AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene48046

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48046.t1 MTR_5g091135 100.000 178 0 0 1 178 1 178 3.78e-133 370
MS.gene48046.t1 MTR_5g091120 100.000 178 0 0 1 178 1 178 3.78e-133 370
MS.gene48046.t1 MTR_2g098000 100.000 178 0 0 1 178 1 178 3.78e-133 370
MS.gene48046.t1 MTR_3g046320 94.382 178 10 0 1 178 1 178 3.26e-125 350
MS.gene48046.t1 MTR_3g046320 95.402 174 8 0 5 178 3 176 3.08e-124 347
MS.gene48046.t1 MTR_2g019720 62.353 85 32 0 92 176 1 85 1.04e-33 116
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene48046.t1 AT2G34480 90.230 174 17 0 5 178 5 178 2.89e-119 335
MS.gene48046.t1 AT2G34480 90.230 174 17 0 5 178 44 217 3.11e-119 336
MS.gene48046.t1 AT1G29965 87.079 178 23 0 1 178 1 178 1.19e-117 330
MS.gene48046.t1 AT3G14600 87.079 178 23 0 1 178 1 178 4.03e-117 329
MS.gene48046.t1 AT1G29970 89.017 173 19 0 6 178 140 312 1.03e-114 328

Find 47 sgRNAs with CRISPR-Local

Find 141 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATAAACAGGTTTGGCTTCT+TGG 0.139462 5.2:-77088614 None:intergenic
ATTAGAAACTTACCAGAATT+TGG 0.167108 5.2:-77086684 None:intergenic
CACCAGAGGGAACTTGATTT+TGG 0.187302 5.2:-77088542 None:intergenic
GAAAAGTAATGGACAAGTTT+TGG 0.246012 5.2:+77086831 MS.gene48046:CDS
GTTTGGCTTCTTGGCTTTGT+AGG 0.246112 5.2:-77088605 None:intergenic
AGATTTATCGCATGAAGCTT+TGG 0.341025 5.2:+77086636 MS.gene48046:CDS
AACTTACCAGAATTTGGATT+TGG 0.348831 5.2:-77086678 None:intergenic
ACGAGATGGCATCTCGTCAT+AGG 0.358917 5.2:+77088431 MS.gene48046:CDS
CCTACCAAGATTAAGAACTA+TGG 0.366976 5.2:+77088313 MS.gene48046:CDS
GATTTATCGCATGAAGCTTT+GGG 0.367321 5.2:+77086637 MS.gene48046:CDS
ATTCACTGAATCACATAAAC+AGG 0.373443 5.2:-77088627 None:intergenic
GATTCCATAGTTCTTAATCT+TGG 0.380047 5.2:-77088317 None:intergenic
TTCGTGCCAAATCCAAATTC+TGG 0.381119 5.2:+77086672 MS.gene48046:CDS
AAGCTTCATGCGATAAATCT+TGG 0.383045 5.2:-77086633 None:intergenic
TCCCAGCTAATCTGTGCAAA+AGG 0.391912 5.2:+77088494 MS.gene48046:CDS
CTGAATCACATAAACAGGTT+TGG 0.397820 5.2:-77088622 None:intergenic
TACCGTGATACTACTCTAAA+CGG 0.441043 5.2:+77088388 MS.gene48046:CDS
GGATTTGGCACGAACCTCAT+TGG 0.442665 5.2:-77086663 None:intergenic
AGTCTTAATGATTTGAATGC+AGG 0.447032 5.2:-77088464 None:intergenic
