AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene56212

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56212.t1 MTR_3g008170 97.843 510 11 0 1 510 1 510 0.0 1015
MS.gene56212.t1 MTR_3g008160 75.449 501 120 3 1 500 1 499 0.0 780
MS.gene56212.t1 MTR_3g008160 77.162 451 102 1 50 500 1 450 0.0 727
MS.gene56212.t1 MTR_0204s0020 56.173 486 209 4 13 498 11 492 0.0 572
MS.gene56212.t1 MTR_0204s0020 55.761 486 208 5 13 498 11 489 0.0 563
MS.gene56212.t1 MTR_5g006070 54.747 495 216 6 16 507 15 504 0.0 563
MS.gene56212.t1 MTR_5g082540 56.496 508 214 5 1 505 1 504 0.0 562
MS.gene56212.t1 MTR_5g094760 55.694 483 210 4 16 498 20 498 0.0 552
MS.gene56212.t1 MTR_7g091690 55.487 483 211 4 16 498 20 498 0.0 547
MS.gene56212.t1 MTR_1g038630 56.088 501 213 5 1 498 1 497 0.0 545
MS.gene56212.t1 MTR_0204s0040 52.834 494 226 5 13 506 19 505 0.0 545
MS.gene56212.t1 MTR_4g116770 52.834 494 226 5 13 506 215 701 0.0 545
MS.gene56212.t1 MTR_4g116790 52.716 497 230 5 13 509 17 508 0.0 545
MS.gene56212.t1 MTR_3g074410 53.719 484 217 5 18 498 20 499 0.0 533
MS.gene56212.t1 MTR_1g104750 53.614 498 227 4 1 496 1 496 0.0 532
MS.gene56212.t1 MTR_1g104770 53.908 499 225 5 1 496 1 497 0.0 529
MS.gene56212.t1 MTR_3g074390 53.402 485 219 5 17 498 22 502 0.0 528
MS.gene56212.t1 MTR_3g093010 55.511 499 215 5 11 505 10 505 0.0 527
MS.gene56212.t1 MTR_4g091370 56.907 485 204 3 17 498 17 499 0.0 526
MS.gene56212.t1 MTR_1g104780 54.433 485 211 7 29 509 28 506 0.0 525
MS.gene56212.t1 MTR_5g041550 55.578 502 217 4 1 498 1 500 0.0 525
MS.gene56212.t1 MTR_0009s0370 51.267 513 241 6 1 509 1 508 0.0 519
MS.gene56212.t1 MTR_5g006070 54.447 461 202 6 50 507 1 456 0.0 517
MS.gene56212.t1 MTR_1g038600 54.000 500 207 6 1 498 1 479 1.05e-177 509
MS.gene56212.t1 MTR_3g074270 48.889 495 230 5 4 498 5 476 5.53e-172 494
MS.gene56212.t1 MTR_6g087040 50.622 482 234 4 18 498 21 499 1.30e-171 494
MS.gene56212.t1 MTR_6g088375 50.622 482 234 4 18 498 21 499 1.30e-171 494
MS.gene56212.t1 MTR_8g102860 49.898 489 241 4 18 505 21 506 3.12e-170 491
MS.gene56212.t1 MTR_3g023480 50.803 498 238 5 17 509 15 510 7.90e-170 489
MS.gene56212.t1 MTR_4g090600 55.000 500 219 4 2 498 3 499 1.18e-168 486
MS.gene56212.t1 MTR_3g007910 52.130 493 196 7 11 498 10 467 5.07e-168 483
MS.gene56212.t1 MTR_3g093060 53.540 452 203 4 50 496 1 450 5.76e-160 462
MS.gene56212.t1 MTR_8g102860 49.891 457 225 4 50 505 1 454 7.68e-156 452
MS.gene56212.t1 MTR_3g074380 52.958 355 160 5 17 370 20 368 2.66e-124 368
MS.gene56212.t1 MTR_4g116790 50.000 352 172 4 13 364 17 364 6.71e-124 367
MS.gene56212.t1 MTR_3g074320 50.774 323 152 5 188 506 20 339 1.62e-112 337
MS.gene56212.t1 MTR_3g074340 50.464 323 153 5 188 506 20 339 6.78e-112 335
MS.gene56212.t1 MTR_3g074370 51.274 314 147 4 188 498 20 330 3.23e-111 333
MS.gene56212.t1 MTR_3g074400 40.879 455 212 9 50 482 1 420 7.11e-105 320
MS.gene56212.t1 MTR_6g088450 30.043 466 293 11 22 477 57 499 5.08e-56 195
MS.gene56212.t1 MTR_8g103500 28.980 490 314 10 12 490 7 473 1.76e-55 194
MS.gene56212.t1 MTR_3g116240 29.938 481 291 13 27 485 32 488 1.43e-54 191
MS.gene56212.t1 MTR_4g069500 26.901 513 334 9 13 507 21 510 1.24e-52 186
MS.gene56212.t1 MTR_8g077890 29.666 509 313 10 11 500 7 489 1.35e-52 186
MS.gene56212.t1 MTR_4g072030 28.689 488 305 14 27 496 31 493 9.52e-50 179
MS.gene56212.t1 MTR_3g084110 27.812 489 320 11 22 505 27 487 6.28e-49 176
MS.gene56212.t1 MTR_4g069500 27.315 432 294 5 94 507 31 460 1.16e-48 174
MS.gene56212.t1 MTR_1g116660 26.789 489 330 11 22 505 34 499 2.63e-47 172
MS.gene56212.t1 MTR_5g075300 27.530 494 316 10 18 491 14 485 5.53e-47 171
MS.gene56212.t1 MTR_2g013310 27.673 477 311 11 22 490 52 502 6.71e-47 171
MS.gene56212.t1 MTR_5g096000 52.632 171 62 2 11 181 10 161 6.37e-46 163
MS.gene56212.t1 MTR_5g096000 59.836 122 49 0 377 498 177 298 4.92e-39 144
MS.gene56212.t1 MTR_7g446340 25.562 489 329 11 11 491 45 506 7.21e-46 168
MS.gene56212.t1 MTR_6g007340 25.562 489 329 11 11 491 45 506 7.21e-46 168
MS.gene56212.t1 MTR_2g013310 30.357 392 257 9 108 490 45 429 2.28e-45 165
MS.gene56212.t1 MTR_7g005910 26.722 479 314 11 22 491 32 482 6.77e-45 165
MS.gene56212.t1 MTR_3g074330 53.846 156 63 3 4 152 5 158 9.04e-44 153
MS.gene56212.t1 MTR_3g074360 53.846 156 63 3 4 152 5 158 9.04e-44 153
MS.gene56212.t1 MTR_1g116650 26.556 482 309 11 22 496 77 520 1.53e-43 162
MS.gene56212.t1 MTR_3g074310 53.846 156 63 3 4 152 5 158 2.03e-43 152
MS.gene56212.t1 MTR_5g077580 26.186 569 295 15 22 496 25 562 2.26e-42 159
MS.gene56212.t1 MTR_4g077740 26.737 475 312 10 24 485 46 497 5.28e-42 157
MS.gene56212.t1 MTR_5g019870 29.257 417 264 8 100 491 72 482 1.13e-39 150
MS.gene56212.t1 MTR_8g077310 26.947 475 306 11 18 485 42 482 4.53e-38 145
MS.gene56212.t1 MTR_1g022315 27.273 473 299 15 24 486 49 486 6.18e-38 145
MS.gene56212.t1 MTR_1g022315 27.990 393 259 9 103 486 10 387 7.00e-38 143
MS.gene56212.t1 MTR_6g018790 26.931 479 310 14 12 486 98 540 8.54e-37 143
MS.gene56212.t1 MTR_7g082270 26.205 477 318 12 11 486 57 500 1.76e-36 142
MS.gene56212.t1 MTR_8g077310 28.571 385 254 7 108 485 15 385 2.32e-36 139
MS.gene56212.t1 MTR_2g049020 31.287 342 203 10 22 354 25 343 3.85e-36 142
MS.gene56212.t1 MTR_8g077300 25.996 477 310 10 17 485 33 474 4.53e-36 140
