Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08260.t1 | RHN42449.1 | 94.6 | 353 | 19 | 0 | 1 | 353 | 1 | 353 | 1.40E-191 | 678.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08260.t1 | Q8VYP6 | 54.4 | 351 | 144 | 8 | 10 | 353 | 10 | 351 | 7.7e-101 | 368.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08260.t1 | A0A072TT04 | 94.6 | 353 | 19 | 0 | 1 | 353 | 1 | 353 | 1.0e-191 | 678.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene08260 | -0.827243 | 1.74E-54 | -1.69E-46 |
| MS.gene04917 | MS.gene08260 | -0.822938 | 1.81E-53 | -1.69E-46 |
| MS.gene049438 | MS.gene08260 | -0.801945 | 7.09E-49 | -1.69E-46 |
| MS.gene04991 | MS.gene08260 | 0.822244 | 2.63E-53 | -1.69E-46 |
| MS.gene050762 | MS.gene08260 | -0.821991 | 3.01E-53 | -1.69E-46 |
| MS.gene050763 | MS.gene08260 | -0.821481 | 3.95E-53 | -1.69E-46 |
| MS.gene050941 | MS.gene08260 | -0.813539 | 2.43E-51 | -1.69E-46 |
| MS.gene051631 | MS.gene08260 | 0.83221 | 1.08E-55 | -1.69E-46 |
| MS.gene05344 | MS.gene08260 | 0.807704 | 4.44E-50 | -1.69E-46 |
| MS.gene054379 | MS.gene08260 | -0.817338 | 3.47E-52 | -1.69E-46 |
| MS.gene055880 | MS.gene08260 | 0.800647 | 1.31E-48 | -1.69E-46 |
| MS.gene060869 | MS.gene08260 | -0.800006 | 1.76E-48 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08260.t1 | MTR_8g080140 | 94.618 | 353 | 19 | 0 | 1 | 353 | 1 | 353 | 0.0 | 682 |
| MS.gene08260.t1 | MTR_8g080150 | 68.347 | 357 | 105 | 4 | 1 | 353 | 1 | 353 | 2.95e-172 | 484 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08260.t1 | AT5G11010 | 54.416 | 351 | 144 | 8 | 10 | 353 | 10 | 351 | 4.11e-127 | 369 |
| MS.gene08260.t1 | AT5G11010 | 54.416 | 351 | 144 | 8 | 10 | 353 | 10 | 351 | 4.11e-127 | 369 |
| MS.gene08260.t1 | AT5G11010 | 54.416 | 351 | 144 | 8 | 10 | 353 | 10 | 351 | 4.11e-127 | 369 |
| MS.gene08260.t1 | AT5G11010 | 52.104 | 309 | 132 | 8 | 10 | 311 | 10 | 309 | 5.33e-105 | 311 |
Find 87 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATAAACAAGTAGGAATT+TGG | 0.234721 | 4.1:-15480500 | None:intergenic |
| AATACTTCTGGCTGGGTTAA+AGG | 0.244134 | 4.1:+15477339 | MS.gene08260:CDS |
| ATTTACCTGCTGGAAAATTC+TGG | 0.277149 | 4.1:+15477604 | MS.gene08260:CDS |
| TCTTGCATCTGGTTGCTAAT+AGG | 0.301989 | 4.1:-15476319 | None:intergenic |
| AATTCCTACTTGTTTATTGC+AGG | 0.309415 | 4.1:+15480503 | MS.gene08260:CDS |
| CGAGATAGATTCAGTTCTTA+AGG | 0.329341 | 4.1:+15477662 | MS.gene08260:CDS |
| CAAACTGAGTTTACTCCTCT+TGG | 0.341189 | 4.1:+15476371 | MS.gene08260:CDS |
| GCTGGAAAATTCTGGTTAGA+TGG | 0.341592 | 4.1:+15477612 | MS.gene08260:CDS |
| ATAAGCTACTTTCTTGCATC+TGG | 0.349894 | 4.1:-15476330 | None:intergenic |
| GCAGCTTGTGACCATTCATC+TGG | 0.352128 | 4.1:-15476200 | None:intergenic |
| CCCCAGGGAGTTTGTTCAAA+AGG | 0.361346 | 4.1:+15477790 | MS.gene08260:intron |
| GTTGATTTGCCAACACTTCC+AGG | 0.361840 | 4.1:-15476272 | None:intergenic |
| AGTACTTGAAACCATCAAAA+AGG | 0.368009 | 4.1:+15476547 | MS.gene08260:CDS |
| TGGTTGCTAATAGGAGATTA+AGG | 0.374760 | 4.1:-15476310 | None:intergenic |
| AACACTGATGGATCTATCTT+AGG | 0.381453 | 4.1:-15477216 | None:intergenic |
| CCCACACATGTTGTTAAGAT+AGG | 0.383733 | 4.1:+15477552 | MS.gene08260:CDS |
| CCTCTTATAGTGAATACTTC+TGG | 0.384908 | 4.1:+15477327 | MS.gene08260:CDS |
| TCATCTGGGATGAAAATATC+TGG | 0.385934 | 4.1:-15476185 | None:intergenic |
| AGCCAACAATACTAGCATTC+AGG | 0.392276 | 4.1:-15478388 | None:intergenic |
| TTACCCTGGTGCCTTGGTCT+TGG | 0.393880 | 4.1:+15478440 | MS.gene08260:CDS |
| GTCGTACTCGTTTGTGGACC+TGG | 0.396974 | 4.1:+15476254 | MS.gene08260:CDS |
| CCAGAAGTATTCACTATAAG+AGG | 0.406197 | 4.1:-15477327 | None:intergenic |
| GGCCTGAATGCTAGTATTGT+TGG | 0.412902 | 4.1:+15478386 | MS.gene08260:CDS |
| TTATAGTGAATACTTCTGGC+TGG | 0.413967 | 4.1:+15477331 | MS.gene08260:CDS |
| GTGGACATGCTAAAATATAT+TGG | 0.414066 | 4.1:+15477528 | MS.gene08260:CDS |
| CAAGAGGAGTAAACTCAGTT+TGG | 0.425282 | 4.1:-15476370 | None:intergenic |
| TACGACGGGAGGCGTTGAAC+TGG | 0.430588 | 4.1:-15476237 | None:intergenic |
| AAAAGTCAACCTCTTGCTAC+AGG | 0.438339 | 4.1:+15480470 | MS.gene08260:CDS |
| CCTGCGTGGCGAACGGATAG+TGG | 0.442876 | 4.1:+15477823 | MS.gene08260:CDS |
| CCGTAGAATATTTCAGAGCT+TGG | 0.444402 | 4.1:-15478365 | None:intergenic |
| CCTCCCGTCGTACTCGTTTG+TGG | 0.446281 | 4.1:+15476248 | MS.gene08260:CDS |
| GGAGATTTACCCTGGTGCCT+TGG | 0.462451 | 4.1:+15478434 | MS.gene08260:CDS |
| CGAATCTTTATGCTTGCAAT+GGG | 0.463513 | 4.1:-15477938 | None:intergenic |
| TGTTGGTTATGAAGTATTAG+TGG | 0.466461 | 4.1:+15477509 | MS.gene08260:CDS |
| CGTAGAATATTTCAGAGCTT+GGG | 0.466484 | 4.1:-15478364 | None:intergenic |
| CTGGAAAATTCTGGTTAGAT+GGG | 0.476615 | 4.1:+15477613 | MS.gene08260:CDS |
| CTTGCAATGGGAACTTGATA+AGG | 0.478521 | 4.1:-15477926 | None:intergenic |
| AAATTTAAGAATTTACCTGC+TGG | 0.484367 | 4.1:+15477594 | MS.gene08260:CDS |