AGATTAAGAACTATGGAATC+TGG 0.456881 5.2:+77088320 MS.gene48046:CDS
CTCTGGTGTACAAGAAGATT+AGG 0.461451 5.2:+77088557 MS.gene48046:CDS
AGCTTCATGCGATAAATCTT+GGG 0.476384 5.2:-77086632 None:intergenic
CTCTTCCAACAACCTGGTAC+TGG 0.489846 5.2:-77086583 None:intergenic
TTTCTTGAGGAAGTTGAAGA+AGG 0.490067 5.2:+77086804 MS.gene48046:CDS
TGGCATCTCGTCATAGGGTC+AGG 0.497058 5.2:+77088437 MS.gene48046:CDS
TTTCACCAGTACCAGGTTGT+TGG 0.499494 5.2:+77086578 MS.gene48046:CDS
AAGAAGGTTAAGAAAAGTAA+TGG 0.518066 5.2:+77086820 MS.gene48046:CDS
TTTGCACAGATTAGCTGGGA+TGG 0.520373 5.2:-77088491 None:intergenic
CCCAGCTAATCTGTGCAAAA+GGG 0.524734 5.2:+77088495 MS.gene48046:CDS
TTGCGTTATCAGAGTCGTAC+TGG 0.532380 5.2:+77088343 MS.gene48046:CDS
AAGAGCACTTCCCACCGAAA+AGG 0.541834 5.2:+77086601 MS.gene48046:CDS
CGAGATGGCATCTCGTCATA+GGG 0.544710 5.2:+77088432 MS.gene48046:CDS
CCATAGTTCTTAATCTTGGT+AGG 0.548600 5.2:-77088313 None:intergenic
GAAACAGTTTCACCAGTACC+AGG 0.549157 5.2:+77086571 MS.gene48046:intron
TTCCAAAATCAAGTTCCCTC+TGG 0.549470 5.2:+77088540 MS.gene48046:CDS
GTCTTAATGATTTGAATGCA+GGG 0.566014 5.2:-77088463 None:intergenic
AGAAGATTAGGCCACCAACT+AGG 0.603627 5.2:+77088569 MS.gene48046:CDS
GCACAGATTAGCTGGGATGG+TGG 0.612537 5.2:-77088488 None:intergenic
TGGTTATCACAATATGTACA+AGG 0.613559 5.2:+77088363 MS.gene48046:CDS
GAAGTGCTCTTCCAACAACC+TGG 0.619307 5.2:-77086589 None:intergenic
GAAGCTTTGGGCAACCAATG+AGG 0.630309 5.2:+77086649 MS.gene48046:CDS
CTAATCTTCTTGTACACCAG+AGG 0.631597 5.2:-77088556 None:intergenic
TAATCTTCTTGTACACCAGA+GGG 0.642722 5.2:-77088555 None:intergenic
ATTGTTGTAGGTATTTCTTG+AGG 0.651477 5.2:+77086791 MS.gene48046:intron
GGAGACAATGTACAACGAGA+TGG 0.663821 5.2:+77088417 MS.gene48046:CDS
CGCCGTTTAGAGTAGTATCA+CGG 0.671590 5.2:-77088390 None:intergenic
TACTACTCTAAACGGCGCTG+TGG 0.679213 5.2:+77088396 MS.gene48046:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAATACAATAAAAAAA+AGG - chr5.2:77088135-77088154 None:intergenic 10.0%
!! ACAAAATACAATAAAAAAAA+GGG - chr5.2:77088134-77088153 None:intergenic 10.0%
!!! TTAATTGAAATTTTATAGAA+GGG + chr5.2:77086891-77086910 MS.gene48046:intron 10.0%
!! AAGCAACAAATAAAAAAAAA+TGG - chr5.2:77087792-77087811 None:intergenic 15.0%
!! CAAAATACAATAAAAAAAAG+GGG - chr5.2:77088133-77088152 None:intergenic 15.0%
!! GAATAGAAAAAATTAATGAT+AGG + chr5.2:77087202-77087221 MS.gene48046:intron 15.0%