MS.gene56212.t1 MTR_2g048720 31.672 341 202 8 22 355 25 341 1.30e-35 140
MS.gene56212.t1 MTR_4g118610 25.786 477 318 11 11 485 41 483 6.90e-35 137
MS.gene56212.t1 MTR_2g020710 27.654 358 236 9 134 485 51 391 3.45e-34 133
MS.gene56212.t1 MTR_2g020710 27.654 358 236 9 134 485 140 480 9.08e-34 134
MS.gene56212.t1 MTR_5g020270 25.732 478 298 13 23 485 50 485 4.64e-33 132
MS.gene56212.t1 MTR_5g020270 27.226 393 249 9 108 485 15 385 1.35e-32 129
MS.gene56212.t1 MTR_4g069500 26.625 323 213 7 205 507 3 321 3.56e-32 126
MS.gene56212.t1 MTR_4g013205 25.189 397 276 10 94 485 89 469 3.69e-32 129
MS.gene56212.t1 MTR_7g113970 26.050 357 250 6 130 485 149 492 1.15e-31 128
MS.gene56212.t1 MTR_7g113960 26.554 354 242 7 134 485 118 455 1.64e-31 127
MS.gene56212.t1 MTR_2g026160 28.612 353 219 8 22 363 26 356 2.92e-31 127
MS.gene56212.t1 MTR_0064s0040 46.479 142 62 3 12 152 13 141 4.53e-31 118
MS.gene56212.t1 MTR_7g094450 25.653 421 299 7 67 486 64 471 6.06e-31 125
MS.gene56212.t1 MTR_7g082270 26.730 419 274 10 11 429 57 442 1.00e-30 125
MS.gene56212.t1 MTR_3g080240 23.377 462 321 11 28 486 98 529 3.43e-29 121
MS.gene56212.t1 MTR_1g114280 37.952 166 82 3 339 502 11 157 3.12e-28 110
MS.gene56212.t1 MTR_1g038620 37.222 180 86 3 191 362 29 189 7.23e-28 110
MS.gene56212.t1 MTR_6g087910 24.422 389 281 7 98 485 107 483 8.72e-28 116
MS.gene56212.t1 MTR_5g020270 24.947 469 292 13 23 485 50 464 2.52e-27 115
MS.gene56212.t1 MTR_7g094110 27.273 352 240 8 136 485 135 472 3.34e-27 114
MS.gene56212.t1 MTR_2g026140 28.406 345 204 11 29 363 30 341 7.49e-27 114
MS.gene56212.t1 MTR_8g077310 27.066 351 225 8 18 367 42 362 9.65e-26 109
MS.gene56212.t1 MTR_4g064820 28.101 395 249 11 23 402 96 470 4.00e-25 108
MS.gene56212.t1 MTR_4g118610 25.971 412 259 14 11 415 41 413 1.68e-22 100
MS.gene56212.t1 MTR_2g020710 26.736 288 188 9 134 415 140 410 6.84e-21 95.5
MS.gene56212.t1 MTR_2g020710 26.829 287 187 9 134 414 140 409 9.83e-21 94.7
MS.gene56212.t1 MTR_5g024740 28.455 246 153 6 21 264 2 226 4.65e-19 91.3
MS.gene56212.t1 MTR_7g094110 25.284 352 227 9 136 485 135 452 1.07e-18 89.0
MS.gene56212.t1 MTR_7g113960 27.602 221 148 4 136 355 120 329 2.79e-18 87.0
MS.gene56212.t1 MTR_2g020710 27.572 243 154 8 134 370 140 366 5.30e-18 86.3
MS.gene56212.t1 MTR_7g113970 27.391 230 155 4 130 358 149 367 1.91e-17 85.1
MS.gene56212.t1 MTR_3g118530 29.947 187 128 3 91 276 54 238 2.22e-17 85.9
MS.gene56212.t1 MTR_3g118530 29.947 187 128 3 91 276 54 238 1.02e-16 83.6
MS.gene56212.t1 MTR_8g073100 31.214 173 116 3 90 261 53 223 1.71e-16 83.2
MS.gene56212.t1 MTR_8g073100 29.464 224 140 4 271 482 482 699 2.29e-13 73.2
MS.gene56212.t1 MTR_3g116060 31.579 171 114 3 107 276 68 236 7.34e-16 81.3
MS.gene56212.t1 MTR_3g116060 27.778 234 142 7 266 482 488 711 1.16e-11 67.8
MS.gene56212.t1 MTR_5g044910 28.324 173 121 3 90 261 53 223 2.77e-15 79.3
MS.gene56212.t1 MTR_1g093115 55.556 63 27 1 161 222 1 63 3.07e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56212.t1 AT5G61520 64.024 492 167 4 15 500 16 503 0.0 633
MS.gene56212.t1 AT5G61520 63.537 458 157 4 49 500 2 455 0.0 583
MS.gene56212.t1 AT4G02050 56.823 491 208 4 13 503 17 503 0.0 578
MS.gene56212.t1 AT4G02050 56.823 491 208 4 13 503 17 503 0.0 578
MS.gene56212.t1 AT5G26340 56.187 493 211 5 16 505 16 506 0.0 565
MS.gene56212.t1 AT3G19930 56.189 509 215 5 1 507 1 503 0.0 554
MS.gene56212.t1 AT3G19930 56.189 509 215 5 1 507 1 503 0.0 554
MS.gene56212.t1 AT1G11260 55.888 501 216 3 1 498 1 499 0.0 551
MS.gene56212.t1 AT3G19940 53.722 497 219 5 19 507 21 514 0.0 546
MS.gene56212.t1 AT1G50310 54.016 498 219 4 19 508 21 516 0.0 544
MS.gene56212.t1 AT4G21480 56.939 490 204 4 12 498 12 497 0.0 538
MS.gene56212.t1 AT5G23270 55.579 484 210 4 16 496 17 498 0.0 533
MS.gene56212.t1 AT1G34580 52.277 505 231 6 4 502 5 505 0.0 533
MS.gene56212.t1 AT1G77210 49.281 487 243 4 18 503 21 504 2.42e-172 496
MS.gene56212.t1 AT1G77210 49.281 487 243 4 18 503 21 504 2.42e-172 496
MS.gene56212.t1 AT1G34580 52.070 459 210 6 50 502 1 455 5.61e-169 485
MS.gene56212.t1 AT5G26250 47.273 495 256 5 16 509 15 505 4.21e-159 462
MS.gene56212.t1 AT1G07340 50.301 499 240 6 1 496 1 494 1.75e-154 450
MS.gene56212.t1 AT3G05960 45.859 495 263 5 16 509 14 504 1.29e-152 445
MS.gene56212.t1 AT1G50310 52.329 365 164 4 152 508 11 373 7.72e-133 390
MS.gene56212.t1 AT1G77210 49.008 353 176 4 152 503 6 355 1.30e-117 350
MS.gene56212.t1 AT2G16120 29.231 520 330 7 7 508 10 509 1.99e-59 204
MS.gene56212.t1 AT2G16130 29.134 508 322 7 7 496 10 497 6.95e-57 197
MS.gene56212.t1 AT3G18830 29.032 496 306 10 13 489 31 499 2.95e-55 194
MS.gene56212.t1 AT4G36670 30.061 489 296 13 25 491 18 482 6.39e-53 187
MS.gene56212.t1 AT2G18480 30.233 473 284 13 37 488 36 483 2.98e-51 182
MS.gene56212.t1 AT2G43330 26.471 476 321 9 22 491 30 482 1.00e-45 167
MS.gene56212.t1 AT3G05165 26.316 475 316 8 12 485 19 460 1.29e-43 160
MS.gene56212.t1 AT3G05165 26.316 475 316 8 12 485 19 460 1.29e-43 160
MS.gene56212.t1 AT3G05165 26.316 475 316 8 12 485 19 460 1.29e-43 160
MS.gene56212.t1 AT1G08900 26.847 406 275 7 85 485 25 413 6.31e-42 155
MS.gene56212.t1 AT1G08900 26.847 406 275 7 85 485 59 447 9.31e-42 155
MS.gene56212.t1 AT1G08900 26.847 406 275 7 85 485 67 455 1.27e-41 155
