AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50065


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50065.t1 MTR_4g069500 99.042 522 5 0 1 522 1 522 0.0 1048
MS.gene50065.t1 MTR_4g069500 98.941 472 5 0 51 522 1 472 0.0 943
MS.gene50065.t1 MTR_3g116240 81.967 488 86 1 13 498 11 498 0.0 826
MS.gene50065.t1 MTR_4g072030 75.096 522 123 3 1 522 1 515 0.0 790
MS.gene50065.t1 MTR_4g069500 99.399 333 2 0 190 522 1 333 0.0 670
MS.gene50065.t1 MTR_8g077890 59.877 486 191 3 27 510 16 499 0.0 583
MS.gene50065.t1 MTR_5g075300 56.584 486 206 3 25 508 14 496 0.0 573
MS.gene50065.t1 MTR_6g088450 53.196 485 215 2 2 483 27 502 0.0 526
MS.gene50065.t1 MTR_2g013310 52.024 494 216 5 22 515 45 517 2.06e-176 507
MS.gene50065.t1 MTR_8g103500 52.258 465 214 2 27 491 15 471 2.20e-166 481
MS.gene50065.t1 MTR_7g446340 47.732 507 244 6 12 517 41 527 2.69e-163 474
MS.gene50065.t1 MTR_6g007340 47.732 507 244 6 12 517 41 527 2.69e-163 474
MS.gene50065.t1 MTR_2g013310 51.613 465 204 5 51 515 1 444 6.49e-163 470
MS.gene50065.t1 MTR_5g019870 47.590 498 241 5 27 519 12 494 3.85e-158 459
MS.gene50065.t1 MTR_3g084110 30.847 496 313 9 20 508 16 488 3.18e-72 238
MS.gene50065.t1 MTR_1g116660 31.837 490 300 11 17 497 20 484 7.48e-71 235
MS.gene50065.t1 MTR_7g005910 30.357 504 319 10 17 510 18 499 2.60e-70 233
MS.gene50065.t1 MTR_1g116650 30.181 497 301 8 17 502 63 524 1.48e-68 229
MS.gene50065.t1 MTR_4g077740 31.818 506 299 15 9 489 14 498 2.87e-68 228
MS.gene50065.t1 MTR_3g074410 29.400 500 304 11 34 507 29 505 1.81e-60 207
MS.gene50065.t1 MTR_7g082270 31.546 485 295 12 11 488 45 499 2.07e-60 207
MS.gene50065.t1 MTR_5g006070 29.134 508 309 11 32 513 25 507 1.93e-58 202
MS.gene50065.t1 MTR_0009s0370 28.952 525 321 13 20 515 10 511 4.33e-58 201
MS.gene50065.t1 MTR_6g018790 31.533 463 273 11 36 488 111 539 1.02e-57 201
MS.gene50065.t1 MTR_5g006070 29.825 456 291 8 63 513 28 459 2.74e-57 198
MS.gene50065.t1 MTR_3g023480 29.868 529 321 11 11 508 2 511 2.99e-57 199
MS.gene50065.t1 MTR_5g020270 28.542 487 312 10 12 491 31 488 5.00e-56 195
MS.gene50065.t1 MTR_5g077580 28.036 560 272 12 26 488 22 547 1.73e-54 193
MS.gene50065.t1 MTR_7g094450 28.660 485 306 9 12 490 22 472 2.18e-54 190
MS.gene50065.t1 MTR_5g041550 27.843 510 319 10 28 510 22 509 2.43e-54 191
MS.gene50065.t1 MTR_1g038600 29.191 507 321 9 1 499 1 477 8.78e-54 189
MS.gene50065.t1 MTR_3g074390 28.340 494 313 8 34 505 32 506 1.00e-53 189
MS.gene50065.t1 MTR_1g104750 28.630 489 302 12 32 497 26 490 1.51e-53 189
MS.gene50065.t1 MTR_3g008160 26.415 530 341 11 6 513 3 505 2.11e-53 188
MS.gene50065.t1 MTR_0204s0020 28.454 485 306 9 31 495 23 486 3.42e-53 187
MS.gene50065.t1 MTR_4g090600 28.630 489 298 11 34 496 27 490 6.15e-53 187
MS.gene50065.t1 MTR_4g118610 28.689 488 311 9 10 491 30 486 6.60e-53 187
MS.gene50065.t1 MTR_8g077310 27.273 462 307 8 33 491 50 485 6.82e-53 187
MS.gene50065.t1 MTR_1g104780 28.090 534 324 11 19 521 11 515 7.53e-53 187
MS.gene50065.t1 MTR_1g104770 27.088 491 311 9 34 497 27 497 8.93e-53 187
MS.gene50065.t1 MTR_7g082270 32.701 422 247 12 11 425 45 436 1.06e-52 186
MS.gene50065.t1 MTR_0204s0020 28.423 482 307 9 31 495 23 483 1.83e-52 186
MS.gene50065.t1 MTR_5g020270 30.476 420 251 10 81 491 1 388 3.10e-52 182
MS.gene50065.t1 MTR_1g022315 28.817 465 299 7 32 491 51 488 6.01e-52 184
MS.gene50065.t1 MTR_3g008170 27.096 513 333 10 21 510 13 507 7.75e-52 184
MS.gene50065.t1 MTR_1g038630 27.599 529 327 10 1 503 1 499 9.68e-52 184
MS.gene50065.t1 MTR_2g049020 32.500 360 223 6 26 382 22 364 1.09e-51 185
MS.gene50065.t1 MTR_7g113970 29.103 457 296 7 35 491 67 495 1.46e-51 183
MS.gene50065.t1 MTR_3g008160 28.082 438 290 7 78 513 42 456 2.51e-51 182
MS.gene50065.t1 MTR_4g091370 27.607 489 303 9 34 496 27 490 3.33e-51 183
MS.gene50065.t1 MTR_8g077300 27.291 502 310 10 16 491 5 477 3.42e-51 182
MS.gene50065.t1 MTR_5g082540 29.038 520 316 12 21 512 14 508 4.98e-51 182
MS.gene50065.t1 MTR_2g020710 29.694 458 279 9 41 490 60 482 7.66e-51 181
MS.gene50065.t1 MTR_0204s0040 28.024 496 315 10 21 495 20 494 1.01e-50 181
MS.gene50065.t1 MTR_3g093010 27.345 501 316 10 31 506 23 500 1.07e-50 181
MS.gene50065.t1 MTR_3g093060 29.298 413 269 6 80 488 46 439 1.61e-50 179
MS.gene50065.t1 MTR_2g026160 31.856 361 233 4 22 379 19 369 6.84e-50 181
MS.gene50065.t1 MTR_2g026160 37.374 99 62 0 398 496 463 561 1.86e-14 76.6
MS.gene50065.t1 MTR_4g116770 28.024 496 315 10 21 495 216 690 9.55e-50 182
MS.gene50065.t1 MTR_8g102860 26.901 513 324 13 29 512 26 516 1.18e-49 179
MS.gene50065.t1 MTR_7g094110 28.601 479 314 7 12 490 24 474 2.28e-49 177
MS.gene50065.t1 MTR_2g020710 30.189 424 253 9 75 490 5 393 4.60e-49 174
MS.gene50065.t1 MTR_8g102860 29.040 427 273 10 95 512 59 464 1.01e-48 175
MS.gene50065.t1 MTR_4g116790 27.639 521 331 11 21 520 18 513 1.20e-48 176
MS.gene50065.t1 MTR_3g007910 27.088 491 304 11 31 507 23 473 1.36e-48 175
MS.gene50065.t1 MTR_5g094760 27.218 496 315 10 23 495 20 492 1.82e-48 175