!! TCTATAAAATTTCAATTAAC+AGG - chr5.2:77086890-77086909 None:intergenic 15.0%
!! TTAATAATGTTAATTGTTGT+AGG + chr5.2:77086779-77086798 MS.gene48046:intron 15.0%
!!! GTTAATTGAAATTTTATAGA+AGG + chr5.2:77086890-77086909 MS.gene48046:intron 15.0%
!! AGTCACAATATACAATTTAA+AGG - chr5.2:77088082-77088101 None:intergenic 20.0%
!! ATATTAGTATATTGTACAGT+TGG + chr5.2:77087273-77087292 MS.gene48046:intron 20.0%
!!! ATTTTAAGTAGATAGTACTT+TGG + chr5.2:77087854-77087873 MS.gene48046:intron 20.0%
!!! TTGTAGAGCTTTTTTTTTTT+AGG + chr5.2:77087011-77087030 MS.gene48046:intron 20.0%
!!! TTTTTTTTTTAGGTAAAGCA+AGG + chr5.2:77087021-77087040 MS.gene48046:intron 20.0%
! AAGAAGGTTAAGAAAAGTAA+TGG + chr5.2:77086820-77086839 MS.gene48046:CDS 25.0%
! ATTAGAAACTTACCAGAATT+TGG - chr5.2:77086687-77086706 None:intergenic 25.0%
! CAAAATAAAATCAGCTCAAA+AGG - chr5.2:77086519-77086538 None:intergenic 25.0%
! GTCAATAAAAACAAATAAGC+TGG - chr5.2:77086968-77086987 None:intergenic 25.0%
! GTTAAGCTAGATTTATACTT+AGG + chr5.2:77086919-77086938 MS.gene48046:intron 25.0%
! TGAGAAAATTAAGTTTGATG+CGG + chr5.2:77087762-77087781 MS.gene48046:intron 25.0%
! TTATGTTGAAATCCAAACAT+AGG + chr5.2:77088018-77088037 MS.gene48046:intron 25.0%
!! ATGTAATATCTGTCAGTTTT+TGG + chr5.2:77087514-77087533 MS.gene48046:intron 25.0%
!! CTATTTCTCTCATAAATAGA+GGG + chr5.2:77087424-77087443 MS.gene48046:intron 25.0%
!! TCTATTTCTCTCATAAATAG+AGG + chr5.2:77087423-77087442 MS.gene48046:intron 25.0%
!! TGCATGTAAAAGCTTTTATT+TGG + chr5.2:77087106-77087125 MS.gene48046:intron 25.0%
AAATGATGTATTGCCATAAC+TGG - chr5.2:77088047-77088066 None:intergenic 30.0%
AACAGGTACGATAAATGAAT+GGG - chr5.2:77086873-77086892 None:intergenic 30.0%
AACTTACCAGAATTTGGATT+TGG - chr5.2:77086681-77086700 None:intergenic 30.0%
AATAAAATCAGCTCAAAAGG+TGG - chr5.2:77086516-77086535 None:intergenic 30.0%
AATTGTTGTGAGAGAATTCT+TGG + chr5.2:77088181-77088200 MS.gene48046:intron 30.0%
ACAACCAGAATATCATTAGA+GGG - chr5.2:77087402-77087421 None:intergenic 30.0%
AGATTAAGAACTATGGAATC+TGG + chr5.2:77088320-77088339 MS.gene48046:CDS 30.0%
AGTCTTAATGATTTGAATGC+AGG - chr5.2:77088467-77088486 None:intergenic 30.0%
ATTGTTGTAGGTATTTCTTG+AGG + chr5.2:77086791-77086810 MS.gene48046:intron 30.0%
ATTTATACTTAGGCTGTGTT+TGG + chr5.2:77086929-77086948 MS.gene48046:intron 30.0%