MS.gene56212.t1 AT1G08900 26.847 406 275 7 85 485 67 455 1.27e-41 155
MS.gene56212.t1 AT2G20780 25.673 483 327 11 13 489 45 501 1.00e-40 154
MS.gene56212.t1 AT1G75220 27.542 472 304 12 24 489 48 487 1.54e-39 150
MS.gene56212.t1 AT5G17010 27.216 485 297 11 24 485 48 499 6.16e-39 149
MS.gene56212.t1 AT5G17010 27.216 485 297 11 24 485 48 499 6.16e-39 149
MS.gene56212.t1 AT5G17010 27.216 485 297 11 24 485 48 499 6.16e-39 149
MS.gene56212.t1 AT5G59250 28.690 481 302 12 23 486 98 554 9.93e-39 149
MS.gene56212.t1 AT3G05160 25.840 476 319 8 11 485 9 451 1.11e-38 147
MS.gene56212.t1 AT1G08930 25.755 497 317 12 4 487 33 490 1.39e-38 147
MS.gene56212.t1 AT1G08930 25.755 497 317 12 4 487 33 490 1.39e-38 147
MS.gene56212.t1 AT3G05165 26.339 448 296 8 12 458 19 433 2.39e-38 147
MS.gene56212.t1 AT5G16150 26.915 483 315 13 6 485 92 539 2.56e-38 147
MS.gene56212.t1 AT5G16150 26.915 483 315 13 6 485 92 539 2.56e-38 147
MS.gene56212.t1 AT5G16150 26.915 483 315 13 6 485 92 539 2.56e-38 147
MS.gene56212.t1 AT5G27360 25.105 478 318 7 12 485 24 465 4.01e-38 145
MS.gene56212.t1 AT3G03090 27.655 499 301 13 14 485 34 499 5.36e-38 146
MS.gene56212.t1 AT5G27350 27.386 482 305 13 12 485 17 461 5.62e-38 145
MS.gene56212.t1 AT3G05160 27.228 404 280 6 83 485 12 402 7.52e-38 144
MS.gene56212.t1 AT3G05160 27.228 404 280 6 83 485 12 402 7.52e-38 144
MS.gene56212.t1 AT1G19450 27.637 474 301 12 24 489 49 488 8.42e-38 145
MS.gene56212.t1 AT5G27360 24.477 478 321 6 12 485 72 513 1.57e-37 145
MS.gene56212.t1 AT3G05165 26.478 423 277 8 12 433 19 408 3.10e-37 143
MS.gene56212.t1 AT3G05165 26.478 423 277 8 12 433 19 408 3.10e-37 143
MS.gene56212.t1 AT1G08890 24.375 480 321 10 12 486 16 458 4.15e-37 142
MS.gene56212.t1 AT2G20780 27.320 388 270 8 108 489 62 443 9.15e-37 142
MS.gene56212.t1 AT3G05400 24.790 476 324 12 11 485 14 456 6.46e-36 139
MS.gene56212.t1 AT5G27360 26.667 360 244 4 130 485 18 361 1.68e-35 136
MS.gene56212.t1 AT5G27360 26.667 360 244 4 130 485 18 361 1.68e-35 136
MS.gene56212.t1 AT1G30220 29.609 358 220 9 22 370 27 361 9.80e-35 137
MS.gene56212.t1 AT1G30220 33.607 122 76 2 380 496 447 568 2.34e-11 66.6
MS.gene56212.t1 AT3G05400 28.032 371 252 9 117 485 79 436 1.26e-34 135
MS.gene56212.t1 AT1G54730 25.328 458 308 7 29 485 38 462 6.33e-34 134
MS.gene56212.t1 AT4G04750 27.869 366 246 9 130 491 123 474 1.30e-33 133
MS.gene56212.t1 AT4G04750 27.869 366 246 9 130 491 123 474 1.30e-33 133
MS.gene56212.t1 AT4G04750 27.869 366 246 9 130 491 167 518 1.31e-33 134
MS.gene56212.t1 AT5G18840 24.738 477 324 10 11 485 32 475 3.86e-33 132
MS.gene56212.t1 AT1G08900 25.936 374 255 7 85 453 67 423 4.10e-33 131
MS.gene56212.t1 AT2G48020 26.462 359 250 6 130 487 115 460 1.61e-32 130
MS.gene56212.t1 AT2G48020 26.462 359 250 6 130 487 115 460 1.61e-32 130
MS.gene56212.t1 AT3G05150 25.549 364 247 7 139 491 131 481 1.09e-31 127
MS.gene56212.t1 AT4G04760 25.783 415 283 8 85 491 14 411 1.33e-31 126
MS.gene56212.t1 AT3G05155 25.679 405 281 9 85 486 69 456 1.78e-31 127
MS.gene56212.t1 AT3G05150 26.074 349 243 6 139 485 131 466 1.96e-31 127
MS.gene56212.t1 AT3G05150 26.074 349 243 6 139 485 131 466 1.96e-31 127
MS.gene56212.t1 AT4G04760 25.783 415 283 8 85 491 73 470 2.59e-31 126
MS.gene56212.t1 AT4G16480 30.548 347 208 9 20 355 24 348 5.18e-31 127
MS.gene56212.t1 AT4G16480 30.548 347 208 9 20 355 24 348 5.18e-31 127
MS.gene56212.t1 AT4G16480 30.548 347 208 9 20 355 24 348 5.18e-31 127
MS.gene56212.t1 AT2G35740 30.641 359 210 13 22 367 25 357 4.51e-30 124
MS.gene56212.t1 AT1G54730 25.175 429 287 7 29 456 38 433 4.98e-29 119
MS.gene56212.t1 AT1G54730 24.236 458 292 7 29 485 38 441 9.92e-29 119
MS.gene56212.t1 AT1G05030 24.130 460 316 11 29 485 85 514 1.06e-28 119
MS.gene56212.t1 AT1G05030 24.694 409 296 8 79 485 64 462 1.97e-28 118
MS.gene56212.t1 AT1G79820 23.707 464 313 14 28 485 59 487 2.54e-27 115
MS.gene56212.t1 AT1G79820 23.707 464 313 14 28 485 59 487 2.54e-27 115
MS.gene56212.t1 AT1G08920 24.000 500 325 14 1 485 10 469 1.31e-26 113
MS.gene56212.t1 AT4G04760 24.524 420 277 9 85 490 73 466 7.47e-26 110
MS.gene56212.t1 AT1G08920 24.089 494 325 14 1 485 10 462 7.79e-26 110
MS.gene56212.t1 AT3G20460 24.631 406 284 7 85 485 95 483 1.58e-25 110
MS.gene56212.t1 AT5G27360 23.671 414 276 7 12 421 24 401 4.80e-25 107
MS.gene56212.t1 AT1G67300 24.304 395 284 8 94 485 104 486 6.73e-25 108
MS.gene56212.t1 AT1G67300 24.304 395 284 8 94 485 104 486 6.73e-25 108
MS.gene56212.t1 AT1G67300 24.433 397 282 9 94 485 104 487 1.24e-24 107
MS.gene56212.t1 AT1G54730 24.009 429 271 7 29 456 38 412 7.09e-24 104
MS.gene56212.t1 AT1G67300 24.931 361 254 9 94 452 104 449 5.03e-23 102
MS.gene56212.t1 AT1G67300 24.931 361 254 9 94 452 104 449 5.03e-23 102
MS.gene56212.t1 AT1G67300 24.773 331 235 7 94 422 104 422 1.35e-22 100
MS.gene56212.t1 AT1G67300 24.773 331 235 7 94 422 104 422 1.35e-22 100
MS.gene56212.t1 AT1G54730 24.485 388 259 7 29 415 38 392 1.23e-21 97.4
MS.gene56212.t1 AT1G54730 24.485 388 259 7 29 415 38 392 1.23e-21 97.4
MS.gene56212.t1 AT1G08920 23.542 463 304 14 1 454 10 431 1.16e-20 95.1
MS.gene56212.t1 AT1G79820 22.983 409 275 13 28 431 59 432 1.17e-20 95.1
MS.gene56212.t1 AT5G17010 23.347 484 257 13 24 485 45 436 1.19e-19 92.0