| TTCAGAGAAACAAATGGCAC+AGG | 0.495894 | 4.1:-15480447 | None:intergenic |
| CTTACCTGCAATAAACAAGT+AGG | 0.503057 | 4.1:-15480507 | None:intergenic |
| CAGCTTGTGACCATTCATCT+GGG | 0.510594 | 4.1:-15476199 | None:intergenic |
| CTCGTCTCCTGCGTGGCGAA+CGG | 0.511504 | 4.1:+15477816 | MS.gene08260:CDS |
| TAGATTCAGTTCTTAAGGAC+CGG | 0.517139 | 4.1:+15477667 | MS.gene08260:CDS |
| TCGAATCTTTATGCTTGCAA+TGG | 0.517870 | 4.1:-15477939 | None:intergenic |
| TGGTTAGATGGGGAAGATGA+TGG | 0.521887 | 4.1:+15477624 | MS.gene08260:CDS |
| CTTAAATTTATAAAATTCAG+TGG | 0.522288 | 4.1:-15477580 | None:intergenic |
| TATAGTGAATACTTCTGGCT+GGG | 0.525760 | 4.1:+15477332 | MS.gene08260:CDS |
| CCTACCAAGACCAAGGCACC+AGG | 0.529524 | 4.1:-15478444 | None:intergenic |
| GTTGTTTACGAAGTTACTCC+AGG | 0.545994 | 4.1:+15476410 | MS.gene08260:CDS |
| CCAAGCTCTGAAATATTCTA+CGG | 0.547357 | 4.1:+15478365 | MS.gene08260:CDS |
| GCCTATCTTAACAACATGTG+TGG | 0.557846 | 4.1:-15477553 | None:intergenic |
| AGGCACCAGGGTAAATCTCC+AGG | 0.558138 | 4.1:-15478431 | None:intergenic |
| GCAGTTGAATCTGAAGTACC+TGG | 0.560619 | 4.1:+15478413 | MS.gene08260:CDS |
| TTCAGATATGTCATCGGACA+AGG | 0.564343 | 4.1:+15477874 | MS.gene08260:CDS |
| GGGATGAAAATATCTGGTGA+AGG | 0.564972 | 4.1:-15476179 | None:intergenic |
| TAGGAGATTAAGGAGATAGC+GGG | 0.565444 | 4.1:-15476300 | None:intergenic |
| AGGGGCATTGACACGGTCAA+AGG | 0.567190 | 4.1:+15480405 | MS.gene08260:CDS |
| GGTCCACAAACGAGTACGAC+GGG | 0.570389 | 4.1:-15476251 | None:intergenic |
| CTTGTGACACAGGAATTGTG+AGG | 0.582422 | 4.1:+15480385 | MS.gene08260:intron |
| ACATACTCTAAGAACACTGA+TGG | 0.583221 | 4.1:-15477228 | None:intergenic |
| GGATGAAAATATCTGGTGAA+GGG | 0.583452 | 4.1:-15476178 | None:intergenic |
| ATAAGGACAGTGAGATGTCA+AGG | 0.584321 | 4.1:-15477909 | None:intergenic |
| CCACTATCCGTTCGCCACGC+AGG | 0.585492 | 4.1:-15477823 | None:intergenic |
| TTGTGACACAGGAATTGTGA+GGG | 0.589012 | 4.1:+15480386 | MS.gene08260:intron |
| CAGGGAGTTTGTTCAAAAGG+AGG | 0.595105 | 4.1:+15477793 | MS.gene08260:intron |
| GGATATCACCCTGTAGCAAG+AGG | 0.602061 | 4.1:-15480479 | None:intergenic |
| ATTAAGGAGATAGCGGGCGA+AGG | 0.607891 | 4.1:-15476294 | None:intergenic |
| GATTCGACATGTTCATCGTG+AGG | 0.617943 | 4.1:+15477955 | MS.gene08260:CDS |
| AGGCGTTGAACTGGATACAA+TGG | 0.618822 | 4.1:-15476228 | None:intergenic |
| CCTATCTTAACAACATGTGT+GGG | 0.620818 | 4.1:-15477552 | None:intergenic |
| GCTTATCTTGATACCGACGT+TGG | 0.626457 | 4.1:+15476347 | MS.gene08260:CDS |
| AAGTACCTGGAGATTTACCC+TGG | 0.626705 | 4.1:+15478426 | MS.gene08260:CDS |
| GTTTGTGGACCTGGAAGTGT+TGG | 0.628940 | 4.1:+15476263 | MS.gene08260:CDS |
| TAGTGATTCAGATATGTCAT+CGG | 0.630930 | 4.1:+15477868 | MS.gene08260:CDS |
| AATTGTGAGGGGCATTGACA+CGG | 0.634135 | 4.1:+15480398 | MS.gene08260:CDS |
| AAAGTCAACCTCTTGCTACA+GGG | 0.642893 | 4.1:+15480471 | MS.gene08260:CDS |
| GTTAGAGAGATTAAACCAAG+AGG | 0.643471 | 4.1:-15476386 | None:intergenic |
| TGGAAAATTCTGGTTAGATG+GGG | 0.652558 | 4.1:+15477614 | MS.gene08260:CDS |
| ATAGGAGATTAAGGAGATAG+CGG | 0.661098 | 4.1:-15476301 | None:intergenic |
| AAGGAGGCTCGTCTCCTGCG+TGG | 0.674748 | 4.1:+15477809 | MS.gene08260:CDS |
| CCACAAACGAGTACGACGGG+AGG | 0.678624 | 4.1:-15476248 | None:intergenic |
| TGTGACACAGGAATTGTGAG+GGG | 0.679439 | 4.1:+15480387 | MS.gene08260:intron |
| GATGACATATCTGAATCACT+AGG | 0.681511 | 4.1:-15477866 | None:intergenic |
| CAAGTTACCTACCAAGACCA+AGG | 0.684244 | 4.1:-15478451 | None:intergenic |
| AGGTCCACAAACGAGTACGA+CGG | 0.697355 | 4.1:-15476252 | None:intergenic |
| AAACTCAGTTTGGCCAACGT+CGG | 0.697748 | 4.1:-15476360 | None:intergenic |
| CTACCAAGACCAAGGCACCA+GGG | 0.712305 | 4.1:-15478443 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTGTTTATTTTTATATAA+AGG | + | chr4.1:15478299-15478318 | MS.gene08260:intron | 10.0% |
| !! | CTTAAATTTATAAAATTCAG+TGG | - | chr4.1:15477583-15477602 | None:intergenic | 15.0% |
| !!! | AAAATATTTGAAATTCAAAG+TGG | - | chr4.1:15478199-15478218 | None:intergenic | 15.0% |
| !!! | TATTTGAAATTTCAAAAGAA+CGG | + | chr4.1:15476807-15476826 | MS.gene08260:intron | 15.0% |
| !! | AATAAAACCAAGCATATAAA+GGG | - | chr4.1:15478167-15478186 | None:intergenic | 20.0% |
| !! | AATAAATTTAAACTTCGATC+TGG | + | chr4.1:15479665-15479684 | MS.gene08260:intron | 20.0% |
| !! | GTAAAAATGAAGATTAAGAT+AGG | - | chr4.1:15476454-15476473 | None:intergenic | 20.0% |
| !! | TAATAACAATGAAATAGACT+AGG | - | chr4.1:15477015-15477034 | None:intergenic | 20.0% |
| !! | TACAAAATGTATGATTCAAA+AGG | - | chr4.1:15477398-15477417 | None:intergenic | 20.0% |
| !! | TATATGACATTCTTAATGAT+TGG | - | chr4.1:15476917-15476936 | None:intergenic | 20.0% |
| !! | TCTATATATACACAAGAATA+AGG | + | chr4.1:15478580-15478599 | MS.gene08260:intron | 20.0% |
| !!! | CTTTTGATAATGATCATAAA+TGG | - | chr4.1:15477259-15477278 | None:intergenic | 20.0% |
