AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene022489

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022489.t1 MTR_3g074390 88.867 512 55 1 1 510 1 512 0.0 924
MS.gene022489.t1 MTR_3g074410 80.980 510 96 1 1 510 1 509 0.0 853
MS.gene022489.t1 MTR_3g074380 95.082 366 18 0 1 366 1 366 0.0 701
MS.gene022489.t1 MTR_3g074270 66.135 502 146 4 1 502 1 478 0.0 682
MS.gene022489.t1 MTR_3g008160 52.590 502 229 7 12 508 9 506 0.0 549
MS.gene022489.t1 MTR_3g074340 77.709 323 72 0 188 510 18 340 0.0 533
MS.gene022489.t1 MTR_3g074320 77.399 323 73 0 188 510 18 340 0.0 531
MS.gene022489.t1 MTR_5g006070 50.909 495 231 8 20 508 16 504 0.0 531
MS.gene022489.t1 MTR_3g074370 77.709 323 72 0 188 510 18 340 0.0 531
MS.gene022489.t1 MTR_0204s0020 52.083 480 225 4 20 498 15 490 0.0 529
MS.gene022489.t1 MTR_3g008170 52.929 495 225 6 10 500 8 498 0.0 529
MS.gene022489.t1 MTR_3g074400 62.667 450 114 5 53 481 1 417 0.0 521
MS.gene022489.t1 MTR_5g094760 53.012 498 228 5 1 496 1 494 0.0 520
MS.gene022489.t1 MTR_0204s0020 51.134 485 229 5 15 498 10 487 0.0 519
MS.gene022489.t1 MTR_7g091690 52.610 498 230 5 1 496 1 494 3.64e-180 515
MS.gene022489.t1 MTR_4g116790 50.928 485 233 4 20 503 21 501 6.49e-176 505
MS.gene022489.t1 MTR_5g082540 50.710 493 236 4 20 507 17 507 8.48e-176 504
MS.gene022489.t1 MTR_0204s0040 50.837 478 230 4 20 496 23 496 1.37e-175 504
MS.gene022489.t1 MTR_3g008160 52.278 461 211 7 53 508 1 457 1.47e-175 502
MS.gene022489.t1 MTR_0009s0370 48.214 504 254 5 8 506 3 504 3.68e-174 500
MS.gene022489.t1 MTR_1g038630 49.689 483 239 3 20 500 17 497 6.93e-174 500
MS.gene022489.t1 MTR_4g116770 50.837 478 230 4 20 496 219 692 5.56e-173 504
MS.gene022489.t1 MTR_5g041550 48.638 514 254 6 1 509 1 509 4.40e-172 495
MS.gene022489.t1 MTR_3g093010 48.928 513 251 6 1 508 1 507 4.49e-170 490
MS.gene022489.t1 MTR_5g006070 49.348 460 223 7 53 506 1 456 1.67e-168 484
MS.gene022489.t1 MTR_1g104770 47.036 506 257 7 1 501 1 500 1.47e-167 483
MS.gene022489.t1 MTR_3g023480 47.305 501 257 5 13 508 8 506 1.31e-166 481
MS.gene022489.t1 MTR_4g091370 51.534 489 231 5 20 504 17 503 3.50e-166 480
MS.gene022489.t1 MTR_1g104750 47.036 506 256 8 1 501 1 499 1.39e-165 478
MS.gene022489.t1 MTR_1g104780 48.745 478 235 7 32 503 28 501 3.24e-165 478
MS.gene022489.t1 MTR_8g102860 47.571 494 251 7 21 510 21 510 4.87e-162 470
MS.gene022489.t1 MTR_6g087040 46.784 513 265 8 1 509 1 509 5.77e-162 469
MS.gene022489.t1 MTR_6g088375 46.784 513 265 8 1 509 1 509 5.77e-162 469
MS.gene022489.t1 MTR_1g038600 47.609 481 234 4 20 500 17 479 3.92e-160 464
MS.gene022489.t1 MTR_3g007910 46.230 504 232 8 1 501 1 468 8.21e-156 452
MS.gene022489.t1 MTR_4g090600 50.710 493 236 6 20 508 17 506 3.49e-154 449
MS.gene022489.t1 MTR_3g093060 47.903 453 228 5 53 499 1 451 5.77e-152 442
MS.gene022489.t1 MTR_8g102860 46.753 462 238 7 53 510 1 458 4.00e-148 432
MS.gene022489.t1 MTR_4g116790 50.720 347 168 3 20 365 21 365 7.86e-120 357
MS.gene022489.t1 MTR_3g074330 73.913 161 32 2 1 154 1 158 4.48e-72 227
MS.gene022489.t1 MTR_3g074360 73.913 161 32 2 1 154 1 158 4.48e-72 227
MS.gene022489.t1 MTR_3g074310 73.292 161 33 2 1 154 1 158 2.52e-71 225
MS.gene022489.t1 MTR_4g072030 30.041 486 294 10 30 494 31 491 5.20e-58 201
MS.gene022489.t1 MTR_6g088450 30.652 460 287 9 31 480 63 500 4.97e-57 198
MS.gene022489.t1 MTR_4g069500 28.000 500 314 9 30 508 34 508 1.16e-56 197
MS.gene022489.t1 MTR_4g069500 29.493 434 279 7 96 508 31 458 2.56e-56 195
MS.gene022489.t1 MTR_8g103500 27.778 486 316 9 17 490 9 471 6.52e-54 189
MS.gene022489.t1 MTR_8g077890 30.816 490 284 12 31 493 24 485 2.72e-53 187
MS.gene022489.t1 MTR_3g116240 27.066 484 310 7 30 492 32 493 5.60e-51 182
MS.gene022489.t1 MTR_2g013310 29.325 474 299 10 27 490 53 500 3.05e-50 180
MS.gene022489.t1 MTR_2g013310 30.073 409 270 6 91 490 26 427 1.38e-49 176
MS.gene022489.t1 MTR_5g075300 27.869 488 301 10 31 493 24 485 1.28e-47 172
MS.gene022489.t1 MTR_8g077310 26.824 466 315 5 21 486 42 481 5.49e-47 170
MS.gene022489.t1 MTR_5g096000 50.000 184 70 2 1 184 1 162 1.07e-46 165
MS.gene022489.t1 MTR_5g096000 46.622 148 74 2 359 501 152 299 1.16e-32 127
MS.gene022489.t1 MTR_4g077740 28.361 476 300 13 27 486 46 496 1.45e-45 167
MS.gene022489.t1 MTR_8g077310 27.877 391 275 2 96 486 1 384 1.62e-45 164
MS.gene022489.t1 MTR_7g446340 25.703 498 321 13 23 507 51 512 9.56e-45 165
MS.gene022489.t1 MTR_6g007340 25.703 498 321 13 23 507 51 512 9.56e-45 165
MS.gene022489.t1 MTR_8g077300 27.518 407 278 4 85 486 79 473 9.56e-44 161
MS.gene022489.t1 MTR_7g094450 28.224 411 275 8 82 488 77 471 4.40e-42 157
MS.gene022489.t1 MTR_6g018790 26.004 473 311 8 20 486 99 538 1.82e-41 156
MS.gene022489.t1 MTR_5g020270 26.452 465 314 7 23 486 47 484 2.75e-41 155
MS.gene022489.t1 MTR_5g020270 28.061 392 273 4 96 486 1 384 4.76e-41 152
MS.gene022489.t1 MTR_1g116660 26.338 467 317 8 32 493 41 485 3.29e-40 152
MS.gene022489.t1 MTR_2g020710 26.829 410 271 7 86 486 1 390 5.93e-40 149
MS.gene022489.t1 MTR_2g020710 24.899 494 317 10 8 486 25 479 8.25e-40 150
MS.gene022489.t1 MTR_7g082270 25.702 463 301 9 32 486 71 498 1.68e-39 150
MS.gene022489.t1 MTR_5g019870 26.852 432 279 10 93 493 57 482 1.55e-38 147
