AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene56211

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56211.t1 MTR_3g008160 98.821 509 6 0 1 509 1 509 0.0 1018
MS.gene56211.t1 MTR_3g008160 99.348 460 3 0 50 509 1 460 0.0 929
MS.gene56211.t1 MTR_3g008170 76.289 485 114 1 16 499 16 500 0.0 766
MS.gene56211.t1 MTR_0204s0020 59.213 483 194 3 15 497 13 492 0.0 602
MS.gene56211.t1 MTR_5g006070 57.026 491 207 4 15 502 14 503 0.0 598
MS.gene56211.t1 MTR_5g082540 60.081 496 192 4 9 501 9 501 0.0 597
MS.gene56211.t1 MTR_7g091690 59.834 483 191 3 15 497 19 498 0.0 593
MS.gene56211.t1 MTR_5g094760 57.809 493 203 4 10 500 12 501 0.0 592
MS.gene56211.t1 MTR_0204s0020 58.592 483 194 4 15 497 13 489 0.0 591
MS.gene56211.t1 MTR_1g038630 58.350 497 201 4 10 503 10 503 0.0 585
MS.gene56211.t1 MTR_4g091370 58.858 508 203 3 1 503 1 507 0.0 575
MS.gene56211.t1 MTR_4g116790 55.738 488 213 3 15 502 19 503 0.0 575
MS.gene56211.t1 MTR_0204s0040 55.761 486 212 3 15 500 21 503 0.0 574
MS.gene56211.t1 MTR_4g116770 55.761 486 212 3 15 500 217 699 0.0 574
MS.gene56211.t1 MTR_0009s0370 56.701 485 205 3 15 495 13 496 0.0 560
MS.gene56211.t1 MTR_5g041550 57.515 499 205 4 8 500 6 503 0.0 558
MS.gene56211.t1 MTR_1g104780 56.200 500 212 6 11 505 10 507 0.0 553
MS.gene56211.t1 MTR_3g093010 57.055 489 205 3 13 497 12 499 0.0 550
MS.gene56211.t1 MTR_1g104770 53.306 484 222 4 15 495 15 497 0.0 548
MS.gene56211.t1 MTR_1g038600 56.250 496 195 5 10 503 10 485 0.0 545
MS.gene56211.t1 MTR_1g104750 53.209 483 223 3 15 495 15 496 0.0 544
MS.gene56211.t1 MTR_5g006070 56.140 456 196 4 50 502 1 455 0.0 542
MS.gene56211.t1 MTR_3g074390 52.096 501 232 6 1 497 6 502 0.0 538
MS.gene56211.t1 MTR_4g090600 56.275 510 214 3 1 502 1 509 0.0 535
MS.gene56211.t1 MTR_3g074410 52.535 493 225 7 18 505 20 508 0.0 532
MS.gene56211.t1 MTR_6g087040 52.941 493 229 3 15 506 18 508 0.0 531
MS.gene56211.t1 MTR_6g088375 52.941 493 229 3 15 506 18 508 0.0 531
MS.gene56211.t1 MTR_3g023480 53.924 497 223 4 15 507 13 507 0.0 522
MS.gene56211.t1 MTR_8g102860 51.904 499 234 4 15 509 18 514 6.99e-178 510
MS.gene56211.t1 MTR_3g074270 49.697 495 220 6 16 509 16 482 5.11e-175 501
MS.gene56211.t1 MTR_3g093060 55.654 451 194 3 50 495 1 450 1.38e-173 497
MS.gene56211.t1 MTR_3g007910 52.041 490 200 6 11 497 10 467 1.07e-172 495
MS.gene56211.t1 MTR_8g102860 51.724 464 218 4 50 509 1 462 4.58e-163 470
MS.gene56211.t1 MTR_4g116790 54.571 350 156 3 15 364 19 365 1.17e-136 400
MS.gene56211.t1 MTR_3g074380 53.757 346 154 5 17 360 20 361 8.74e-128 377
MS.gene56211.t1 MTR_3g074370 48.137 322 160 5 188 505 20 338 6.23e-109 328
MS.gene56211.t1 MTR_3g074320 48.137 322 160 5 188 505 20 338 8.35e-109 327
MS.gene56211.t1 MTR_3g074340 47.826 322 161 5 188 505 20 338 1.45e-108 327
MS.gene56211.t1 MTR_3g074400 39.780 455 216 10 50 481 1 420 3.08e-102 313
MS.gene56211.t1 MTR_6g088450 29.194 459 293 10 28 476 63 499 9.81e-56 194
MS.gene56211.t1 MTR_4g069500 26.376 527 339 11 3 502 6 510 5.19e-54 190
MS.gene56211.t1 MTR_3g116240 28.184 479 301 10 27 484 32 488 6.83e-53 187
MS.gene56211.t1 MTR_8g103500 26.295 502 331 9 18 505 13 489 8.02e-52 184
MS.gene56211.t1 MTR_4g069500 27.816 435 289 7 91 502 28 460 3.43e-51 181
MS.gene56211.t1 MTR_8g077890 29.124 491 303 12 28 496 24 491 1.47e-50 180
MS.gene56211.t1 MTR_7g446340 25.996 477 318 10 24 490 55 506 2.44e-50 180
MS.gene56211.t1 MTR_6g007340 25.996 477 318 10 24 490 55 506 2.44e-50 180
MS.gene56211.t1 MTR_4g072030 26.283 487 317 10 27 495 31 493 1.41e-48 175
MS.gene56211.t1 MTR_5g075300 27.530 494 315 10 18 490 14 485 2.76e-48 174
MS.gene56211.t1 MTR_2g013310 27.883 477 306 12 24 489 53 502 2.67e-47 172
MS.gene56211.t1 MTR_3g074330 53.459 159 66 2 1 152 1 158 6.10e-47 161
MS.gene56211.t1 MTR_3g074360 53.459 159 66 2 1 152 1 158 6.10e-47 161
MS.gene56211.t1 MTR_5g096000 52.023 173 64 1 11 183 10 163 7.24e-47 165
MS.gene56211.t1 MTR_5g096000 57.812 128 54 0 375 502 176 303 3.51e-41 150
MS.gene56211.t1 MTR_1g116660 26.569 478 320 11 20 490 32 485 9.46e-47 170
MS.gene56211.t1 MTR_2g013310 29.268 410 273 8 89 488 26 428 9.90e-47 169
MS.gene56211.t1 MTR_3g074310 52.830 159 67 2 1 152 1 158 3.65e-46 159
MS.gene56211.t1 MTR_1g116650 27.536 483 306 11 20 495 75 520 4.65e-46 169
MS.gene56211.t1 MTR_4g077740 28.661 478 298 10 24 484 46 497 1.33e-45 167
MS.gene56211.t1 MTR_7g005910 26.804 485 319 12 20 495 30 487 4.96e-45 165
MS.gene56211.t1 MTR_3g084110 26.141 482 317 11 20 490 25 478 5.02e-45 165
MS.gene56211.t1 MTR_4g118610 26.875 480 314 11 8 484 38 483 8.26e-40 150
MS.gene56211.t1 MTR_5g020270 27.521 476 299 11 23 488 50 489 1.97e-39 149
MS.gene56211.t1 MTR_6g018790 26.907 472 310 9 16 485 102 540 3.96e-39 150
MS.gene56211.t1 MTR_5g019870 26.889 450 295 11 65 490 43 482 9.30e-39 148
MS.gene56211.t1 MTR_7g082270 25.265 471 319 10 16 485 62 500 9.61e-39 148
MS.gene56211.t1 MTR_8g077310 26.638 473 299 11 23 484 47 482 3.48e-38 146
MS.gene56211.t1 MTR_5g020270 30.102 392 246 10 108 488 15 389 4.09e-38 144
MS.gene56211.t1 MTR_5g077580 24.870 579 303 15 20 500 23 567 4.70e-38 147
MS.gene56211.t1 MTR_0064s0040 48.299 147 64 1 6 152 7 141 5.08e-38 137
MS.gene56211.t1 MTR_8g077310 27.612 402 263 9 94 484 1 385 9.86e-37 140
MS.gene56211.t1 MTR_7g113970 26.316 494 309 11 8 484 37 492 2.13e-36 141
MS.gene56211.t1 MTR_8g077300 26.338 467 308 9 23 484 39 474 5.66e-36 140