| !!! | TCTTAATGATTGGTTATTTA+TGG | - | chr4.1:15476907-15476926 | None:intergenic | 20.0% |
| !!! | TGAATTTGAAATATTTGACA+AGG | + | chr4.1:15476616-15476635 | MS.gene08260:intron | 20.0% |
| ! | AAATTTAAGAATTTACCTGC+TGG | + | chr4.1:15477594-15477613 | MS.gene08260:CDS | 25.0% |
| ! | ATGAAGATTAAGATAGGTAA+TGG | - | chr4.1:15476448-15476467 | None:intergenic | 25.0% |
| ! | CAAAAGGAATATACATTTGT+GGG | + | chr4.1:15479732-15479751 | MS.gene08260:intron | 25.0% |
| ! | CAATAAAACCAAGCATATAA+AGG | - | chr4.1:15478168-15478187 | None:intergenic | 25.0% |
| ! | GACATTTGGATTCTAATAAA+AGG | + | chr4.1:15479464-15479483 | MS.gene08260:intron | 25.0% |
| ! | TAAGATAGTTGGTTACTATT+GGG | + | chr4.1:15476733-15476752 | MS.gene08260:intron | 25.0% |
| ! | TATTATGTTACTCATTCAGT+TGG | + | chr4.1:15477467-15477486 | MS.gene08260:intron | 25.0% |
| ! | TCTGCATCATTTACAAAATA+AGG | + | chr4.1:15478707-15478726 | MS.gene08260:intron | 25.0% |
| ! | TGTATATATAGAAAACCCAT+AGG | - | chr4.1:15478572-15478591 | None:intergenic | 25.0% |
| ! | TTAAGATAGTTGGTTACTAT+TGG | + | chr4.1:15476732-15476751 | MS.gene08260:intron | 25.0% |
| ! | TTACTTGTAACAGATACAAA+CGG | - | chr4.1:15479285-15479304 | None:intergenic | 25.0% |
| ! | TTATTTATGGTATGTTTGGA+TGG | - | chr4.1:15476894-15476913 | None:intergenic | 25.0% |
| ! | TTCATTGAGTTAAATTCGTT+TGG | - | chr4.1:15478682-15478701 | None:intergenic | 25.0% |
| ! | TTCTCAACATTGAAAAGATT+AGG | + | chr4.1:15478531-15478550 | MS.gene08260:intron | 25.0% |
| ! | TTGGTTATTTATGGTATGTT+TGG | - | chr4.1:15476898-15476917 | None:intergenic | 25.0% |
| ! | TTTCATTAGAATCCAAATGT+CGG | - | chr4.1:15479644-15479663 | None:intergenic | 25.0% |
| !! | ACGTTTTATCAAAGAAAACT+TGG | - | chr4.1:15478928-15478947 | None:intergenic | 25.0% |
| !! | TTAAGTTGTAACACATCTTA+AGG | + | chr4.1:15479953-15479972 | MS.gene08260:intron | 25.0% |
| !!! | ACTTTTTTCAGAGAAACAAA+TGG | - | chr4.1:15480456-15480475 | None:intergenic | 25.0% |
| !!! | TGACCTATGAATATTTTTGT+AGG | + | chr4.1:15478340-15478359 | MS.gene08260:intron | 25.0% |
| AAGATAGTTGGTTACTATTG+GGG | + | chr4.1:15476734-15476753 | MS.gene08260:intron | 30.0% | |
| AATAGAATATTGTTTCCCCA+GGG | + | chr4.1:15477775-15477794 | MS.gene08260:intron | 30.0% | |
| AATTGATATGTTGTTAGTCC+AGG | - | chr4.1:15477448-15477467 | None:intergenic | 30.0% | |
| ACCAAATTAGCAGTTAAAGA+TGG | - | chr4.1:15477715-15477734 | None:intergenic | 30.0% | |
| ACCATCTTTAACTGCTAATT+TGG | + | chr4.1:15477711-15477730 | MS.gene08260:intron | 30.0% | |
| AGGATATATTTGACTCTGTT+AGG | + | chr4.1:15477081-15477100 | MS.gene08260:intron | 30.0% | |
| AGTACTTGAAACCATCAAAA+AGG | + | chr4.1:15476547-15476566 | MS.gene08260:CDS | 30.0% | |
| ATCAAAGAAAACTTGGAAAG+TGG | - | chr4.1:15478921-15478940 | None:intergenic | 30.0% | |
| ATGTTCGTTCAAATAAGACT+TGG | - | chr4.1:15477117-15477136 | None:intergenic | 30.0% | |
| ATTTGGGAAATTCTAAGTGT+TGG | + | chr4.1:15480109-15480128 | MS.gene08260:intron | 30.0% | |
| CATTAGGTACATGTAAAGTT+TGG | + | chr4.1:15476680-15476699 | MS.gene08260:intron | 30.0% | |
| CCAAAAGGAATATACATTTG+TGG | + | chr4.1:15479731-15479750 | MS.gene08260:intron | 30.0% | |
| CGTAAACAAAAATCGACATT+TGG | + | chr4.1:15479450-15479469 | MS.gene08260:intron | 30.0% | |
| GACTTGTGATTATGTCTAAA+TGG | + | chr4.1:15479185-15479204 | MS.gene08260:intron | 30.0% | |
| GCAATAAACAAGTAGGAATT+TGG | - | chr4.1:15480503-15480522 | None:intergenic | 30.0% | |
| GCACATAATCACTATTCATT+AGG | + | chr4.1:15476664-15476683 | MS.gene08260:intron | 30.0% | |
| GGACCTACAAAAATATTCAT+AGG | - | chr4.1:15478346-15478365 | None:intergenic | 30.0% | |
| GGATATATTTGACTCTGTTA+GGG | + | chr4.1:15477082-15477101 | MS.gene08260:intron | 30.0% | |
| GGATATCATTAAACACCAAA+AGG | + | chr4.1:15479844-15479863 | MS.gene08260:intron | 30.0% | |
| GTATACAATATTCCAGAACA+TGG | + | chr4.1:15478824-15478843 | MS.gene08260:intron | 30.0% | |
| GTGGACATGCTAAAATATAT+TGG | + | chr4.1:15477528-15477547 | MS.gene08260:CDS | 30.0% | |
| TAATAGAATATTGTTTCCCC+AGG | + | chr4.1:15477774-15477793 | MS.gene08260:intron | 30.0% | |
| TAGTAAATCCCAAACATCAT+CGG | - | chr4.1:15478642-15478661 | None:intergenic | 30.0% | |
| TAGTGATTCAGATATGTCAT+CGG | + | chr4.1:15477868-15477887 | MS.gene08260:CDS | 30.0% | |
| TGGAATATTGTATACATGCT+GGG | - | chr4.1:15478819-15478838 | None:intergenic | 30.0% | |
| TTAATTTCATGTTCTGCCTT+AGG | - | chr4.1:15479152-15479171 | None:intergenic | 30.0% | |
| TTCACTGTATCTCATACATT+TGG | + | chr4.1:15479787-15479806 | MS.gene08260:intron | 30.0% | |
| TTCTTTATCTTCTGTATCTG+TGG | - | chr4.1:15480008-15480027 | None:intergenic | 30.0% | |
| ! | ACATCATTTTACTAATTCCG+TGG | + | chr4.1:15479357-15479376 | MS.gene08260:intron | 30.0% |
| ! | ACGAACATGTTTACTTGTTA+TGG | + | chr4.1:15477129-15477148 | MS.gene08260:intron | 30.0% |