MS.gene022489.t1 MTR_4g118610 26.055 403 285 5 85 486 92 482 1.86e-38 147
MS.gene022489.t1 MTR_7g094110 28.818 406 269 8 85 486 82 471 4.17e-38 145
MS.gene022489.t1 MTR_2g049020 29.598 348 214 6 33 370 33 359 7.16e-38 147
MS.gene022489.t1 MTR_7g005910 25.536 466 321 9 32 493 39 482 1.90e-37 144
MS.gene022489.t1 MTR_3g084110 23.729 472 321 9 33 493 35 478 2.53e-37 144
MS.gene022489.t1 MTR_1g022315 25.377 398 277 4 96 486 1 385 1.40e-36 140
MS.gene022489.t1 MTR_1g116650 25.636 472 311 10 28 493 78 515 1.74e-36 142
MS.gene022489.t1 MTR_1g022315 25.428 409 285 4 85 486 89 484 1.80e-36 141
MS.gene022489.t1 MTR_5g077580 24.645 564 307 12 33 505 33 569 2.78e-36 142
MS.gene022489.t1 MTR_2g048720 29.619 341 218 6 33 368 33 356 2.89e-36 142
MS.gene022489.t1 MTR_7g082270 25.183 409 268 7 32 435 71 446 3.44e-35 137
MS.gene022489.t1 MTR_7g113960 24.569 464 311 7 26 486 27 454 5.62e-35 137
MS.gene022489.t1 MTR_4g069500 28.000 325 209 6 203 508 1 319 2.85e-34 132
MS.gene022489.t1 MTR_0064s0040 50.000 136 55 2 20 154 18 141 8.88e-34 125
MS.gene022489.t1 MTR_7g113970 23.769 467 315 8 25 486 61 491 2.49e-33 132
MS.gene022489.t1 MTR_5g020270 24.731 465 301 8 23 486 47 463 2.59e-33 132
MS.gene022489.t1 MTR_8g077310 26.361 349 231 5 21 369 42 364 2.00e-32 128
MS.gene022489.t1 MTR_7g094110 27.654 405 255 8 85 486 82 451 2.54e-31 126
MS.gene022489.t1 MTR_4g013205 26.053 380 264 6 110 486 103 468 1.49e-30 124
MS.gene022489.t1 MTR_3g080240 26.350 463 301 13 31 486 98 527 4.55e-29 120
MS.gene022489.t1 MTR_1g038620 36.875 160 82 3 204 363 50 190 1.07e-28 112
MS.gene022489.t1 MTR_2g026160 27.557 352 229 6 33 375 34 368 1.14e-28 120
MS.gene022489.t1 MTR_2g020710 25.284 352 229 7 8 352 25 349 1.92e-27 114
MS.gene022489.t1 MTR_2g020710 25.284 352 229 7 8 352 25 349 2.66e-27 114
MS.gene022489.t1 MTR_2g020710 28.253 269 184 4 85 352 89 349 2.97e-27 113
MS.gene022489.t1 MTR_6g087910 23.947 380 272 6 110 486 117 482 3.89e-27 114
MS.gene022489.t1 MTR_4g064820 29.201 363 223 12 25 371 95 439 4.63e-26 111
MS.gene022489.t1 MTR_4g118610 24.850 334 238 5 85 417 92 413 6.40e-26 110
MS.gene022489.t1 MTR_1g114280 34.810 158 84 2 349 506 21 159 6.52e-25 101
MS.gene022489.t1 MTR_2g026140 25.360 347 221 8 32 369 30 347 3.38e-22 100
MS.gene022489.t1 MTR_7g113960 24.316 329 222 4 26 354 27 328 4.37e-22 98.6
MS.gene022489.t1 MTR_7g113970 22.993 274 203 3 85 358 102 367 2.27e-21 96.7
MS.gene022489.t1 MTR_3g116060 30.460 174 114 4 105 274 64 234 2.82e-18 88.6
MS.gene022489.t1 MTR_3g118530 29.444 180 124 3 97 274 58 236 3.51e-17 85.1
MS.gene022489.t1 MTR_5g024740 25.862 290 183 9 24 310 2 262 4.82e-17 84.7
MS.gene022489.t1 MTR_3g118530 29.444 180 124 3 97 274 58 236 1.35e-16 83.2
MS.gene022489.t1 MTR_5g044910 27.234 235 151 6 24 256 2 218 3.34e-16 82.0
MS.gene022489.t1 MTR_8g073100 27.660 235 148 6 25 256 3 218 4.16e-16 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene022489.t1 AT1G34580 61.508 504 189 3 1 501 1 502 0.0 638
MS.gene022489.t1 AT1G34580 61.283 452 172 2 53 501 1 452 0.0 579
MS.gene022489.t1 AT5G26340 50.586 512 242 8 1 507 1 506 0.0 535
MS.gene022489.t1 AT1G11260 53.971 491 218 6 20 506 17 503 0.0 532
MS.gene022489.t1 AT4G02050 49.511 511 252 5 1 509 1 507 0.0 524
MS.gene022489.t1 AT4G02050 49.511 511 252 5 1 509 1 507 0.0 524
MS.gene022489.t1 AT3G19940 50.888 507 243 6 1 505 1 503 0.0 521
MS.gene022489.t1 AT3G19930 52.079 505 235 5 1 503 1 500 0.0 518
MS.gene022489.t1 AT3G19930 52.079 505 235 5 1 503 1 500 0.0 518
MS.gene022489.t1 AT1G50310 50.581 516 245 7 1 509 1 513 7.90e-180 515
MS.gene022489.t1 AT4G21480 51.927 493 233 4 13 503 10 500 2.02e-177 508
MS.gene022489.t1 AT5G23270 51.587 504 234 7 1 499 1 499 3.28e-176 506
MS.gene022489.t1 AT5G61520 46.881 497 253 5 19 508 17 509 2.51e-165 478
MS.gene022489.t1 AT1G77210 45.957 507 267 7 1 504 1 503 6.17e-161 466
MS.gene022489.t1 AT1G77210 45.957 507 267 7 1 504 1 503 6.17e-161 466
MS.gene022489.t1 AT5G26250 45.714 490 260 5 20 507 16 501 6.05e-157 456
MS.gene022489.t1 AT3G05960 46.029 491 259 5 20 508 15 501 8.22e-156 454
MS.gene022489.t1 AT5G61520 45.905 464 240 5 52 508 2 461 9.15e-149 434
MS.gene022489.t1 AT1G07340 45.473 486 254 7 21 501 18 497 1.13e-139 412
MS.gene022489.t1 AT1G50310 50.000 362 173 5 154 509 11 370 3.53e-126 373
MS.gene022489.t1 AT1G77210 43.059 353 195 6 154 504 6 354 2.14e-106 322
MS.gene022489.t1 AT2G16120 30.579 484 295 9 30 493 30 492 5.81e-61 209
MS.gene022489.t1 AT2G16130 29.652 489 293 10 30 493 30 492 3.38e-59 204
MS.gene022489.t1 AT3G18830 28.279 488 303 10 30 494 40 503 2.84e-55 194
MS.gene022489.t1 AT2G18480 29.895 475 282 11 40 490 36 483 8.59e-54 189
MS.gene022489.t1 AT4G36670 28.200 500 306 11 30 505 21 491 5.14e-50 179
MS.gene022489.t1 AT1G75220 25.910 467 320 4 23 489 45 485 5.85e-45 165
MS.gene022489.t1 AT1G08900 28.395 405 276 5 85 488 23 414 2.51e-44 162
MS.gene022489.t1 AT1G08900 28.395 405 276 5 85 488 57 448 4.48e-44 162
MS.gene022489.t1 AT1G08900 28.395 405 276 5 85 488 65 456 5.93e-44 162
MS.gene022489.t1 AT1G08900 28.395 405 276 5 85 488 65 456 5.93e-44 162
MS.gene022489.t1 AT2G48020 28.186 408 275 7 85 489 68 460 1.00e-43 161
MS.gene022489.t1 AT2G48020 28.186 408 275 7 85 489 68 460 1.00e-43 161
MS.gene022489.t1 AT2G20780 26.625 477 306 12 23 486 51 496 8.13e-42 157