MS.gene56211.t1 MTR_1g022315 25.887 479 315 10 18 488 43 489 8.20e-36 139
MS.gene56211.t1 MTR_2g020710 26.240 484 312 12 8 484 35 480 1.05e-35 139
MS.gene56211.t1 MTR_1g038620 43.312 157 71 2 204 360 50 188 1.39e-35 131
MS.gene56211.t1 MTR_1g022315 27.735 393 265 7 103 488 10 390 2.50e-35 136
MS.gene56211.t1 MTR_2g020710 27.518 407 271 9 85 484 2 391 5.17e-35 135
MS.gene56211.t1 MTR_7g113960 25.208 480 320 10 8 484 12 455 3.73e-34 134
MS.gene56211.t1 MTR_7g082270 26.139 417 276 9 16 432 62 446 7.40e-34 134
MS.gene56211.t1 MTR_4g069500 26.480 321 211 7 205 502 3 321 2.59e-33 129
MS.gene56211.t1 MTR_2g048720 31.268 339 203 9 20 351 23 338 9.75e-33 132
MS.gene56211.t1 MTR_5g020270 25.630 476 287 11 23 488 50 468 4.07e-32 129
MS.gene56211.t1 MTR_4g013205 26.316 399 266 8 95 484 90 469 1.21e-31 127
MS.gene56211.t1 MTR_7g094450 25.935 428 295 9 62 484 60 470 2.36e-31 126
MS.gene56211.t1 MTR_2g049020 30.233 344 207 9 20 353 23 343 3.25e-31 127
MS.gene56211.t1 MTR_2g026160 28.232 379 234 10 20 381 24 381 1.19e-30 125
MS.gene56211.t1 MTR_2g026160 32.075 106 71 1 387 491 455 560 4.37e-11 65.9
MS.gene56211.t1 MTR_1g114280 41.463 164 75 3 338 499 11 155 7.48e-30 115
MS.gene56211.t1 MTR_6g087910 24.490 392 284 6 94 484 103 483 3.96e-29 120
MS.gene56211.t1 MTR_3g080240 23.691 401 293 8 88 485 139 529 5.74e-29 120
MS.gene56211.t1 MTR_7g094110 26.812 414 264 13 85 484 84 472 7.58e-27 113
MS.gene56211.t1 MTR_4g064820 28.977 352 213 8 23 355 96 429 5.32e-26 111
MS.gene56211.t1 MTR_4g118610 25.854 410 267 11 8 414 38 413 4.14e-25 108
MS.gene56211.t1 MTR_8g077310 27.246 334 209 8 23 353 47 349 8.54e-25 106
MS.gene56211.t1 MTR_2g026140 27.778 360 215 12 29 377 30 355 1.85e-22 101
MS.gene56211.t1 MTR_2g020710 25.121 414 265 12 8 414 35 410 4.58e-22 99.0
MS.gene56211.t1 MTR_2g020710 25.182 413 264 12 8 413 35 409 8.61e-22 98.2
MS.gene56211.t1 MTR_2g020710 26.211 351 216 11 8 351 35 349 1.63e-20 93.6
MS.gene56211.t1 MTR_7g113970 25.833 360 220 9 8 353 37 363 2.28e-20 94.0
MS.gene56211.t1 MTR_7g113960 24.286 350 228 8 8 353 12 328 1.91e-19 90.9
MS.gene56211.t1 MTR_7g094110 24.691 405 264 10 85 484 84 452 8.24e-19 89.4
MS.gene56211.t1 MTR_5g024740 27.386 241 152 6 23 261 4 223 7.84e-17 84.0
MS.gene56211.t1 MTR_3g118530 30.058 173 118 3 91 262 54 224 1.75e-15 79.7
MS.gene56211.t1 MTR_3g116060 30.412 194 128 4 74 262 31 222 1.76e-15 79.7
MS.gene56211.t1 MTR_3g118530 30.058 173 118 3 91 262 54 224 4.27e-15 78.6
MS.gene56211.t1 MTR_5g044910 26.590 173 124 3 90 261 53 223 2.42e-14 76.3
MS.gene56211.t1 MTR_8g073100 26.540 211 145 4 78 280 41 249 6.03e-14 75.1
MS.gene56211.t1 MTR_8g073100 28.571 224 142 5 270 481 482 699 1.83e-11 67.0
MS.gene56211.t1 MTR_1g093115 53.968 63 28 1 161 222 1 63 1.30e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56211.t1 AT5G61520 61.837 490 178 4 17 500 18 504 0.0 614
MS.gene56211.t1 AT5G26340 58.704 494 200 4 9 499 9 501 0.0 608
MS.gene56211.t1 AT4G02050 57.938 485 201 3 15 499 19 500 0.0 602
MS.gene56211.t1 AT4G02050 57.938 485 201 3 15 499 19 500 0.0 602
MS.gene56211.t1 AT3G19930 60.612 490 189 3 13 500 13 500 0.0 599
MS.gene56211.t1 AT3G19930 60.612 490 189 3 13 500 13 500 0.0 599
MS.gene56211.t1 AT1G11260 58.384 495 202 2 8 499 8 501 0.0 597
MS.gene56211.t1 AT3G19940 58.571 490 198 4 19 505 21 508 0.0 596
MS.gene56211.t1 AT5G23270 59.298 484 193 3 15 495 16 498 0.0 584
MS.gene56211.t1 AT1G50310 57.526 485 201 4 19 500 21 503 0.0 582
MS.gene56211.t1 AT5G61520 61.572 458 167 4 49 500 2 456 0.0 569
MS.gene56211.t1 AT4G21480 57.256 503 209 3 1 500 1 500 0.0 565
MS.gene56211.t1 AT1G34580 52.361 487 221 6 16 495 17 499 0.0 530
MS.gene56211.t1 AT1G77210 50.920 489 237 3 15 502 18 504 0.0 522
MS.gene56211.t1 AT1G77210 50.920 489 237 3 15 502 18 504 0.0 522
MS.gene56211.t1 AT5G26250 48.622 508 254 6 1 507 1 502 1.20e-171 494
MS.gene56211.t1 AT1G34580 51.435 453 209 6 50 495 1 449 9.50e-168 482
MS.gene56211.t1 AT1G07340 50.996 502 239 6 1 499 1 498 1.96e-165 478
MS.gene56211.t1 AT3G05960 47.228 487 253 4 10 495 8 491 3.86e-164 475
MS.gene56211.t1 AT1G50310 56.534 352 148 4 152 500 11 360 8.47e-145 421
MS.gene56211.t1 AT1G77210 50.284 352 172 3 152 502 6 355 8.98e-126 371
MS.gene56211.t1 AT4G36670 30.237 506 295 15 25 505 18 490 2.40e-57 198
MS.gene56211.t1 AT2G18480 29.053 475 286 12 37 487 36 483 7.47e-55 192
MS.gene56211.t1 AT3G18830 28.515 505 314 12 27 509 40 519 9.04e-55 192
MS.gene56211.t1 AT2G16120 28.893 488 308 8 27 495 30 497 4.91e-54 190
MS.gene56211.t1 AT2G16130 28.657 499 317 8 16 495 19 497 7.34e-54 189
MS.gene56211.t1 AT3G05165 26.793 474 306 11 16 484 23 460 5.15e-44 162
MS.gene56211.t1 AT3G05165 26.793 474 306 11 16 484 23 460 5.15e-44 162
MS.gene56211.t1 AT3G05165 26.793 474 306 11 16 484 23 460 5.15e-44 162
MS.gene56211.t1 AT5G27360 25.620 484 319 8 6 484 18 465 2.37e-43 160
MS.gene56211.t1 AT5G27360 25.620 484 319 8 6 484 66 513 8.73e-43 159
MS.gene56211.t1 AT5G27350 26.971 482 315 11 6 484 14 461 1.43e-42 158
MS.gene56211.t1 AT5G17010 28.866 485 288 13 24 484 48 499 2.87e-42 158
MS.gene56211.t1 AT5G17010 28.866 485 288 13 24 484 48 499 2.87e-42 158
MS.gene56211.t1 AT5G17010 28.866 485 288 13 24 484 48 499 2.87e-42 158
MS.gene56211.t1 AT2G43330 25.367 477 318 9 27 492 35 484 8.38e-41 154
MS.gene56211.t1 AT2G20780 25.474 475 323 11 16 484 48 497 1.90e-40 153