| ! | ATATTTTCATCCCAGATGAA+TGG | + | chr4.1:15476189-15476208 | MS.gene08260:CDS | 30.0% |
| ! | ATGCTTAGTGTTGAAATTTG+GGG | - | chr4.1:15480339-15480358 | None:intergenic | 30.0% |
| ! | CATAGTCTATACCTTTTTGA+TGG | - | chr4.1:15476561-15476580 | None:intergenic | 30.0% |
| ! | CCACAAATGTATATTCCTTT+TGG | - | chr4.1:15479734-15479753 | None:intergenic | 30.0% |
| ! | GATCTTCTAGTTATGCATTT+GGG | + | chr4.1:15480093-15480112 | MS.gene08260:intron | 30.0% |
| ! | GATGCTTAGTGTTGAAATTT+GGG | - | chr4.1:15480340-15480359 | None:intergenic | 30.0% |
| ! | GTGTTATTCAATTGCTAGTT+AGG | + | chr4.1:15476709-15476728 | MS.gene08260:intron | 30.0% |
| ! | GTTTTCTATATACAGTGAAG+TGG | + | chr4.1:15477036-15477055 | MS.gene08260:intron | 30.0% |
| ! | TCTGTCATTTATTCCATAAC+AGG | + | chr4.1:15477169-15477188 | MS.gene08260:intron | 30.0% |
| ! | TGATCTTCTAGTTATGCATT+TGG | + | chr4.1:15480092-15480111 | MS.gene08260:intron | 30.0% |
| ! | TGATGCTTAGTGTTGAAATT+TGG | - | chr4.1:15480341-15480360 | None:intergenic | 30.0% |
| ! | TGTTGGTTATGAAGTATTAG+TGG | + | chr4.1:15477509-15477528 | MS.gene08260:CDS | 30.0% |
| !!! | AATGTCGATTTTTGTTTACG+AGG | - | chr4.1:15479450-15479469 | None:intergenic | 30.0% |
| !!! | AGCATTTTTTCGCTTATCAA+AGG | - | chr4.1:15477292-15477311 | None:intergenic | 30.0% |
| AAATACCTTCATCAGCTTGA+GGG | - | chr4.1:15478790-15478809 | None:intergenic | 35.0% | |
| ACTGTATCTCATACGTTTGT+TGG | + | chr4.1:15479763-15479782 | MS.gene08260:intron | 35.0% | |
| AGATAGTTGGTTACTATTGG+GGG | + | chr4.1:15476735-15476754 | MS.gene08260:intron | 35.0% | |
| AGGAATATACATTTGTGGGT+TGG | + | chr4.1:15479736-15479755 | MS.gene08260:intron | 35.0% | |
| AGTCGAACTGTCAAAACATT+AGG | + | chr4.1:15476774-15476793 | MS.gene08260:intron | 35.0% | |
| ATAAAAGGATTCCTTACGCA+TGG | + | chr4.1:15479479-15479498 | MS.gene08260:intron | 35.0% | |
| ATAGGAGATTAAGGAGATAG+CGG | - | chr4.1:15476304-15476323 | None:intergenic | 35.0% | |
| ATCCAAAACAGAACACCTAT+GGG | + | chr4.1:15478554-15478573 | MS.gene08260:intron | 35.0% | |
| ATCTTGATTTCTTGTGACAC+AGG | + | chr4.1:15480375-15480394 | MS.gene08260:intron | 35.0% | |
| ATGTGATCTTCCAATCTTCA+CGG | + | chr4.1:15479048-15479067 | MS.gene08260:intron | 35.0% | |
| ATTAGAATCCAAATGTCGGA+GGG | - | chr4.1:15479640-15479659 | None:intergenic | 35.0% | |
| ATTGGAAGATCACATAGGAT+GGG | - | chr4.1:15479043-15479062 | None:intergenic | 35.0% | |
| ATTTACCTGCTGGAAAATTC+TGG | + | chr4.1:15477604-15477623 | MS.gene08260:CDS | 35.0% | |
| CAAAGAAAAGAGACCTGTTA+TGG | - | chr4.1:15477185-15477204 | None:intergenic | 35.0% | |
| CACGAAAACCACAAAATAGA+GGG | - | chr4.1:15479409-15479428 | None:intergenic | 35.0% | |
| CATATCTTGCTCTCAAATAG+AGG | + | chr4.1:15478503-15478522 | MS.gene08260:intron | 35.0% | |
| CCTATCTTAACAACATGTGT+GGG | - | chr4.1:15477555-15477574 | None:intergenic | 35.0% | |
| CCTCTTATAGTGAATACTTC+TGG | + | chr4.1:15477327-15477346 | MS.gene08260:CDS | 35.0% | |
| CGAATCTTTATGCTTGCAAT+GGG | - | chr4.1:15477941-15477960 | None:intergenic | 35.0% | |
| CGAGATAGATTCAGTTCTTA+AGG | + | chr4.1:15477662-15477681 | MS.gene08260:CDS | 35.0% | |
| CGTAGAATATTTCAGAGCTT+GGG | - | chr4.1:15478367-15478386 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr4.1:15480315-15480334 | None:intergenic | 35.0% | |
| CTGGAATATTGTATACATGC+TGG | - | chr4.1:15478820-15478839 | None:intergenic | 35.0% | |
| CTGGATATCATTCAAACTCT+CGG | + | chr4.1:15479684-15479703 | MS.gene08260:intron | 35.0% | |
| CTTACAGCATCTTCAAAAAC+AGG | - | chr4.1:15476982-15477001 | None:intergenic | 35.0% | |
| CTTGAGAAGAGTTCATAAAG+AGG | + | chr4.1:15480268-15480287 | MS.gene08260:intron | 35.0% | |
| GACTAAATCCGATGATGTTT+GGG | + | chr4.1:15478631-15478650 | MS.gene08260:intron | 35.0% | |
| GATGACATATCTGAATCACT+AGG | - | chr4.1:15477869-15477888 | None:intergenic | 35.0% | |
| GCTAGTTAGGTTAAGATAGT+TGG | + | chr4.1:15476722-15476741 | MS.gene08260:intron | 35.0% | |
| GGATGAAAATATCTGGTGAA+GGG | - | chr4.1:15476181-15476200 | None:intergenic | 35.0% | |
| GGTATTTATTGTCTGTTTGC+AGG | + | chr4.1:15477061-15477080 | MS.gene08260:intron | 35.0% | |
| GTCGAACTGTCAAAACATTA+GGG | + | chr4.1:15476775-15476794 | MS.gene08260:intron | 35.0% | |
| GTTAGAGAGATTAAACCAAG+AGG | - | chr4.1:15476389-15476408 | None:intergenic | 35.0% | |
| GTTCAAATAAGACTTGGATC+AGG | - | chr4.1:15477111-15477130 | None:intergenic | 35.0% | |
| TAAAGATCATCCGTGAAGAT+TGG | - | chr4.1:15479061-15479080 | None:intergenic | 35.0% | |
| TAAATACCTTCATCAGCTTG+AGG | - | chr4.1:15478791-15478810 | None:intergenic | 35.0% | |
| TAGATTCAGTTCTTAAGGAC+CGG | + | chr4.1:15477667-15477686 | MS.gene08260:CDS | 35.0% | |
| TATTGTATACATGCTGGGAA+TGG | - | chr4.1:15478814-15478833 | None:intergenic | 35.0% | |
| TCGAATCTTTATGCTTGCAA+TGG | - | chr4.1:15477942-15477961 | None:intergenic | 35.0% | |