MS.gene56212.t1 AT3G05155 25.641 273 186 6 85 355 69 326 3.61e-19 89.0
MS.gene56212.t1 AT3G51490 28.235 255 162 7 23 276 4 238 1.42e-18 89.7
MS.gene56212.t1 AT3G51490 27.885 208 134 5 286 482 512 714 2.52e-11 66.6
MS.gene56212.t1 AT3G51490 28.235 255 162 7 23 276 4 238 1.56e-18 89.4
MS.gene56212.t1 AT1G54730 25.305 328 213 6 29 355 38 334 4.70e-18 85.9
MS.gene56212.t1 AT1G79820 21.429 462 278 12 28 485 59 439 7.80e-18 86.3
MS.gene56212.t1 AT2G48020 26.800 250 169 6 130 378 115 351 1.99e-17 84.7
MS.gene56212.t1 AT1G54730 23.196 388 243 7 29 415 38 371 8.47e-17 82.8
MS.gene56212.t1 AT3G51490 31.053 190 127 4 88 276 2 188 1.18e-16 83.6
MS.gene56212.t1 AT3G51490 27.885 208 134 5 286 482 462 664 2.88e-11 66.6
MS.gene56212.t1 AT2G48020 27.155 232 157 4 130 360 115 335 1.27e-16 82.0
MS.gene56212.t1 AT1G54730 24.013 304 202 5 29 331 38 313 5.55e-15 76.6
MS.gene56212.t1 AT1G54730 24.013 304 202 5 29 331 38 313 5.55e-15 76.6
MS.gene56212.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.15e-14 76.6
MS.gene56212.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.15e-14 76.6
MS.gene56212.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.15e-14 76.6
MS.gene56212.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.33e-14 76.3
MS.gene56212.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.33e-14 76.3
MS.gene56212.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.33e-14 76.3
MS.gene56212.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.33e-14 76.3
MS.gene56212.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.33e-14 76.3
MS.gene56212.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.33e-14 76.3
MS.gene56212.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.33e-14 76.3
MS.gene56212.t1 AT1G20840 29.545 176 121 3 107 281 68 241 3.01e-14 75.9
MS.gene56212.t1 AT1G20840 29.545 176 121 3 107 281 68 241 3.01e-14 75.9

Find 120 sgRNAs with CRISPR-Local

Find 177 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAGGCTATTGGGAGTTTC+TGG 0.178636 3.3:-4010150 None:intergenic
CGCCTATACCAATGCTTAAT+TGG 0.213213 3.3:-4010005 None:intergenic
ACATCCTCTCTTTATGTTGC+TGG 0.228502 3.3:+4009188 MS.gene56212:CDS
AAGTAAAGGGTATGCTTATA+TGG 0.276197 3.3:+4010626 MS.gene56212:CDS
GGTCTTGGGTGGTTTGGATT+AGG 0.278010 3.3:-4010167 None:intergenic
GGTGGTTTGGATTAGGCTAT+TGG 0.284538 3.3:-4010160 None:intergenic
GGCTATGACATTGGTATAAC+AGG 0.292811 3.3:+4009044 MS.gene56212:CDS
TGTATTTATGTTGCTGGGTT+TGG 0.292843 3.3:+4010663 MS.gene56212:CDS
TCTTATGTCACCAGAGTCTT+TGG 0.299718 3.3:+4009233 MS.gene56212:CDS
ATGCTTTGCCACTTCAAGTC+TGG 0.305113 3.3:+4010819 MS.gene56212:CDS
GCTATGGGAGGTGTCATATT+TGG 0.306801 3.3:+4009023 MS.gene56212:CDS
TTTCTTCTTCTTTGGAGGTT+GGG 0.312209 3.3:+4010845 MS.gene56212:CDS
GTGGTTTGGATTAGGCTATT+GGG 0.325826 3.3:-4010159 None:intergenic
TGCTTTGCCACTTCAAGTCT+GGG 0.327809 3.3:+4010820 MS.gene56212:CDS
TTTGATGGTCTTGGGTGGTT+TGG 0.332601 3.3:-4010173 None:intergenic
TTTATTGCCCCTCTAAATCT+AGG 0.334602 3.3:-4009973 None:intergenic
GGTGGTGCTGCGTTCCTTGC+CGG 0.346188 3.3:+4009278 MS.gene56212:CDS
TGTGGCAGGAACATTGGTTT+TGG 0.348332 3.3:+4010943 MS.gene56212:CDS
TTCCTTGCCGGCACAGCCCT+TGG 0.352739 3.3:+4009290 MS.gene56212:CDS
TCTGCTAATCTAATCAACTA+TGG 0.363227 3.3:+4010033 MS.gene56212:CDS
CTCTTGTATGATGGCTGCTA+TGG 0.366245 3.3:+4009007 MS.gene56212:CDS
TATCATCTGATTTCATCTTA+AGG 0.371294 3.3:-4009118 None:intergenic
ATGATATGTATTTATGTTGC+TGG 0.372683 3.3:+4010657 MS.gene56212:CDS
TGCTGGGTTTGGATGGTCGT+GGG 0.379669 3.3:+4010674 MS.gene56212:CDS
TGTTGTTCTCTCTTGTATGA+TGG 0.382595 3.3:+4008998 MS.gene56212:CDS
TACAAGAGAGAACAACATAA+AGG 0.385049 3.3:-4008992 None:intergenic
GTTAATAATGGCAGTTGGAT+TGG 0.392274 3.3:+4008926 None:intergenic
TGGAAGAATTTATTCAGAAA+TGG 0.395141 3.3:-4009086 None:intergenic
ATGGCATTACCTAGATTTAG+AGG 0.398789 3.3:+4009964 MS.gene56212:CDS
CGCAAGCCGTCTATCGTTGC+AGG 0.403978 3.3:+4009257 MS.gene56212:CDS
GGAAAAGTGCACCTAGTGTT+AGG 0.409661 3.3:-4010125 None:intergenic
CATTGATCCCTGTCACTTGT+TGG 0.410113 3.3:-4010368 None:intergenic
AGAAAAGATCAAAGGCGGTT+GGG 0.419684 3.3:+4010059 MS.gene56212:CDS
CTTCTTTGGAGGTTGGGTGG+TGG 0.428296 3.3:+4010851 MS.gene56212:CDS
CAATTGTTCTGAAAAGTAAA+GGG 0.433614 3.3:-4010407 None:intergenic
TCCTCTATATCTCTCAGAAA+TGG 0.439787 3.3:+4009945 MS.gene56212:CDS
ATCATGGTGGATTAAGTAAA+GGG 0.444020 3.3:+4010613 MS.gene56212:CDS
CCAATTGTTCTGAAAAGTAA+AGG 0.448097 3.3:-4010408 None:intergenic
ATGTATAGTTGGAGGCATAA+TGG 0.458157 3.3:+4010575 MS.gene56212:CDS
GCCATTTCTGAGAGATATAG+AGG 0.460441 3.3:-4009946 None:intergenic
CCATTGGAGATTAGATCAGC+TGG 0.461723 3.3:+4010732 MS.gene56212:CDS
CTTGCCGGCACAGCCCTTGG+AGG 0.464507 3.3:+4009293 MS.gene56212:CDS
CTGGAACTGCTGCCATGGCT+AGG 0.466467 3.3:-4010095 None:intergenic
GTCATATTTGGCTATGACAT+TGG 0.468383 3.3:+4009035 MS.gene56212:CDS
ACAAGAGAGAACAACATAAA+GGG 0.470220 3.3:-4008991 None:intergenic
TTCCAATTAAGCATTGGTAT+AGG 0.471058 3.3:+4010003 MS.gene56212:CDS
CTTCTTCTTTGGAGGTTGGG+TGG 0.473447 3.3:+4010848 MS.gene56212:CDS
GATCATGGTGGATTAAGTAA+AGG 0.480657 3.3:+4010612 MS.gene56212:CDS
TGCACCTCCAAGGGCTGTGC+CGG 0.482405 3.3:-4009297 None:intergenic
TTGCTGGGTTTGGATGGTCG+TGG 0.495127 3.3:+4010673 MS.gene56212:CDS