MS.gene50065.t1 MTR_6g087040 24.748 497 333 9 31 506 28 504 2.80e-48 174
MS.gene50065.t1 MTR_6g088375 24.748 497 333 9 31 506 28 504 2.80e-48 174
MS.gene50065.t1 MTR_7g091690 28.112 498 308 12 23 497 20 490 6.95e-48 173
MS.gene50065.t1 MTR_8g077310 27.578 417 267 9 81 491 1 388 1.46e-47 170
MS.gene50065.t1 MTR_1g022315 29.567 416 261 7 81 491 1 389 1.69e-47 170
MS.gene50065.t1 MTR_5g020270 27.010 485 301 10 12 491 31 467 5.06e-47 170
MS.gene50065.t1 MTR_7g113960 28.238 471 300 9 41 507 38 474 2.47e-46 169
MS.gene50065.t1 MTR_2g048720 32.869 359 208 8 26 374 22 357 2.89e-46 170
MS.gene50065.t1 MTR_3g074270 27.160 486 288 12 34 495 27 470 1.76e-44 164
MS.gene50065.t1 MTR_3g080240 28.151 476 289 13 30 490 93 530 1.18e-43 162
MS.gene50065.t1 MTR_2g026140 30.978 368 219 7 36 398 30 367 5.98e-41 155
MS.gene50065.t1 MTR_2g026140 36.364 99 63 0 398 496 448 546 6.61e-11 65.1
MS.gene50065.t1 MTR_4g064820 30.874 366 221 13 26 371 88 441 1.51e-40 153
MS.gene50065.t1 MTR_3g074370 30.973 339 207 7 176 508 21 338 4.16e-40 148
MS.gene50065.t1 MTR_3g074320 29.970 337 213 6 176 508 21 338 3.54e-39 145
MS.gene50065.t1 MTR_2g020710 29.351 385 230 8 41 417 60 410 4.05e-39 147
MS.gene50065.t1 MTR_3g074340 30.383 339 209 7 176 508 21 338 4.16e-39 145
MS.gene50065.t1 MTR_4g118610 28.019 414 262 8 10 417 30 413 5.78e-39 147
MS.gene50065.t1 MTR_6g087910 27.143 490 320 10 7 488 23 483 5.98e-39 148
MS.gene50065.t1 MTR_2g020710 29.427 384 229 8 41 416 60 409 8.65e-39 147
MS.gene50065.t1 MTR_7g094110 26.722 479 303 7 12 490 24 454 9.18e-39 147
MS.gene50065.t1 MTR_3g074380 27.606 355 220 6 34 369 30 366 3.70e-38 144
MS.gene50065.t1 MTR_8g077310 27.193 342 224 5 33 374 50 366 3.65e-37 142
MS.gene50065.t1 MTR_4g013205 26.749 486 323 9 6 488 14 469 3.50e-36 140
MS.gene50065.t1 MTR_7g113970 27.035 344 225 5 35 378 67 384 1.23e-32 129
MS.gene50065.t1 MTR_3g116060 34.043 235 144 5 28 257 2 230 1.41e-32 132
MS.gene50065.t1 MTR_3g116060 29.167 240 154 6 272 502 496 728 1.22e-21 99.4
MS.gene50065.t1 MTR_2g020710 27.778 342 206 7 41 374 60 368 1.16e-29 120
MS.gene50065.t1 MTR_4g116790 25.210 357 229 6 21 358 18 355 3.52e-29 119
MS.gene50065.t1 MTR_3g118530 36.098 205 121 5 41 239 15 215 1.04e-28 120
MS.gene50065.t1 MTR_3g118530 29.730 222 140 6 273 485 507 721 6.99e-23 103
MS.gene50065.t1 MTR_3g118530 36.098 205 121 5 41 239 15 215 1.49e-28 120
MS.gene50065.t1 MTR_7g113960 27.485 342 214 7 41 378 38 349 3.85e-28 116
MS.gene50065.t1 MTR_5g024740 33.005 203 128 4 34 231 8 207 1.28e-25 111
MS.gene50065.t1 MTR_5g024740 29.249 253 160 6 245 485 458 703 1.25e-17 86.7
MS.gene50065.t1 MTR_8g073100 31.527 203 131 5 34 231 8 207 3.03e-24 107
MS.gene50065.t1 MTR_8g073100 27.928 222 144 4 273 485 485 699 1.67e-18 89.4
MS.gene50065.t1 MTR_5g044910 31.527 203 131 4 34 231 8 207 6.07e-24 106
MS.gene50065.t1 MTR_5g044910 27.068 266 171 6 231 485 448 701 4.45e-18 88.2
MS.gene50065.t1 MTR_3g074400 25.000 424 244 12 81 481 44 416 5.94e-23 101
MS.gene50065.t1 MTR_1g069935 24.453 548 305 22 11 487 2 511 1.11e-12 70.9
MS.gene50065.t1 MTR_2g081930 24.762 420 267 18 80 486 134 517 1.37e-12 70.5
MS.gene50065.t1 MTR_5g096000 30.667 150 103 1 31 179 23 172 1.01e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50065.t1 AT3G18830 72.565 503 135 3 20 519 26 528 0.0 755
MS.gene50065.t1 AT2G16120 67.617 491 156 3 23 511 19 508 0.0 684
MS.gene50065.t1 AT2G16130 67.360 481 155 2 23 501 19 499 0.0 675
MS.gene50065.t1 AT4G36670 57.526 485 205 1 21 504 8 492 0.0 576
MS.gene50065.t1 AT2G18480 58.542 480 195 3 13 491 7 483 0.0 556
MS.gene50065.t1 AT2G20780 49.004 502 236 6 8 506 34 518 2.39e-166 481
MS.gene50065.t1 AT2G20780 49.446 451 209 5 59 506 26 460 3.98e-148 433
MS.gene50065.t1 AT2G43330 31.928 498 312 8 6 497 5 481 3.92e-69 231
MS.gene50065.t1 AT5G59250 31.590 478 278 11 35 489 103 554 4.05e-65 221
MS.gene50065.t1 AT5G17010 31.225 506 294 15 13 489 20 500 8.95e-65 219
MS.gene50065.t1 AT5G17010 31.225 506 294 15 13 489 20 500 8.95e-65 219
MS.gene50065.t1 AT5G17010 31.225 506 294 15 13 489 20 500 8.95e-65 219
MS.gene50065.t1 AT1G50310 28.858 499 309 9 34 509 29 504 2.69e-62 213
MS.gene50065.t1 AT1G11260 28.655 513 318 11 31 519 25 513 8.94e-62 211
MS.gene50065.t1 AT3G19940 29.249 506 297 11 34 509 29 503 1.77e-60 207
MS.gene50065.t1 AT3G05150 30.435 506 303 10 7 500 8 476 3.56e-59 203
MS.gene50065.t1 AT5G16150 32.265 499 289 12 5 488 75 539 5.68e-59 204
MS.gene50065.t1 AT5G16150 32.265 499 289 12 5 488 75 539 5.68e-59 204
MS.gene50065.t1 AT5G16150 32.265 499 289 12 5 488 75 539 5.68e-59 204
MS.gene50065.t1 AT3G03090 31.210 471 286 12 35 489 52 500 8.01e-59 203
MS.gene50065.t1 AT5G27360 29.124 491 309 12 8 491 10 468 1.84e-58 201
MS.gene50065.t1 AT5G27360 29.124 491 309 12 8 491 58 516 4.35e-58 201
MS.gene50065.t1 AT3G05150 30.101 495 299 9 7 489 8 467 1.28e-57 199
MS.gene50065.t1 AT3G05150 30.101 495 299 9 7 489 8 467 1.28e-57 199
MS.gene50065.t1 AT5G23270 29.084 502 285 11 34 499 28 494 4.10e-57 199
