG | - | chr4.2:15022859-15022878 | None:intergenic | 55.0% | |
| GTCGTACTCGTTTGTGGACC+TGG | + | chr4.2:15022859-15022878 | MS.gene09187:CDS | 55.0% | |
| TCAGTCACAAGACTCCGCTG+TGG | - | chr4.2:15024734-15024753 | None:intergenic | 55.0% | |
| TCCTTACGCATGGTCTGGGA+AGG | + | chr4.2:15026083-15026102 | MS.gene09187:intron | 55.0% | |
| TTACCCTGGTGCCTTGGTCT+TGG | + | chr4.2:15025034-15025053 | MS.gene09187:CDS | 55.0% | |
| ! | CTACCAAGACCAAGGCACCA+GGG | - | chr4.2:15025040-15025059 | None:intergenic | 55.0% |
| !! | AGGGGCATTGACACGGTCAA+AGG | + | chr4.2:15026999-15027018 | MS.gene09187:CDS | 55.0% |
| !! | CGAGGCATTGGAAGCCTTCT+AGG | - | chr4.2:15026026-15026045 | None:intergenic | 55.0% |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | + | chr4.2:15026810-15026829 | MS.gene09187:intron | 55.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr4.2:15026215-15026234 | None:intergenic | 60.0% | |
| CCACAAACGAGTACGACGGG+AGG | - | chr4.2:15022856-15022875 | None:intergenic | 60.0% | |
| CCCTTCCCAGACCATGCGTA+AGG | - | chr4.2:15026087-15026106 | None:intergenic | 60.0% | |
| CCTCCCGTCGTACTCGTTTG+TGG | + | chr4.2:15022853-15022872 | MS.gene09187:CDS | 60.0% | |
| GAACGGCGTAGTGGTGGTCA+AGG | - | chr4.2:15027702-15027721 | None:intergenic | 60.0% | |
| GCTCCCCCTCAAGCTGATGA+AGG | + | chr4.2:15025376-15025395 | MS.gene09187:intron | 60.0% | |
| GGGGCAGACCGCAATTAAGG+CGG | - | chr4.2:15026734-15026753 | None:intergenic | 60.0% | |
| TCGGTACACGCGAGAGCCTA+AGG | + | chr4.2:15025727-15025746 | MS.gene09187:intron | 60.0% | |
| TGGGAAGGGGTCCCACCATT+TGG | + | chr4.2:15026098-15026117 | MS.gene09187:intron | 60.0% | |
| ! | CCTACCAAGACCAAGGCACC+AGG | - | chr4.2:15025041-15025060 | None:intergenic | 60.0% |
| !! | CCTGGTGCCTTGGTCTTGGT+AGG | + | chr4.2:15025038-15025057 | MS.gene09187:intron | 60.0% |
| !! | TACGACGGGAGGCGTTGAAC+TGG | - | chr4.2:15022845-15022864 | None:intergenic | 60.0% |
| AAGGAGGCTCGTCTCCTGCG+TGG | + | chr4.2:15024403-15024422 | MS.gene09187:CDS | 65.0% | |
| CCACTATCCGTTCGCCACGC+AGG | - | chr4.2:15024420-15024439 | None:intergenic | 65.0% | |
| CCTGCGTGGCGAACGGATAG+TGG | + | chr4.2:15024417-15024436 | MS.gene09187:CDS | 65.0% | |
| CTCGTCTCCTGCGTGGCGAA+CGG | + | chr4.2:15024410-15024429 | MS.gene09187:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 15022772 | 15027727 | 15022772 | ID=MS.gene09187 |
| chr4.2 | mRNA | 15022772 | 15027727 | 15022772 | ID=MS.gene09187.t1;Parent=MS.gene09187 |
| chr4.2 | exon | 15022772 | 15023036 | 15022772 | ID=MS.gene09187.t1.exon1;Parent=MS.gene09187.t1 |
| chr4.2 | CDS | 15022772 | 15023036 | 15022772 | ID=cds.MS.gene09187.t1;Parent=MS.gene09187.t1 |
| chr4.2 | exon | 15023129 | 15023162 | 15023129 | ID=MS.gene09187.t1.exon2;Parent=MS.gene09187.t1 |
| chr4.2 | CDS | 15023129 | 15023162 | 15023129 | ID=cds.MS.gene09187.t1;Parent=MS.gene09187.t1 |
| chr4.2 | exon | 15023785 | 15023954 | 15023785 | ID=MS.gene09187.t1.exon3;Parent=MS.gene09187.t1 |
| chr4.2 | CDS | 15023785 | 15023954 | 15023785 | ID=cds.MS.gene09187.t1;Parent=MS.gene09187.t1 |
| chr4.2 | exon | 15024102 | 15024282 | 15024102 | ID=MS.gene09187.t1.exon4;Parent=MS.gene09187.t1 |
| chr4.2 | CDS | 15024102 | 15024282 | 15024102 | ID=cds.MS.gene09187.t1;Parent=MS.gene09187.t1 |
| chr4.2 | exon | 15024390 | 15024570 | 15024390 | ID=MS.gene09187.t1.exon5;Parent=MS.gene09187.t1 |
| chr4.2 | CDS | 15024390 | 15024570 | 15024390 | ID=cds.MS.gene09187.t1;Parent=MS.gene09187.t1 |
| chr4.2 | exon | 15024956 | 15025055 | 15024956 | ID=MS.gene09187.t1.exon6;Parent=MS.gene09187.t1 |
| chr4.2 | CDS | 15024956 | 15025055 | 15024956 | ID=cds.MS.gene09187.t1;Parent=MS.gene09187.t1 |
| chr4.2 | exon | 15026991 | 15027118 | 15026991 | ID=MS.gene09187.t1.exon7;Parent=MS.gene09187.t1 |
| chr4.2 | CDS | 15026991 | 15027118 | 15026991 | ID=cds.MS.gene09187.t1;Parent=MS.gene09187.t1 |
| chr4.2 | exon | 15027674 | 15027727 | 15027674 | ID=MS.gene09187.t1.exon8;Parent=MS.gene09187.t1 |
| chr4.2 | CDS | 15027674 | 15027727 | 15027674 | ID=cds.MS.gene09187.t1;Parent=MS.gene09187.t1 |
| Gene Sequence |
| Protein sequence |