TTTGTGTCACAATGTATAGT+TGG 0.495795 3.3:+4010564 MS.gene56212:CDS
GGATGGTCGTGGGGTCCACT+AGG 0.496301 3.3:+4010684 MS.gene56212:CDS
CTCCAAGGGCTGTGCCGGCA+AGG 0.498578 3.3:-4009292 None:intergenic
GCTATTGCCATTACAAGTTG+TGG 0.498771 3.3:-4010333 None:intergenic
CATTGATATGAATGTCGAAC+CGG 0.500730 3.3:-4010484 None:intergenic
TCTTGTATGATGGCTGCTAT+GGG 0.505887 3.3:+4009008 MS.gene56212:CDS
GAAAAGATCAAAGGCGGTTG+GGG 0.516727 3.3:+4010060 MS.gene56212:CDS
AAGTGACGACAGAGTTAAAG+AGG 0.517197 3.3:+4010986 MS.gene56212:CDS
GGTCGTGGGGTCCACTAGGT+TGG 0.523423 3.3:+4010688 MS.gene56212:CDS
CAGAAAAGATCAAAGGCGGT+TGG 0.527734 3.3:+4010058 MS.gene56212:CDS
CGTTAAAAGCTGCACCTCCA+AGG 0.527801 3.3:-4009307 None:intergenic
AGACCATCAAAAGGCGAAGC+GGG 0.529020 3.3:+4010185 MS.gene56212:CDS
AGATCAAAGGCGGTTGGGGT+TGG 0.529423 3.3:+4010064 MS.gene56212:CDS
AATGGCTTCCAATTAAGCAT+TGG 0.529992 3.3:+4009997 MS.gene56212:CDS
TGATATGTATTTATGTTGCT+GGG 0.530313 3.3:+4010658 MS.gene56212:CDS
AAATGTGCCACTTGAACAGA+TGG 0.537240 3.3:+4010914 MS.gene56212:CDS
ACTTTCTCCATCTGTTCAAG+TGG 0.537978 3.3:-4010921 None:intergenic
GTGTCACAATGTATAGTTGG+AGG 0.538695 3.3:+4010567 MS.gene56212:CDS
ATATAGACCACAACTTGTAA+TGG 0.539544 3.3:+4010326 MS.gene56212:CDS
TGGAACTGCTGCCATGGCTA+GGG 0.539800 3.3:-4010094 None:intergenic
CTTCTATCATCTGTCATGAC+AGG 0.539953 3.3:+4010450 MS.gene56212:CDS
TGCACCTAGTGTTAGGAAAG+AGG 0.540574 3.3:-4010118 None:intergenic
AGAAAGTGTGGCAGGAACAT+TGG 0.544957 3.3:+4010937 MS.gene56212:CDS
AATACGAGGCGTAGAAGATG+TGG 0.545686 3.3:+4010218 MS.gene56212:CDS
GGTGACATAAGAAGCAAAGA+AGG 0.545956 3.3:-4009222 None:intergenic
AGAAAATCCCAGACTTGAAG+TGG 0.546285 3.3:-4010827 None:intergenic
TTTATGTTGCTGGGTTTGGA+TGG 0.547243 3.3:+4010667 MS.gene56212:CDS
AACCACCCAAGACCATCAAA+AGG 0.547849 3.3:+4010176 MS.gene56212:CDS
CCTAGTGTTAGGAAAGAGGC+TGG 0.548531 3.3:-4010114 None:intergenic
ATGCTCATAGTAGATAAACT+TGG 0.552754 3.3:+4010504 MS.gene56212:CDS
GCTGGGTTTGGATGGTCGTG+GGG 0.552928 3.3:+4010675 MS.gene56212:CDS
GCAGTTCATCTGAAAGATCA+TGG 0.556890 3.3:+4010597 MS.gene56212:CDS
CCAGCTGATCTAATCTCCAA+TGG 0.557191 3.3:-4010732 None:intergenic
ACAGATGGAGAAAGTGTGGC+AGG 0.558422 3.3:+4010929 MS.gene56212:CDS
TCTGTCATGACAGGCATAGT+AGG 0.559364 3.3:+4010459 MS.gene56212:CDS
GCACCACCTGCAACGATAGA+CGG 0.560330 3.3:-4009263 None:intergenic
TTGGCGTGTATCCCTAGCCA+TGG 0.560781 3.3:+4010083 MS.gene56212:CDS
AACGTGTACATGCTCATAGT+CGG 0.562079 3.3:+4009326 MS.gene56212:CDS
AACAGGTGGAGTGACATCAA+TGG 0.564414 3.3:+4009061 MS.gene56212:CDS
CCAGCCTCTTTCCTAACACT+AGG 0.567400 3.3:+4010114 MS.gene56212:CDS
TGGCATTACCTAGATTTAGA+GGG 0.568145 3.3:+4009965 MS.gene56212:CDS
TCATCTTAAGGTATATGTTG+TGG 0.570778 3.3:-4009106 None:intergenic
AGAGGCTGGAACTGCTGCCA+TGG 0.573628 3.3:-4010100 None:intergenic
GTGAACAAAAGAACAATGGC+AGG 0.579074 3.3:+4008964 MS.gene56212:CDS
AAGTAGAACTTGCTTTAGTG+AGG 0.579380 3.3:-4010257 None:intergenic
AGACTTGAAGTGGCAAAGCA+TGG 0.583713 3.3:-4010817 None:intergenic
AGGAGAACCTTGTTCATAGT+CGG 0.592391 3.3:+4010528 MS.gene56212:CDS
ATGACAGGCATAGTAGGTAC+CGG 0.599722 3.3:+4010465 MS.gene56212:CDS
CGGCTTGCGACCAAAGACTC+TGG 0.601335 3.3:-4009243 None:intergenic
GGCTATTGGGAGTTTCTGGT+AGG 0.603131 3.3:-4010146 None:intergenic
TTTAGAGGGGCAATAAACAA+TGG 0.606067 3.3:+4009979 MS.gene56212:CDS
GGCATTACCTAGATTTAGAG+GGG 0.616654 3.3:+4009966 MS.gene56212:CDS
TTGAACAGATGGAGAAAGTG+TGG 0.624733 3.3:+4010925 MS.gene56212:CDS
TATGGAACAGAAAAGATCAA+AGG 0.624964 3.3:+4010051 MS.gene56212:CDS
AATGCCTCCGACTATGAACA+AGG 0.629460 3.3:-4010535 None:intergenic
TGTATGATGGCTGCTATGGG+AGG 0.631318 3.3:+4009011 MS.gene56212:CDS
AAGCCGTCTATCGTTGCAGG+TGG 0.640393 3.3:+4009260 MS.gene56212:CDS
GTTAAAAGCTGCACCTCCAA+GGG 0.641610 3.3:-4009306 None:intergenic
TCATAGTAGATAAACTTGGA+AGG 0.643555 3.3:+4010508 MS.gene56212:CDS
AGATGTGGAAGCAGAACTCG+AGG 0.644676 3.3:+4010233 MS.gene56212:CDS
CCAAGTGAACAAAAGAACAA+TGG 0.648473 3.3:+4008960 MS.gene56212:CDS
AAAACCAGCAACATAAAGAG+AGG 0.649420 3.3:-4009192 None:intergenic
AAGACCATCAAAAGGCGAAG+CGG 0.653340 3.3:+4010184 MS.gene56212:CDS
AGAACCTTGTTCATAGTCGG+AGG 0.654101 3.3:+4010531 MS.gene56212:CDS
CGGGTACTTCAACGAATACG+AGG 0.655625 3.3:+4010204 MS.gene56212:CDS
AATTGTTCTGAAAAGTAAAG+GGG 0.667829 3.3:-4010406 None:intergenic
TATGACATTGGTATAACAGG+TGG 0.678566 3.3:+4009047 MS.gene56212:CDS
CTTGGTACTAACCAACCTAG+TGG 0.681267 3.3:-4010699 None:intergenic
GGAACAGAAAAGATCAAAGG+CGG 0.696154 3.3:+4010054 MS.gene56212:CDS
GTTCATCTGAAAGATCATGG+TGG 0.754590 3.3:+4010600 MS.gene56212:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCTTAGATATATATTTGTT+TGG - chr3.3:4009836-4009855 None:intergenic 15.0%
!!! TTGATAATTAGTAAAAATCA+AGG - chr3.3:4009528-4009547 None:intergenic 15.0%
!! ATTTACGTGTTAAAATTTCA+AGG - chr3.3:4009557-4009576 None:intergenic 20.0%
!! GTTATAAATTGTTGTGTATA+AGG + chr3.3:4009646-4009665 MS.gene56212:intron 20.0%
!!! TAATTTGATTGATAGTTTCA+GGG - chr3.3:4009503-4009522 None:intergenic 20.0%
!!! TATATTTGTTTGGTTCAAAT+TGG - chr3.3:4009826-4009845 None:intergenic 20.0%
!!! TTTAGTATTTCTATGTGTTT+GGG - chr3.3:4009426-4009445 None:intergenic 20.0%
!!! TTTTAGTATTTCTATGTGTT+TGG - chr3.3:4009427-4009446 None:intergenic 20.0%
! ATGATATGTATTTATGTTGC+TGG + chr3.3:4010657-4010676 MS.gene56212:CDS 25.0%