MS.gene50065.t1 AT5G27350 28.974 497 310 11 1 490 3 463 2.17e-56 196
MS.gene50065.t1 AT1G54730 30.283 459 282 10 41 494 43 468 5.03e-55 192
MS.gene50065.t1 AT3G05960 28.240 517 324 10 20 509 11 507 9.03e-55 192
MS.gene50065.t1 AT1G75220 28.448 464 303 7 31 491 49 486 1.60e-54 191
MS.gene50065.t1 AT5G18840 28.252 492 313 8 7 490 18 477 4.25e-54 190
MS.gene50065.t1 AT3G19930 27.481 524 332 11 15 515 12 510 4.85e-54 190
MS.gene50065.t1 AT3G19930 27.481 524 332 11 15 515 12 510 4.85e-54 190
MS.gene50065.t1 AT5G26340 27.755 490 306 11 32 497 26 491 3.35e-53 188
MS.gene50065.t1 AT1G34580 29.032 496 304 13 34 502 28 502 3.44e-53 188
MS.gene50065.t1 AT5G26250 27.992 518 328 11 14 510 10 503 5.74e-53 187
MS.gene50065.t1 AT1G19450 28.017 464 305 7 31 491 50 487 1.32e-52 186
MS.gene50065.t1 AT4G21480 29.000 500 308 13 25 499 18 495 2.53e-52 186
MS.gene50065.t1 AT1G34580 30.930 430 268 10 81 502 44 452 3.02e-52 184
MS.gene50065.t1 AT3G05165 26.908 498 314 10 6 490 2 462 1.10e-51 183
MS.gene50065.t1 AT3G05165 26.908 498 314 10 6 490 2 462 1.10e-51 183
MS.gene50065.t1 AT3G05165 26.908 498 314 10 6 490 2 462 1.10e-51 183
MS.gene50065.t1 AT1G50310 31.267 371 229 7 142 509 14 361 9.35e-51 178
MS.gene50065.t1 AT3G05160 25.941 478 314 7 21 490 8 453 2.31e-49 176
MS.gene50065.t1 AT1G07340 28.654 520 327 12 9 507 2 498 2.57e-49 177
MS.gene50065.t1 AT5G27360 30.990 384 231 10 110 490 11 363 4.78e-49 173
MS.gene50065.t1 AT5G27360 30.990 384 231 10 110 490 11 363 4.78e-49 173
MS.gene50065.t1 AT1G30220 31.988 347 216 5 26 367 24 355 7.34e-49 177
MS.gene50065.t1 AT1G30220 31.356 118 75 1 398 509 463 580 1.00e-13 74.3
MS.gene50065.t1 AT2G48020 27.216 485 315 10 8 489 10 459 1.27e-48 174
MS.gene50065.t1 AT2G48020 27.216 485 315 10 8 489 10 459 1.27e-48 174
MS.gene50065.t1 AT4G02050 27.220 518 328 10 21 511 18 513 2.77e-48 175
MS.gene50065.t1 AT4G02050 27.220 518 328 10 21 511 18 513 2.77e-48 175
MS.gene50065.t1 AT1G08930 27.823 496 311 11 8 489 27 489 3.83e-48 174
MS.gene50065.t1 AT1G08930 27.823 496 311 11 8 489 27 489 3.83e-48 174
MS.gene50065.t1 AT1G54730 30.244 410 249 9 41 445 43 420 1.46e-47 171
MS.gene50065.t1 AT1G05030 30.480 479 274 14 30 490 79 516 2.12e-47 172
MS.gene50065.t1 AT1G77210 27.146 501 320 11 29 506 26 504 8.29e-47 171
MS.gene50065.t1 AT1G77210 27.146 501 320 11 29 506 26 504 8.29e-47 171
MS.gene50065.t1 AT3G05400 28.009 457 289 11 41 491 37 459 3.17e-46 168
MS.gene50065.t1 AT3G05160 26.667 435 283 6 60 490 2 404 1.04e-45 165
MS.gene50065.t1 AT3G05160 26.667 435 283 6 60 490 2 404 1.04e-45 165
MS.gene50065.t1 AT2G35740 30.471 361 236 7 29 385 25 374 1.35e-45 169
MS.gene50065.t1 AT2G35740 33.628 113 72 1 398 507 466 578 5.72e-14 75.1
MS.gene50065.t1 AT4G04750 27.273 440 282 13 58 491 64 471 1.44e-45 167
MS.gene50065.t1 AT4G04750 27.273 440 282 13 58 491 64 471 1.44e-45 167
MS.gene50065.t1 AT4G04750 27.273 440 282 13 58 491 108 515 2.30e-45 167
MS.gene50065.t1 AT1G54730 28.665 457 271 11 41 494 43 447 5.15e-45 164
MS.gene50065.t1 AT5G61520 25.686 510 331 10 25 506 19 508 5.33e-45 166
MS.gene50065.t1 AT4G16480 30.585 376 241 7 1 371 1 361 3.77e-44 164
MS.gene50065.t1 AT4G16480 35.345 116 71 1 398 509 467 582 1.05e-15 80.5
MS.gene50065.t1 AT4G16480 30.585 376 241 7 1 371 1 361 3.77e-44 164
MS.gene50065.t1 AT4G16480 35.345 116 71 1 398 509 467 582 1.05e-15 80.5
MS.gene50065.t1 AT4G16480 30.585 376 241 7 1 371 1 361 3.77e-44 164
MS.gene50065.t1 AT4G16480 35.345 116 71 1 398 509 467 582 1.05e-15 80.5
MS.gene50065.t1 AT4G04760 27.312 465 297 12 35 491 36 467 1.47e-43 161
MS.gene50065.t1 AT4G04760 27.727 440 277 12 60 491 2 408 2.61e-43 159
MS.gene50065.t1 AT5G61520 27.040 429 290 7 81 506 52 460 3.39e-43 160
MS.gene50065.t1 AT5G27360 28.471 425 266 11 8 425 10 403 3.54e-43 159
MS.gene50065.t1 AT1G08890 26.096 479 321 8 21 494 13 463 4.80e-43 159
MS.gene50065.t1 AT3G05400 30.380 395 234 12 104 491 79 439 1.01e-42 158
MS.gene50065.t1 AT1G79820 30.720 472 286 12 28 491 52 490 1.04e-42 159
MS.gene50065.t1 AT1G79820 30.720 472 286 12 28 491 52 490 1.04e-42 159
MS.gene50065.t1 AT3G05155 26.049 453 295 8 41 488 38 455 1.53e-42 158
MS.gene50065.t1 AT1G08900 26.638 473 316 9 22 494 12 453 6.28e-42 156
MS.gene50065.t1 AT3G05165 26.651 439 288 8 6 439 2 411 9.16e-42 156
MS.gene50065.t1 AT3G05165 26.651 439 288 8 6 439 2 411 9.16e-42 156
MS.gene50065.t1 AT1G67300 27.475 495 321 10 6 490 23 489 2.38e-41 155
MS.gene50065.t1 AT1G54730 29.581 382 232 9 41 417 43 392 2.42e-41 154
MS.gene50065.t1 AT1G54730 29.581 382 232 9 41 417 43 392 2.42e-41 154
MS.gene50065.t1 AT1G05030 29.412 459 265 13 50 490 47 464 3.12e-41 154
MS.gene50065.t1 AT3G05165 26.651 439 288 8 6 439 2 411 3.36e-41 155
MS.gene50065.t1 AT1G08900 26.569 478 318 9 22 494 12 461 3.94e-41 154
MS.gene50065.t1 AT1G08900 26.569 478 318 9 22 494 12 461 3.94e-41 154
MS.gene50065.t1 AT1G08900 27.231 437 290 8 58 494 11 419 9.02e-41 152