MS.gene022489.t1 AT1G19450 25.641 468 322 4 23 490 46 487 1.11e-41 156
MS.gene022489.t1 AT5G16150 26.247 461 301 8 32 486 111 538 1.15e-41 157
MS.gene022489.t1 AT5G16150 26.247 461 301 8 32 486 111 538 1.15e-41 157
MS.gene022489.t1 AT5G16150 26.247 461 301 8 32 486 111 538 1.15e-41 157
MS.gene022489.t1 AT5G17010 28.392 479 296 11 27 486 48 498 5.39e-41 154
MS.gene022489.t1 AT5G17010 28.392 479 296 11 27 486 48 498 5.39e-41 154
MS.gene022489.t1 AT5G17010 28.392 479 296 11 27 486 48 498 5.39e-41 154
MS.gene022489.t1 AT2G20780 27.139 409 274 8 90 486 42 438 2.79e-40 152
MS.gene022489.t1 AT5G59250 28.484 488 295 14 25 488 97 554 6.13e-40 152
MS.gene022489.t1 AT1G08930 25.160 469 320 5 21 489 53 490 1.32e-39 150
MS.gene022489.t1 AT1G08930 25.160 469 320 5 21 489 53 490 1.32e-39 150
MS.gene022489.t1 AT1G08890 25.370 473 320 8 21 492 22 462 4.93e-39 148
MS.gene022489.t1 AT5G27350 26.282 468 310 7 21 486 26 460 9.41e-39 147
MS.gene022489.t1 AT1G08900 29.191 346 231 5 85 429 65 397 2.13e-38 145
MS.gene022489.t1 AT3G05165 25.855 468 312 7 21 486 25 459 3.71e-38 145
MS.gene022489.t1 AT3G05165 25.855 468 312 7 21 486 25 459 3.71e-38 145
MS.gene022489.t1 AT3G05165 25.855 468 312 7 21 486 25 459 3.71e-38 145
MS.gene022489.t1 AT1G30220 30.769 351 213 7 33 377 35 361 7.21e-38 147
MS.gene022489.t1 AT3G05155 26.173 405 279 8 85 486 67 454 7.77e-38 144
MS.gene022489.t1 AT3G05160 26.750 400 281 4 87 486 14 401 1.15e-37 143
MS.gene022489.t1 AT3G05160 26.750 400 281 4 87 486 14 401 1.15e-37 143
MS.gene022489.t1 AT3G05160 25.322 466 317 6 21 486 16 450 1.20e-37 144
MS.gene022489.t1 AT1G54730 26.247 461 304 9 32 489 38 465 1.61e-37 144
MS.gene022489.t1 AT3G05400 27.114 402 281 5 85 486 66 455 2.55e-37 143
MS.gene022489.t1 AT3G03090 28.238 471 293 12 34 486 55 498 7.79e-37 142
MS.gene022489.t1 AT2G43330 24.580 476 323 10 30 495 35 484 1.14e-35 139
MS.gene022489.t1 AT4G04760 27.007 411 281 6 85 490 12 408 2.47e-35 137
MS.gene022489.t1 AT4G04750 26.406 409 281 5 85 488 76 469 2.60e-35 138
MS.gene022489.t1 AT4G04750 26.406 409 281 5 85 488 76 469 2.60e-35 138
MS.gene022489.t1 AT4G04760 27.007 411 281 6 85 490 71 467 4.56e-35 137
MS.gene022489.t1 AT5G18840 24.390 410 283 6 85 486 84 474 4.67e-35 137
MS.gene022489.t1 AT3G05400 28.726 369 250 6 119 486 79 435 6.65e-35 136
MS.gene022489.t1 AT4G04750 26.406 409 281 5 85 488 120 513 7.81e-35 137
MS.gene022489.t1 AT3G05165 25.428 409 274 6 21 429 25 402 2.29e-34 135
MS.gene022489.t1 AT3G05165 26.034 411 269 7 21 429 25 402 5.91e-34 134
MS.gene022489.t1 AT3G05165 26.034 411 269 7 21 429 25 402 5.91e-34 134
MS.gene022489.t1 AT5G27360 23.718 468 322 6 21 486 30 464 8.38e-34 134
MS.gene022489.t1 AT1G54730 26.202 416 272 8 32 445 38 420 1.07e-33 132
MS.gene022489.t1 AT1G54730 25.708 459 288 9 32 489 38 444 1.42e-33 132
MS.gene022489.t1 AT5G27360 23.718 468 322 6 21 486 78 512 1.59e-33 134
MS.gene022489.t1 AT3G05150 24.532 481 327 10 12 489 21 468 1.13e-32 130
MS.gene022489.t1 AT3G05150 24.686 478 324 10 12 486 21 465 1.20e-32 130
MS.gene022489.t1 AT3G05150 24.686 478 324 10 12 486 21 465 1.20e-32 130
MS.gene022489.t1 AT4G16480 27.548 363 229 7 23 372 24 365 2.87e-32 130
MS.gene022489.t1 AT4G16480 27.548 363 229 7 23 372 24 365 2.87e-32 130
MS.gene022489.t1 AT4G16480 27.548 363 229 7 23 372 24 365 2.87e-32 130
MS.gene022489.t1 AT4G04760 25.672 409 286 6 85 490 71 464 1.00e-31 127
MS.gene022489.t1 AT5G27360 25.070 355 254 5 132 486 18 360 2.01e-30 122
MS.gene022489.t1 AT5G27360 25.070 355 254 5 132 486 18 360 2.01e-30 122
MS.gene022489.t1 AT1G54730 25.604 414 256 8 32 445 38 399 7.45e-30 121
MS.gene022489.t1 AT1G79820 26.866 402 265 11 92 486 107 486 2.51e-29 121
MS.gene022489.t1 AT1G79820 26.866 402 265 11 92 486 107 486 2.51e-29 121
MS.gene022489.t1 AT1G67300 26.286 350 231 7 99 439 107 438 2.02e-28 118
MS.gene022489.t1 AT2G48020 27.915 283 195 4 85 366 68 342 2.91e-28 116
MS.gene022489.t1 AT1G54730 25.980 408 265 9 32 437 38 410 4.55e-28 116
MS.gene022489.t1 AT1G54730 25.980 408 265 9 32 437 38 410 4.55e-28 116
MS.gene022489.t1 AT1G67300 26.857 350 228 7 99 439 107 437 6.32e-28 117
MS.gene022489.t1 AT1G67300 26.857 350 228 7 99 439 107 437 6.32e-28 117
MS.gene022489.t1 AT2G48020 27.778 270 187 3 85 354 68 329 2.24e-27 113
MS.gene022489.t1 AT1G67300 26.361 349 229 7 99 438 107 436 2.55e-27 114
MS.gene022489.t1 AT1G67300 26.361 349 229 7 99 438 107 436 2.55e-27 114
MS.gene022489.t1 AT3G20460 25.871 402 286 5 85 486 93 482 2.65e-27 115
MS.gene022489.t1 AT2G35740 25.275 364 236 9 26 375 26 367 3.03e-27 115
MS.gene022489.t1 AT3G05155 26.296 270 188 3 85 354 67 325 2.51e-26 109
MS.gene022489.t1 AT1G67300 26.901 342 222 7 99 431 107 429 2.65e-26 111
MS.gene022489.t1 AT1G67300 26.901 342 222 7 99 431 107 429 2.65e-26 111
MS.gene022489.t1 AT1G05030 25.325 462 305 13 32 486 85 513 4.73e-26 112
MS.gene022489.t1 AT1G79820 26.361 349 233 9 92 436 107 435 8.58e-26 110
MS.gene022489.t1 AT1G54730 26.625 323 210 6 32 354 38 333 1.49e-25 107
MS.gene022489.t1 AT1G08920 24.265 408 285 6 85 486 72 461 1.98e-25 109
MS.gene022489.t1 AT1G05030 25.432 405 278 10 90 486 73 461 2.50e-25 109
MS.gene022489.t1 AT1G54730 26.846 298 194 5 32 329 38 311 5.36e-25 105