! TATCATCTGATTTCATCTTA+AGG - chr3.3:4009121-4009140 None:intergenic 25.0%
! TGATATGTATTTATGTTGCT+GGG + chr3.3:4010658-4010677 MS.gene56212:CDS 25.0%
! TGGAAGAATTTATTCAGAAA+TGG - chr3.3:4009089-4009108 None:intergenic 25.0%
!! CTAATTTGATTGATAGTTTC+AGG - chr3.3:4009504-4009523 None:intergenic 25.0%
!! TACTTGACATGATTTTCTAT+CGG - chr3.3:4009711-4009730 None:intergenic 25.0%
!! TTGATCGGATAAATGTTTTT+GGG - chr3.3:4009686-4009705 None:intergenic 25.0%
!! TTTGATCGGATAAATGTTTT+TGG - chr3.3:4009687-4009706 None:intergenic 25.0%
!!! AATTGTTCTGAAAAGTAAAG+GGG - chr3.3:4010409-4010428 None:intergenic 25.0%
!!! ATTTTGAAACTAGTGTGAAT+AGG + chr3.3:4009468-4009487 MS.gene56212:intron 25.0%
!!! CAATTGTTCTGAAAAGTAAA+GGG - chr3.3:4010410-4010429 None:intergenic 25.0%
!!! CTTTACTTTTCAGAACAATT+GGG + chr3.3:4010409-4010428 MS.gene56212:CDS 25.0%
!!! TTTTGAAACTAGTGTGAATA+GGG + chr3.3:4009469-4009488 MS.gene56212:intron 25.0%
AAATTGTTGTGTATAAGGCA+AGG + chr3.3:4009651-4009670 MS.gene56212:intron 30.0%
ACAAGAGAGAACAACATAAA+GGG - chr3.3:4008994-4009013 None:intergenic 30.0%
ATATAGACCACAACTTGTAA+TGG + chr3.3:4010326-4010345 MS.gene56212:CDS 30.0%
ATGCTCATAGTAGATAAACT+TGG + chr3.3:4010504-4010523 MS.gene56212:CDS 30.0%
GAAAATCATGTCAAGTAACA+TGG + chr3.3:4009714-4009733 MS.gene56212:intron 30.0%
TACAAGAGAGAACAACATAA+AGG - chr3.3:4008995-4009014 None:intergenic 30.0%
TATGGAACAGAAAAGATCAA+AGG + chr3.3:4010051-4010070 MS.gene56212:CDS 30.0%
TCATAGTAGATAAACTTGGA+AGG + chr3.3:4010508-4010527 MS.gene56212:CDS 30.0%
TCATCTTAAGGTATATGTTG+TGG - chr3.3:4009109-4009128 None:intergenic 30.0%
TCTGCTAATCTAATCAACTA+TGG + chr3.3:4010033-4010052 MS.gene56212:CDS 30.0%
TGACATTGATGTAGATTTCA+CGG - chr3.3:4009603-4009622 None:intergenic 30.0%
TTTGTGTCACAATGTATAGT+TGG + chr3.3:4010564-4010583 MS.gene56212:CDS 30.0%
! AAGTAAAGGGTATGCTTATA+TGG + chr3.3:4010626-4010645 MS.gene56212:CDS 30.0%
! ACATTATGTCCTAATTTTGC+AGG + chr3.3:4009918-4009937 MS.gene56212:intron 30.0%
! ATAACAAGCAATTTTCTCCT+TGG - chr3.3:4009631-4009650 None:intergenic 30.0%
! GATTTTCTATCGGATTTGAT+CGG - chr3.3:4009701-4009720 None:intergenic 30.0%
!! ATCATGGTGGATTAAGTAAA+GGG + chr3.3:4010613-4010632 MS.gene56212:CDS 30.0%
!! CCAATTGTTCTGAAAAGTAA+AGG - chr3.3:4010411-4010430 None:intergenic 30.0%
!! CCTTTACTTTTCAGAACAAT+TGG + chr3.3:4010408-4010427 MS.gene56212:CDS 30.0%
!! TTCCAATTAAGCATTGGTAT+AGG + chr3.3:4010003-4010022 MS.gene56212:CDS 30.0%
!!! TGGTTTTGGAAGAAAATAGT+GGG + chr3.3:4010957-4010976 MS.gene56212:CDS 30.0%
!!! TTGGTTTTGGAAGAAAATAG+TGG + chr3.3:4010956-4010975 MS.gene56212:CDS 30.0%
AAAACCAGCAACATAAAGAG+AGG - chr3.3:4009195-4009214 None:intergenic 35.0%
AATGGCTTCCAATTAAGCAT+TGG + chr3.3:4009997-4010016 MS.gene56212:CDS 35.0%
ACATCAATGTCACATTTCCA+AGG + chr3.3:4009611-4009630 MS.gene56212:intron 35.0%
ACATTGATGTAGATTTCACG+GGG - chr3.3:4009601-4009620 None:intergenic 35.0%
ATGGCATTACCTAGATTTAG+AGG + chr3.3:4009964-4009983 MS.gene56212:CDS 35.0%
CATTGATATGAATGTCGAAC+CGG - chr3.3:4010487-4010506 None:intergenic 35.0%
CCAAGTGAACAAAAGAACAA+TGG + chr3.3:4008960-4008979 MS.gene56212:CDS 35.0%
CTATGTGTTTGGGAAGAAAA+GGG - chr3.3:4009416-4009435 None:intergenic 35.0%
GACATTGATGTAGATTTCAC+GGG - chr3.3:4009602-4009621 None:intergenic 35.0%
GTCATATTTGGCTATGACAT+TGG + chr3.3:4009035-4009054 MS.gene56212:CDS 35.0%
TATGACATTGGTATAACAGG+TGG + chr3.3:4009047-4009066 MS.gene56212:CDS 35.0%
TCCAATGGAAAAATCTCACT+TGG - chr3.3:4010720-4010739 None:intergenic 35.0%
TCCTCTATATCTCTCAGAAA+TGG + chr3.3:4009945-4009964 MS.gene56212:CDS 35.0%
TCTATGTGTTTGGGAAGAAA+AGG - chr3.3:4009417-4009436 None:intergenic 35.0%
TGGCATTACCTAGATTTAGA+GGG + chr3.3:4009965-4009984 MS.gene56212:CDS 35.0%
TGTATTTATGTTGCTGGGTT+TGG + chr3.3:4010663-4010682 MS.gene56212:CDS 35.0%
TGTTGTTCTCTCTTGTATGA+TGG + chr3.3:4008998-4009017 MS.gene56212:CDS 35.0%
TTTAGAGGGGCAATAAACAA+TGG + chr3.3:4009979-4009998 MS.gene56212:CDS 35.0%
TTTATTGCCCCTCTAAATCT+AGG - chr3.3:4009976-4009995 None:intergenic 35.0%
! AAGTAGAACTTGCTTTAGTG+AGG - chr3.3:4010260-4010279 None:intergenic 35.0%
! ACCAAGTGAGATTTTTCCAT+TGG + chr3.3:4010716-4010735 MS.gene56212:CDS 35.0%
! ATGTATAGTTGGAGGCATAA+TGG + chr3.3:4010575-4010594 MS.gene56212:CDS 35.0%
! CATTTTTCCAACAAGTGACA+GGG + chr3.3:4010361-4010380 MS.gene56212:CDS 35.0%
! CCATTGTTCTTTTGTTCACT+TGG - chr3.3:4008963-4008982 None:intergenic 35.0%
! CTTTTCAGAACAATTGGGTT+AGG + chr3.3:4010414-4010433 MS.gene56212:CDS 35.0%
! TTTCTTCTTCTTTGGAGGTT+GGG + chr3.3:4010845-4010864 MS.gene56212:CDS 35.0%
!! GATCATGGTGGATTAAGTAA+AGG + chr3.3:4010612-4010631 MS.gene56212:CDS 35.0%
!! TCTGGGATTTTCTTCTTCTT+TGG + chr3.3:4010837-4010856 MS.gene56212:CDS 35.0%
!! TTTTCTTCTTCTTTGGAGGT+TGG + chr3.3:4010844-4010863 MS.gene56212:CDS 35.0%
AACGTGTACATGCTCATAGT+CGG + chr3.3:4009326-4009345 MS.gene56212:CDS 40.0%
AAGTGACGACAGAGTTAAAG+AGG + chr3.3:4010986-4011005 MS.gene56212:CDS 40.0%
ACATCCTCTCTTTATGTTGC+TGG + chr3.3:4009188-4009207 MS.gene56212:CDS 40.0%
ACTTTCTCCATCTGTTCAAG+TGG - chr3.3:4010924-4010943 None:intergenic 40.0%
AGAAAAGATCAAAGGCGGTT+GGG + chr3.3:4010059-4010078 MS.gene56212:CDS 40.0%
AGAAAATCCCAGACTTGAAG+TGG - chr3.3:4010830-4010849 None:intergenic 40.0%
AGGAGAACCTTGTTCATAGT+CGG + chr3.3:4010528-4010547 MS.gene56212:CDS 40.0%