MS.gene50065.t1 AT1G67300 26.721 494 325 10 6 490 23 488 9.67e-40 151
MS.gene50065.t1 AT1G67300 26.721 494 325 10 6 490 23 488 9.67e-40 151
MS.gene50065.t1 AT5G17010 27.059 510 262 16 7 489 11 437 6.22e-39 147
MS.gene50065.t1 AT1G67300 26.984 441 285 10 6 437 23 435 2.62e-38 146
MS.gene50065.t1 AT1G67300 26.984 441 285 10 6 437 23 435 2.62e-38 146
MS.gene50065.t1 AT1G54730 28.431 408 238 10 41 445 43 399 9.62e-38 144
MS.gene50065.t1 AT1G79820 31.084 415 251 10 28 437 52 436 1.37e-37 144
MS.gene50065.t1 AT1G67300 26.852 432 279 10 6 428 23 426 1.56e-37 143
MS.gene50065.t1 AT1G67300 26.852 432 279 10 6 428 23 426 1.56e-37 143
MS.gene50065.t1 AT1G77210 27.419 372 246 7 138 506 5 355 4.62e-37 140
MS.gene50065.t1 AT3G20460 26.432 454 296 9 45 493 68 488 6.09e-37 143
MS.gene50065.t1 AT4G04760 25.806 465 301 13 35 491 36 464 4.81e-36 140
MS.gene50065.t1 AT1G54730 29.375 320 194 7 41 357 43 333 2.54e-34 132
MS.gene50065.t1 AT3G51490 35.776 232 134 7 34 257 8 232 4.50e-34 137
MS.gene50065.t1 AT3G51490 28.682 258 165 7 244 491 472 720 7.18e-22 100
MS.gene50065.t1 AT3G51490 35.776 232 134 7 34 257 8 232 4.73e-34 137
MS.gene50065.t1 AT3G51490 27.165 254 166 7 244 491 472 712 1.73e-18 89.4
MS.gene50065.t1 AT1G20840 36.364 209 123 4 28 231 2 205 2.03e-32 132
MS.gene50065.t1 AT1G20840 30.864 243 150 6 272 503 498 733 1.36e-18 89.7
MS.gene50065.t1 AT1G20840 36.364 209 123 4 28 231 2 205 2.03e-32 132
MS.gene50065.t1 AT1G20840 30.864 243 150 6 272 503 498 733 1.36e-18 89.7
MS.gene50065.t1 AT1G08920 25.926 459 294 13 41 490 43 464 5.05e-32 129
MS.gene50065.t1 AT1G54730 27.632 380 221 10 41 417 43 371 7.94e-32 127
MS.gene50065.t1 AT1G08900 26.340 429 284 8 22 445 12 413 1.48e-31 127
MS.gene50065.t1 AT2G48020 26.870 361 232 7 23 380 21 352 1.93e-31 125
MS.gene50065.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.90e-30 125
MS.gene50065.t1 AT4G35300 28.400 250 155 5 266 502 489 727 1.55e-22 102
MS.gene50065.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.90e-30 125
MS.gene50065.t1 AT4G35300 28.400 250 155 5 266 502 489 727 1.55e-22 102
MS.gene50065.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.90e-30 125
MS.gene50065.t1 AT4G35300 28.400 250 155 5 266 502 489 727 1.55e-22 102
MS.gene50065.t1 AT4G35300 34.404 218 132 6 41 252 15 227 3.25e-30 125
MS.gene50065.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.81e-22 102
MS.gene50065.t1 AT4G35300 34.404 218 132 6 41 252 15 227 3.25e-30 125
MS.gene50065.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.81e-22 102
MS.gene50065.t1 AT4G35300 34.404 218 132 6 41 252 15 227 3.25e-30 125
MS.gene50065.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.81e-22 102
MS.gene50065.t1 AT4G35300 34.404 218 132 6 41 252 15 227 3.25e-30 125
MS.gene50065.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.81e-22 102
MS.gene50065.t1 AT4G35300 34.404 218 132 6 41 252 15 227 3.25e-30 125
MS.gene50065.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.81e-22 102
MS.gene50065.t1 AT4G35300 34.404 218 132 6 41 252 15 227 3.25e-30 125
MS.gene50065.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.81e-22 102
MS.gene50065.t1 AT4G35300 34.404 218 132 6 41 252 15 227 3.25e-30 125
MS.gene50065.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.81e-22 102
MS.gene50065.t1 AT1G08920 25.536 466 294 14 41 490 43 471 9.61e-30 122
MS.gene50065.t1 AT1G54730 28.383 303 188 7 41 339 43 320 3.20e-29 118
MS.gene50065.t1 AT1G54730 28.383 303 188 7 41 339 43 320 3.20e-29 118
MS.gene50065.t1 AT2G48020 26.176 340 219 7 23 359 21 331 6.99e-28 115
MS.gene50065.t1 AT3G51490 36.757 185 106 5 80 257 2 182 1.18e-27 117
MS.gene50065.t1 AT3G51490 28.682 258 165 7 244 491 422 670 9.63e-22 99.8
MS.gene50065.t1 AT3G05155 25.705 319 204 8 41 357 38 325 3.97e-26 109
MS.gene50065.t1 AT1G08920 25.765 392 246 12 41 423 43 398 1.37e-23 103
MS.gene50065.t1 AT4G35300 28.400 250 155 5 266 502 302 540 1.24e-22 101
MS.gene50065.t1 AT1G79820 30.918 207 137 3 28 231 52 255 6.85e-17 83.6
MS.gene50065.t1 AT1G79820 33.553 152 93 3 342 491 297 442 1.59e-11 67.0
MS.gene50065.t1 AT1G79820 33.553 152 93 3 342 491 235 380 1.19e-11 67.0
MS.gene50065.t1 AT5G43340 22.458 472 280 16 66 488 68 502 4.83e-11 65.5
MS.gene50065.t1 AT3G13050 26.136 440 265 15 81 486 74 487 5.02e-11 65.5
MS.gene50065.t1 AT3G13050 26.136 440 265 15 81 486 74 487 5.02e-11 65.5
MS.gene50065.t1 AT3G13050 26.136 440 265 15 81 486 74 487 5.02e-11 65.5
MS.gene50065.t1 AT3G13050 26.136 440 265 15 81 486 74 487 5.02e-11 65.5

Find 114 sgRNAs with CRISPR-Local

Find 169 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCAAACACAAAGCTAAAT+TGG 0.143556 4.2:-37215307 MS.gene50065:CDS
TCAAAACTATCACTTAAATT+AGG 0.212301 4.2:-37215995 MS.gene50065:CDS
TTTACCATATCCAAGTAAAA+TGG 0.248936 4.2:+37217054 None:intergenic
CTCATTGGTTCATGTCTTGC+CGG 0.296833 4.2:-37216706 MS.gene50065:CDS
GAAGAAATGGAAGCCTCTTT+TGG 0.298781 4.2:-37214990 MS.gene50065:CDS
CTTGTGGTGTTGTGGTGAAT+AGG 0.316596 4.2:-37215160 MS.gene50065:CDS