| TCTATATACAGTGAAGTGGA+TGG | + | chr4.1:15477040-15477059 | MS.gene08260:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr4.1:15479544-15479563 | None:intergenic | 35.0% | |
| TGAAGATTGGAAGATCACAT+AGG | - | chr4.1:15479048-15479067 | None:intergenic | 35.0% | |
| TGACTAAATCCGATGATGTT+TGG | + | chr4.1:15478630-15478649 | MS.gene08260:intron | 35.0% | |
| TGCATAACTAGAAGATCAGA+TGG | - | chr4.1:15480090-15480109 | None:intergenic | 35.0% | |
| TGGGATTTACTAACTGACTA+AGG | + | chr4.1:15478650-15478669 | MS.gene08260:intron | 35.0% | |
| TGGTTGCTAATAGGAGATTA+AGG | - | chr4.1:15476313-15476332 | None:intergenic | 35.0% | |
| TTATAGTGAATACTTCTGGC+TGG | + | chr4.1:15477331-15477350 | MS.gene08260:CDS | 35.0% | |
| TTATCACGACAAAGTCTCAT+TGG | + | chr4.1:15479017-15479036 | MS.gene08260:intron | 35.0% | |
| TTGCTGATGTACTTACCAAA+GGG | - | chr4.1:15478860-15478879 | None:intergenic | 35.0% | |
| ! | AACACTGATGGATCTATCTT+AGG | - | chr4.1:15477219-15477238 | None:intergenic | 35.0% |
| ! | ACATACTCTAAGAACACTGA+TGG | - | chr4.1:15477231-15477250 | None:intergenic | 35.0% |
| ! | AGTTGATGCTTGTAACTTGA+TGG | + | chr4.1:15478039-15478058 | MS.gene08260:intron | 35.0% |
| ! | ATAAGCTACTTTCTTGCATC+TGG | - | chr4.1:15476333-15476352 | None:intergenic | 35.0% |
| ! | CAAGATATGACGACACATTT+TGG | - | chr4.1:15478492-15478511 | None:intergenic | 35.0% |
| ! | CATAACAGGTCTCTTTTCTT+TGG | + | chr4.1:15477183-15477202 | MS.gene08260:intron | 35.0% |
| ! | CTCTACTTGTTAAGTTGTGA+TGG | + | chr4.1:15476642-15476661 | MS.gene08260:intron | 35.0% |
| ! | CTGGAAAATTCTGGTTAGAT+GGG | + | chr4.1:15477613-15477632 | MS.gene08260:CDS | 35.0% |
| ! | TATAGTGAATACTTCTGGCT+GGG | + | chr4.1:15477332-15477351 | MS.gene08260:CDS | 35.0% |
| ! | TCATCTGGGATGAAAATATC+TGG | - | chr4.1:15476188-15476207 | None:intergenic | 35.0% |
| ! | TGGAAAATTCTGGTTAGATG+GGG | + | chr4.1:15477614-15477633 | MS.gene08260:CDS | 35.0% |
| !! | ATACGTTTGTTGGCTTTAAC+GGG | + | chr4.1:15479901-15479920 | MS.gene08260:intron | 35.0% |
| !! | CATACGTTTGTTGGCTTTAA+CGG | + | chr4.1:15479900-15479919 | MS.gene08260:intron | 35.0% |
| !! | CCAAGCTCTGAAATATTCTA+CGG | + | chr4.1:15478365-15478384 | MS.gene08260:CDS | 35.0% |
| !! | CCAGAAGTATTCACTATAAG+AGG | - | chr4.1:15477330-15477349 | None:intergenic | 35.0% |
| !! | GATTTTTGTTTACGAGGCAT+TGG | - | chr4.1:15479444-15479463 | None:intergenic | 35.0% |
| !!! | TGACGACACATTTTGGAATT+TGG | - | chr4.1:15478485-15478504 | None:intergenic | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr4.1:15479543-15479562 | MS.gene08260:intron | 35.0% |
| !!! | TTGGTTTTGTCTTGCATTTC+AGG | + | chr4.1:15477486-15477505 | MS.gene08260:intron | 35.0% |
| AAAAGTCAACCTCTTGCTAC+AGG | + | chr4.1:15480470-15480489 | MS.gene08260:CDS | 40.0% | |
| AAAGTCAACCTCTTGCTACA+GGG | + | chr4.1:15480471-15480490 | MS.gene08260:CDS | 40.0% | |
| AATACCTTCATCAGCTTGAG+GGG | - | chr4.1:15478789-15478808 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr4.1:15479550-15479569 | None:intergenic | 40.0% | |
| ACTCCCTATGTAAACACACA+GGG | - | chr4.1:15478888-15478907 | None:intergenic | 40.0% | |
| AGAAAACTTGGAAAGTGGAC+TGG | - | chr4.1:15478916-15478935 | None:intergenic | 40.0% | |
| AGCCAACAATACTAGCATTC+AGG | - | chr4.1:15478391-15478410 | None:intergenic | 40.0% | |
| ATAAGGACAGTGAGATGTCA+AGG | - | chr4.1:15477912-15477931 | None:intergenic | 40.0% | |
| CAAACTGAGTTTACTCCTCT+TGG | + | chr4.1:15476371-15476390 | MS.gene08260:CDS | 40.0% | |
| CAAGAGGAGTAAACTCAGTT+TGG | - | chr4.1:15476373-15476392 | None:intergenic | 40.0% | |
| CACATAAACTACTGCTTTCC+TGG | + | chr4.1:15477427-15477446 | MS.gene08260:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr4.1:15479549-15479568 | None:intergenic | 40.0% | |
| CATTAGAATCCAAATGTCGG+AGG | - | chr4.1:15479641-15479660 | None:intergenic | 40.0% | |
| CCCACACATGTTGTTAAGAT+AGG | + | chr4.1:15477552-15477571 | MS.gene08260:CDS | 40.0% | |
| CCGTAGAATATTTCAGAGCT+TGG | - | chr4.1:15478368-15478387 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr4.1:15479518-15479537 | None:intergenic | 40.0% | |
| CTTGCAATGGGAACTTGATA+AGG | - | chr4.1:15477929-15477948 | None:intergenic | 40.0% | |
| CTTGCTGATGTACTTACCAA+AGG | - | chr4.1:15478861-15478880 | None:intergenic | 40.0% | |
| GAAGATGCTGTAAGACTCTA+AGG | + | chr4.1:15476988-15477007 | MS.gene08260:intron | 40.0% | |
| GAGAAGAGTTCATAAAGAGG+AGG | + | chr4.1:15480271-15480290 | MS.gene08260:intron | 40.0% | |
| GAGTGTTATCTATCCGATGT+GGG | - | chr4.1:15480249-15480268 | None:intergenic | 40.0% | |
| GATAGTTGGTTACTATTGGG+GGG | + | chr4.1:15476736-15476755 | MS.gene08260:intron | 40.0% | |
| GATCCAAAACAGAACACCTA+TGG | + | chr4.1:15478553-15478572 | MS.gene08260:intron | 40.0% | |
| GATTGGAAGATCACATAGGA+TGG | - | chr4.1:15479044-15479063 | None:intergenic | 40.0% | |