MS.gene022489.t1 AT1G54730 26.846 298 194 5 32 329 38 311 5.36e-25 105
MS.gene022489.t1 AT1G54730 26.846 298 194 5 32 329 38 311 2.04e-24 105
MS.gene022489.t1 AT1G08920 22.469 405 303 4 85 486 72 468 2.09e-24 106
MS.gene022489.t1 AT5G27360 21.975 405 281 6 21 423 30 401 3.32e-23 102
MS.gene022489.t1 AT1G08920 24.501 351 241 6 85 429 72 404 3.05e-22 99.8
MS.gene022489.t1 AT5G17010 26.004 473 241 16 34 486 52 435 3.61e-22 99.4
MS.gene022489.t1 AT3G51490 26.587 252 165 6 25 274 3 236 4.15e-20 94.4
MS.gene022489.t1 AT3G51490 26.587 252 165 6 25 274 3 236 4.42e-20 94.4
MS.gene022489.t1 AT4G35300 32.086 187 123 4 90 274 52 236 2.93e-19 91.7
MS.gene022489.t1 AT4G35300 32.086 187 123 4 90 274 52 236 2.93e-19 91.7
MS.gene022489.t1 AT4G35300 32.086 187 123 4 90 274 52 236 2.93e-19 91.7
MS.gene022489.t1 AT4G35300 32.086 187 123 4 90 274 52 236 3.29e-19 91.7
MS.gene022489.t1 AT4G35300 32.086 187 123 4 90 274 52 236 3.29e-19 91.7
MS.gene022489.t1 AT4G35300 32.086 187 123 4 90 274 52 236 3.29e-19 91.7
MS.gene022489.t1 AT4G35300 32.086 187 123 4 90 274 52 236 3.29e-19 91.7
MS.gene022489.t1 AT4G35300 32.086 187 123 4 90 274 52 236 3.29e-19 91.7
MS.gene022489.t1 AT4G35300 32.086 187 123 4 90 274 52 236 3.29e-19 91.7
MS.gene022489.t1 AT4G35300 32.086 187 123 4 90 274 52 236 3.29e-19 91.7
MS.gene022489.t1 AT3G51490 28.877 187 129 4 90 274 2 186 3.34e-19 91.7
MS.gene022489.t1 AT1G20840 28.436 211 141 4 78 279 30 239 8.15e-19 90.5
MS.gene022489.t1 AT1G20840 28.436 211 141 4 78 279 30 239 8.15e-19 90.5
MS.gene022489.t1 AT1G79820 24.000 400 231 10 92 486 107 438 2.76e-18 87.8
MS.gene022489.t1 AT1G79820 23.352 364 210 9 128 486 77 376 1.35e-14 75.9

Find 112 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATATTCCCATGCTCATTT+TGG 0.112731 3.2:+66933008 MS.gene022489:CDS
GGATATGACATTGGAATTTC+AGG 0.174947 3.2:+66932612 MS.gene022489:CDS
CCTGTGGTTCTTATATTTAC+AGG 0.188974 3.2:-66934244 None:intergenic
TTAAAAGCGCCTCGCCATTT+TGG 0.225068 3.2:-66933372 None:intergenic
TGTTTATACTCTGCTGGTTT+TGG 0.264387 3.2:+66934175 MS.gene022489:CDS
ATTGTTGGTGGTGCTATTAA+TGG 0.274425 3.2:+66932976 MS.gene022489:CDS
GCTGCCTTCCTTAAAATATC+TGG 0.289328 3.2:-66932793 None:intergenic
CTCTTCCATTCTGTGGGCTT+GGG 0.292972 3.2:+66933807 MS.gene022489:CDS
CCTCTTCCATTCTGTGGGCT+TGG 0.298443 3.2:+66933806 MS.gene022489:CDS
CCAGATGCTGCCATCAATAT+TGG 0.323176 3.2:+66932525 MS.gene022489:CDS
CGAAGAATCTTGTTCATAAC+CGG 0.330741 3.2:+66933921 MS.gene022489:CDS
CGAAGAAACGTCATCATAAT+AGG 0.339968 3.2:+66932940 MS.gene022489:CDS
ATGTTATGTCACTTTAAGTT+TGG 0.344402 3.2:+66934331 MS.gene022489:CDS
TATGGGGAAAACATTGGTTT+TGG 0.349042 3.2:+66934455 MS.gene022489:CDS
ACATGCATCGTTGCTGCTTC+CGG 0.358767 3.2:+66932576 MS.gene022489:CDS
CTATTATGTTTATACTCTGC+TGG 0.362807 3.2:+66934169 MS.gene022489:CDS
CATTATGATGTTTGTCTGCT+TGG 0.369746 3.2:+66933947 MS.gene022489:CDS
TATCTTGCCACCAATATTGA+TGG 0.389773 3.2:-66932535 None:intergenic
TTAATTTCTGCCATTGTACT+TGG 0.400667 3.2:+66933843 MS.gene022489:CDS
GCAGTGGTGTCTGGTGTTGA+TGG 0.402312 3.2:+66934103 MS.gene022489:CDS
CTTCTTGTTCTATGCTGGTT+GGG 0.406015 3.2:+66934357 MS.gene022489:CDS
CCTTCTTGTTCTATGCTGGT+TGG 0.407272 3.2:+66934356 MS.gene022489:CDS
GGAGCCTTCTTGTTCTATGC+TGG 0.408479 3.2:+66934352 MS.gene022489:CDS
AAAGCCTTACGCAAAATTAG+AGG 0.410530 3.2:+66933594 MS.gene022489:CDS
CCACGTTCGACTAAGCTGTT+GGG 0.414673 3.2:-66933552 None:intergenic
TGGATTCAATGTACACCATA+TGG 0.418769 3.2:+66934437 MS.gene022489:CDS
ACGTCTTCTCTTTATCTAGC+TGG 0.428341 3.2:+66932871 MS.gene022489:CDS
CCAATATTGATGGCAGCATC+TGG 0.432816 3.2:-66932525 None:intergenic
GGTGGTGCCCTCTTTATTGT+TGG 0.444551 3.2:+66932961 MS.gene022489:CDS
TGTTGATCCCGGTAAGTTGT+TGG 0.450297 3.2:-66933761 None:intergenic
ACCACGTTCGACTAAGCTGT+TGG 0.458442 3.2:-66933553 None:intergenic
ACCTAACCTCTTCCATTCTG+TGG 0.461623 3.2:+66933800 MS.gene022489:CDS
AAGGGAATTCCTTTAGTCTC+AGG 0.463134 3.2:-66934415 None:intergenic
GGAGTTGGTGTAGTCGCTGC+AGG 0.467474 3.2:+66933417 MS.gene022489:CDS
CCTAACCTCTTCCATTCTGT+GGG 0.469888 3.2:+66933801 MS.gene022489:CDS
CAACAAAACCGGCAGAGATA+AGG 0.471435 3.2:-66933887 None:intergenic
GTGTCTAACCTTATCTCTGC+CGG 0.472009 3.2:+66933879 MS.gene022489:CDS
CCCACAGAATGGAAGAGGTT+AGG 0.476541 3.2:-66933801 None:intergenic
GGATTCAATGTACACCATAT+GGG 0.477310 3.2:+66934438 MS.gene022489:CDS
GGTCGTGGGGCCCTCTAACA+TGG 0.478479 3.2:+66934200 MS.gene022489:CDS
CTGTGGTTCTTATATTTACA+GGG 0.480105 3.2:-66934243 None:intergenic
TACTAATATTGCATTCCCCT+TGG 0.480612 3.2:-66934140 None:intergenic
ATTGTGCTAGCAGTGGTGTC+TGG 0.481749 3.2:+66934094 MS.gene022489:CDS
GAAAGCGACGATGTTGATCC+CGG 0.488081 3.2:-66933772 None:intergenic
CCTGCAGTTGTAATGACAAT+TGG 0.493710 3.2:+66933507 MS.gene022489:CDS
ACCAAATCGATCAACAAAAC+CGG 0.494702 3.2:-66933898 None:intergenic
CTTGGAATAAGCCATGTTAG+AGG 0.494856 3.2:-66934211 None:intergenic
GGTGCCCTCTTTATTGTTGG+TGG 0.497074 3.2:+66932964 MS.gene022489:CDS
TGGGGATGGAGACTCTCTCT+TGG 0.498033 3.2:+66933471 MS.gene022489:CDS
CGATTTGTTAAAGGAGAAGA+TGG 0.500703 3.2:+66934481 MS.gene022489:CDS
TCTCCATCCCCATGTGTGCT+TGG 0.503665 3.2:-66933460 None:intergenic
AATAGCTATGCTTTGTCCTG+TGG 0.505069 3.2:-66934260 None:intergenic
AGCAAAGTCACCGCGTGGTA+TGG 0.506861 3.2:+66932916 MS.gene022489:CDS