TAAGGCTCCGGCAAAGAAAA+TGG 0.330343 4.2:+37216633 None:intergenic
TTTGGAGGTATTGCTACAAT+TGG 0.332942 4.2:-37215062 MS.gene50065:CDS
CGTTACACCATCGTGTTTGC+CGG 0.353883 4.2:-37216658 MS.gene50065:CDS
GGGAAAATTGAGGTCTTGTT+AGG 0.356338 4.2:-37216748 MS.gene50065:CDS
TAGTCCTACAATCTTCAAAA+AGG 0.362052 4.2:-37215516 MS.gene50065:CDS
CAAGTTGCACAAGTTCAGTT+AGG 0.362764 4.2:-37214915 MS.gene50065:CDS
TTGTAGCAATACCTCCAAAT+AGG 0.368433 4.2:+37215066 None:intergenic
AACTACAACTTCCTCATGTT+TGG 0.374495 4.2:-37216592 MS.gene50065:CDS
GAGAAAGCCACGAGAGGAAG+CGG 0.386076 4.2:+37216498 None:intergenic
ACATCGTCGTTGCAATCTTC+AGG 0.387621 4.2:+37215686 None:intergenic
TATGTAGCAACTTTCTCAAT+TGG 0.390137 4.2:-37215251 MS.gene50065:CDS
AGGTAAAACACTTGAAGAAA+TGG 0.392070 4.2:-37215003 MS.gene50065:CDS
GAGACTTCAGCGGTATAGAC+TGG 0.401754 4.2:+37216523 None:intergenic
AAAACACTGGTGAAGGTGTA+TGG 0.424900 4.2:-37215646 MS.gene50065:CDS
TTCAAACACAAAGCTAAATT+GGG 0.444039 4.2:-37215306 MS.gene50065:CDS
AGAAAGCCACGAGAGGAAGC+GGG 0.446522 4.2:+37216499 None:intergenic
AACTATCACTTAAATTAGGT+TGG 0.451312 4.2:-37215991 MS.gene50065:CDS
AACATGAGGAAGTTGTAGTT+TGG 0.455379 4.2:+37216595 None:intergenic
TTGGAGGTATTGCTACAATT+GGG 0.464188 4.2:-37215061 MS.gene50065:CDS
TTGTGGTGTTGTGGTGAATA+GGG 0.468285 4.2:-37215159 MS.gene50065:CDS
CCTTTGAGGTTGAGGGCACA+AGG 0.470587 4.2:-37215188 MS.gene50065:CDS
AGCATAGCCGATGCCAACTC+CGG 0.471335 4.2:+37216558 None:intergenic
ATCAACATCTACTCTCTCAT+TGG 0.471388 4.2:-37216721 MS.gene50065:CDS
TGCCAACTCCGGCGACAAAA+CGG 0.474251 4.2:+37216569 None:intergenic
TGGTGAATAGGGTCACTAGT+GGG 0.475348 4.2:-37215148 MS.gene50065:CDS
CCTTAGCTGAGCCTCTTCCT+TGG 0.476032 4.2:+37215829 None:intergenic
ACGAGCCATCGTGGTGACTC+TGG 0.481166 4.2:+37215905 None:intergenic
CTTTGCCGGAGCCTTACTCA+TGG 0.483078 4.2:-37216626 MS.gene50065:CDS
ACAAAGCTAAATTGGGCCAT+TGG 0.485743 4.2:-37215299 MS.gene50065:CDS
ACTCACTAGTGTTGGTGGTA+TGG 0.486491 4.2:-37215375 MS.gene50065:CDS
GAGAAAATCAAAGAATACTA+AGG 0.489393 4.2:-37214958 MS.gene50065:CDS
TCCAGCGGCTTGTTTAATCT+CGG 0.492502 4.2:+37215712 None:intergenic
CTGTTACTCACTAGTGTTGG+TGG 0.493290 4.2:-37215380 MS.gene50065:CDS
AGACTTCAGCGGTATAGACT+GGG 0.494870 4.2:+37216524 None:intergenic
CTAATTGCAACCATAGCCGT+TGG 0.498739 4.2:-37215467 MS.gene50065:CDS
TCCAAGTAAAATGGAAGTCA+TGG 0.500166 4.2:+37217063 None:intergenic
TCTAAAGGAATTACGATTGG+TGG 0.500778 4.2:-37215098 MS.gene50065:CDS
TTTGTCGCCGGAGTTGGCAT+CGG 0.500928 4.2:-37216565 MS.gene50065:CDS
CTCGTAATGAGAGGTCGTTT+AGG 0.500941 4.2:-37215887 MS.gene50065:CDS
TGGTGAGAAACCCATGAGTA+AGG 0.502832 4.2:+37216615 None:intergenic
CATATTGTAATAGCTGCACT+AGG 0.508847 4.2:-37215587 MS.gene50065:CDS
TTTGCCGGAGCCTTACTCAT+GGG 0.509489 4.2:-37216625 MS.gene50065:CDS
CTTAACAAATCCAACGGCTA+TGG 0.515197 4.2:+37215457 None:intergenic
GCAACTTTCTCAATTGGTGC+AGG 0.518421 4.2:-37215245 MS.gene50065:CDS
AATCCAGTCGGAGGTTCTGC+CGG 0.519805 4.2:+37216687 None:intergenic
CAACAAAACTTCAGATTCCA+AGG 0.520556 4.2:-37215846 MS.gene50065:CDS
TATCTACTAAGTTGAGACAT+TGG 0.520634 4.2:+37214890 None:intergenic
AAGTTGCACAAGTTCAGTTA+GGG 0.522313 4.2:-37214914 MS.gene50065:CDS
AACTTCAGATTCCAAGGAAG+AGG 0.522917 4.2:-37215840 MS.gene50065:CDS
GGCAGAACCTCCGACTGGAT+TGG 0.526767 4.2:-37216685 MS.gene50065:CDS
GAAAGCCACGAGAGGAAGCG+GGG 0.529030 4.2:+37216500 None:intergenic
AAAGCCACGAGAGGAAGCGG+GGG 0.538579 4.2:+37216501 None:intergenic
ACAGTGGACGACGACCATAT+CGG 0.540286 4.2:+37215399 None:intergenic
ATAAACAGTGGAATATTAGT+CGG 0.544490 4.2:-37216040 MS.gene50065:CDS
TTAGGTTGGAGAATGATGCT+TGG 0.547667 4.2:-37215977 MS.gene50065:CDS
ACTACTATAAACCCATGTGA+TGG 0.549519 4.2:+37215220 None:intergenic
GCCGAGATTAAACAAGCCGC+TGG 0.549761 4.2:-37215713 MS.gene50065:CDS
TCCGGCAAAGAAAATGGCGC+CGG 0.556292 4.2:+37216639 None:intergenic
CCTTGTGCCCTCAACCTCAA+AGG 0.562045 4.2:+37215188 None:intergenic
AGTATCCGACGGGAAAATTG+AGG 0.564384 4.2:-37216758 MS.gene50065:CDS
TTGTCTAAAGGAATTACGAT+TGG 0.569189 4.2:-37215101 MS.gene50065:CDS
AGGTGCAGCTTGTGGTGTTG+TGG 0.570667 4.2:-37215168 MS.gene50065:CDS
GAGGTATTGCTACAATTGGG+TGG 0.571968 4.2:-37215058 MS.gene50065:CDS
GTGGTGAATAGGGTCACTAG+TGG 0.574539 4.2:-37215149 MS.gene50065:CDS
CTACTATAAACCCATGTGAT+GGG 0.576148 4.2:+37215221 None:intergenic
TTGCCGGCAGAACCTCCGAC+TGG 0.576660 4.2:-37216690 MS.gene50065:CDS
TGGCTAAGACTCCAACGGCT+AGG 0.579484 4.2:+37215930 None:intergenic
ATATGACGAACTGCGGGTGT+AGG 0.580443 4.2:+37215605 None:intergenic
GAAACCCATGAGTAAGGCTC+CGG 0.584696 4.2:+37216621 None:intergenic
TTGGTGCAGGACCCATCACA+TGG 0.585356 4.2:-37215232 MS.gene50065:CDS
CCACGATGGCTCGTAATGAG+AGG 0.586462 4.2:-37215896 MS.gene50065:CDS
CGACAAAACGGCCAAACATG+AGG 0.587511 4.2:+37216581 None:intergenic
CTTTCTCACTTCTTTCCCAG+AGG 0.589254 4.2:-37216482 MS.gene50065:intron
ACAGATATTGGTGTTATGAG+TGG 0.592393 4.2:-37216811 MS.gene50065:intron
CCTTCAGTAATCCTAGCCGT+TGG 0.594994 4.2:-37215941 MS.gene50065:CDS