| GCACGAAAACCACAAAATAG+AGG | - | chr4.1:15479410-15479429 | None:intergenic | 40.0% | |
| GCCTATCTTAACAACATGTG+TGG | - | chr4.1:15477556-15477575 | None:intergenic | 40.0% | |
| GGCACACAAAAAACACCAAA+AGG | + | chr4.1:15479716-15479735 | MS.gene08260:intron | 40.0% | |
| GGGATGAAAATATCTGGTGA+AGG | - | chr4.1:15476182-15476201 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | - | chr4.1:15479594-15479613 | None:intergenic | 40.0% | |
| GTTGTTTACGAAGTTACTCC+AGG | + | chr4.1:15476410-15476429 | MS.gene08260:CDS | 40.0% | |
| TAATGGCTAGAAAACCTACC+TGG | - | chr4.1:15476431-15476450 | None:intergenic | 40.0% | |
| TACTCCCTATGTAAACACAC+AGG | - | chr4.1:15478889-15478908 | None:intergenic | 40.0% | |
| TAGGAGATTAAGGAGATAGC+GGG | - | chr4.1:15476303-15476322 | None:intergenic | 40.0% | |
| TCAAACTCTCGGTATCATTG+AGG | + | chr4.1:15479695-15479714 | MS.gene08260:intron | 40.0% | |
| TCTTGCATCTGGTTGCTAAT+AGG | - | chr4.1:15476322-15476341 | None:intergenic | 40.0% | |
| TGACCCTGTGTGTTTACATA+GGG | + | chr4.1:15478882-15478901 | MS.gene08260:intron | 40.0% | |
| TGAGCTACCCTTTATATGCT+TGG | + | chr4.1:15478157-15478176 | MS.gene08260:intron | 40.0% | |
| TGGAAATTCCGCCTTAATTG+CGG | + | chr4.1:15480129-15480148 | MS.gene08260:intron | 40.0% | |
| TTAGAATCCAAATGTCGGAG+GGG | - | chr4.1:15479639-15479658 | None:intergenic | 40.0% | |
| TTAGCCAAAGTAGTCCACAT+AGG | + | chr4.1:15479078-15479097 | MS.gene08260:intron | 40.0% | |
| TTCAGAGAAACAAATGGCAC+AGG | - | chr4.1:15480450-15480469 | None:intergenic | 40.0% | |
| TTCAGATATGTCATCGGACA+AGG | + | chr4.1:15477874-15477893 | MS.gene08260:CDS | 40.0% | |
| TTCGAGTGATAAGGCTGTTT+AGG | - | chr4.1:15478080-15478099 | None:intergenic | 40.0% | |
| TTGACCCTGTGTGTTTACAT+AGG | + | chr4.1:15478881-15478900 | MS.gene08260:intron | 40.0% | |
| TTGCAATGAAGGCTAACCAA+AGG | - | chr4.1:15480181-15480200 | None:intergenic | 40.0% | |
| TTGTGACACAGGAATTGTGA+GGG | + | chr4.1:15480386-15480405 | MS.gene08260:intron | 40.0% | |
| TTTACGAAGTTACTCCAGGT+AGG | + | chr4.1:15476414-15476433 | MS.gene08260:intron | 40.0% | |
| ! | AACCCATAGGTGTTCTGTTT+TGG | - | chr4.1:15478559-15478578 | None:intergenic | 40.0% |
| ! | AATACTTCTGGCTGGGTTAA+AGG | + | chr4.1:15477339-15477358 | MS.gene08260:CDS | 40.0% |
| ! | AATGCCTATGTGGACTACTT+TGG | - | chr4.1:15479085-15479104 | None:intergenic | 40.0% |
| ! | AGAGTGTTATCTATCCGATG+TGG | - | chr4.1:15480250-15480269 | None:intergenic | 40.0% |
| ! | AGATGGTAACGCGTAAGATT+TGG | - | chr4.1:15477698-15477717 | None:intergenic | 40.0% |
| ! | CACACAACTTTCGAGTGATA+AGG | - | chr4.1:15478089-15478108 | None:intergenic | 40.0% |
| ! | GATGGTAACGCGTAAGATTT+GGG | - | chr4.1:15477697-15477716 | None:intergenic | 40.0% |
| ! | GCTGGAAAATTCTGGTTAGA+TGG | + | chr4.1:15477612-15477631 | MS.gene08260:CDS | 40.0% |
| ! | GTTGAAGACCCTCTATTTTG+TGG | + | chr4.1:15479398-15479417 | MS.gene08260:intron | 40.0% |
| ! | TCCTTTTGAACAAACTCCCT+GGG | - | chr4.1:15477794-15477813 | None:intergenic | 40.0% |
| ! | TCTAACCAGAATTTTCCAGC+AGG | - | chr4.1:15477612-15477631 | None:intergenic | 40.0% |
| ! | TTGTCTTGCATTTCAGGTGT+TGG | + | chr4.1:15477492-15477511 | MS.gene08260:intron | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr4.1:15480313-15480332 | MS.gene08260:intron | 40.0% |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | + | chr4.1:15480211-15480230 | MS.gene08260:intron | 40.0% |
| !! | GTGTGATCGGCTTTAAAGAT+TGG | - | chr4.1:15480056-15480075 | None:intergenic | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | + | chr4.1:15480212-15480231 | MS.gene08260:intron | 40.0% |
| AAACTCAGTTTGGCCAACGT+CGG | - | chr4.1:15476363-15476382 | None:intergenic | 45.0% | |
| AAGTACCTGGAGATTTACCC+TGG | + | chr4.1:15478426-15478445 | MS.gene08260:CDS | 45.0% | |
| ATACCTTCATCAGCTTGAGG+GGG | - | chr4.1:15478788-15478807 | None:intergenic | 45.0% | |
| CAAGTTACCTACCAAGACCA+AGG | - | chr4.1:15478454-15478473 | None:intergenic | 45.0% | |
| CAGCTTGTGACCATTCATCT+GGG | - | chr4.1:15476202-15476221 | None:intergenic | 45.0% | |
| CCTCAAAGCCAACACAATGA+AGG | - | chr4.1:15480213-15480232 | None:intergenic | 45.0% | |
| CTCCAACACCTTCATTGTGT+TGG | + | chr4.1:15480202-15480221 | MS.gene08260:intron | 45.0% | |
| CTTGTGACACAGGAATTGTG+AGG | + | chr4.1:15480385-15480404 | MS.gene08260:intron | 45.0% | |
| CTTTCCTAAGTTCTCCACAG+CGG | + | chr4.1:15478123-15478142 | MS.gene08260:intron | 45.0% | |
| GATTCGACATGTTCATCGTG+AGG | + | chr4.1:15477955-15477974 | MS.gene08260:CDS | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr4.1:15479519-15479538 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr4.1:15479522-15479541 | None:intergenic | 45.0% | |
| GCTTATCTTGATACCGACGT+TGG | + | chr4.1:15476347-15476366 | MS.gene08260:CDS | 45.0% | |
| GGACGTTTGATACCTTGCAA+AGG | - | chr4.1:15479987-15480006 | None:intergenic | 45.0% | |