ATTAGGCTATTGGGAGTTTC+TGG - chr3.3:4010153-4010172 None:intergenic 40.0%
CGCCTATACCAATGCTTAAT+TGG - chr3.3:4010008-4010027 None:intergenic 40.0%
CTTCTATCATCTGTCATGAC+AGG + chr3.3:4010450-4010469 MS.gene56212:CDS 40.0%
GCAGTTCATCTGAAAGATCA+TGG + chr3.3:4010597-4010616 MS.gene56212:CDS 40.0%
GCTATTGCCATTACAAGTTG+TGG - chr3.3:4010336-4010355 None:intergenic 40.0%
GGAAAGAAAAATTGGCTACC+TGG - chr3.3:4009388-4009407 None:intergenic 40.0%
GGAACAGAAAAGATCAAAGG+CGG + chr3.3:4010054-4010073 MS.gene56212:CDS 40.0%
GGCATTACCTAGATTTAGAG+GGG + chr3.3:4009966-4009985 MS.gene56212:CDS 40.0%
GGCTATGACATTGGTATAAC+AGG + chr3.3:4009044-4009063 MS.gene56212:CDS 40.0%
GGGTGACAGGAAAGAAAAAT+TGG - chr3.3:4009396-4009415 None:intergenic 40.0%
GGTGACATAAGAAGCAAAGA+AGG - chr3.3:4009225-4009244 None:intergenic 40.0%
GTGAACAAAAGAACAATGGC+AGG + chr3.3:4008964-4008983 MS.gene56212:CDS 40.0%
GTGTCACAATGTATAGTTGG+AGG + chr3.3:4010567-4010586 MS.gene56212:CDS 40.0%
GTTCATCTGAAAGATCATGG+TGG + chr3.3:4010600-4010619 MS.gene56212:CDS 40.0%
TCTTATGTCACCAGAGTCTT+TGG + chr3.3:4009233-4009252 MS.gene56212:CDS 40.0%
TCTTGTATGATGGCTGCTAT+GGG + chr3.3:4009008-4009027 MS.gene56212:CDS 40.0%
TTGAACAGATGGAGAAAGTG+TGG + chr3.3:4010925-4010944 MS.gene56212:CDS 40.0%
TTTATGTTGCTGGGTTTGGA+TGG + chr3.3:4010667-4010686 MS.gene56212:CDS 40.0%
! CCTGTCACTTGTTGGAAAAA+TGG - chr3.3:4010363-4010382 None:intergenic 40.0%
! GCCATTTCTGAGAGATATAG+AGG - chr3.3:4009949-4009968 None:intergenic 40.0%
! GGGATTTTCTTCTTCTTTGG+AGG + chr3.3:4010840-4010859 MS.gene56212:CDS 40.0%
! GTGGTTTGGATTAGGCTATT+GGG - chr3.3:4010162-4010181 None:intergenic 40.0%
! TCGACTTTTACTTGGAGTTG+GGG + chr3.3:4009349-4009368 MS.gene56212:CDS 40.0%
!! AAATGTGCCACTTGAACAGA+TGG + chr3.3:4010914-4010933 MS.gene56212:CDS 40.0%
!! ATAGTCGGTCGACTTTTACT+TGG + chr3.3:4009341-4009360 MS.gene56212:CDS 40.0%
!! CCATTTTTCCAACAAGTGAC+AGG + chr3.3:4010360-4010379 MS.gene56212:CDS 40.0%
!! GTCGACTTTTACTTGGAGTT+GGG + chr3.3:4009348-4009367 MS.gene56212:CDS 40.0%
!!! AGTGGCACATTTTTTGTCTC+TGG - chr3.3:4010906-4010925 None:intergenic 40.0%
!!! CACTTTTTCCTGAAGAGACA+TGG + chr3.3:4009745-4009764 MS.gene56212:intron 40.0%
!!! GCACATTTTTTGTCTCTGGT+AGG - chr3.3:4010902-4010921 None:intergenic 40.0%
AACAGGTGGAGTGACATCAA+TGG + chr3.3:4009061-4009080 MS.gene56212:CDS 45.0%
AACCACCCAAGACCATCAAA+AGG + chr3.3:4010176-4010195 MS.gene56212:CDS 45.0%
AAGACCATCAAAAGGCGAAG+CGG + chr3.3:4010184-4010203 MS.gene56212:CDS 45.0%
AATACGAGGCGTAGAAGATG+TGG + chr3.3:4010218-4010237 MS.gene56212:CDS 45.0%
AATGCCTCCGACTATGAACA+AGG - chr3.3:4010538-4010557 None:intergenic 45.0%
AGAACCTTGTTCATAGTCGG+AGG + chr3.3:4010531-4010550 MS.gene56212:CDS 45.0%
AGACTTGAAGTGGCAAAGCA+TGG - chr3.3:4010820-4010839 None:intergenic 45.0%
ATGACAGGCATAGTAGGTAC+CGG + chr3.3:4010465-4010484 MS.gene56212:CDS 45.0%
CAGAAAAGATCAAAGGCGGT+TGG + chr3.3:4010058-4010077 MS.gene56212:CDS 45.0%
CCAGCTGATCTAATCTCCAA+TGG - chr3.3:4010735-4010754 None:intergenic 45.0%
CCATTGGAGATTAGATCAGC+TGG + chr3.3:4010732-4010751 MS.gene56212:CDS 45.0%
CTCTTGTATGATGGCTGCTA+TGG + chr3.3:4009007-4009026 MS.gene56212:CDS 45.0%
CTTGGTACTAACCAACCTAG+TGG - chr3.3:4010702-4010721 None:intergenic 45.0%
GAAAAGATCAAAGGCGGTTG+GGG + chr3.3:4010060-4010079 MS.gene56212:CDS 45.0%
GAAGAGACATGGCAGTGATA+TGG + chr3.3:4009756-4009775 MS.gene56212:intron 45.0%
GAGGAACTGCCTGCAAAATT+AGG - chr3.3:4009930-4009949 None:intergenic 45.0%
GTTAAAAGCTGCACCTCCAA+GGG - chr3.3:4009309-4009328 None:intergenic 45.0%
TATCACTGCCATGTCTCTTC+AGG - chr3.3:4009756-4009775 None:intergenic 45.0%
TCTGTCATGACAGGCATAGT+AGG + chr3.3:4010459-4010478 MS.gene56212:CDS 45.0%
TGCACCTAGTGTTAGGAAAG+AGG - chr3.3:4010121-4010140 None:intergenic 45.0%
TTTGGGAAGAAAAGGGTGAC+AGG - chr3.3:4009409-4009428 None:intergenic 45.0%
! AGAAAGTGTGGCAGGAACAT+TGG + chr3.3:4010937-4010956 MS.gene56212:CDS 45.0%
! ATGCTTTGCCACTTCAAGTC+TGG + chr3.3:4010819-4010838 MS.gene56212:CDS 45.0%
! CATTGATCCCTGTCACTTGT+TGG - chr3.3:4010371-4010390 None:intergenic 45.0%
! CTTTTACTTGGAGTTGGGGT+TGG + chr3.3:4009353-4009372 MS.gene56212:CDS 45.0%
! GGAAAAGTGCACCTAGTGTT+AGG - chr3.3:4010128-4010147 None:intergenic 45.0%
! GGTGGTTTGGATTAGGCTAT+TGG - chr3.3:4010163-4010182 None:intergenic 45.0%
! TGCTTTGCCACTTCAAGTCT+GGG + chr3.3:4010820-4010839 MS.gene56212:CDS 45.0%
! TTTGATGGTCTTGGGTGGTT+TGG - chr3.3:4010176-4010195 None:intergenic 45.0%
!! CTTCGCCTTTTGATGGTCTT+GGG - chr3.3:4010184-4010203 None:intergenic 45.0%
!! GCTATGGGAGGTGTCATATT+TGG + chr3.3:4009023-4009042 MS.gene56212:CDS 45.0%
!! GGTCGACTTTTACTTGGAGT+TGG + chr3.3:4009347-4009366 MS.gene56212:CDS 45.0%
!!! TGTGGCAGGAACATTGGTTT+TGG + chr3.3:4010943-4010962 MS.gene56212:CDS 45.0%
AGACCATCAAAAGGCGAAGC+GGG + chr3.3:4010185-4010204 MS.gene56212:CDS 50.0%
AGATGTGGAAGCAGAACTCG+AGG + chr3.3:4010233-4010252 MS.gene56212:CDS 50.0%
CCAGCCTCTTTCCTAACACT+AGG + chr3.3:4010114-4010133 MS.gene56212:CDS 50.0%
CCTAGTGTTAGGAAAGAGGC+TGG - chr3.3:4010117-4010136 None:intergenic 50.0%
CGGGTACTTCAACGAATACG+AGG + chr3.3:4010204-4010223 MS.gene56212:CDS 50.0%
CGTTAAAAGCTGCACCTCCA+AGG - chr3.3:4009310-4009329 None:intergenic 50.0%
TGTATGATGGCTGCTATGGG+AGG + chr3.3:4009011-4009030 MS.gene56212:CDS 50.0%