AGGGCACAAGGTGCAGCTTG+TGG 0.595043 4.2:-37215176 MS.gene50065:CDS
CCATCGTGGTGACTCTGGCA+TGG 0.596487 4.2:+37215910 None:intergenic
CCACTGTTACTCACTAGTGT+TGG 0.601446 4.2:-37215383 MS.gene50065:CDS
CCAAGGAAGAGGCTCAGCTA+AGG 0.609894 4.2:-37215829 MS.gene50065:intron
GAGACCTTAAAGTATCCGAC+GGG 0.613965 4.2:-37216768 MS.gene50065:CDS
TTGAATGATCGATGATCGTA+AGG 0.614986 4.2:+37215324 None:intergenic
CAAAACTACAGCGTCTACAC+CGG 0.619548 4.2:+37215541 None:intergenic
GGGAAAGATAGTTGAAGCAA+AGG 0.622531 4.2:-37217167 MS.gene50065:CDS
ATTACAATATGACGAACTGC+GGG 0.625794 4.2:+37215599 None:intergenic
AGAGACCTTAAAGTATCCGA+CGG 0.628792 4.2:-37216769 MS.gene50065:CDS
CAAGGTCTTAACAAATCCAA+CGG 0.634572 4.2:+37215451 None:intergenic
AGTTGCTATACTCAATCCAA+TGG 0.639610 4.2:+37215283 None:intergenic
TGGCATGGCTAAGACTCCAA+CGG 0.641928 4.2:+37215925 None:intergenic
AATGGCGCCGGCAAACACGA+TGG 0.644723 4.2:+37216651 None:intergenic
CCAACGGCTAGGATTACTGA+AGG 0.646658 4.2:+37215941 None:intergenic
CCTCTCATTACGAGCCATCG+TGG 0.646747 4.2:+37215896 None:intergenic
TGGAGAATGATGCTTGGAGT+AGG 0.648761 4.2:-37215971 MS.gene50065:CDS
GGTGAATAGGGTCACTAGTG+GGG 0.657688 4.2:-37215147 MS.gene50065:CDS
ATATTGTAATAGCTGCACTA+GGG 0.658336 4.2:-37215586 MS.gene50065:CDS
AGAAGTGAGAAAGCCACGAG+AGG 0.660349 4.2:+37216492 None:intergenic
TATTACAATATGACGAACTG+CGG 0.663026 4.2:+37215598 None:intergenic
AATCGTAATTCCTTTAGACA+AGG 0.664820 4.2:+37215103 None:intergenic
TGGTGCAGGACCCATCACAT+GGG 0.673212 4.2:-37215231 MS.gene50065:CDS
GCAATCTTCAGGTATTCCAG+CGG 0.674448 4.2:+37215697 None:intergenic
AGTAGCCACTAAAATAAACA+AGG 0.678884 4.2:+37215433 None:intergenic
TATTGTGTCAAGATGAGTGA+GGG 0.685265 4.2:-37217187 None:intergenic
CCAACACTAGTGAGTAACAG+TGG 0.692907 4.2:+37215383 None:intergenic
GACTTCAGCGGTATAGACTG+GGG 0.705438 4.2:+37216525 None:intergenic
ACGACGACCAATCCAGTCGG+AGG 0.711720 4.2:+37216678 None:intergenic
GTAACGACGACCAATCCAGT+CGG 0.738715 4.2:+37216675 None:intergenic
ATTATGCTTCCAGAAACACA+AGG 0.739677 4.2:-37215023 MS.gene50065:CDS
CCATGCCAGAGTCACCACGA+TGG 0.743650 4.2:-37215910 MS.gene50065:CDS
ATATTGTGTCAAGATGAGTG+AGG 0.744896 4.2:-37217188 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATATAATATGAGA+TGG + chr4.2:37215056-37215075 None:intergenic 10.0%
!! ATAAATAACTCTTATAAAAC+TGG - chr4.2:37215785-37215804 MS.gene50065:intron 15.0%
!!! AATGCATAATTTCTTTTAAA+AGG + chr4.2:37215877-37215896 None:intergenic 15.0%
!!! TATTTTTTTGTCGATAAAAT+AGG - chr4.2:37216332-37216351 MS.gene50065:intron 15.0%
!!! TTTTTTATCTCTATTTATCA+AGG + chr4.2:37215747-37215766 None:intergenic 15.0%
!! ATAACAAGAGGATAAAATAT+TGG + chr4.2:37215203-37215222 None:intergenic 20.0%
!! GAGATAAAAAAAAGTAAAAG+TGG - chr4.2:37215756-37215775 MS.gene50065:intron 20.0%
!! GATAGAATAGTAAATTTCAA+TGG - chr4.2:37215819-37215838 MS.gene50065:intron 20.0%
!! TCAAAACTATCACTTAAATT+AGG - chr4.2:37216076-37216095 MS.gene50065:intron 20.0%
!! TCAAATTGATCATTTATTCT+CGG + chr4.2:37216272-37216291 None:intergenic 20.0%
!! TCATAATACACGATAATATA+GGG - chr4.2:37215964-37215983 MS.gene50065:CDS 20.0%
!! TTCATAATACACGATAATAT+AGG - chr4.2:37215963-37215982 MS.gene50065:CDS 20.0%
!!! GTGCTATATTGTTTTATTAA+TGG - chr4.2:37215128-37215147 MS.gene50065:CDS 20.0%
!!! TTTTCATTCATAATAACAAG+AGG + chr4.2:37215215-37215234 None:intergenic 20.0%
! AACTATCACTTAAATTAGGT+TGG - chr4.2:37216080-37216099 MS.gene50065:intron 25.0%
! ATAAACAGTGGAATATTAGT+CGG - chr4.2:37216031-37216050 MS.gene50065:CDS 25.0%
! ATTCAAACACAAAGCTAAAT+TGG - chr4.2:37216764-37216783 MS.gene50065:CDS 25.0%
! CAAGTAAAAGTTAAAAACAC+TGG - chr4.2:37216412-37216431 MS.gene50065:intron 25.0%
! CATAATACACGATAATATAG+GGG - chr4.2:37215965-37215984 MS.gene50065:CDS 25.0%
! GAGAAAATCAAAGAATACTA+AGG - chr4.2:37217113-37217132 MS.gene50065:CDS 25.0%
! GATTCTATATGCAATATATG+TGG + chr4.2:37215917-37215936 None:intergenic 25.0%
! TAAATTTCAATGGATGTTAG+TGG - chr4.2:37215829-37215848 MS.gene50065:intron 25.0%
! TTCAAACACAAAGCTAAATT+GGG - chr4.2:37216765-37216784 MS.gene50065:CDS 25.0%
! TTTACCATATCCAAGTAAAA+TGG + chr4.2:37215020-37215039 None:intergenic 25.0%
!! GTTAGTGGAAAATTTGTTTA+GGG - chr4.2:37215844-37215863 MS.gene50065:CDS 25.0%
!! GTTTCTCTTTGAAGAAAATT+TGG + chr4.2:37215092-37215111 None:intergenic 25.0%
!! TCTTTGAAGAAAATTTGGAT+AGG + chr4.2:37215087-37215106 None:intergenic 25.0%
!! TGTTAGTGGAAAATTTGTTT+AGG - chr4.2:37215843-37215862 MS.gene50065:CDS 25.0%
!! TTTTCAAAGCTCGTTTATTA+TGG - chr4.2:37215639-37215658 MS.gene50065:CDS 25.0%
!!! AAAGCATACTTGTTTCTTTT+AGG + chr4.2:37214968-37214987 None:intergenic 25.0%
!!! GGAGATTTTTTAGAAGTTAA+TGG - chr4.2:37215686-37215705 MS.gene50065:CDS 25.0%
!!! TAAGACCTTGTTTATTTTAG+TGG - chr4.2:37216633-37216652 MS.gene50065:CDS 25.0%
!!! TTAATTGATTTGATATCTGC+AGG - chr4.2:37216003-37216022 MS.gene50065:CDS 25.0%
AAAGTTAAAAACACTGGTGA+AGG - chr4.2:37216418-37216437 MS.gene50065:intron 30.0%
AATCGTAATTCCTTTAGACA+AGG + chr4.2:37216971-37216990 None:intergenic 30.0%