MS.gene56211.t1 AT1G08900 26.601 406 275 8 85 484 25 413 1.31e-39 149
MS.gene56211.t1 AT1G08890 25.615 488 322 12 4 485 6 458 1.88e-39 149
MS.gene56211.t1 AT1G08900 26.601 406 275 8 85 484 67 455 1.92e-39 149
MS.gene56211.t1 AT1G08900 26.601 406 275 8 85 484 67 455 1.92e-39 149
MS.gene56211.t1 AT1G08900 26.601 406 275 8 85 484 59 447 2.13e-39 149
MS.gene56211.t1 AT5G27360 27.778 360 239 5 130 484 18 361 2.44e-39 147
MS.gene56211.t1 AT5G27360 27.778 360 239 5 130 484 18 361 2.44e-39 147
MS.gene56211.t1 AT3G05150 26.186 485 316 10 6 484 18 466 2.69e-39 149
MS.gene56211.t1 AT3G05150 26.186 485 316 10 6 484 18 466 2.69e-39 149
MS.gene56211.t1 AT3G05150 26.186 485 316 10 6 484 18 466 2.83e-39 149
MS.gene56211.t1 AT1G08930 25.684 475 306 11 18 484 53 488 6.75e-39 148
MS.gene56211.t1 AT1G08930 25.684 475 306 11 18 484 53 488 6.75e-39 148
MS.gene56211.t1 AT1G75220 26.834 477 312 11 18 488 42 487 1.15e-38 147
MS.gene56211.t1 AT2G20780 26.340 429 299 10 66 488 26 443 1.66e-38 147
MS.gene56211.t1 AT3G05160 25.424 472 315 10 16 484 14 451 1.89e-38 146
MS.gene56211.t1 AT5G59250 27.536 483 302 10 23 484 98 553 3.16e-38 147
MS.gene56211.t1 AT3G03090 27.848 474 293 11 31 484 55 499 3.85e-38 146
MS.gene56211.t1 AT5G16150 24.896 482 324 11 6 484 93 539 5.68e-38 146
MS.gene56211.t1 AT5G16150 24.896 482 324 11 6 484 93 539 5.68e-38 146
MS.gene56211.t1 AT5G16150 24.896 482 324 11 6 484 93 539 5.68e-38 146
MS.gene56211.t1 AT3G05160 26.485 404 282 7 83 484 12 402 6.00e-38 144
MS.gene56211.t1 AT3G05160 26.485 404 282 7 83 484 12 402 6.00e-38 144
MS.gene56211.t1 AT5G18840 27.347 490 308 14 10 490 31 481 8.23e-38 145
MS.gene56211.t1 AT3G05155 25.210 476 319 11 12 485 16 456 1.75e-37 144
MS.gene56211.t1 AT3G05165 26.174 447 289 11 16 457 23 433 4.50e-37 143
MS.gene56211.t1 AT3G05400 25.367 477 317 12 12 484 15 456 8.24e-37 142
MS.gene56211.t1 AT1G54730 26.767 467 289 9 29 484 38 462 9.86e-37 142
MS.gene56211.t1 AT3G05165 26.747 415 265 10 16 426 23 402 2.61e-36 140
MS.gene56211.t1 AT3G05165 26.747 415 265 10 16 426 23 402 2.61e-36 140
MS.gene56211.t1 AT2G48020 26.423 492 317 10 2 486 7 460 4.95e-36 140
MS.gene56211.t1 AT2G48020 26.423 492 317 10 2 486 7 460 4.95e-36 140
MS.gene56211.t1 AT1G19450 27.975 479 304 13 18 488 43 488 2.09e-35 138
MS.gene56211.t1 AT3G05400 24.738 477 300 13 12 484 15 436 3.20e-34 134
MS.gene56211.t1 AT4G04750 26.458 480 313 13 16 490 30 474 5.35e-32 129
MS.gene56211.t1 AT4G04750 26.458 480 313 13 16 490 30 474 5.35e-32 129
MS.gene56211.t1 AT4G04750 26.829 410 283 9 85 490 122 518 5.63e-32 129
MS.gene56211.t1 AT1G08900 25.824 364 247 8 85 442 67 413 1.77e-31 126
MS.gene56211.t1 AT1G54730 26.588 425 259 9 29 442 38 420 3.18e-31 125
MS.gene56211.t1 AT1G05030 25.108 462 308 12 29 484 85 514 4.73e-31 126
MS.gene56211.t1 AT4G04760 25.157 477 309 11 24 490 32 470 5.62e-31 125
MS.gene56211.t1 AT1G30220 27.778 342 218 8 20 353 25 345 8.08e-31 126
MS.gene56211.t1 AT1G30220 33.051 118 74 2 383 495 451 568 9.60e-11 64.7
MS.gene56211.t1 AT1G05030 25.304 411 290 9 79 484 64 462 1.13e-30 124
MS.gene56211.t1 AT4G04760 25.542 415 283 8 85 490 14 411 1.78e-30 123
MS.gene56211.t1 AT1G54730 25.482 467 274 10 29 484 38 441 2.41e-30 123
MS.gene56211.t1 AT1G08920 22.410 473 324 9 18 484 27 462 6.35e-30 122
MS.gene56211.t1 AT1G67300 24.755 408 264 8 95 484 105 487 8.24e-30 122
MS.gene56211.t1 AT1G67300 24.510 408 264 8 95 484 105 486 1.62e-29 121
MS.gene56211.t1 AT1G67300 24.510 408 264 8 95 484 105 486 1.62e-29 121
MS.gene56211.t1 AT1G08920 22.917 480 320 11 18 484 27 469 2.63e-29 120
MS.gene56211.t1 AT5G27360 24.048 420 278 8 6 420 18 401 4.40e-29 119
MS.gene56211.t1 AT4G04760 25.364 481 298 13 24 489 32 466 5.80e-29 120
MS.gene56211.t1 AT2G35740 28.205 351 217 10 21 360 24 350 2.52e-28 119
MS.gene56211.t1 AT2G35740 31.532 111 75 1 382 491 453 563 2.02e-11 67.0
MS.gene56211.t1 AT4G16480 28.732 355 212 10 20 360 24 351 2.64e-28 119
MS.gene56211.t1 AT4G16480 27.083 144 96 3 352 486 416 559 3.91e-11 65.9
MS.gene56211.t1 AT4G16480 28.732 355 212 10 20 360 24 351 2.64e-28 119
MS.gene56211.t1 AT4G16480 27.083 144 96 3 352 486 416 559 3.91e-11 65.9
MS.gene56211.t1 AT4G16480 28.732 355 212 10 20 360 24 351 2.64e-28 119
MS.gene56211.t1 AT4G16480 27.083 144 96 3 352 486 416 559 3.91e-11 65.9
MS.gene56211.t1 AT1G67300 24.719 356 225 7 95 433 105 434 3.15e-28 117
MS.gene56211.t1 AT1G67300 24.719 356 225 7 95 433 105 434 3.15e-28 117
MS.gene56211.t1 AT1G67300 25.000 348 218 7 95 425 105 426 1.50e-27 115
MS.gene56211.t1 AT1G67300 25.000 348 218 7 95 425 105 426 1.50e-27 115
MS.gene56211.t1 AT1G79820 25.616 406 260 15 95 484 108 487 2.01e-25 109
MS.gene56211.t1 AT1G79820 25.616 406 260 15 95 484 108 487 2.01e-25 109
MS.gene56211.t1 AT1G54730 25.176 425 244 10 29 442 38 399 4.99e-25 107
MS.gene56211.t1 AT1G08920 21.609 435 298 9 18 446 27 424 1.13e-24 107
MS.gene56211.t1 AT3G05155 24.419 344 224 10 12 353 16 325 3.87e-24 103
MS.gene56211.t1 AT1G54730 26.065 399 238 10 29 414 38 392 5.32e-24 104
MS.gene56211.t1 AT1G54730 26.065 399 238 10 29 414 38 392 5.32e-24 104
MS.gene56211.t1 AT5G17010 24.283 523 255 17 7 484 10 436 6.30e-22 98.6
MS.gene56211.t1 AT1G79820 24.566 346 236 11 95 433 108 435 6.56e-21 95.9
MS.gene56211.t1 AT3G20460 22.469 405 293 8 85 484 95 483 1.20e-20 95.1
MS.gene56211.t1 AT1G54730 26.786 336 195 8 29 353 38 333 1.86e-20 93.2