| GGCCTGAATGCTAGTATTGT+TGG | + | chr4.1:15478386-15478405 | MS.gene08260:CDS | 45.0% | |
| GGCTGTATGATCTGTGTGAT+CGG | - | chr4.1:15480069-15480088 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr4.1:15479588-15479607 | None:intergenic | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr4.1:15479587-15479606 | None:intergenic | 45.0% | |
| TGGTTAGATGGGGAAGATGA+TGG | + | chr4.1:15477624-15477643 | MS.gene08260:CDS | 45.0% | |
| TGTGACACAGGAATTGTGAG+GGG | + | chr4.1:15480387-15480406 | MS.gene08260:intron | 45.0% | |
| TTCCAGAACATGGTACTGCT+TGG | + | chr4.1:15478834-15478853 | MS.gene08260:intron | 45.0% | |
| TTTGTTCTGTGACGCTGCAT+TGG | + | chr4.1:15478966-15478985 | MS.gene08260:intron | 45.0% | |
| ! | AAGGCATCACTACCTTTGCA+AGG | + | chr4.1:15479972-15479991 | MS.gene08260:intron | 45.0% |
| ! | AGCCAACACAATGAAGGTGT+TGG | - | chr4.1:15480207-15480226 | None:intergenic | 45.0% |
| ! | CACATAGGCATTTTGTGCTG+CGG | + | chr4.1:15479093-15479112 | MS.gene08260:intron | 45.0% |
| ! | CAGGGAGTTTGTTCAAAAGG+AGG | + | chr4.1:15477793-15477812 | MS.gene08260:intron | 45.0% |
| ! | CCTTTTGAACAAACTCCCTG+GGG | - | chr4.1:15477793-15477812 | None:intergenic | 45.0% |
| ! | CTCCTTTTGAACAAACTCCC+TGG | - | chr4.1:15477795-15477814 | None:intergenic | 45.0% |
| ! | GCAGTTGAATCTGAAGTACC+TGG | + | chr4.1:15478413-15478432 | MS.gene08260:CDS | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr4.1:15479554-15479573 | MS.gene08260:intron | 45.0% |
| ! | TTGTGGTTTTCGTGCCTAGA+AGG | + | chr4.1:15479415-15479434 | MS.gene08260:intron | 45.0% |
| !! | AATTGTGAGGGGCATTGACA+CGG | + | chr4.1:15480398-15480417 | MS.gene08260:CDS | 45.0% |
| !! | ACTATTGGGGGGTGTGTTTT+TGG | + | chr4.1:15476747-15476766 | MS.gene08260:intron | 45.0% |
| !! | AGGCGTTGAACTGGATACAA+TGG | - | chr4.1:15476231-15476250 | None:intergenic | 45.0% |
| !! | CAAAACCGGCTTGTAAGGTT+AGG | - | chr4.1:15480301-15480320 | None:intergenic | 45.0% |
| !! | CAACACAATGAAGGTGTTGG+AGG | - | chr4.1:15480204-15480223 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr4.1:15480306-15480325 | None:intergenic | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr4.1:15480303-15480322 | MS.gene08260:intron | 45.0% |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | + | chr4.1:15480210-15480229 | MS.gene08260:intron | 45.0% |
| !! | GTTGATTTGCCAACACTTCC+AGG | - | chr4.1:15476275-15476294 | None:intergenic | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | + | chr4.1:15480213-15480232 | MS.gene08260:intron | 45.0% |
| !!! | AATTTTTATCTTTTTATTTT+TGG | - | chr4.1:15479326-15479345 | None:intergenic | 5.0% |
| AAATGTCGGAGGGGTAACCT+TGG | - | chr4.1:15479630-15479649 | None:intergenic | 50.0% | |
| AAGGTTACCCCTCCGACATT+TGG | + | chr4.1:15479629-15479648 | MS.gene08260:intron | 50.0% | |
| AGGATTCCTTACGCATGGTC+TGG | + | chr4.1:15479484-15479503 | MS.gene08260:intron | 50.0% | |
| AGGTCCACAAACGAGTACGA+CGG | - | chr4.1:15476255-15476274 | None:intergenic | 50.0% | |
| AGTTCGCAACACTACTGCCA+CGG | - | chr4.1:15479377-15479396 | None:intergenic | 50.0% | |
| ATGGAAGACTTCAGAGCGAG+GGG | - | chr4.1:15476875-15476894 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr4.1:15479610-15479629 | MS.gene08260:intron | 50.0% | |
| CGACATGTTCATCGTGAGGT+TGG | + | chr4.1:15477959-15477978 | MS.gene08260:intron | 50.0% | |
| CGCAGCACAAAATGCCTATG+TGG | - | chr4.1:15479095-15479114 | None:intergenic | 50.0% | |
| CGCGTAAGATTTGGGCTTAC+CGG | - | chr4.1:15477689-15477708 | None:intergenic | 50.0% | |
| CGCTGTGGAGAACTTAGGAA+AGG | - | chr4.1:15478125-15478144 | None:intergenic | 50.0% | |
| GATGGAAGACTTCAGAGCGA+GGG | - | chr4.1:15476876-15476895 | None:intergenic | 50.0% | |
| GCACTCCTAACCTTACAAGC+CGG | + | chr4.1:15480293-15480312 | MS.gene08260:intron | 50.0% | |
| GCAGCTTGTGACCATTCATC+TGG | - | chr4.1:15476203-15476222 | None:intergenic | 50.0% | |
| GGATATCACCCTGTAGCAAG+AGG | - | chr4.1:15480482-15480501 | None:intergenic | 50.0% | |
| GGATTCCTTACGCATGGTCT+GGG | + | chr4.1:15479485-15479504 | MS.gene08260:intron | 50.0% | |
| GGTAGGTGCCCATGAATAGT+CGG | + | chr4.1:15479114-15479133 | MS.gene08260:intron | 50.0% | |
| ! | CCCCAGGGAGTTTGTTCAAA+AGG | + | chr4.1:15477790-15477809 | MS.gene08260:intron | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | + | chr4.1:15480233-15480252 | MS.gene08260:intron | 50.0% |
| ! | GGTGTTGGAGGTTGCAATGA+AGG | - | chr4.1:15480192-15480211 | None:intergenic | 50.0% |
| ! | GTTTGTGGACCTGGAAGTGT+TGG | + | chr4.1:15476263-15476282 | MS.gene08260:CDS | 50.0% |
| ! | TAGGCATTTTGTGCTGCGGT+AGG | + | chr4.1:15479097-15479116 | MS.gene08260:intron | 50.0% |
| !! | ATTAAGGAGATAGCGGGCGA+AGG | - | chr4.1:15476297-15476316 | None:intergenic | 50.0% |
| !! | CGCGTGTACCGACTATTCAT+GGG | - | chr4.1:15479125-15479144 | None:intergenic | 50.0% |