GATTCCATAGTTCTTAATCT+TGG - chr5.2:77088320-77088339 None:intergenic 30.0%
GTCTTAATGATTTGAATGCA+GGG - chr5.2:77088466-77088485 None:intergenic 30.0%
TAAACAAGTGCTTATAAGGT+AGG - chr5.2:77087138-77087157 None:intergenic 30.0%
TAACAGGTACGATAAATGAA+TGG - chr5.2:77086874-77086893 None:intergenic 30.0%
TAAGTAGATAGTACTTTGGT+TGG + chr5.2:77087858-77087877 MS.gene48046:intron 30.0%
TAATAGCTAAAGCAAACACA+GGG - chr5.2:77088217-77088236 None:intergenic 30.0%
TCCAAAAAGATGGAAATTGA+AGG - chr5.2:77088245-77088264 None:intergenic 30.0%
TCTTCGAATAGACATCAAAA+AGG - chr5.2:77087652-77087671 None:intergenic 30.0%
TGGTTAAACAAGTGCTTATA+AGG - chr5.2:77087142-77087161 None:intergenic 30.0%
TGGTTATCACAATATGTACA+AGG + chr5.2:77088363-77088382 MS.gene48046:CDS 30.0%
TTGTGTCTATCTCTCATAAA+TGG - chr5.2:77087366-77087385 None:intergenic 30.0%
! ACCTTCAATTTCCATCTTTT+TGG + chr5.2:77088241-77088260 MS.gene48046:intron 30.0%
! ATTTCCATCTTTTTGGACAT+AGG + chr5.2:77088248-77088267 MS.gene48046:intron 30.0%
! ATTTTGTGTGAATCGTAACA+CGG + chr5.2:77086533-77086552 MS.gene48046:intron 30.0%
! TTTCCATCTTTTTGGACATA+GGG + chr5.2:77088249-77088268 MS.gene48046:intron 30.0%
!! AGAGGAGTAAGTTATTTCTT+AGG + chr5.2:77087247-77087266 MS.gene48046:intron 30.0%
!! ATAGTACTTTGGTTGGTAAA+GGG + chr5.2:77087865-77087884 MS.gene48046:intron 30.0%
!!! GAAAAGTAATGGACAAGTTT+TGG + chr5.2:77086831-77086850 MS.gene48046:CDS 30.0%
AAGCTTCATGCGATAAATCT+TGG - chr5.2:77086636-77086655 None:intergenic 35.0%
AGAGCAAACTTGAACTCATA+TGG + chr5.2:77087456-77087475 MS.gene48046:intron 35.0%
AGATTTATCGCATGAAGCTT+TGG + chr5.2:77086636-77086655 MS.gene48046:CDS 35.0%
AGCTTCATGCGATAAATCTT+GGG - chr5.2:77086635-77086654 None:intergenic 35.0%
CAAACATAGGTAACCAGTTA+TGG + chr5.2:77088031-77088050 MS.gene48046:intron 35.0%
CACAACCAGAATATCATTAG+AGG - chr5.2:77087403-77087422 None:intergenic 35.0%
CATAAATGGAGGTAAATGGA+TGG - chr5.2:77087352-77087371 None:intergenic 35.0%
CATAACTGGTTACCTATGTT+TGG - chr5.2:77088033-77088052 None:intergenic 35.0%
CCATAGTTCTTAATCTTGGT+AGG - chr5.2:77088316-77088335 None:intergenic 35.0%
CCTACCAAGATTAAGAACTA+TGG + chr5.2:77088313-77088332 MS.gene48046:CDS 35.0%
CTCTCATAAATGGAGGTAAA+TGG - chr5.2:77087356-77087375 None:intergenic 35.0%