AGGTAAAACACTTGAAGAAA+TGG - chr4.2:37217068-37217087 MS.gene50065:CDS 30.0%
AGTAGCCACTAAAATAAACA+AGG + chr4.2:37216641-37216660 None:intergenic 30.0%
ATATTGTAATAGCTGCACTA+GGG - chr4.2:37216485-37216504 MS.gene50065:CDS 30.0%
TAGTCCTACAATCTTCAAAA+AGG - chr4.2:37216555-37216574 MS.gene50065:CDS 30.0%
TATGTAGCAACTTTCTCAAT+TGG - chr4.2:37216820-37216839 MS.gene50065:intron 30.0%
TATTACAATATGACGAACTG+CGG + chr4.2:37216476-37216495 None:intergenic 30.0%
TTGTCTAAAGGAATTACGAT+TGG - chr4.2:37216970-37216989 MS.gene50065:intron 30.0%
! AAGCCTCTTTTGGTAAAATT+TGG - chr4.2:37217091-37217110 MS.gene50065:CDS 30.0%
! ACTTCCATTTTACTTGGATA+TGG - chr4.2:37215013-37215032 MS.gene50065:CDS 30.0%
! ACTTTTATGTTAGACCGATA+TGG - chr4.2:37216658-37216677 MS.gene50065:CDS 30.0%
! GTAGTGAAATTTTTCCTTTG+AGG - chr4.2:37216869-37216888 MS.gene50065:intron 30.0%
! TCTCCAAATTTTACCAAAAG+AGG + chr4.2:37217097-37217116 None:intergenic 30.0%
! TTTCTTTTAGGCTTCTTTTG+TGG + chr4.2:37214956-37214975 None:intergenic 30.0%
!!! AAATTTTTCCTTTGAGGTTG+AGG - chr4.2:37216875-37216894 MS.gene50065:intron 30.0%
!!! AATTTTTCCTTTGAGGTTGA+GGG - chr4.2:37216876-37216895 MS.gene50065:intron 30.0%
!!! CATTTTTTTCAACAAGCTTC+CGG - chr4.2:37216511-37216530 MS.gene50065:CDS 30.0%
AACATGAGGAAGTTGTAGTT+TGG + chr4.2:37215479-37215498 None:intergenic 35.0%
AACTACAACTTCCTCATGTT+TGG - chr4.2:37215479-37215498 MS.gene50065:CDS 35.0%
AAGTTGCACAAGTTCAGTTA+GGG - chr4.2:37217157-37217176 MS.gene50065:CDS 35.0%
ACACGTCATCATACAGATAT+TGG - chr4.2:37215248-37215267 MS.gene50065:CDS 35.0%
ACTACTATAAACCCATGTGA+TGG + chr4.2:37216854-37216873 None:intergenic 35.0%
AGTTGCTATACTCAATCCAA+TGG + chr4.2:37216791-37216810 None:intergenic 35.0%
ATCAACATCTACTCTCTCAT+TGG - chr4.2:37215350-37215369 MS.gene50065:CDS 35.0%
ATTACAATATGACGAACTGC+GGG + chr4.2:37216475-37216494 None:intergenic 35.0%
ATTATGCTTCCAGAAACACA+AGG - chr4.2:37217048-37217067 MS.gene50065:intron 35.0%
CAACAAAACTTCAGATTCCA+AGG - chr4.2:37216225-37216244 MS.gene50065:intron 35.0%
CAAGGTCTTAACAAATCCAA+CGG + chr4.2:37216623-37216642 None:intergenic 35.0%
CATATTGTAATAGCTGCACT+AGG - chr4.2:37216484-37216503 MS.gene50065:CDS 35.0%
CTACAATCTTCAAAAAGGCT+GGG - chr4.2:37216560-37216579 MS.gene50065:CDS 35.0%
CTACTATAAACCCATGTGAT+GGG + chr4.2:37216853-37216872 None:intergenic 35.0%
TAAAGAAGAGACTAACCTCT+GGG + chr4.2:37215607-37215626 None:intergenic 35.0%
TCCAAGTAAAATGGAAGTCA+TGG + chr4.2:37215011-37215030 None:intergenic 35.0%
TCTAAAGGAATTACGATTGG+TGG - chr4.2:37216973-37216992 MS.gene50065:intron 35.0%
TTAAAGAAGAGACTAACCTC+TGG + chr4.2:37215608-37215627 None:intergenic 35.0%
TTGAATGATCGATGATCGTA+AGG + chr4.2:37216750-37216769 None:intergenic 35.0%
TTGTAGCAATACCTCCAAAT+AGG + chr4.2:37217008-37217027 None:intergenic 35.0%
! ACTTTTCTGTCCTTGTCTAA+AGG - chr4.2:37216958-37216977 MS.gene50065:intron 35.0%
! AGTGTTTTACCTTGTGTTTC+TGG + chr4.2:37217060-37217079 None:intergenic 35.0%
! TCCATGACTTCCATTTTACT+TGG - chr4.2:37215007-37215026 MS.gene50065:CDS 35.0%
!! ACAGATATTGGTGTTATGAG+TGG - chr4.2:37215260-37215279 MS.gene50065:CDS 35.0%
!! TTGGAGGTATTGCTACAATT+GGG - chr4.2:37217010-37217029 MS.gene50065:intron 35.0%
!! TTTGGAGGTATTGCTACAAT+TGG - chr4.2:37217009-37217028 MS.gene50065:intron 35.0%
AACTTCAGATTCCAAGGAAG+AGG - chr4.2:37216231-37216250 MS.gene50065:intron 40.0%
ACAAAGCTAAATTGGGCCAT+TGG - chr4.2:37216772-37216791 MS.gene50065:CDS 40.0%
CAAGTTGCACAAGTTCAGTT+AGG - chr4.2:37217156-37217175 MS.gene50065:CDS 40.0%
CCTACAATCTTCAAAAAGGC+TGG - chr4.2:37216559-37216578 MS.gene50065:CDS 40.0%
CTTAACAAATCCAACGGCTA+TGG + chr4.2:37216617-37216636 None:intergenic 40.0%
GGGAAAGATAGTTGAAGCAA+AGG - chr4.2:37214904-37214923 MS.gene50065:CDS 40.0%
TTCAAAAAGGCTGGGATCAA+CGG - chr4.2:37216568-37216587 MS.gene50065:CDS 40.0%
! AAAACACTGGTGAAGGTGTA+TGG - chr4.2:37216425-37216444 MS.gene50065:intron 40.0%
! AGAGACCTTAAAGTATCCGA+CGG - chr4.2:37215302-37215321 MS.gene50065:CDS 40.0%
! CTGCAGGTTTTCATAAACAG+TGG - chr4.2:37216019-37216038 MS.gene50065:CDS 40.0%
! GAAGAAATGGAAGCCTCTTT+TGG - chr4.2:37217081-37217100 MS.gene50065:CDS 40.0%
! GGTGCATTTTTCCTATTTGG+AGG - chr4.2:37216994-37217013 MS.gene50065:intron 40.0%
! GGTGGTGCATTTTTCCTATT+TGG - chr4.2:37216991-37217010 MS.gene50065:intron 40.0%
! TGCTTTTGCTTGTGCTATGT+TGG - chr4.2:37214982-37215001 MS.gene50065:CDS 40.0%
! TTTTCCCGTCGGATACTTTA+AGG + chr4.2:37215310-37215329 None:intergenic 40.0%
!! CCAGCCTTTTTGAAGATTGT+AGG + chr4.2:37216562-37216581 None:intergenic 40.0%
!! GGGAAAATTGAGGTCTTGTT+AGG - chr4.2:37215323-37215342 MS.gene50065:CDS 40.0%
!! TTAGGTTGGAGAATGATGCT+TGG - chr4.2:37216094-37216113 MS.gene50065:intron 40.0%
!! TTGTGGTGTTGTGGTGAATA+GGG - chr4.2:37216912-37216931 MS.gene50065:intron 40.0%
ACATCGTCGTTGCAATCTTC+AGG + chr4.2:37216388-37216407 None:intergenic 45.0%
AGACTTCAGCGGTATAGACT+GGG + chr4.2:37215550-37215569 None:intergenic 45.0%
AGTATCCGACGGGAAAATTG+AGG - chr4.2:37215313-37215332 MS.gene50065:CDS 45.0%