TTAATAAGTTCTTCTAACTC+AGG 0.509188 3.2:-66933636 None:intergenic
CCATCCCCATGTGTGCTTGG+CGG 0.515790 3.2:-66933457 None:intergenic
TGAGACTAAAGGAATTCCCT+TGG 0.516494 3.2:+66934417 MS.gene022489:CDS
GGGGAATGCAATATTAGTAT+TGG 0.522711 3.2:+66934144 MS.gene022489:CDS
ACGGCACCGCCAAGCACACA+TGG 0.525868 3.2:+66933451 MS.gene022489:CDS
AATTGGTTCCTTCCTCATAA+CGG 0.526052 3.2:+66933524 MS.gene022489:CDS
TATGGTGTACATTGAATCCA+AGG 0.528540 3.2:-66934434 None:intergenic
CGGTGACTTTGCTAGCTGCA+AGG 0.530108 3.2:-66932906 None:intergenic
CCAATTGTCATTACAACTGC+AGG 0.530129 3.2:-66933507 None:intergenic
TGGTGCTATTAATGGTGGTT+CGG 0.531917 3.2:+66932984 MS.gene022489:CDS
CACGTTCGACTAAGCTGTTG+GGG 0.538498 3.2:-66933551 None:intergenic
AAGAGAGTATCGACCTCACT+TGG 0.538643 3.2:+66933713 MS.gene022489:CDS
TAACTCAGGTTCAATATCTA+CGG 0.538681 3.2:-66933622 None:intergenic
CCGCCAAGCACACATGGGGA+TGG 0.549134 3.2:+66933457 MS.gene022489:CDS
CCAAGCCCACAGAATGGAAG+AGG 0.560247 3.2:-66933806 None:intergenic
TAGCACCACCAACAATAAAG+AGG 0.563652 3.2:-66932969 None:intergenic
GGTGACTTTGCTAGCTGCAA+GGG 0.565981 3.2:-66932905 None:intergenic
TTTACAGGGAAAATCTCACT+TGG 0.566699 3.2:-66934229 None:intergenic
TCTGTGGGCTTGGGACATGA+TGG 0.566874 3.2:+66933816 MS.gene022489:CDS
CATGTCCCAAGCCCACAGAA+TGG 0.569588 3.2:-66933812 None:intergenic
AACACGACCCAAAATGAGCA+TGG 0.570691 3.2:-66933016 None:intergenic
GTTGGTGGTGCTATTAATGG+TGG 0.572136 3.2:+66932979 MS.gene022489:CDS
ACACCATATGGGGAAAACAT+TGG 0.572553 3.2:+66934449 MS.gene022489:CDS
CCTGTAAATATAAGAACCAC+AGG 0.573263 3.2:+66934244 MS.gene022489:CDS
GGCTGGTGGGGTATTTGCTG+TGG 0.574846 3.2:+66932494 MS.gene022489:CDS
GATGCTGCCATCAATATTGG+TGG 0.590546 3.2:+66932528 MS.gene022489:CDS
TTGGAATAAGCCATGTTAGA+GGG 0.596308 3.2:-66934210 None:intergenic
GAAGAATCTTGTTCATAACC+GGG 0.599176 3.2:+66933922 MS.gene022489:CDS
GACAAACATCATAATGCCCC+CGG 0.601203 3.2:-66933940 None:intergenic
TGCATCGTTGCTGCTTCCGG+TGG 0.604561 3.2:+66932579 MS.gene022489:CDS
AGCACCACCAACAATAAAGA+GGG 0.605228 3.2:-66932968 None:intergenic
TGGTACAAATGACATATCCA+AGG 0.605738 3.2:+66934123 MS.gene022489:CDS
CGGCACCGCCAAGCACACAT+GGG 0.606397 3.2:+66933452 MS.gene022489:CDS
TTCAGGAGGTGTTACAACAA+TGG 0.606793 3.2:+66932747 MS.gene022489:intron
GTATCGACCTCACTTGGTGA+TGG 0.608237 3.2:+66933719 MS.gene022489:CDS
GATTCAATGTACACCATATG+GGG 0.610171 3.2:+66934439 MS.gene022489:CDS
GCGAATGCCATCACCAAGTG+AGG 0.611968 3.2:-66933726 None:intergenic
CAGAGATAAGGTTAGACACA+AGG 0.612076 3.2:-66933875 None:intergenic
GCAATTTCAGATAGATACAA+TGG 0.614599 3.2:-66933345 None:intergenic
AAGGTTAGACACAAGGCTAA+CGG 0.616354 3.2:-66933868 None:intergenic
ACACGACCCAAAATGAGCAT+GGG 0.620677 3.2:-66933015 None:intergenic
GGTACAAATGACATATCCAA+GGG 0.626581 3.2:+66934124 MS.gene022489:CDS
CCAACCAGCATAGAACAAGA+AGG 0.632155 3.2:-66934356 None:intergenic
AAGAATCTTGTTCATAACCG+GGG 0.636667 3.2:+66933923 MS.gene022489:CDS
GGCACCGCCAAGCACACATG+GGG 0.639282 3.2:+66933453 MS.gene022489:CDS
CCCAACAGCTTAGTCGAACG+TGG 0.654800 3.2:+66933552 MS.gene022489:CDS
AGAATCTTGTTCATAACCGG+GGG 0.669322 3.2:+66933924 MS.gene022489:CDS
CTCAGGTTCAATATCTACGG+AGG 0.669894 3.2:-66933619 None:intergenic
TTCAGATAGATACAATGGTG+CGG 0.672267 3.2:-66933340 None:intergenic
AGAAACGTCATCATAATAGG+TGG 0.673000 3.2:+66932943 MS.gene022489:CDS
GCTGCAGGCTGCATAAACTA+CGG 0.674975 3.2:+66933432 MS.gene022489:CDS
TGTGTCCATTGTGCTAGCAG+TGG 0.678099 3.2:+66934087 MS.gene022489:CDS
AGACACCACTGCTAGCACAA+TGG 0.679999 3.2:-66934092 None:intergenic
ATGGTGTACATTGAATCCAA+GGG 0.688425 3.2:-66934433 None:intergenic
GCTAACGGATCCAAGTACAA+TGG 0.704332 3.2:-66933853 None:intergenic
CAGCTAGCAAAGTCACCGCG+TGG 0.728015 3.2:+66932911 MS.gene022489:CDS
ACGTTCGACTAAGCTGTTGG+GGG 0.743564 3.2:-66933550 None:intergenic
GTACAAATGACATATCCAAG+GGG 0.751900 3.2:+66934125 MS.gene022489:CDS
GTTTCTTCGACCATACCACG+CGG 0.876756 3.2:-66932926 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTAATTCAAATATAATA+AGG - chr3.2:66932666-66932685 None:intergenic 10.0%
!! AATTTAATAAATAGATAGTT+AGG - chr3.2:66933988-66934007 None:intergenic 10.0%
!!! AACAATTATTTTATGTAAAA+AGG + chr3.2:66933180-66933199 MS.gene022489:intron 10.0%
!!! TAAATAATTAGTTCTTAATT+TGG + chr3.2:66933098-66933117 MS.gene022489:intron 10.0%
!! ACACAAAAAATTTAATTAGT+AGG - chr3.2:66934049-66934068 None:intergenic 15.0%
!!! CTTTTTAATATGGTTTTAAA+GGG - chr3.2:66933696-66933715 None:intergenic 15.0%
!!! TCTTTTTAATATGGTTTTAA+AGG - chr3.2:66933697-66933716 None:intergenic 15.0%
!!! TTAATTATTATTTTACCAAC+AGG + chr3.2:66933317-66933336 MS.gene022489:intron 15.0%
!! AATGCAGTTGAAAATTTAAA+AGG - chr3.2:66933299-66933318 None:intergenic 20.0%
!! TACAACATTAATGATTGTTT+AGG - chr3.2:66933131-66933150 None:intergenic 20.0%
!!! AATTCTTTCCAGATATTTTA+AGG + chr3.2:66932785-66932804 MS.gene022489:CDS 20.0%
!!! AGGAGTCTTTAAAAAAAAAA+AGG - chr3.2:66933279-66933298 None:intergenic 20.0%
!!! TTTTATGTAAAAAGGAATAG+AGG + chr3.2:66933188-66933207 MS.gene022489:intron 20.0%
! TTAATAAGTTCTTCTAACTC+AGG - chr3.2:66933639-66933658 None:intergenic 25.0%
!! TCGATACTCTCTTTTTAATA+TGG - chr3.2:66933706-66933725 None:intergenic 25.0%
!!! ATGTTATGTCACTTTAAGTT+TGG + chr3.2:66934331-66934350 MS.gene022489:CDS 25.0%