CTGTGGAGTTAATGTTAAGT+TGG + chr5.2:77087180-77087199 MS.gene48046:intron 35.0%
GATTTATCGCATGAAGCTTT+GGG + chr5.2:77086637-77086656 MS.gene48046:CDS 35.0%
GTAATAGCTAAAGCAAACAC+AGG - chr5.2:77088218-77088237 None:intergenic 35.0%
GTTCTGTTGTGATTATTGCT+GGG + chr5.2:77087918-77087937 MS.gene48046:intron 35.0%
TAATCTTCTTGTACACCAGA+GGG - chr5.2:77088558-77088577 None:intergenic 35.0%
TACCGTGATACTACTCTAAA+CGG + chr5.2:77088388-77088407 MS.gene48046:CDS 35.0%
TGTCTATCTCTCATAAATGG+AGG - chr5.2:77087363-77087382 None:intergenic 35.0%
TGTGTACGAGGTAGATAAAT+GGG + chr5.2:77087719-77087738 MS.gene48046:intron 35.0%
TGTTCTGTTGTGATTATTGC+TGG + chr5.2:77087917-77087936 MS.gene48046:intron 35.0%
TTTCTTGAGGAAGTTGAAGA+AGG + chr5.2:77086804-77086823 MS.gene48046:CDS 35.0%
! TTCCATCTTTTTGGACATAG+GGG + chr5.2:77088250-77088269 MS.gene48046:intron 35.0%
! TTTTGTGTGAATCGTAACAC+GGG + chr5.2:77086534-77086553 MS.gene48046:intron 35.0%
!! GATAGTACTTTGGTTGGTAA+AGG + chr5.2:77087864-77087883 MS.gene48046:intron 35.0%
!! TAACTCCACAGCTGTTTTAA+GGG - chr5.2:77087171-77087190 None:intergenic 35.0%
!! TTAACTCCACAGCTGTTTTA+AGG - chr5.2:77087172-77087191 None:intergenic 35.0%
!!! ACAAGTTTTGGCTATCAATG+AGG + chr5.2:77086843-77086862 MS.gene48046:CDS 35.0%
!!! TGGCTTTGTAGGTTGTTTTT+AGG - chr5.2:77088597-77088616 None:intergenic 35.0%
AACCCCTATGTCCAAAAAGA+TGG - chr5.2:77088255-77088274 None:intergenic 40.0%
AATAACTTACTCCTCTCCAC+AGG - chr5.2:77087243-77087262 None:intergenic 40.0%
ATAACTTACTCCTCTCCACA+GGG - chr5.2:77087242-77087261 None:intergenic 40.0%
CTAATCTTCTTGTACACCAG+AGG - chr5.2:77088559-77088578 None:intergenic 40.0%
CTAGATTCCACCATGACTTA+GGG - chr5.2:77087698-77087717 None:intergenic 40.0%
CTCTGGTGTACAAGAAGATT+AGG + chr5.2:77088557-77088576 MS.gene48046:CDS 40.0%
GATAGACACAAACGATAGAG+TGG + chr5.2:77087375-77087394 MS.gene48046:intron 40.0%
GCAAACTTGAACTCATATGG+CGG + chr5.2:77087459-77087478 MS.gene48046:intron 40.0%
GTGTGTACGAGGTAGATAAA+TGG + chr5.2:77087718-77087737 MS.gene48046:intron 40.0%
TACTTAGGCTGTGTTTGGAT+TGG + chr5.2:77086934-77086953 MS.gene48046:intron 40.0%
TGGACCCTCTAATGATATTC+TGG + chr5.2:77087395-77087414 MS.gene48046:intron 40.0%
TGTAACCTTTCCCTAAGTCA+TGG + chr5.2:77087685-77087704 MS.gene48046:intron 40.0%
TGTGAGAGAATTCTTGGAGT+AGG + chr5.2:77088187-77088206 MS.gene48046:intron 40.0%