MS.gene56211.t1 AT2G48020 25.606 371 237 9 2 368 7 342 4.84e-19 89.0
MS.gene56211.t1 AT2G48020 25.600 375 237 10 2 372 7 343 1.67e-18 87.8
MS.gene56211.t1 AT1G54730 24.561 399 223 11 29 414 38 371 4.04e-18 86.7
MS.gene56211.t1 AT3G51490 26.556 241 156 7 23 262 4 224 1.29e-17 86.7
MS.gene56211.t1 AT3G51490 26.271 236 152 7 261 481 486 714 5.33e-12 68.9
MS.gene56211.t1 AT3G51490 26.556 241 156 7 23 262 4 224 1.35e-17 86.7
MS.gene56211.t1 AT1G54730 25.559 313 185 7 29 330 38 313 2.93e-17 83.2
MS.gene56211.t1 AT1G54730 25.559 313 185 7 29 330 38 313 2.93e-17 83.2
MS.gene56211.t1 AT3G51490 29.480 173 119 3 91 262 4 174 8.36e-17 84.0
MS.gene56211.t1 AT3G51490 26.271 236 152 7 261 481 436 664 6.25e-12 68.6
MS.gene56211.t1 AT1G79820 22.333 403 229 12 95 484 108 439 7.36e-16 80.5
MS.gene56211.t1 AT1G20840 30.435 161 109 3 103 262 64 222 2.47e-14 76.3
MS.gene56211.t1 AT1G20840 30.435 161 109 3 103 262 64 222 2.47e-14 76.3
MS.gene56211.t1 AT4G35300 30.058 173 118 3 91 262 54 224 9.01e-13 71.2
MS.gene56211.t1 AT4G35300 30.058 173 118 3 91 262 54 224 9.01e-13 71.2
MS.gene56211.t1 AT4G35300 30.058 173 118 3 91 262 54 224 9.01e-13 71.2
MS.gene56211.t1 AT4G35300 30.058 173 118 3 91 262 54 224 9.01e-13 71.2
MS.gene56211.t1 AT4G35300 30.058 173 118 3 91 262 54 224 9.01e-13 71.2
MS.gene56211.t1 AT4G35300 30.058 173 118 3 91 262 54 224 9.01e-13 71.2
MS.gene56211.t1 AT4G35300 30.058 173 118 3 91 262 54 224 9.01e-13 71.2
MS.gene56211.t1 AT4G35300 30.058 173 118 3 91 262 54 224 9.67e-13 71.2
MS.gene56211.t1 AT4G35300 30.058 173 118 3 91 262 54 224 9.67e-13 71.2
MS.gene56211.t1 AT4G35300 30.058 173 118 3 91 262 54 224 9.67e-13 71.2

Find 90 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATGCTGTTTGGTGTTTC+TGG 0.080373 3.3:-4004831 None:intergenic
ATTGGAACATTCTTGGTTTC+TGG 0.128771 3.3:-4005581 None:intergenic
CTTTGTAAGATGTTCTTAAA+TGG 0.219318 3.3:-4004978 None:intergenic
AACATCATGTGTCCCTCTTA+TGG 0.226396 3.3:-4004898 None:intergenic
GGTTATGATATAGGAATTTC+AGG 0.255337 3.3:+4002660 MS.gene56211:CDS
ATACTTGGTCGTGTTCTTCT+TGG 0.258509 3.3:+4003823 MS.gene56211:CDS
AAATAGGATTGGAGCATAAA+AGG 0.275402 3.3:-4005075 None:intergenic
ATTATCTTTGGTTATGATAT+AGG 0.280249 3.3:+4002651 MS.gene56211:CDS
TTCTTCTCACAAATTCTTAT+AGG 0.280430 3.3:+4005242 MS.gene56211:CDS
TGGAATTGGCTTTGCTAATC+AGG 0.280534 3.3:+4003849 MS.gene56211:CDS
GCCACTGGAGGCATTATCTT+TGG 0.284215 3.3:+4002639 MS.gene56211:CDS
GGTGGTGCTGCATTCCTTAT+TGG 0.287192 3.3:+4003760 MS.gene56211:CDS
TTGCTCAATTGGAACATTCT+TGG 0.300336 3.3:-4005588 None:intergenic
ATGTTATGTCATTTCAAGTA+TGG 0.305249 3.3:+4005497 MS.gene56211:CDS
ACCCTATCCATTTGCTCAAT+TGG 0.305882 3.3:-4005599 None:intergenic
GCCATTTCTGATAGATATAA+TGG 0.314723 3.3:-4004627 None:intergenic
CTTGTTGTCTTGTTTCATCT+TGG 0.317999 3.3:-4003602 None:intergenic
ACATGATACTTGCTTCAATA+AGG 0.321693 3.3:-4004938 None:intergenic
GTTCTTCTTGGAGTTGGAAT+TGG 0.324453 3.3:+4003835 MS.gene56211:CDS
TATTGTGATTCTCTCTTGTA+TGG 0.347026 3.3:+4002611 MS.gene56211:CDS
TCTTGTATGGTGGCTGCCAC+TGG 0.347170 3.3:+4002624 MS.gene56211:CDS
AAGCAAAGAAAGATGCTAAA+AGG 0.350210 3.3:-4003693 None:intergenic
TTGATTGCTCCTCTATATCT+TGG 0.355418 3.3:-4004654 None:intergenic
CATTGATTCCTGTGAATTGT+TGG 0.356994 3.3:-4005046 None:intergenic
TTCATCTTGGTGTATACATC+TGG 0.359272 3.3:-4003589 None:intergenic
TTGATATGCATTTATGTTGC+CGG 0.361579 3.3:+4005335 MS.gene56211:CDS
CACCAAGAGCTGCTCCAATA+AGG 0.370888 3.3:-4003774 None:intergenic
TTATGCTGTTTGGTGTTTCT+GGG 0.371737 3.3:-4004830 None:intergenic
CCTCTTCTATTGCTTGCAAT+TGG 0.376138 3.3:-4002567 None:intergenic
TTCCAGCTTTGTGTTGGAAT+TGG 0.376617 3.3:+4004684 MS.gene56211:CDS
CCAGCTACAATCCTCACTTT+AGG 0.378444 3.3:+4004795 MS.gene56211:CDS
TTCCTTATTGGAGCAGCTCT+TGG 0.384601 3.3:+4003772 MS.gene56211:CDS
TTGAGCAAATGGATAGGGTT+TGG 0.386241 3.3:+4005603 MS.gene56211:CDS
ATATAGACCTCAACTTGTTA+TGG 0.392956 3.3:+4005004 MS.gene56211:CDS
TTGCCGGATTTGCTTGGTCA+TGG 0.394117 3.3:+4005351 MS.gene56211:CDS
GCACCACCTACAAGAATTGA+TGG 0.406112 3.3:-4003745 None:intergenic
TGCCGGATTTGCTTGGTCAT+GGG 0.407730 3.3:+4005352 MS.gene56211:CDS
TCAGCAAATTTAATCAACTT+TGG 0.416918 3.3:+4004714 MS.gene56211:CDS
GAATGTTCCAATTGAGCAAA+TGG 0.420157 3.3:+4005592 MS.gene56211:CDS
AGAAAAGATCAAAGACGGTT+GGG 0.422002 3.3:+4004740 MS.gene56211:CDS
GCAGTTATGGTAGGGATTGT+AGG 0.422925 3.3:+4005137 MS.gene56211:CDS
TCATCAATCACAAGAGCCTT+TGG 0.425277 3.3:+4003715 MS.gene56211:CDS
GGTCGTGTTCTTCTTGGAGT+TGG 0.425536 3.3:+4003829 MS.gene56211:CDS
TCCATTATATCTATCAGAAA+TGG 0.433354 3.3:+4004626 MS.gene56211:CDS
AATTCTTATAGGAAGTATAA+TGG 0.443835 3.3:+4005253 MS.gene56211:CDS
CTTATTGGAGCAGCTCTTGG+TGG 0.464561 3.3:+4003775 MS.gene56211:CDS
CTAGGAACCAACCATCCTAA+TGG 0.475289 3.3:-4005377 None:intergenic
TTAATGCTGCAATCCATAAG+AGG 0.481457 3.3:+4004885 MS.gene56211:CDS
CACCAATTCCAACACAAAGC+TGG 0.486028 3.3:-4004686 None:intergenic
GCCGGATTTGCTTGGTCATG+GGG 0.494733 3.3:+4005353 MS.gene56211:CDS
TGATGTTCAACAAGAATTTG+AGG 0.494949 3.3:+4004914 MS.gene56211:CDS
TCCAATTGAGCAAATGGATA+GGG 0.497217 3.3:+4005598 MS.gene56211:CDS
ATTGTTGGAGACAAGATTGA+AGG 0.501127 3.3:+4005650 MS.gene56211:CDS
TGCAGGTGGTGTAACATCAA+TGG 0.504221 3.3:+4003543 MS.gene56211:intron
ATACAAGAGAGAATCACAAT+AGG 0.504849 3.3:-4002609 None:intergenic
GTGATGAAGTGAATGTTGTT+AGG 0.505701 3.3:-4003657 None:intergenic
ATTGGCTTCCAGCTTTGTGT+TGG 0.514675 3.3:+4004678 MS.gene56211:CDS