!!! GGAAAGAATTTTTGAAGAAA+GGG - chr3.2:66932775-66932794 None:intergenic 25.0%
!!! TGGAAAGAATTTTTGAAGAA+AGG - chr3.2:66932776-66932795 None:intergenic 25.0%
AACTCAAGACAATTATAGTG+AGG - chr3.2:66933251-66933270 None:intergenic 30.0%
CTATTATGTTTATACTCTGC+TGG + chr3.2:66934169-66934188 MS.gene022489:CDS 30.0%
CTGTGGTTCTTATATTTACA+GGG - chr3.2:66934246-66934265 None:intergenic 30.0%
GCAATTTCAGATAGATACAA+TGG - chr3.2:66933348-66933367 None:intergenic 30.0%
TAACTCAGGTTCAATATCTA+CGG - chr3.2:66933625-66933644 None:intergenic 30.0%
TTAATTTCTGCCATTGTACT+TGG + chr3.2:66933843-66933862 MS.gene022489:CDS 30.0%
TTGTGAAAATGTCGAATTTC+AGG + chr3.2:66932730-66932749 MS.gene022489:intron 30.0%
! AAATATTCCCATGCTCATTT+TGG + chr3.2:66933008-66933027 MS.gene022489:CDS 30.0%
! AATATTCCCATGCTCATTTT+GGG + chr3.2:66933009-66933028 MS.gene022489:CDS 30.0%
! CTTCTTTTTGGATATGACAT+TGG + chr3.2:66932603-66932622 MS.gene022489:CDS 30.0%
!! CTTTCCAGATATTTTAAGGA+AGG + chr3.2:66932789-66932808 MS.gene022489:CDS 30.0%
!! TTTCAATTCTTTTTGGGAGT+TGG + chr3.2:66933402-66933421 MS.gene022489:CDS 30.0%
!!! AGTCGCAAAACACTTTTTTT+TGG + chr3.2:66933075-66933094 MS.gene022489:intron 30.0%
!!! TTTTGGTGTCGATTTGTTAA+AGG + chr3.2:66934472-66934491 MS.gene022489:CDS 30.0%
AAAGCCTTACGCAAAATTAG+AGG + chr3.2:66933594-66933613 MS.gene022489:CDS 35.0%
AAGAATCTTGTTCATAACCG+GGG + chr3.2:66933923-66933942 MS.gene022489:CDS 35.0%
ACCAAATCGATCAACAAAAC+CGG - chr3.2:66933901-66933920 None:intergenic 35.0%
AGAAACGTCATCATAATAGG+TGG + chr3.2:66932943-66932962 MS.gene022489:CDS 35.0%
AGACAATTATAGTGAGGTAG+AGG - chr3.2:66933245-66933264 None:intergenic 35.0%
ATATCCAAAAAGAAGACCAC+CGG - chr3.2:66932598-66932617 None:intergenic 35.0%
ATGGTGTACATTGAATCCAA+GGG - chr3.2:66934436-66934455 None:intergenic 35.0%
CATTATGATGTTTGTCTGCT+TGG + chr3.2:66933947-66933966 MS.gene022489:CDS 35.0%
CCTGTAAATATAAGAACCAC+AGG + chr3.2:66934244-66934263 MS.gene022489:CDS 35.0%
CCTGTGGTTCTTATATTTAC+AGG - chr3.2:66934247-66934266 None:intergenic 35.0%
CGAAGAAACGTCATCATAAT+AGG + chr3.2:66932940-66932959 MS.gene022489:CDS 35.0%
CGAAGAATCTTGTTCATAAC+CGG + chr3.2:66933921-66933940 MS.gene022489:CDS 35.0%
CGGTAAGTTGTTGGAAAAAT+GGG - chr3.2:66933755-66933774 None:intergenic 35.0%
GAAGAATCTTGTTCATAACC+GGG + chr3.2:66933922-66933941 MS.gene022489:CDS 35.0%
GATTCAATGTACACCATATG+GGG + chr3.2:66934439-66934458 MS.gene022489:CDS 35.0%
GGATATGACATTGGAATTTC+AGG + chr3.2:66932612-66932631 MS.gene022489:CDS 35.0%
GGATTCAATGTACACCATAT+GGG + chr3.2:66934438-66934457 MS.gene022489:CDS 35.0%
GGGGAATGCAATATTAGTAT+TGG + chr3.2:66934144-66934163 MS.gene022489:CDS 35.0%
GGTACAAATGACATATCCAA+GGG + chr3.2:66934124-66934143 MS.gene022489:CDS 35.0%
GTACAAATGACATATCCAAG+GGG + chr3.2:66934125-66934144 MS.gene022489:CDS 35.0%
TACTAATATTGCATTCCCCT+TGG - chr3.2:66934143-66934162 None:intergenic 35.0%
TAGAGGTAAAACGAACATGA+GGG - chr3.2:66933228-66933247 None:intergenic 35.0%
TATCTTGCCACCAATATTGA+TGG - chr3.2:66932538-66932557 None:intergenic 35.0%
TATGGTGTACATTGAATCCA+AGG - chr3.2:66934437-66934456 None:intergenic 35.0%
TCCCAAAAAGAATTGAAAGC+CGG - chr3.2:66933400-66933419 None:intergenic 35.0%
TGAAAATGTCGAATTTCAGG+AGG + chr3.2:66932733-66932752 MS.gene022489:intron 35.0%
TGGATTCAATGTACACCATA+TGG + chr3.2:66934437-66934456 MS.gene022489:CDS 35.0%
TGGTACAAATGACATATCCA+AGG + chr3.2:66934123-66934142 MS.gene022489:CDS 35.0%
TTCAGATAGATACAATGGTG+CGG - chr3.2:66933343-66933362 None:intergenic 35.0%
TTGGAATAAGCCATGTTAGA+GGG - chr3.2:66934213-66934232 None:intergenic 35.0%
TTTACAGGGAAAATCTCACT+TGG - chr3.2:66934232-66934251 None:intergenic 35.0%
! AAACCAATGTTTTCCCCATA+TGG - chr3.2:66934455-66934474 None:intergenic 35.0%
! AATTGGTTCCTTCCTCATAA+CGG + chr3.2:66933524-66933543 MS.gene022489:CDS 35.0%
! CATTTTTCCAACAACTTACC+GGG + chr3.2:66933754-66933773 MS.gene022489:CDS 35.0%
! TTTTTCTTGCCTGAGACTAA+AGG + chr3.2:66934406-66934425 MS.gene022489:CDS 35.0%
!! ACCGGCTTTCAATTCTTTTT+GGG + chr3.2:66933396-66933415 MS.gene022489:CDS 35.0%
!! ATTGTTGGTGGTGCTATTAA+TGG + chr3.2:66932976-66932995 MS.gene022489:CDS 35.0%
!! ATTTTGGGTCGTGTTTTTCT+TGG + chr3.2:66933024-66933043 MS.gene022489:CDS 35.0%
!! CCATTTTTCCAACAACTTAC+CGG + chr3.2:66933753-66933772 MS.gene022489:CDS 35.0%
!! CGATTTGTTAAAGGAGAAGA+TGG + chr3.2:66934481-66934500 MS.gene022489:CDS 35.0%
!! TTTTGGGTCGTGTTTTTCTT+GGG + chr3.2:66933025-66933044 MS.gene022489:CDS 35.0%
!!! TACCGGCTTTCAATTCTTTT+TGG + chr3.2:66933395-66933414 MS.gene022489:CDS 35.0%
!!! TATGGGGAAAACATTGGTTT+TGG + chr3.2:66934455-66934474 MS.gene022489:CDS 35.0%
!!! TGTTTATACTCTGCTGGTTT+TGG + chr3.2:66934175-66934194 MS.gene022489:CDS 35.0%
AAGGGAATTCCTTTAGTCTC+AGG - chr3.2:66934418-66934437 None:intergenic 40.0%
AAGGTTAGACACAAGGCTAA+CGG - chr3.2:66933871-66933890 None:intergenic 40.0%
AATAGCTATGCTTTGTCCTG+TGG - chr3.2:66934263-66934282 None:intergenic 40.0%
ACACCATATGGGGAAAACAT+TGG + chr3.2:66934449-66934468 MS.gene022489:CDS 40.0%
ACGTCTTCTCTTTATCTAGC+TGG + chr3.2:66932871-66932890 MS.gene022489:CDS 40.0%
AGAATCTTGTTCATAACCGG+GGG + chr3.2:66933924-66933943 MS.gene022489:CDS 40.0%
AGAGGTAAAACGAACATGAG+GGG - chr3.2:66933227-66933246 None:intergenic 40.0%
AGCACCACCAACAATAAAGA+GGG - chr3.2:66932971-66932990 None:intergenic 40.0%