TGTTACTCCGATTGCAAGTA+GGG + chr5.2:77087892-77087911 MS.gene48046:intron 40.0%
TTCCAAAATCAAGTTCCCTC+TGG + chr5.2:77088540-77088559 MS.gene48046:CDS 40.0%
TTCGTGCCAAATCCAAATTC+TGG + chr5.2:77086672-77086691 MS.gene48046:CDS 40.0%
! CATAAACAGGTTTGGCTTCT+TGG - chr5.2:77088617-77088636 None:intergenic 40.0%
! CTTGGGATGTTCATCCTTTT+CGG - chr5.2:77086618-77086637 None:intergenic 40.0%
! GAGTATAATTTTGCACCCTG+TGG + chr5.2:77087224-77087243 MS.gene48046:intron 40.0%
!! TACTTTGGTTGGTAAAGGGA+AGG + chr5.2:77087869-77087888 MS.gene48046:intron 40.0%
!!! AGCTGTTTTAAGGGACTGTT+TGG - chr5.2:77087162-77087181 None:intergenic 40.0%
!!! GTTGTTTTTAGGCTCCTAGT+TGG - chr5.2:77088586-77088605 None:intergenic 40.0%
AACCTTTCCCTAAGTCATGG+TGG + chr5.2:77087688-77087707 MS.gene48046:intron 45.0%
ACAGTCCCTTAAAACAGCTG+TGG + chr5.2:77087163-77087182 MS.gene48046:intron 45.0%
AGAAGATTAGGCCACCAACT+AGG + chr5.2:77088569-77088588 MS.gene48046:CDS 45.0%
CCCAGCTAATCTGTGCAAAA+GGG + chr5.2:77088495-77088514 MS.gene48046:CDS 45.0%
CCTAGATTCCACCATGACTT+AGG - chr5.2:77087699-77087718 None:intergenic 45.0%
GAAACAGTTTCACCAGTACC+AGG + chr5.2:77086571-77086590 MS.gene48046:intron 45.0%
GAACAAGCCCTACTTGCAAT+CGG - chr5.2:77087902-77087921 None:intergenic 45.0%
GACTTGCATAAGCGCTTATG+AGG + chr5.2:77086985-77087004 MS.gene48046:intron 45.0%
GGAGACAATGTACAACGAGA+TGG + chr5.2:77088417-77088436 MS.gene48046:CDS 45.0%
TCCCAGCTAATCTGTGCAAA+AGG + chr5.2:77088494-77088513 MS.gene48046:CDS 45.0%
TTCCACCATGACTTAGGGAA+AGG - chr5.2:77087693-77087712 None:intergenic 45.0%
TTGCGTTATCAGAGTCGTAC+TGG + chr5.2:77088343-77088362 MS.gene48046:CDS 45.0%
TTTCACCAGTACCAGGTTGT+TGG + chr5.2:77086578-77086597 MS.gene48046:CDS 45.0%
! ATATGGCGGCGATTTGACTT+TGG + chr5.2:77087473-77087492 MS.gene48046:intron 45.0%
! CACCAGAGGGAACTTGATTT+TGG - chr5.2:77088545-77088564 None:intergenic 45.0%
! CCTAAGTCATGGTGGAATCT+AGG + chr5.2:77087696-77087715 MS.gene48046:intron 45.0%
! CGCCGTTTAGAGTAGTATCA+CGG - chr5.2:77088393-77088412 None:intergenic 45.0%
! GGATGTTCATCCTTTTCGGT+GGG - chr5.2:77086614-77086633 None:intergenic 45.0%
! GTGTTACTCCGATTGCAAGT+AGG + chr5.2:77087891-77087910 MS.gene48046:intron 45.0%
! TAATTTTGCACCCTGTGGAG+AGG + chr5.2:77087229-77087248 MS.gene48046:intron 45.0%
! TATGGCGGCGATTTGACTTT+GGG + chr5.2:77087474-77087493 MS.gene48046:intron 45.0%