AGTATAATGGCAGCACAACT+TGG 0.520104 3.3:+4005266 MS.gene56211:CDS
ACTTCATCACTATATATAGC+TGG 0.520261 3.3:+4003670 MS.gene56211:CDS
ATGGCACTTCCAAGATATAG+AGG 0.524996 3.3:+4004645 MS.gene56211:CDS
AATATATACATGCTAATACT+TGG 0.530434 3.3:+4003808 MS.gene56211:CDS
GCAGCACAACTTGGTGATCA+TGG 0.536187 3.3:+4005275 MS.gene56211:CDS
CCTAAAGTGAGGATTGTAGC+TGG 0.537334 3.3:-4004795 None:intergenic
CAGAAAAGATCAAAGACGGT+TGG 0.543560 3.3:+4004739 MS.gene56211:CDS
CGCAAACCATCAATTCTTGT+AGG 0.548548 3.3:+4003739 MS.gene56211:CDS
TGTAGCTGGAACTGCTGCCA+TGG 0.558668 3.3:-4004781 None:intergenic
AATTGATGGTTTGCGACCAA+AGG 0.563264 3.3:-4003731 None:intergenic
GAAAAGATCAAAGACGGTTG+GGG 0.563993 3.3:+4004741 MS.gene56211:CDS
TTTATGTTGCCGGATTTGCT+TGG 0.566712 3.3:+4005345 MS.gene56211:CDS
AAGTGAATGTTGTTAGGAGT+TGG 0.571646 3.3:-4003651 None:intergenic
TGTGATTCTCTCTTGTATGG+TGG 0.579802 3.3:+4002614 MS.gene56211:CDS
TTCCAATTGAGCAAATGGAT+AGG 0.581303 3.3:+4005597 MS.gene56211:CDS
AGCAATAGAAGAGGATACAA+TGG 0.586289 3.3:+4002576 MS.gene56211:CDS
TGCAACTGTAATACTTTGCG+CGG 0.587190 3.3:-4005429 None:intergenic
AGATCAAAGACGGTTGGGGA+TGG 0.591219 3.3:+4004745 MS.gene56211:CDS
TGTATGGTGGCTGCCACTGG+AGG 0.591273 3.3:+4002627 MS.gene56211:CDS
GGTACAGAAAAGATCAAAGA+CGG 0.591721 3.3:+4004735 MS.gene56211:CDS
AGCACTTTCACCTAATCCAA+TGG 0.595224 3.3:-4005102 None:intergenic
TAATGCTGCAATCCATAAGA+GGG 0.599903 3.3:+4004886 MS.gene56211:CDS
GCTATTGCCATAACAAGTTG+AGG 0.605625 3.3:-4005011 None:intergenic
TATAGAGGAGCAATCAACAT+TGG 0.606491 3.3:+4004660 MS.gene56211:CDS
CCAATTGCAAGCAATAGAAG+AGG 0.607612 3.3:+4002567 MS.gene56211:CDS
ATGCTTATAGTCGATAAACT+AGG 0.611635 3.3:+4005182 MS.gene56211:CDS
CCGGATTTGCTTGGTCATGG+GGG 0.615253 3.3:+4005354 MS.gene56211:CDS
ATGGCGAATTTCTCTAGCCA+TGG 0.615608 3.3:+4004764 MS.gene56211:CDS
AAACCATCAATTCTTGTAGG+TGG 0.619483 3.3:+4003742 MS.gene56211:CDS
GCGGCTGATCTAATCTCCAA+TGG 0.626357 3.3:-4005410 None:intergenic
ACCAAAGATAATGCCTCCAG+TGG 0.655294 3.3:-4002640 None:intergenic
TGCTGTTTGGTGTTTCTGGG+AGG 0.658455 3.3:-4004827 None:intergenic
GATTGAAGGCAAACACACTG+TGG 0.740057 3.3:+4005664 MS.gene56211:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATGTAAGTTAATATA+TGG + chr3.3:4003974-4003993 MS.gene56211:intron 10.0%
!! TATCTATAATAACTATATAA+GGG - chr3.3:4002991-4003010 None:intergenic 10.0%
!! ACATTAAAATAAACTTTAGA+TGG + chr3.3:4004573-4004592 MS.gene56211:intron 15.0%
!! GTATCTATAATAACTATATA+AGG - chr3.3:4002992-4003011 None:intergenic 15.0%
!! GTGATATAATGTTAAAATTT+GGG + chr3.3:4004355-4004374 MS.gene56211:intron 15.0%
!! TGAATTTATGAAAATTAAGT+GGG - chr3.3:4004224-4004243 None:intergenic 15.0%
!! TGTGATATAATGTTAAAATT+TGG + chr3.3:4004354-4004373 MS.gene56211:intron 15.0%
!! TTGAATTTATGAAAATTAAG+TGG - chr3.3:4004225-4004244 None:intergenic 15.0%
!!! AAATTTTAACATTATATCAC+AGG - chr3.3:4004355-4004374 None:intergenic 15.0%
!!! AATGAATATTTTTATCTAGT+CGG + chr3.3:4004068-4004087 MS.gene56211:intron 15.0%
!!! ATCTACAGTTTTTTTTTTAT+AGG - chr3.3:4003152-4003171 None:intergenic 15.0%
!!! ATTTAAAGATTATTTGGTTT+TGG - chr3.3:4003325-4003344 None:intergenic 15.0%
!!! GACTTCAAATTTAAAATTTA+AGG - chr3.3:4003294-4003313 None:intergenic 15.0%
!!! TTTTTTTGGAAAAAAATTGT+TGG + chr3.3:4005635-4005654 MS.gene56211:CDS 15.0%
!! AAAATTCGTTGAAATTACAT+GGG + chr3.3:4003259-4003278 MS.gene56211:intron 20.0%
!! AATATATACATGCTAATACT+TGG + chr3.3:4003808-4003827 MS.gene56211:CDS 20.0%
!! ACTATACAAAATAGATGATA+TGG + chr3.3:4003222-4003241 MS.gene56211:intron 20.0%
!! ATATAAGGGATCAAAAATAT+TGG - chr3.3:4002977-4002996 None:intergenic 20.0%
!! ATTATCTTTGGTTATGATAT+AGG + chr3.3:4002651-4002670 MS.gene56211:CDS 20.0%
!! CAAAAAGAGAAAAAAATTGA+AGG - chr3.3:4003525-4003544 None:intergenic 20.0%
!! CACTAAAATTTCTAAATATG+TGG - chr3.3:4003945-4003964 None:intergenic 20.0%
!! CATTATTGTTCTTAAAAACA+TGG - chr3.3:4003894-4003913 None:intergenic 20.0%
!! CTCGTAATTTAAAGATTATT+TGG - chr3.3:4003331-4003350 None:intergenic 20.0%
!! TATAATAGATGTAGTAAGAT+AGG + chr3.3:4004130-4004149 MS.gene56211:intron 20.0%
!! TATTAAGCTCTTTAATTCAT+TGG + chr3.3:4004528-4004547 MS.gene56211:intron 20.0%
!!! AAATCCAAAGTTTTTTTACA+TGG + chr3.3:4003355-4003374 MS.gene56211:intron 20.0%
!!! AATCCAAAGTTTTTTTACAT+GGG + chr3.3:4003356-4003375 MS.gene56211:intron 20.0%
!!! AATTCTTATAGGAAGTATAA+TGG + chr3.3:4005253-4005272 MS.gene56211:CDS 20.0%
!!! CTTAAATCTTTATTTGATTG+TGG - chr3.3:4002761-4002780 None:intergenic 20.0%
! AAAATAGATGATATGGTATG+AGG + chr3.3:4003229-4003248 MS.gene56211:intron 25.0%
! AAATAGATGATATGGTATGA+GGG + chr3.3:4003230-4003249 MS.gene56211:intron 25.0%
! AAATTCGTTGAAATTACATG+GGG + chr3.3:4003260-4003279 MS.gene56211:intron 25.0%
! AAGATTGTTATCGCAAAAAA+TGG - chr3.3:4003043-4003062 None:intergenic 25.0%
! ATAATGAGAAAGAGAGATAA+TGG + chr3.3:4003908-4003927 MS.gene56211:intron 25.0%
! ATTAAAAAGTGAAGTGTGTT+AGG - chr3.3:4004103-4004122 None:intergenic 25.0%
! CAAAATTCGTTGAAATTACA+TGG + chr3.3:4003258-4003277 MS.gene56211:intron 25.0%
! CTAATCCAATGGTTAAAAAT+AGG - chr3.3:4005094-4005113 None:intergenic 25.0%
! CTTTGTAAGATGTTCTTAAA+TGG - chr3.3:4004981-4005000 None:intergenic 25.0%
! GAAAAGATAATGAAGTTGAA+TGG - chr3.3:4002697-4002716 None:intergenic 25.0%
! GTTCTTAAAAACATGGTAAT+TGG - chr3.3:4003887-4003906 None:intergenic 25.0%
! TATCCCATGTAAAAAAACTT+TGG - chr3.3:4003362-4003381 None:intergenic 25.0%