CAGAGATAAGGTTAGACACA+AGG - chr3.2:66933878-66933897 None:intergenic 40.0%
CCAATTGTCATTACAACTGC+AGG - chr3.2:66933510-66933529 None:intergenic 40.0%
CCGGTAAGTTGTTGGAAAAA+TGG - chr3.2:66933756-66933775 None:intergenic 40.0%
CCTGCAGTTGTAATGACAAT+TGG + chr3.2:66933507-66933526 MS.gene022489:CDS 40.0%
CTTGGAATAAGCCATGTTAG+AGG - chr3.2:66934214-66934233 None:intergenic 40.0%
GCTGCCTTCCTTAAAATATC+TGG - chr3.2:66932796-66932815 None:intergenic 40.0%
GTAGAGGTAAAACGAACATG+AGG - chr3.2:66933229-66933248 None:intergenic 40.0%
TAGCACCACCAACAATAAAG+AGG - chr3.2:66932972-66932991 None:intergenic 40.0%
TGAGACTAAAGGAATTCCCT+TGG + chr3.2:66934417-66934436 MS.gene022489:CDS 40.0%
! CTTCTTGTTCTATGCTGGTT+GGG + chr3.2:66934357-66934376 MS.gene022489:CDS 40.0%
! GGATCCTCTAATTTTGCGTA+AGG - chr3.2:66933601-66933620 None:intergenic 40.0%
! GTCGTGTTTTTCTTGGGTTT+GGG + chr3.2:66933031-66933050 MS.gene022489:CDS 40.0%
! TCGTGTTTTTCTTGGGTTTG+GGG + chr3.2:66933032-66933051 MS.gene022489:CDS 40.0%
!! GATATTTTAAGGAAGGCAGC+TGG + chr3.2:66932796-66932815 MS.gene022489:CDS 40.0%
!! TGGTGCTATTAATGGTGGTT+CGG + chr3.2:66932984-66933003 MS.gene022489:CDS 40.0%
!! TTCAGGAGGTGTTACAACAA+TGG + chr3.2:66932747-66932766 MS.gene022489:intron 40.0%
!!! TATACTCTGCTGGTTTTGGT+TGG + chr3.2:66934179-66934198 MS.gene022489:CDS 40.0%
AACACGACCCAAAATGAGCA+TGG - chr3.2:66933019-66933038 None:intergenic 45.0%
ACACGACCCAAAATGAGCAT+GGG - chr3.2:66933018-66933037 None:intergenic 45.0%
ACCTAACCTCTTCCATTCTG+TGG + chr3.2:66933800-66933819 MS.gene022489:CDS 45.0%
CAACAAAACCGGCAGAGATA+AGG - chr3.2:66933890-66933909 None:intergenic 45.0%
CCAACCAGCATAGAACAAGA+AGG - chr3.2:66934359-66934378 None:intergenic 45.0%
CCAGATGCTGCCATCAATAT+TGG + chr3.2:66932525-66932544 MS.gene022489:CDS 45.0%
CCTAACCTCTTCCATTCTGT+GGG + chr3.2:66933801-66933820 MS.gene022489:CDS 45.0%
CCTTCTTGTTCTATGCTGGT+TGG + chr3.2:66934356-66934375 MS.gene022489:CDS 45.0%
CTCAGGTTCAATATCTACGG+AGG - chr3.2:66933622-66933641 None:intergenic 45.0%
CTGAAATTGCTCCCCCAAAA+TGG + chr3.2:66933358-66933377 MS.gene022489:CDS 45.0%
GACAAACATCATAATGCCCC+CGG - chr3.2:66933943-66933962 None:intergenic 45.0%
GATGCTGCCATCAATATTGG+TGG + chr3.2:66932528-66932547 MS.gene022489:CDS 45.0%
GTGTCTAACCTTATCTCTGC+CGG + chr3.2:66933879-66933898 MS.gene022489:CDS 45.0%
TGTTGATCCCGGTAAGTTGT+TGG - chr3.2:66933764-66933783 None:intergenic 45.0%
! CCAATATTGATGGCAGCATC+TGG - chr3.2:66932528-66932547 None:intergenic 45.0%
! GCTAACGGATCCAAGTACAA+TGG - chr3.2:66933856-66933875 None:intergenic 45.0%
! GGTCGTGTTTTTCTTGGGTT+TGG + chr3.2:66933030-66933049 MS.gene022489:CDS 45.0%
!! AAGAGAGTATCGACCTCACT+TGG + chr3.2:66933713-66933732 MS.gene022489:CDS 45.0%
!! GTTGGTGGTGCTATTAATGG+TGG + chr3.2:66932979-66932998 MS.gene022489:CDS 45.0%
!! GTTTTTCTTGGGTTTGGGGT+CGG + chr3.2:66933036-66933055 MS.gene022489:CDS 45.0%
!!! GCCGGTTTTGTTGATCGATT+TGG + chr3.2:66933897-66933916 MS.gene022489:CDS 45.0%
!!! TAAAAGCGCCTCGCCATTTT+GGG - chr3.2:66933374-66933393 None:intergenic 45.0%
!!! TTAAAAGCGCCTCGCCATTT+TGG - chr3.2:66933375-66933394 None:intergenic 45.0%
ACCACGTTCGACTAAGCTGT+TGG - chr3.2:66933556-66933575 None:intergenic 50.0%
ACGTTCGACTAAGCTGTTGG+GGG - chr3.2:66933553-66933572 None:intergenic 50.0%
AGACACCACTGCTAGCACAA+TGG - chr3.2:66934095-66934114 None:intergenic 50.0%
ATTGTGCTAGCAGTGGTGTC+TGG + chr3.2:66934094-66934113 MS.gene022489:CDS 50.0%
CACGTTCGACTAAGCTGTTG+GGG - chr3.2:66933554-66933573 None:intergenic 50.0%
CCACGTTCGACTAAGCTGTT+GGG - chr3.2:66933555-66933574 None:intergenic 50.0%
CCCACAGAATGGAAGAGGTT+AGG - chr3.2:66933804-66933823 None:intergenic 50.0%
CTCTTCCATTCTGTGGGCTT+GGG + chr3.2:66933807-66933826 MS.gene022489:CDS 50.0%
GAAAGCGACGATGTTGATCC+CGG - chr3.2:66933775-66933794 None:intergenic 50.0%
GCTGCAGGCTGCATAAACTA+CGG + chr3.2:66933432-66933451 MS.gene022489:CDS 50.0%
GGAGCCTTCTTGTTCTATGC+TGG + chr3.2:66934352-66934371 MS.gene022489:CDS 50.0%
GGTGACTTTGCTAGCTGCAA+GGG - chr3.2:66932908-66932927 None:intergenic 50.0%
GGTGCCCTCTTTATTGTTGG+TGG + chr3.2:66932964-66932983 MS.gene022489:CDS 50.0%
GGTGGTGCCCTCTTTATTGT+TGG + chr3.2:66932961-66932980 MS.gene022489:CDS 50.0%
GTTTCTTCGACCATACCACG+CGG - chr3.2:66932929-66932948 None:intergenic 50.0%
TGTGTCCATTGTGCTAGCAG+TGG + chr3.2:66934087-66934106 MS.gene022489:CDS 50.0%
! ACATGCATCGTTGCTGCTTC+CGG + chr3.2:66932576-66932595 MS.gene022489:CDS 50.0%
! GCTTCCGGTGGTCTTCTTTT+TGG + chr3.2:66932591-66932610 MS.gene022489:CDS 50.0%
! GTATCGACCTCACTTGGTGA+TGG + chr3.2:66933719-66933738 MS.gene022489:CDS 50.0%
!! TGGCGAGGCGCTTTTAATAC+CGG + chr3.2:66933378-66933397 MS.gene022489:CDS 50.0%
!!! AAAAGCGCCTCGCCATTTTG+GGG - chr3.2:66933373-66933392 None:intergenic 50.0%
!!! TGCTGGTTTTGGTTGGTCGT+GGG + chr3.2:66934186-66934205 MS.gene022489:CDS 50.0%
AGCAAAGTCACCGCGTGGTA+TGG + chr3.2:66932916-66932935 MS.gene022489:CDS 55.0%
ATTGCTCCCCCAAAATGGCG+AGG + chr3.2:66933363-66933382 MS.gene022489:CDS 55.0%
CATGTCCCAAGCCCACAGAA+TGG - chr3.2:66933815-66933834 None:intergenic 55.0%
CCAAGCCCACAGAATGGAAG+AGG - chr3.2:66933809-66933828 None:intergenic 55.0%
CCCAACAGCTTAGTCGAACG+TGG + chr3.2:66933552-66933571 MS.gene022489:CDS 55.0%
CCTCTTCCATTCTGTGGGCT+TGG + chr3.2:66933806-66933825 MS.gene022489:CDS 55.0%