! TCCCTTTTGCACAGATTAGC+TGG - chr5.2:77088499-77088518 None:intergenic 45.0%
! TTTGCACAGATTAGCTGGGA+TGG - chr5.2:77088494-77088513 None:intergenic 45.0%
!! CCCTTTTGCACAGATTAGCT+GGG - chr5.2:77088498-77088517 None:intergenic 45.0%
!! GTTTGGCTTCTTGGCTTTGT+AGG - chr5.2:77088608-77088627 None:intergenic 45.0%
!! GTTTTTAGGCTCCTAGTTGG+TGG - chr5.2:77088583-77088602 None:intergenic 45.0%
ACGAGATGGCATCTCGTCAT+AGG + chr5.2:77088431-77088450 MS.gene48046:CDS 50.0%
CGAGATGGCATCTCGTCATA+GGG + chr5.2:77088432-77088451 MS.gene48046:CDS 50.0%
CTCTTCCAACAACCTGGTAC+TGG - chr5.2:77086586-77086605 None:intergenic 50.0%
GGATTTGGCACGAACCTCAT+TGG - chr5.2:77086666-77086685 None:intergenic 50.0%
GTGGAATCTAGGTGTGTACG+AGG + chr5.2:77087707-77087726 MS.gene48046:intron 50.0%
TACTACTCTAAACGGCGCTG+TGG + chr5.2:77088396-77088415 MS.gene48046:CDS 50.0%
! GAAGTGCTCTTCCAACAACC+TGG - chr5.2:77086592-77086611 None:intergenic 50.0%
! GGGATGTTCATCCTTTTCGG+TGG - chr5.2:77086615-77086634 None:intergenic 50.0%
!! AAGAGCACTTCCCACCGAAA+AGG + chr5.2:77086601-77086620 MS.gene48046:CDS 50.0%
!! GAAGCTTTGGGCAACCAATG+AGG + chr5.2:77086649-77086668 MS.gene48046:CDS 50.0%
TGGCATCTCGTCATAGGGTC+AGG + chr5.2:77088437-77088456 MS.gene48046:CDS 55.0%
! GCACAGATTAGCTGGGATGG+TGG - chr5.2:77088491-77088510 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 77086468 77088639 77086468 ID=MS.gene48046
chr5.2 mRNA 77086468 77088639 77086468 ID=MS.gene48046.t1;Parent=MS.gene48046
chr5.2 exon 77086468 77086482 77086468 ID=MS.gene48046.t1.exon1;Parent=MS.gene48046.t1
chr5.2 CDS 77086468 77086482 77086468 ID=cds.MS.gene48046.t1;Parent=MS.gene48046.t1
chr5.2 exon 77086578 77086693 77086578 ID=MS.gene48046.t1.exon2;Parent=MS.gene48046.t1
chr5.2 CDS 77086578 77086693 77086578 ID=cds.MS.gene48046.t1;Parent=MS.gene48046.t1
chr5.2 exon 77086801 77086864 77086801 ID=MS.gene48046.t1.exon3;Parent=MS.gene48046.t1
chr5.2 CDS 77086801 77086864 77086801 ID=cds.MS.gene48046.t1;Parent=MS.gene48046.t1
chr5.2 exon 77088298 77088639 77088298 ID=MS.gene48046.t1.exon4;Parent=MS.gene48046.t1
chr5.2 CDS 77088298 77088639 77088298 ID=cds.MS.gene48046.t1;Parent=MS.gene48046.t1
Gene Sequence

>MS.gene48046