! TCAGCAAATTTAATCAACTT+TGG + chr3.3:4004714-4004733 MS.gene56211:CDS 25.0%
! TCCATTATATCTATCAGAAA+TGG + chr3.3:4004626-4004645 MS.gene56211:CDS 25.0%
! TTCTTCTCACAAATTCTTAT+AGG + chr3.3:4005242-4005261 MS.gene56211:CDS 25.0%
!! ACACTTATAAACTCATTTTC+AGG + chr3.3:4004429-4004448 MS.gene56211:intron 25.0%
!! ATGTTATGTCATTTCAAGTA+TGG + chr3.3:4005497-4005516 MS.gene56211:CDS 25.0%
!! CATGTAATTTCAACGAATTT+TGG - chr3.3:4003260-4003279 None:intergenic 25.0%
!!! AAAAGTTTCTTTTTTTCTGC+AGG + chr3.3:4004599-4004618 MS.gene56211:intron 25.0%
!!! CAATTTTTTTCTCTTTTTGC+AGG + chr3.3:4003526-4003545 MS.gene56211:intron 25.0%
!!! CTATTTTTAACCATTGGATT+AGG + chr3.3:4005092-4005111 MS.gene56211:CDS 25.0%
!!! TATGGAACTTTCTTCTTTTT+TGG + chr3.3:4005515-4005534 MS.gene56211:CDS 25.0%
!!! TTTGGAGAGAACATTTTTTT+TGG + chr3.3:4005621-4005640 MS.gene56211:CDS 25.0%
AAATAGGATTGGAGCATAAA+AGG - chr3.3:4005078-4005097 None:intergenic 30.0%
AAGCAAAGAAAGATGCTAAA+AGG - chr3.3:4003696-4003715 None:intergenic 30.0%
ACATGATACTTGCTTCAATA+AGG - chr3.3:4004941-4004960 None:intergenic 30.0%
ACTTCATCACTATATATAGC+TGG + chr3.3:4003670-4003689 MS.gene56211:CDS 30.0%
AGCTCTTTAATTCATTGGAT+TGG + chr3.3:4004533-4004552 MS.gene56211:intron 30.0%
ATACAAGAGAGAATCACAAT+AGG - chr3.3:4002612-4002631 None:intergenic 30.0%
ATGCTTATAGTCGATAAACT+AGG + chr3.3:4005182-4005201 MS.gene56211:CDS 30.0%
CCAATGGTTAAAAATAGGAT+TGG - chr3.3:4005089-4005108 None:intergenic 30.0%
GACGATTAGAAGCTAAAAAT+TGG - chr3.3:4004466-4004485 None:intergenic 30.0%
GCCATTTCTGATAGATATAA+TGG - chr3.3:4004630-4004649 None:intergenic 30.0%
GGAAAAAACTTCTCCAAAAA+TGG - chr3.3:4003571-4003590 None:intergenic 30.0%
GGTTATGATATAGGAATTTC+AGG + chr3.3:4002660-4002679 MS.gene56211:CDS 30.0%
TAAATCAAAACTTGCCCAAA+TGG + chr3.3:4003380-4003399 MS.gene56211:intron 30.0%
TATTATCTGGAAGAGTTTCA+AGG + chr3.3:4004033-4004052 MS.gene56211:intron 30.0%
TATTGTGATTCTCTCTTGTA+TGG + chr3.3:4002611-4002630 MS.gene56211:CDS 30.0%
TGATGTTCAACAAGAATTTG+AGG + chr3.3:4004914-4004933 MS.gene56211:CDS 30.0%
TTGATATGCATTTATGTTGC+CGG + chr3.3:4005335-4005354 MS.gene56211:CDS 30.0%
! TGGATTGGATACTATTATCT+TGG + chr3.3:4004548-4004567 MS.gene56211:intron 30.0%
! TTTTATCTGCAGTTATGGTA+GGG + chr3.3:4005129-4005148 MS.gene56211:CDS 30.0%
!! ATATAGACCTCAACTTGTTA+TGG + chr3.3:4005004-4005023 MS.gene56211:CDS 30.0%
!! GCATTAACTTAGCTTTTTGA+TGG - chr3.3:4004872-4004891 None:intergenic 30.0%
!! TTCACTTTTATCTGCAGTTA+TGG + chr3.3:4005124-4005143 MS.gene56211:CDS 30.0%
!!! CCAATCCTATTTTTAACCAT+TGG + chr3.3:4005086-4005105 MS.gene56211:CDS 30.0%
!!! TTTCTTCTTTTTTGGAGGTT+GGG + chr3.3:4005523-4005542 MS.gene56211:CDS 30.0%
!!! TTTGATGGTTTTTGCTGTTT+TGG - chr3.3:4004857-4004876 None:intergenic 30.0%
!!! TTTTTTTCTCTTTTTGCAGG+TGG + chr3.3:4003529-4003548 MS.gene56211:intron 30.0%
AAACCATCAATTCTTGTAGG+TGG + chr3.3:4003742-4003761 MS.gene56211:CDS 35.0%
AAGTGAATGTTGTTAGGAGT+TGG - chr3.3:4003654-4003673 None:intergenic 35.0%
AGAAAAGATCAAAGACGGTT+GGG + chr3.3:4004740-4004759 MS.gene56211:CDS 35.0%
AGCAATAGAAGAGGATACAA+TGG + chr3.3:4002576-4002595 MS.gene56211:CDS 35.0%
ATTGGAACATTCTTGGTTTC+TGG - chr3.3:4005584-4005603 None:intergenic 35.0%
ATTGTTGGAGACAAGATTGA+AGG + chr3.3:4005650-4005669 MS.gene56211:CDS 35.0%
CCTGTGAATTGTTGGAAAAA+AGG - chr3.3:4005041-4005060 None:intergenic 35.0%
GAATGTTCCAATTGAGCAAA+TGG + chr3.3:4005592-4005611 MS.gene56211:CDS 35.0%
GGTACAGAAAAGATCAAAGA+CGG + chr3.3:4004735-4004754 MS.gene56211:CDS 35.0%
GTCAGTGTAAAACATGTCTA+TGG + chr3.3:4004491-4004510 MS.gene56211:intron 35.0%
GTCTTTACATCACTGTCATT+TGG + chr3.3:4003107-4003126 MS.gene56211:intron 35.0%
GTGATGAAGTGAATGTTGTT+AGG - chr3.3:4003660-4003679 None:intergenic 35.0%
TAATGCTGCAATCCATAAGA+GGG + chr3.3:4004886-4004905 MS.gene56211:CDS 35.0%
TATAGAGGAGCAATCAACAT+TGG + chr3.3:4004660-4004679 MS.gene56211:CDS 35.0%
TCCAATGGAAAAATCTCACT+AGG - chr3.3:4005398-4005417 None:intergenic 35.0%
TCCAATTGAGCAAATGGATA+GGG + chr3.3:4005598-4005617 MS.gene56211:CDS 35.0%
TTAATGCTGCAATCCATAAG+AGG + chr3.3:4004885-4004904 MS.gene56211:CDS 35.0%
TTCCAATTGAGCAAATGGAT+AGG + chr3.3:4005597-4005616 MS.gene56211:CDS 35.0%
TTGATTGCTCCTCTATATCT+TGG - chr3.3:4004657-4004676 None:intergenic 35.0%
TTGCTCAATTGGAACATTCT+TGG - chr3.3:4005591-4005610 None:intergenic 35.0%
! CTTTTATCTGCAGTTATGGT+AGG + chr3.3:4005128-4005147 MS.gene56211:CDS 35.0%
! TCCTAGTGAGATTTTTCCAT+TGG + chr3.3:4005394-4005413 MS.gene56211:CDS 35.0%
! TTCATCTTGGTGTATACATC+TGG - chr3.3:4003592-4003611 None:intergenic 35.0%
!! ATTATGCTGTTTGGTGTTTC+TGG - chr3.3:4004834-4004853 None:intergenic 35.0%
!! CATTGATTCCTGTGAATTGT+TGG - chr3.3:4005049-4005068 None:intergenic 35.0%
!! CTGTTTTGGATTATGCTGTT+TGG - chr3.3:4004843-4004862 None:intergenic 35.0%
!! CTTGTTGTCTTGTTTCATCT+TGG - chr3.3:4003605-4003624 None:intergenic 35.0%
!! TTATGCTGTTTGGTGTTTCT+GGG - chr3.3:4004833-4004852 None:intergenic 35.0%
!!! AACATCAATGGTGCCATTTT+TGG + chr3.3:4003555-4003574 MS.gene56211:CDS 35.0%
!!! AGAGTTTTGTTCATATCAGG+TGG + chr3.3:4005209-4005228 MS.gene56211:CDS 35.0%
!!! CCTTTTTTCCAACAATTCAC+AGG + chr3.3:4005038-4005057 MS.gene56211:CDS 35.0%
!!! CGAAGAGTTTTGTTCATATC+AGG + chr3.3:4005206-4005225 MS.gene56211:CDS 35.0%
!!! CTTTCTTCTTTTTTGGAGGT+TGG + chr3.3:4005522-4005541 MS.gene56211:CDS 35.0%
!!! GGAACTTTCTTCTTTTTTGG+AGG + chr3.3:4005518-4005537 MS.gene56211:CDS 35.0%
AAAACTTGCCCAAATGGCAT+AGG + chr3.3:4003386-4003405 MS.gene56211:intron 40.0%