CGGTGACTTTGCTAGCTGCA+AGG - chr3.2:66932909-66932928 None:intergenic 55.0%
GATACAATGGTGCGGCCTGT+TGG - chr3.2:66933335-66933354 None:intergenic 55.0%
GCGAATGCCATCACCAAGTG+AGG - chr3.2:66933729-66933748 None:intergenic 55.0%
TCTCCATCCCCATGTGTGCT+TGG - chr3.2:66933463-66933482 None:intergenic 55.0%
TCTGTGGGCTTGGGACATGA+TGG + chr3.2:66933816-66933835 MS.gene022489:CDS 55.0%
TGGGGATGGAGACTCTCTCT+TGG + chr3.2:66933471-66933490 MS.gene022489:CDS 55.0%
! GCAGTGGTGTCTGGTGTTGA+TGG + chr3.2:66934103-66934122 MS.gene022489:CDS 55.0%
!! AAAGCGCCTCGCCATTTTGG+GGG - chr3.2:66933372-66933391 None:intergenic 55.0%
!! TGTTGGGGGTGTCCGTTATG+AGG - chr3.2:66933539-66933558 None:intergenic 55.0%
!!! CTGCTGGTTTTGGTTGGTCG+TGG + chr3.2:66934185-66934204 MS.gene022489:CDS 55.0%
!!! GCTGGTTTTGGTTGGTCGTG+GGG + chr3.2:66934187-66934206 MS.gene022489:CDS 55.0%
CAGCTAGCAAAGTCACCGCG+TGG + chr3.2:66932911-66932930 MS.gene022489:CDS 60.0%
CCATCCCCATGTGTGCTTGG+CGG - chr3.2:66933460-66933479 None:intergenic 60.0%
! GGCTGGTGGGGTATTTGCTG+TGG + chr3.2:66932494-66932513 MS.gene022489:CDS 60.0%
! TGCATCGTTGCTGCTTCCGG+TGG + chr3.2:66932579-66932598 MS.gene022489:CDS 60.0%
!! GGAGTTGGTGTAGTCGCTGC+AGG + chr3.2:66933417-66933436 MS.gene022489:CDS 60.0%
!! GGGGGTGTCCGTTATGAGGA+AGG - chr3.2:66933535-66933554 None:intergenic 60.0%
ACGGCACCGCCAAGCACACA+TGG + chr3.2:66933451-66933470 MS.gene022489:CDS 65.0%
CCGCCAAGCACACATGGGGA+TGG + chr3.2:66933457-66933476 MS.gene022489:CDS 65.0%
CGGCACCGCCAAGCACACAT+GGG + chr3.2:66933452-66933471 MS.gene022489:CDS 65.0%
GGCACCGCCAAGCACACATG+GGG + chr3.2:66933453-66933472 MS.gene022489:CDS 65.0%
GGTCGTGGGGCCCTCTAACA+TGG + chr3.2:66934200-66934219 MS.gene022489:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 66932492 66934522 66932492 ID=MS.gene022489
chr3.2 mRNA 66932492 66934522 66932492 ID=MS.gene022489.t1;Parent=MS.gene022489
chr3.2 exon 66932492 66932633 66932492 ID=MS.gene022489.t1.exon1;Parent=MS.gene022489.t1
chr3.2 CDS 66932492 66932633 66932492 ID=cds.MS.gene022489.t1;Parent=MS.gene022489.t1
chr3.2 exon 66932752 66933071 66932752 ID=MS.gene022489.t1.exon2;Parent=MS.gene022489.t1
chr3.2 CDS 66932752 66933071 66932752 ID=cds.MS.gene022489.t1;Parent=MS.gene022489.t1
chr3.2 exon 66933339 66933968 66933339 ID=MS.gene022489.t1.exon3;Parent=MS.gene022489.t1
chr3.2 CDS 66933339 66933968 66933339 ID=cds.MS.gene022489.t1;Parent=MS.gene022489.t1
chr3.2 exon 66934082 66934522 66934082 ID=MS.gene022489.t1.exon4;Parent=MS.gene022489.t1
chr3.2 CDS 66934082 66934522 66934082 ID=cds.MS.gene022489.t1;Parent=MS.gene022489.t1
Gene Sequence

>MS.gene022489

ATGGCTGGTGGGGTATTTGCTGTGGATAGTACACCAGATGCTGCCATCAATATTGGTGGCAAGATAACACTCTCAATCATCATTACATGCATCGTTGCTGCTTCCGGTGGTCTTCTTTTTGGATATGACATTGGAATTTCAGGTTCACTTTGTTACAGATGAATTGTGTCACCTTATTATATTTGAATTACATTAGCAATCAAAATTATTGTCGAAATTTATTCTCATGATTTTGTTGTTGTGAAAATGTCGAATTTCAGGAGGTGTTACAACAATGGTGCCCTTTCTTCAAAAATTCTTTCCAGATATTTTAAGGAAGGCAGCTGGTGCTGAAGTGAATATGTATTGTGTGTATGATAGTCAAACATTGACATTATTTACGTCTTCTCTTTATCTAGCTGGATTAGTGTCATCCCTTGCAGCTAGCAAAGTCACCGCGTGGTATGGTCGAAGAAACGTCATCATAATAGGTGGTGCCCTCTTTATTGTTGGTGGTGCTATTAATGGTGGTTCGGAAAATATTCCCATGCTCATTTTGGGTCGTGTTTTTCTTGGGTTTGGGGTCGGTTTCACTAATCAAGTAAGTCGCAAAACACTTTTTTTTGGTAAATAATTAGTTCTTAATTTGGTAATATGCCTAAACAATCATTAATGTTGTATTGAACTTTAAAAACAATATGTAAATAAAAACAATTATTTTATGTAAAAAGGAATAGAGGAGTAGTATAGTATCCCCTCATGTTCGTTTTACCTCTACCTCACTATAATTGTCTTGAGTTTTTTACCTTTTTTTTTTTAAAGACTCCTTTTAAATTTTCAACTGCATTAATTATTATTTTACCAACAGGCCGCACCATTGTATCTATCTGAAATTGCTCCCCCAAAATGGCGAGGCGCTTTTAATACCGGCTTTCAATTCTTTTTGGGAGTTGGTGTAGTCGCTGCAGGCTGCATAAACTACGGCACCGCCAAGCACACATGGGGATGGAGACTCTCTCTTGGACTTGCAGTAGTGCCTGCAGTTGTAATGACAATTGGTTCCTTCCTCATAACGGACACCCCCAACAGCTTAGTCGAACGTGGTAAGATAGAGCAAGCTAAAAAAGCCTTACGCAAAATTAGAGGATCCTCCGTAGATATTGAACCTGAGTTAGAAGAACTTATTAAGTCAATAGAACTTGCAAAATCAGTGAAACAAGAGCCCTTTAAAACCATATTAAAAAGAGAGTATCGACCTCACTTGGTGATGGCATTCGCAATCCCATTTTTCCAACAACTTACCGGGATCAACATCGTCGCTTTCTATTCACCTAACCTCTTCCATTCTGTGGGCTTGGGACATGATGGCGCTTTAATTTCTGCCATTGTACTTGGATCCGTTAGCCTTGTGTCTAACCTTATCTCTGCCGGTTTTGTTGATCGATTTGGTCGAAGAATCTTGTTCATAACCGGGGGCATTATGATGTTTGTCTGCTTGGTAAGTGAATTAACAACCTAACTATCTATTTATTAAATTTATTTTCAGTCATTACAAACTATAATGTTCATGTGTCACCTACTAATTAAATTTTTTGTGTGAACAATGTGAAGATTGCTGTGTCCATTGTGCTAGCAGTGGTGTCTGGTGTTGATGGTACAAATGACATATCCAAGGGGAATGCAATATTAGTATTGGTGCTATTATGTTTATACTCTGCTGGTTTTGGTTGGTCGTGGGGCCCTCTAACATGGCTTATTCCAAGTGAGATTTTCCCTGTAAATATAAGAACCACAGGACAAAGCATAGCTATTGCTATACAGTTCATAATAGTATTTGTGCTATCACAAACATTCTTGACAATGTTATGTCACTTTAAGTTTGGAGCCTTCTTGTTCTATGCTGGTTGGGTTGTTGTGATGACTCTTTTTATTATATTTTTCTTGCCTGAGACTAAAGGAATTCCCTTGGATTCAATGTACACCATATGGGGAAAACATTGGTTTTGGTGTCGATTTGTTAAAGGAGAAGATGGTCAAGAAAATCATCCATGA
Protein sequence

>MS.gene022489.t1

MAGGVFAVDSTPDAAINIGGKITLSIIITCIVAASGGLLFGYDIGISGGVTTMVPFLQKFFPDILRKAAGAEVNMYCVYDSQTLTLFTSSLYLAGLVSSLAASKVTAWYGRRNVIIIGGALFIVGGAINGGSENIPMLILGRVFLGFGVGFTNQAAPLYLSEIAPPKWRGAFNTGFQFFLGVGVVAAGCINYGTAKHTWGWRLSLGLAVVPAVVMTIGSFLITDTPNSLVERGKIEQAKKALRKIRGSSVDIEPELEELIKSIELAKSVKQEPFKTILKREYRPHLVMAFAIPFFQQLTGINIVAFYSPNLFHSVGLGHDGALISAIVLGSVSLVSNLISAGFVDRFGRRILFITGGIMMFVCLIAVSIVLAVVSGVDGTNDISKGNAILVLVLLCLYSAGFGWSWGPLTWLIPSEIFPVNIRTTGQSIAIAIQFIIVFVLSQTFLTMLCHFKFGAFLFYAGWVVVMTLFIIFFLPETKGIPLDSMYTIWGKHWFWCRFVKGEDGQENHP