| !! | TCGCGTGTACCGACTATTCA+TGG | - | chr4.1:15479126-15479145 | None:intergenic | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr4.1:15479575-15479594 | None:intergenic | 55.0% | |
| AGGCACCAGGGTAAATCTCC+AGG | - | chr4.1:15478434-15478453 | None:intergenic | 55.0% | |
| CATGGTACTGCTTGGCCCTT+TGG | + | chr4.1:15478842-15478861 | MS.gene08260:intron | 55.0% | |
| CCTTACGCATGGTCTGGGAA+GGG | + | chr4.1:15479490-15479509 | MS.gene08260:intron | 55.0% | |
| CTAGGGGCAGACCGCAATTA+AGG | - | chr4.1:15480143-15480162 | None:intergenic | 55.0% | |
| CTTACGCATGGTCTGGGAAG+GGG | + | chr4.1:15479491-15479510 | MS.gene08260:intron | 55.0% | |
| GACTCCGCTGTGGAGAACTT+AGG | - | chr4.1:15478130-15478149 | None:intergenic | 55.0% | |
| GGAGATTTACCCTGGTGCCT+TGG | + | chr4.1:15478434-15478453 | MS.gene08260:CDS | 55.0% | |
| GGATGGAAGACTTCAGAGCG+AGG | - | chr4.1:15476877-15476896 | None:intergenic | 55.0% | |
| GGCCAAGCAGTACCATGTTC+TGG | - | chr4.1:15478839-15478858 | None:intergenic | 55.0% | |
| GGTCCACAAACGAGTACGAC+GGG | - | chr4.1:15476254-15476273 | None:intergenic | 55.0% | |
| GTCGTACTCGTTTGTGGACC+TGG | + | chr4.1:15476254-15476273 | MS.gene08260:CDS | 55.0% | |
| TCAGTCACAAGACTCCGCTG+TGG | - | chr4.1:15478140-15478159 | None:intergenic | 55.0% | |
| TCCTTACGCATGGTCTGGGA+AGG | + | chr4.1:15479489-15479508 | MS.gene08260:intron | 55.0% | |
| TTACCCTGGTGCCTTGGTCT+TGG | + | chr4.1:15478440-15478459 | MS.gene08260:CDS | 55.0% | |
| ! | CTACCAAGACCAAGGCACCA+GGG | - | chr4.1:15478446-15478465 | None:intergenic | 55.0% |
| !! | AGGGGCATTGACACGGTCAA+AGG | + | chr4.1:15480405-15480424 | MS.gene08260:CDS | 55.0% |
| !! | CGAGGCATTGGAAGCCTTCT+AGG | - | chr4.1:15479432-15479451 | None:intergenic | 55.0% |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | + | chr4.1:15480216-15480235 | MS.gene08260:intron | 55.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr4.1:15479621-15479640 | None:intergenic | 60.0% | |
| CCACAAACGAGTACGACGGG+AGG | - | chr4.1:15476251-15476270 | None:intergenic | 60.0% | |
| CCCTTCCCAGACCATGCGTA+AGG | - | chr4.1:15479493-15479512 | None:intergenic | 60.0% | |
| CCTCCCGTCGTACTCGTTTG+TGG | + | chr4.1:15476248-15476267 | MS.gene08260:CDS | 60.0% | |
| GCTCCCCCTCAAGCTGATGA+AGG | + | chr4.1:15478782-15478801 | MS.gene08260:intron | 60.0% | |
| GGGGCAGACCGCAATTAAGG+CGG | - | chr4.1:15480140-15480159 | None:intergenic | 60.0% | |
| TCGGTACACGCGAGAGCCTA+AGG | + | chr4.1:15479133-15479152 | MS.gene08260:intron | 60.0% | |
| TGGGAAGGGGTCCCACCATT+TGG | + | chr4.1:15479504-15479523 | MS.gene08260:intron | 60.0% | |
| ! | CCTACCAAGACCAAGGCACC+AGG | - | chr4.1:15478447-15478466 | None:intergenic | 60.0% |
| !! | CCTGGTGCCTTGGTCTTGGT+AGG | + | chr4.1:15478444-15478463 | MS.gene08260:intron | 60.0% |
| !! | TACGACGGGAGGCGTTGAAC+TGG | - | chr4.1:15476240-15476259 | None:intergenic | 60.0% |
| AAGGAGGCTCGTCTCCTGCG+TGG | + | chr4.1:15477809-15477828 | MS.gene08260:CDS | 65.0% | |
| CCACTATCCGTTCGCCACGC+AGG | - | chr4.1:15477826-15477845 | None:intergenic | 65.0% | |
| CCTGCGTGGCGAACGGATAG+TGG | + | chr4.1:15477823-15477842 | MS.gene08260:CDS | 65.0% | |
| CTCGTCTCCTGCGTGGCGAA+CGG | + | chr4.1:15477816-15477835 | MS.gene08260:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 15476167 | 15480524 | 15476167 | ID=MS.gene08260 |
| chr4.1 | mRNA | 15476167 | 15480524 | 15476167 | ID=MS.gene08260.t1;Parent=MS.gene08260 |
| chr4.1 | exon | 15476167 | 15476431 | 15476167 | ID=MS.gene08260.t1.exon1;Parent=MS.gene08260.t1 |
| chr4.1 | CDS | 15476167 | 15476431 | 15476167 | ID=cds.MS.gene08260.t1;Parent=MS.gene08260.t1 |
| chr4.1 | exon | 15476535 | 15476568 | 15476535 | ID=MS.gene08260.t1.exon2;Parent=MS.gene08260.t1 |
| chr4.1 | CDS | 15476535 | 15476568 | 15476535 | ID=cds.MS.gene08260.t1;Parent=MS.gene08260.t1 |
| chr4.1 | exon | 15477191 | 15477360 | 15477191 | ID=MS.gene08260.t1.exon3;Parent=MS.gene08260.t1 |
| chr4.1 | CDS | 15477191 | 15477360 | 15477191 | ID=cds.MS.gene08260.t1;Parent=MS.gene08260.t1 |
| chr4.1 | exon | 15477508 | 15477688 | 15477508 | ID=MS.gene08260.t1.exon4;Parent=MS.gene08260.t1 |
| chr4.1 | CDS | 15477508 | 15477688 | 15477508 | ID=cds.MS.gene08260.t1;Parent=MS.gene08260.t1 |
| chr4.1 | exon | 15477796 | 15477976 | 15477796 | ID=MS.gene08260.t1.exon5;Parent=MS.gene08260.t1 |
| chr4.1 | CDS | 15477796 | 15477976 | 15477796 | ID=cds.MS.gene08260.t1;Parent=MS.gene08260.t1 |
| chr4.1 | exon | 15478362 | 15478461 | 15478362 | ID=MS.gene08260.t1.exon6;Parent=MS.gene08260.t1 |
| chr4.1 | CDS | 15478362 | 15478461 | 15478362 | ID=cds.MS.gene08260.t1;Parent=MS.gene08260.t1 |
| chr4.1 | exon | 15480397 | 15480524 | 15480397 | ID=MS.gene08260.t1.exon7;Parent=MS.gene08260.t1 |
| chr4.1 | CDS | 15480397 | 15480524 | 15480397 | ID=cds.MS.gene08260.t1;Parent=MS.gene08260.t1 |
| Gene Sequence |
| Protein sequence |