AAACTTGCCCAAATGGCATA+GGG + chr3.3:4003387-4003406 MS.gene56211:intron 40.0%
AACATCATGTGTCCCTCTTA+TGG - chr3.3:4004901-4004920 None:intergenic 40.0%
ACATTCCTCATCTCACAAGT+CGG - chr3.3:4004406-4004425 None:intergenic 40.0%
ACCCTATCCATTTGCTCAAT+TGG - chr3.3:4005602-4005621 None:intergenic 40.0%
ACGTCACACTAGATATATCC+GGG - chr3.3:4004287-4004306 None:intergenic 40.0%
AGCACTTTCACCTAATCCAA+TGG - chr3.3:4005105-4005124 None:intergenic 40.0%
AGTATAATGGCAGCACAACT+TGG + chr3.3:4005266-4005285 MS.gene56211:CDS 40.0%
ATACTTGGTCGTGTTCTTCT+TGG + chr3.3:4003823-4003842 MS.gene56211:CDS 40.0%
ATGGCACTTCCAAGATATAG+AGG + chr3.3:4004645-4004664 MS.gene56211:CDS 40.0%
CACGTCACACTAGATATATC+CGG - chr3.3:4004288-4004307 None:intergenic 40.0%
CAGAAAAGATCAAAGACGGT+TGG + chr3.3:4004739-4004758 MS.gene56211:CDS 40.0%
CATTCCTCATCTCTACAAGT+CGG - chr3.3:4004198-4004217 None:intergenic 40.0%
CCAATTGCAAGCAATAGAAG+AGG + chr3.3:4002567-4002586 MS.gene56211:CDS 40.0%
CCTCTTCTATTGCTTGCAAT+TGG - chr3.3:4002570-4002589 None:intergenic 40.0%
CGCAAACCATCAATTCTTGT+AGG + chr3.3:4003739-4003758 MS.gene56211:CDS 40.0%
GAAAAGATCAAAGACGGTTG+GGG + chr3.3:4004741-4004760 MS.gene56211:CDS 40.0%
GCTATTGCCATAACAAGTTG+AGG - chr3.3:4005014-4005033 None:intergenic 40.0%
GGAAAAATGCTCCTAAAGTG+AGG - chr3.3:4004809-4004828 None:intergenic 40.0%
GTTCTTCTTGGAGTTGGAAT+TGG + chr3.3:4003835-4003854 MS.gene56211:CDS 40.0%
TATATCTAGTGTGACGTGAG+TGG + chr3.3:4004290-4004309 MS.gene56211:intron 40.0%
TCATCAATCACAAGAGCCTT+TGG + chr3.3:4003715-4003734 MS.gene56211:CDS 40.0%
TGCAACTGTAATACTTTGCG+CGG - chr3.3:4005432-4005451 None:intergenic 40.0%
TGTGATTCTCTCTTGTATGG+TGG + chr3.3:4002614-4002633 MS.gene56211:CDS 40.0%
TTGAGCAAATGGATAGGGTT+TGG + chr3.3:4005603-4005622 MS.gene56211:CDS 40.0%
! AATTGATGGTTTGCGACCAA+AGG - chr3.3:4003734-4003753 None:intergenic 40.0%
! GAGAGATAATGGCACTCTTT+AGG + chr3.3:4003919-4003938 MS.gene56211:intron 40.0%
! GTGTTTACCCTATGCCATTT+GGG - chr3.3:4003397-4003416 None:intergenic 40.0%
! TTCCAGCTTTGTGTTGGAAT+TGG + chr3.3:4004684-4004703 MS.gene56211:CDS 40.0%
! TTTATGTTGCCGGATTTGCT+TGG + chr3.3:4005345-4005364 MS.gene56211:CDS 40.0%
!! GACAAGACTGGTCTATTATC+TGG + chr3.3:4004020-4004039 MS.gene56211:intron 40.0%
!! TCTCACAAGTCGGTTTTGTA+TGG - chr3.3:4004396-4004415 None:intergenic 40.0%
!! TGGAATTGGCTTTGCTAATC+AGG + chr3.3:4003849-4003868 MS.gene56211:CDS 40.0%
ACCAAAGATAATGCCTCCAG+TGG - chr3.3:4002643-4002662 None:intergenic 45.0%
ACTAGATATATCCGGGTGTG+AGG - chr3.3:4004280-4004299 None:intergenic 45.0%
AGATACGAGTAGCGTACAAG+TGG + chr3.3:4003006-4003025 MS.gene56211:intron 45.0%
ATGGCGAATTTCTCTAGCCA+TGG + chr3.3:4004764-4004783 MS.gene56211:CDS 45.0%
CACCAATTCCAACACAAAGC+TGG - chr3.3:4004689-4004708 None:intergenic 45.0%
CCAAAATCCGTTGAGCTACT+CGG - chr3.3:4004328-4004347 None:intergenic 45.0%
CCAGCTACAATCCTCACTTT+AGG + chr3.3:4004795-4004814 MS.gene56211:CDS 45.0%
CCTAAAGTGAGGATTGTAGC+TGG - chr3.3:4004798-4004817 None:intergenic 45.0%
CGTGTTTACCCTATGCCATT+TGG - chr3.3:4003398-4003417 None:intergenic 45.0%
CTAGATATATCCGGGTGTGA+GGG - chr3.3:4004279-4004298 None:intergenic 45.0%
CTAGGAACCAACCATCCTAA+TGG - chr3.3:4005380-4005399 None:intergenic 45.0%
GATTGAAGGCAAACACACTG+TGG + chr3.3:4005664-4005683 MS.gene56211:CDS 45.0%
GCACCACCTACAAGAATTGA+TGG - chr3.3:4003748-4003767 None:intergenic 45.0%
GCAGTTATGGTAGGGATTGT+AGG + chr3.3:4005137-4005156 MS.gene56211:CDS 45.0%
GTCCTAGCAGCATGTCATAA+AGG - chr3.3:4004003-4004022 None:intergenic 45.0%
TAGATATATCCGGGTGTGAG+GGG - chr3.3:4004278-4004297 None:intergenic 45.0%
TGCAGGTGGTGTAACATCAA+TGG + chr3.3:4003543-4003562 MS.gene56211:intron 45.0%
TGCCTTTATGACATGCTGCT+AGG + chr3.3:4003998-4004017 MS.gene56211:intron 45.0%
TTCCTTATTGGAGCAGCTCT+TGG + chr3.3:4003772-4003791 MS.gene56211:CDS 45.0%
! ATTGGCTTCCAGCTTTGTGT+TGG + chr3.3:4004678-4004697 MS.gene56211:CDS 45.0%
! TCTCTACAAGTCGGTTTCAC+AGG - chr3.3:4004189-4004208 None:intergenic 45.0%
!! CAAAACCGACTTGTGAGATG+AGG + chr3.3:4004398-4004417 MS.gene56211:intron 45.0%
!! GAAACCGACTTGTAGAGATG+AGG + chr3.3:4004191-4004210 MS.gene56211:intron 45.0%
!!! CTTCTTTTTTGGAGGTTGGG+TGG + chr3.3:4005526-4005545 MS.gene56211:CDS 45.0%
ACATGCTGCTAGGACAAGAC+TGG + chr3.3:4004008-4004027 MS.gene56211:intron 50.0%
AGATATATCCGGGTGTGAGG+GGG - chr3.3:4004277-4004296 None:intergenic 50.0%
AGATCAAAGACGGTTGGGGA+TGG + chr3.3:4004745-4004764 MS.gene56211:CDS 50.0%
CACCAAGAGCTGCTCCAATA+AGG - chr3.3:4003777-4003796 None:intergenic 50.0%
CTTATTGGAGCAGCTCTTGG+TGG + chr3.3:4003775-4003794 MS.gene56211:CDS 50.0%
GCGGCTGATCTAATCTCCAA+TGG - chr3.3:4005413-4005432 None:intergenic 50.0%
GGTCGTGTTCTTCTTGGAGT+TGG + chr3.3:4003829-4003848 MS.gene56211:CDS 50.0%
! GCAGCACAACTTGGTGATCA+TGG + chr3.3:4005275-4005294 MS.gene56211:CDS 50.0%
! TGCCGGATTTGCTTGGTCAT+GGG + chr3.3:4005352-4005371 MS.gene56211:CDS 50.0%
! TTGCCGGATTTGCTTGGTCA+TGG + chr3.3:4005351-4005370 MS.gene56211:CDS 50.0%
!! CCGAGTAGCTCAACGGATTT+TGG + chr3.3:4004325-4004344 MS.gene56211:intron 50.0%
!! GCCACTGGAGGCATTATCTT+TGG + chr3.3:4002639-4002658 MS.gene56211:CDS 50.0%
!! GGTGGTGCTGCATTCCTTAT+TGG + chr3.3:4003760-4003779 MS.gene56211:CDS 50.0%
!! TGCTGTTTGGTGTTTCTGGG+AGG - chr3.3:4004830-4004849 None:intergenic 50.0%
ATGGGGGCCATTAGGATGGT+TGG + chr3.3:4005370-4005389 MS.gene56211:CDS 55.0%