! ACAGATGGAGAAAGTGTGGC+AGG + chr3.3:4010929-4010948 MS.gene56212:CDS 50.0%
! CTTCTTCTTTGGAGGTTGGG+TGG + chr3.3:4010848-4010867 MS.gene56212:CDS 50.0%
! GGTCTTGGGTGGTTTGGATT+AGG - chr3.3:4010170-4010189 None:intergenic 50.0%
!! GCTTCGCCTTTTGATGGTCT+TGG - chr3.3:4010185-4010204 None:intergenic 50.0%
!! GGCTATTGGGAGTTTCTGGT+AGG - chr3.3:4010149-4010168 None:intergenic 50.0%
!!! TGGGGTTGGTTTTGCTAACC+AGG + chr3.3:4009367-4009386 MS.gene56212:CDS 50.0%
AAGCCGTCTATCGTTGCAGG+TGG + chr3.3:4009260-4009279 MS.gene56212:CDS 55.0%
AGATCAAAGGCGGTTGGGGT+TGG + chr3.3:4010064-4010083 MS.gene56212:CDS 55.0%
GCACCACCTGCAACGATAGA+CGG - chr3.3:4009266-4009285 None:intergenic 55.0%
TGCTGGGTTTGGATGGTCGT+GGG + chr3.3:4010674-4010693 MS.gene56212:CDS 55.0%
TGGAACTGCTGCCATGGCTA+GGG - chr3.3:4010097-4010116 None:intergenic 55.0%
TTGCTGGGTTTGGATGGTCG+TGG + chr3.3:4010673-4010692 MS.gene56212:CDS 55.0%
TTGGCGTGTATCCCTAGCCA+TGG + chr3.3:4010083-4010102 MS.gene56212:CDS 55.0%
! CTTCTTTGGAGGTTGGGTGG+TGG + chr3.3:4010851-4010870 MS.gene56212:CDS 55.0%
! GTACCCGCTTCGCCTTTTGA+TGG - chr3.3:4010191-4010210 None:intergenic 55.0%
!! CGCCTTTTGATGGTCTTGGG+TGG - chr3.3:4010181-4010200 None:intergenic 55.0%
AGAGGCTGGAACTGCTGCCA+TGG - chr3.3:4010103-4010122 None:intergenic 60.0%
CGCAAGCCGTCTATCGTTGC+AGG + chr3.3:4009257-4009276 MS.gene56212:CDS 60.0%
CGGCTTGCGACCAAAGACTC+TGG - chr3.3:4009246-4009265 None:intergenic 60.0%
CTGGAACTGCTGCCATGGCT+AGG - chr3.3:4010098-4010117 None:intergenic 60.0%
GCTGGGTTTGGATGGTCGTG+GGG + chr3.3:4010675-4010694 MS.gene56212:CDS 60.0%
GGATGGTCGTGGGGTCCACT+AGG + chr3.3:4010684-4010703 MS.gene56212:CDS 65.0%
GGTCGTGGGGTCCACTAGGT+TGG + chr3.3:4010688-4010707 MS.gene56212:CDS 65.0%
TGCACCTCCAAGGGCTGTGC+CGG - chr3.3:4009300-4009319 None:intergenic 65.0%
TTCCTTGCCGGCACAGCCCT+TGG + chr3.3:4009290-4009309 MS.gene56212:CDS 65.0%
!! GGTGGTGCTGCGTTCCTTGC+CGG + chr3.3:4009278-4009297 MS.gene56212:CDS 65.0%
CTTGCCGGCACAGCCCTTGG+AGG + chr3.3:4009293-4009312 MS.gene56212:CDS 70.0%
! CTCCAAGGGCTGTGCCGGCA+AGG - chr3.3:4009295-4009314 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 4008933 4011016 4008933 ID=MS.gene56212
chr3.3 mRNA 4008933 4011016 4008933 ID=MS.gene56212.t1;Parent=MS.gene56212
chr3.3 exon 4008933 4009388 4008933 ID=MS.gene56212.t1.exon1;Parent=MS.gene56212.t1
chr3.3 CDS 4008933 4009388 4008933 ID=cds.MS.gene56212.t1;Parent=MS.gene56212.t1
chr3.3 exon 4009940 4011016 4009940 ID=MS.gene56212.t1.exon2;Parent=MS.gene56212.t1
chr3.3 CDS 4009940 4011016 4009940 ID=cds.MS.gene56212.t1;Parent=MS.gene56212.t1
Gene Sequence

>MS.gene56212

ATGGCAGTTGGATTGGCTATAACATGTCCAAGTGAACAAAAGAACAATGGCAGGATAACCCTTTATGTTGTTCTCTCTTGTATGATGGCTGCTATGGGAGGTGTCATATTTGGCTATGACATTGGTATAACAGGTGGAGTGACATCAATGGAACCATTTCTGAATAAATTCTTCCACAACATATACCTTAAGATGAAATCAGATGATAAAGTTAGCAACTATTGCATGTTTGACAGTCAACTACTGACTTCTTTTACATCCTCTCTTTATGTTGCTGGTTTTGTTACTTCCTTCTTTGCTTCTTATGTCACCAGAGTCTTTGGTCGCAAGCCGTCTATCGTTGCAGGTGGTGCTGCGTTCCTTGCCGGCACAGCCCTTGGAGGTGCAGCTTTTAACGTGTACATGCTCATAGTCGGTCGACTTTTACTTGGAGTTGGGGTTGGTTTTGCTAACCAGGTAGCCAATTTTTCTTTCCTGTCACCCTTTTCTTCCCAAACACATAGAAATACTAAAATAGTTTCATAATAATCAAGAGATTTTGAAACTAGTGTGAATAGGGAATTTTGTCCCTGAAACTATCAATCAAATTAGTCCTTGATTTTTACTAATTATCAATTTCGTCCTTGAAATTTTAACACGTAAATAAAAAATGAAGATGTATCAATCCCCGTGAAATCTACATCAATGTCACATTTCCAAGGAGAAAATTGCTTGTTATAAATTGTTGTGTATAAGGCAAGGAGTTACTTTCCCAAAAACATTTATCCGATCAAATCCGATAGAAAATCATGTCAAGTAACATGGAGACGTGACACTTTTTCCTGAAGAGACATGGCAGTGATATGGAGTTCACGTCAAGCGTCACATCTTCACTTAAAGTATAAGTTAATCCAATTTGAACCAAACAAATATATATCTAAGAAGTTTATCTAATATCTAACATCAATTGTCATGCTCTAATTACAGTTAGACTACAACTTCTTTCACATTATGTCCTAATTTTGCAGGCAGTTCCTCTATATCTCTCAGAAATGGCATTACCTAGATTTAGAGGGGCAATAAACAATGGCTTCCAATTAAGCATTGGTATAGGCGCTTTGTCTGCTAATCTAATCAACTATGGAACAGAAAAGATCAAAGGCGGTTGGGGTTGGCGTGTATCCCTAGCCATGGCAGCAGTTCCAGCCTCTTTCCTAACACTAGGTGCACTTTTCCTACCAGAAACTCCCAATAGCCTAATCCAAACCACCCAAGACCATCAAAAGGCGAAGCGGGTACTTCAACGAATACGAGGCGTAGAAGATGTGGAAGCAGAACTCGAGGACCTCACTAAAGCAAGTTCTACTTCAAAAACAAGTTCACAACAATCATTTAAGATTATATTGAAAAGAAGATATAGACCACAACTTGTAATGGCAATAGCAATACCATTTTTCCAACAAGTGACAGGGATCAATGTCATCGCTTTCTATGCCCCTTTACTTTTCAGAACAATTGGGTTAGGAGAAAGTGCATCGCTTCTATCATCTGTCATGACAGGCATAGTAGGTACCGGTTCGACATTCATATCAATGCTCATAGTAGATAAACTTGGAAGGAGAACCTTGTTCATAGTCGGAGGCATTCAAATGTTTGTGTCACAATGTATAGTTGGAGGCATAATGGCAGTTCATCTGAAAGATCATGGTGGATTAAGTAAAGGGTATGCTTATATGGTTTTGATAATGATATGTATTTATGTTGCTGGGTTTGGATGGTCGTGGGGTCCACTAGGTTGGTTAGTACCAAGTGAGATTTTTCCATTGGAGATTAGATCAGCTGGACAAAGCATCACAGTAGCAGTGAGTTTTCTCTTCACTTTTATTGTTGCTCAGACTTTTCTATCCATGCTTTGCCACTTCAAGTCTGGGATTTTCTTCTTCTTTGGAGGTTGGGTGGTGGTGATGACTGTGTTTGTGTATTGTTTCCTACCAGAGACAAAAAATGTGCCACTTGAACAGATGGAGAAAGTGTGGCAGGAACATTGGTTTTGGAAGAAAATAGTGGGAAAAATAAGTGACGACAGAGTTAAAGAGGAATTATAA
Protein sequence

>MS.gene56212.t1

MAVGLAITCPSEQKNNGRITLYVVLSCMMAAMGGVIFGYDIGITGGVTSMEPFLNKFFHNIYLKMKSDDKVSNYCMFDSQLLTSFTSSLYVAGFVTSFFASYVTRVFGRKPSIVAGGAAFLAGTALGGAAFNVYMLIVGRLLLGVGVGFANQAVPLYLSEMALPRFRGAINNGFQLSIGIGALSANLINYGTEKIKGGWGWRVSLAMAAVPASFLTLGALFLPETPNSLIQTTQDHQKAKRVLQRIRGVEDVEAELEDLTKASSTSKTSSQQSFKIILKRRYRPQLVMAIAIPFFQQVTGINVIAFYAPLLFRTIGLGESASLLSSVMTGIVGTGSTFISMLIVDKLGRRTLFIVGGIQMFVSQCIVGGIMAVHLKDHGGLSKGYAYMVLIMICIYVAGFGWSWGPLGWLVPSEIFPLEIRSAGQSITVAVSFLFTFIVAQTFLSMLCHFKSGIFFFFGGWVVVMTVFVYCFLPETKNVPLEQMEKVWQEHWFWKKIVGKISDDRVKEEL