ATGGTTAACGCTAAGGTATGAATTTTCTTCATTTTTCATTCTTTTCCACCTTTTGAGCTGATTTTATTTTGTGTGAATCGTAACACGGGTATAAACTTTTGTTGAAACAGTTTCACCAGTACCAGGTTGTTGGAAGAGCACTTCCCACCGAAAAGGATGAACATCCCAAGATTTATCGCATGAAGCTTTGGGCAACCAATGAGGTTCGTGCCAAATCCAAATTCTGGTAAGTTTCTAATTCATTATCAAATTCTAATGTTTATGATTTTTTTTTTATAATGATTAACTATTTAATATTAATAACTGTGATATTAATAATGTTAATTGTTGTAGGTATTTCTTGAGGAAGTTGAAGAAGGTTAAGAAAAGTAATGGACAAGTTTTGGCTATCAATGAGGTATGCCCATTCATTTATCGTACCTGTTAATTGAAATTTTATAGAAGGGTTGTAGTTAAGCTAGATTTATACTTAGGCTGTGTTTGGATTGGACTTTTAACCAGCTTATTTGTTTTTATTGACTTGCATAAGCGCTTATGAGGTATTTGTAGAGCTTTTTTTTTTTAGGTAAAGCAAGGTATTTGTAGAGCTTAAGATATCAATTTATATGATATTTAAATGATTTTAGCTCATTTCAATTTGCATGTAAAAGCTTTTATTTGGTAAATACCTACCTTATAAGCACTTGTTTAACCAAACAGTCCCTTAAAACAGCTGTGGAGTTAATGTTAAGTTGGAATAGAAAAAATTAATGATAGGAGTATAATTTTGCACCCTGTGGAGAGGAGTAAGTTATTTCTTAGGCATATATTAGTATATTGTACAGTTGGATGAATTGAAAATGAGTTCTATACTTAGAGAGACTCTCTTAGTCTATTATGTACCATCCATTTACCTCCATTTATGAGAGATAGACACAAACGATAGAGTGGACCCTCTAATGATATTCTGGTTGTGTCTATTTCTCTCATAAATAGAGGGTAGATAAATAGAGCAAACTTGAACTCATATGGCGGCGATTTGACTTTGGGAATTTGTATATTATGTAATGTAATATCTGTCAGTTTTTGGAAGAAAATGTTTTTCTAATCTTTTTTGTTGTCTTTAGCAGAAAATAGTTTTGATTATGAGAAGTTGTTTATTATTTAATATCTGTCACTTTTTGAAAGAAAATGTTTTGTTTCCTTTTTGATGTCTATTCGAAGAAGATAGTTTTCTTTGTAACCTTTCCCTAAGTCATGGTGGAATCTAGGTGTGTACGAGGTAGATAAATGGGTACAAATAAATTGTGATGCTTGAGAAAATTAAGTTTGATGCGGATCTCCATTTTTTTTTATTTGTTGCTTTAAAAGTTAAATAGCATTTTGTGTTCAATTTTAATCAAATTGATTTTAAGTAGATAGTACTTTGGTTGGTAAAGGGAAGGTGTTACTCCGATTGCAAGTAGGGCTTGTTCTGTTGTGATTATTGCTGGGATAAAATTTGCTATGTTAACTTGTTGAGAAGTCACTTGCTAAATATTTGAGTGTAAGCTGTTTTGATTGAAGACTAATTATGTTGAAATCCAAACATAGGTAACCAGTTATGGCAATACATCATTTTAGTTGATTTCTCCTTTAAATTGTATATTGTGACTAATATCATAGTTGAACTTGAAAATTATGCCCCTTTTTTTTATTGTATTTTGTTTCGATTATTCGAAGAAAAGTAATGCTAATTGTTGTGAGAGAATTCTTGGAGTAGGATTTCCCTGTGTTTGCTTTAGCTATTACTTTACCTTCAATTTCCATCTTTTTGGACATAGGGGTTGAAGCTACTTTTTTTTATTGCAGATCTTCGAGAAAAATCCTACCAAGATTAAGAACTATGGAATCTGGTTGCGTTATCAGAGTCGTACTGGTTATCACAATATGTACAAGGAATACCGTGATACTACTCTAAACGGCGCTGTGGAGACAATGTACAACGAGATGGCATCTCGTCATAGGGTCAGGTTTCCCTGCATTCAAATCATTAAGACTGCCACCATCCCAGCTAATCTGTGCAAAAGGGAGAGCACTAAGCAGTTTCACAATTCCAAAATCAAGTTCCCTCTGGTGTACAAGAAGATTAGGCCACCAACTAGGAGCCTAAAAACAACCTACAAAGCCAAGAAGCCAAACCTGTTTATGTGA
Protein sequence

>MS.gene48046.t1

MVNAKFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVETMYNEMASRHRVRFPCIQIIKTATIPANLCKRESTKQFHNSKIKFPLVYKKIRPPTRSLKTTYKAKKPNLFM