CCCCCATGACCAAGCAAATC+CGG - chr3.3:4005357-4005376 None:intergenic 55.0%
GAGCTACTCGGTCCGCTATT+GGG - chr3.3:4004316-4004335 None:intergenic 55.0%
TCTTGTATGGTGGCTGCCAC+TGG + chr3.3:4002624-4002643 MS.gene56211:CDS 55.0%
TGACGTGAGTGGCCCAATAG+CGG + chr3.3:4004301-4004320 MS.gene56211:intron 55.0%
TGAGCTACTCGGTCCGCTAT+TGG - chr3.3:4004317-4004336 None:intergenic 55.0%
TGTAGCTGGAACTGCTGCCA+TGG - chr3.3:4004784-4004803 None:intergenic 55.0%
! CCGGATTTGCTTGGTCATGG+GGG + chr3.3:4005354-4005373 MS.gene56211:CDS 55.0%
! GCCGGATTTGCTTGGTCATG+GGG + chr3.3:4005353-4005372 MS.gene56211:CDS 55.0%
! TAGCGGACCGAGTAGCTCAA+CGG + chr3.3:4004318-4004337 MS.gene56211:intron 55.0%
GCTTGGTCATGGGGGCCATT+AGG + chr3.3:4005362-4005381 MS.gene56211:CDS 60.0%
GGTCATGGGGGCCATTAGGA+TGG + chr3.3:4005366-4005385 MS.gene56211:CDS 60.0%
TCTCAACACCCCCTCACACC+CGG + chr3.3:4004266-4004285 MS.gene56211:intron 60.0%
TGTATGGTGGCTGCCACTGG+AGG + chr3.3:4002627-4002646 MS.gene56211:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 4002549 4005694 4002549 ID=MS.gene56211
chr3.3 mRNA 4002549 4005694 4002549 ID=MS.gene56211.t1;Parent=MS.gene56211
chr3.3 exon 4002549 4002681 4002549 ID=MS.gene56211.t1.exon1;Parent=MS.gene56211.t1
chr3.3 CDS 4002549 4002681 4002549 ID=cds.MS.gene56211.t1;Parent=MS.gene56211.t1
chr3.3 exon 4003548 4003870 4003548 ID=MS.gene56211.t1.exon2;Parent=MS.gene56211.t1
chr3.3 CDS 4003548 4003870 4003548 ID=cds.MS.gene56211.t1;Parent=MS.gene56211.t1
chr3.3 exon 4004621 4005694 4004621 ID=MS.gene56211.t1.exon3;Parent=MS.gene56211.t1
chr3.3 CDS 4004621 4005694 4004621 ID=cds.MS.gene56211.t1;Parent=MS.gene56211.t1
Gene Sequence

>MS.gene56211

ATGGCAGTAGTAGAGCTACCAATTGCAAGCAATAGAAGAGGATACAATGGAAAGATGACTCCTATTGTGATTCTCTCTTGTATGGTGGCTGCCACTGGAGGCATTATCTTTGGTTATGATATAGGAATTTCAGGTGAATCTCATACCATTCAACTTCATTATCTTTTCTTACAATTATTAAATCACACTTTGCTTTTTGTGAATACACACCACAATCAAATAAAGATTTAAGTGATATTTTGTACTATCTTTTAAAAAAAAGTGATATTTGTACTTTTTTTAAACTAATATAGTTGAGTTATTTCTATTATAATGAGATTTAACATATTATTTTAGTTAAAATTTTAAATAAAATTATAAAAATTTAAAATTATAATTACTATACTTTAAATGAAAGATATAATTAGAAGAATGAAAATATCAGTCCAATATTTTTGATCCCTTATATAGTTATTATAGATACGAGTAGCGTACAAGTGGATAATTTTTGTCCATTTTTTGCGATAACAATCTTGAAAATTACGAAATGTTATGCGATTATTTAAAAAAGATTAAATTGTCTTTACATCACTGTCATTTGGACGAATTTTGATTTATCTTCCTATAAAAAAAAAACTGTAGATTTCAATCTTATAATTTAAAGATTTTTTATTTTGATCTTTCGTAAATTTTGACTATACAAAATAGATGATATGGTATGAGGGTAAACCAAAATTCGTTGAAATTACATGGGGTGAAAATACCTTAAATTTTAAATTTGAAGTCATGAAAGTCCAAAACCAAATAATCTTTAAATTACGAGTTTGAAATCCAAAGTTTTTTTACATGGGATAAATCAAAACTTGCCCAAATGGCATAGGGTAAACACGATTTAACTAAAAAAAAATGATATTTGATTGAATAAAGATAGATGAAATTGTAAATAAAAAGAAAAAATAAATAAAAGAAAAAATGAATACATCAACACTTAGAACCTTCAATTTTTTTCTCTTTTTGCAGGTGGTGTAACATCAATGGTGCCATTTTTGGAGAAGTTTTTTCCAGATGTATACACCAAGATGAAACAAGACAACAAGATAAGCAATTACTGCAAATTTGATAGCCAACTCCTAACAACATTCACTTCATCACTATATATAGCTGGCCTTTTAGCATCTTTCTTTGCTTCATCAATCACAAGAGCCTTTGGTCGCAAACCATCAATTCTTGTAGGTGGTGCTGCATTCCTTATTGGAGCAGCTCTTGGTGGTGCTGCACTTAATATATACATGCTAATACTTGGTCGTGTTCTTCTTGGAGTTGGAATTGGCTTTGCTAATCAGGTATAATATTTCTCCAATTACCATGTTTTTAAGAACAATAATGAGAAAGAGAGATAATGGCACTCTTTAGGCCACATATTTAGAAATTTTAGTGATAGTGACATAAATATGTAAGTTAATATATGGTTGCCTTTATGACATGCTGCTAGGACAAGACTGGTCTATTATCTGGAAGAGTTTCAAGGCTTAAGTATCACAATGAATATTTTTATCTAGTCGGTGTAGAACTCCTAACACACTTCACTTTTTAATTTTAGACTATAATAGATGTAGTAAGATAGGATCTCTTAAAAATTTTGTTGAATCTAATTTAAGCCTGTGAAACCGACTTGTAGAGATGAGGAATGTCTCCCACTTAATTTTCATAAATTCAATATTTCATCAATTGTCGAACTTCTCAACACCCCCTCACACCCGGATATATCTAGTGTGACGTGAGTGGCCCAATAGCGGACCGAGTAGCTCAACGGATTTTGGATAACCTGTGATATAATGTTAAAATTTGGGTTGAGACTAACTCAACCATACAAAACCGACTTGTGAGATGAGGAATGTCTCACACTTATAAACTCATTTTCAGGTAATATCTCATCCAATTTTTAGCTTCTAATCGTCATTGTGTCAGTGTAAAACATGTCTATGGATTGAATCTATAGTTATTAAGCTCTTTAATTCATTGGATTGGATACTATTATCTTGGTAACATTAAAATAAACTTTAGATGGATCAAAAGTTTCTTTTTTTCTGCAGGCAGTTCCATTATATCTATCAGAAATGGCACTTCCAAGATATAGAGGAGCAATCAACATTGGCTTCCAGCTTTGTGTTGGAATTGGTGTTCTATCAGCAAATTTAATCAACTTTGGTACAGAAAAGATCAAAGACGGTTGGGGATGGCGAATTTCTCTAGCCATGGCAGCAGTTCCAGCTACAATCCTCACTTTAGGAGCATTTTTCCTCCCAGAAACACCAAACAGCATAATCCAAAACAGCAAAAACCATCAAAAAGCTAAGTTAATGCTGCAATCCATAAGAGGGACACATGATGTTCAACAAGAATTTGAGGACCTTATTGAAGCAAGTATCATGTCAAATTCTATCAAACATCCATTTAAGAACATCTTACAAAGAAAATATAGACCTCAACTTGTTATGGCAATAGCTATACCTTTTTTCCAACAATTCACAGGAATCAATGTCATTTCCTTTTATGCTCCAATCCTATTTTTAACCATTGGATTAGGTGAAAGTGCTTCACTTTTATCTGCAGTTATGGTAGGGATTGTAGGTACTACTTCAACATTCATATCAATGCTTATAGTCGATAAACTAGGTCGAAGAGTTTTGTTCATATCAGGTGGAATTCAAATGTTCTTCTCACAAATTCTTATAGGAAGTATAATGGCAGCACAACTTGGTGATCATGGTGAAATAAGCAAGAAATATGCATATTTGATTCTAGTTTTGATATGCATTTATGTTGCCGGATTTGCTTGGTCATGGGGGCCATTAGGATGGTTGGTTCCTAGTGAGATTTTTCCATTGGAGATTAGATCAGCCGCGCAAAGTATTACAGTTGCAGTGAACTTTCTGTTTACTTTCATTGTTGCTCAAACTTTTCTTAGTATGTTATGTCATTTCAAGTATGGAACTTTCTTCTTTTTTGGAGGTTGGGTGGTTATGATGACAGTGTTTGTTTATTTTCTGTTACCAGAAACCAAGAATGTTCCAATTGAGCAAATGGATAGGGTTTGGAGAGAACATTTTTTTTGGAAAAAAATTGTTGGAGACAAGATTGAAGGCAAACACACTGTGGTGCCTTAA
Protein sequence

>MS.gene56211.t1

MAVVELPIASNRRGYNGKMTPIVILSCMVAATGGIIFGYDIGISGGVTSMVPFLEKFFPDVYTKMKQDNKISNYCKFDSQLLTTFTSSLYIAGLLASFFASSITRAFGRKPSILVGGAAFLIGAALGGAALNIYMLILGRVLLGVGIGFANQAVPLYLSEMALPRYRGAINIGFQLCVGIGVLSANLINFGTEKIKDGWGWRISLAMAAVPATILTLGAFFLPETPNSIIQNSKNHQKAKLMLQSIRGTHDVQQEFEDLIEASIMSNSIKHPFKNILQRKYRPQLVMAIAIPFFQQFTGINVISFYAPILFLTIGLGESASLLSAVMVGIVGTTSTFISMLIVDKLGRRVLFISGGIQMFFSQILIGSIMAAQLGDHGEISKKYAYLILVLICIYVAGFAWSWGPLGWLVPSEIFPLEIRSAAQSITVAVNFLFTFIVAQTFLSMLCHFKYGTFFFFGGWVVMMTVFVYFLLPETKNVPIEQMDRVWREHFFWKKIVGDKIEGKHTVVP