CAAAACTACAGCGTCTACAC+CGG + chr4.2:37216533-37216552 None:intergenic 45.0%
CCAACACTAGTGAGTAACAG+TGG + chr4.2:37216691-37216710 None:intergenic 45.0%
CCACTGTTACTCACTAGTGT+TGG - chr4.2:37216688-37216707 MS.gene50065:CDS 45.0%
CTAATTGCAACCATAGCCGT+TGG - chr4.2:37216604-37216623 MS.gene50065:CDS 45.0%
CTCGTAATGAGAGGTCGTTT+AGG - chr4.2:37216184-37216203 MS.gene50065:intron 45.0%
CTTTCTCACTTCTTTCCCAG+AGG - chr4.2:37215589-37215608 MS.gene50065:CDS 45.0%
GCAACTTTCTCAATTGGTGC+AGG - chr4.2:37216826-37216845 MS.gene50065:intron 45.0%
GCAATCTTCAGGTATTCCAG+CGG + chr4.2:37216377-37216396 None:intergenic 45.0%
TAAGGCTCCGGCAAAGAAAA+TGG + chr4.2:37215441-37215460 None:intergenic 45.0%
TGGAGAATGATGCTTGGAGT+AGG - chr4.2:37216100-37216119 MS.gene50065:intron 45.0%
TGGTGAATAGGGTCACTAGT+GGG - chr4.2:37216923-37216942 MS.gene50065:intron 45.0%
TGGTGAGAAACCCATGAGTA+AGG + chr4.2:37215459-37215478 None:intergenic 45.0%
! CAAGACCTCAATTTTCCCGT+CGG + chr4.2:37215321-37215340 None:intergenic 45.0%
! CTGTTACTCACTAGTGTTGG+TGG - chr4.2:37216691-37216710 MS.gene50065:CDS 45.0%
! GAGACCTTAAAGTATCCGAC+GGG - chr4.2:37215303-37215322 MS.gene50065:CDS 45.0%
! TCCAGCGGCTTGTTTAATCT+CGG + chr4.2:37216362-37216381 None:intergenic 45.0%
!! ACTCACTAGTGTTGGTGGTA+TGG - chr4.2:37216696-37216715 MS.gene50065:CDS 45.0%
!! CTCATTGGTTCATGTCTTGC+CGG - chr4.2:37215365-37215384 MS.gene50065:CDS 45.0%
!! CTTGTGGTGTTGTGGTGAAT+AGG - chr4.2:37216911-37216930 MS.gene50065:intron 45.0%
!! GAGGTATTGCTACAATTGGG+TGG - chr4.2:37217013-37217032 MS.gene50065:intron 45.0%
!!! ATAAAAAAAAAGTAAATTTT+AGG - chr4.2:37215665-37215684 MS.gene50065:CDS 5.0%
ACAGTGGACGACGACCATAT+CGG + chr4.2:37216675-37216694 None:intergenic 50.0%
AGAAGTGAGAAAGCCACGAG+AGG + chr4.2:37215582-37215601 None:intergenic 50.0%
ATATGACGAACTGCGGGTGT+AGG + chr4.2:37216469-37216488 None:intergenic 50.0%
CCAACGGCTAGGATTACTGA+AGG + chr4.2:37216133-37216152 None:intergenic 50.0%
CCTTCAGTAATCCTAGCCGT+TGG - chr4.2:37216130-37216149 MS.gene50065:intron 50.0%
CGACAAAACGGCCAAACATG+AGG + chr4.2:37215493-37215512 None:intergenic 50.0%
CGTTACACCATCGTGTTTGC+CGG - chr4.2:37215413-37215432 MS.gene50065:CDS 50.0%
GAAACCCATGAGTAAGGCTC+CGG + chr4.2:37215453-37215472 None:intergenic 50.0%
GACTTCAGCGGTATAGACTG+GGG + chr4.2:37215549-37215568 None:intergenic 50.0%
GAGACTTCAGCGGTATAGAC+TGG + chr4.2:37215551-37215570 None:intergenic 50.0%
GGTGAATAGGGTCACTAGTG+GGG - chr4.2:37216924-37216943 MS.gene50065:intron 50.0%
GTAACGACGACCAATCCAGT+CGG + chr4.2:37215399-37215418 None:intergenic 50.0%
GTGGTGAATAGGGTCACTAG+TGG - chr4.2:37216922-37216941 MS.gene50065:intron 50.0%
TGGCATGGCTAAGACTCCAA+CGG + chr4.2:37216149-37216168 None:intergenic 50.0%
TTTGCCGGAGCCTTACTCAT+GGG - chr4.2:37215446-37215465 MS.gene50065:CDS 50.0%
!! ATGTTTGGCCGTTTTGTCGC+CGG - chr4.2:37215494-37215513 MS.gene50065:CDS 50.0%
AATCCAGTCGGAGGTTCTGC+CGG + chr4.2:37215387-37215406 None:intergenic 55.0%
AGAAAGCCACGAGAGGAAGC+GGG + chr4.2:37215575-37215594 None:intergenic 55.0%
AGCATAGCCGATGCCAACTC+CGG + chr4.2:37215516-37215535 None:intergenic 55.0%
CCAAGGAAGAGGCTCAGCTA+AGG - chr4.2:37216242-37216261 MS.gene50065:intron 55.0%
CCACGATGGCTCGTAATGAG+AGG - chr4.2:37216175-37216194 MS.gene50065:intron 55.0%
CCTCTCATTACGAGCCATCG+TGG + chr4.2:37216178-37216197 None:intergenic 55.0%
CCTTAGCTGAGCCTCTTCCT+TGG + chr4.2:37216245-37216264 None:intergenic 55.0%
CCTTGTGCCCTCAACCTCAA+AGG + chr4.2:37216886-37216905 None:intergenic 55.0%
CTTTGCCGGAGCCTTACTCA+TGG - chr4.2:37215445-37215464 MS.gene50065:CDS 55.0%
GAGAAAGCCACGAGAGGAAG+CGG + chr4.2:37215576-37215595 None:intergenic 55.0%
GCCGAGATTAAACAAGCCGC+TGG - chr4.2:37216358-37216377 MS.gene50065:intron 55.0%
TCCGGCAAAGAAAATGGCGC+CGG + chr4.2:37215435-37215454 None:intergenic 55.0%
TGCCAACTCCGGCGACAAAA+CGG + chr4.2:37215505-37215524 None:intergenic 55.0%
TGGCTAAGACTCCAACGGCT+AGG + chr4.2:37216144-37216163 None:intergenic 55.0%
TGGTGCAGGACCCATCACAT+GGG - chr4.2:37216840-37216859 MS.gene50065:intron 55.0%
TTGGTGCAGGACCCATCACA+TGG - chr4.2:37216839-37216858 MS.gene50065:intron 55.0%
TTTGTCGCCGGAGTTGGCAT+CGG - chr4.2:37215506-37215525 MS.gene50065:CDS 55.0%
! AGGTGCAGCTTGTGGTGTTG+TGG - chr4.2:37216903-37216922 MS.gene50065:intron 55.0%
!! CCTTTGAGGTTGAGGGCACA+AGG - chr4.2:37216883-37216902 MS.gene50065:intron 55.0%
AAAGCCACGAGAGGAAGCGG+GGG + chr4.2:37215573-37215592 None:intergenic 60.0%
ACGACGACCAATCCAGTCGG+AGG + chr4.2:37215396-37215415 None:intergenic 60.0%
ACGAGCCATCGTGGTGACTC+TGG + chr4.2:37216169-37216188 None:intergenic 60.0%
AGGGCACAAGGTGCAGCTTG+TGG - chr4.2:37216895-37216914 MS.gene50065:intron 60.0%
CCATCGTGGTGACTCTGGCA+TGG + chr4.2:37216164-37216183 None:intergenic 60.0%
CCATGCCAGAGTCACCACGA+TGG - chr4.2:37216161-37216180 MS.gene50065:intron 60.0%
GAAAGCCACGAGAGGAAGCG+GGG + chr4.2:37215574-37215593 None:intergenic 60.0%
GGCAGAACCTCCGACTGGAT+TGG - chr4.2:37215386-37215405 MS.gene50065:CDS 60.0%
!! AATGGCGCCGGCAAACACGA+TGG + chr4.2:37215423-37215442 None:intergenic 60.0%
!! GCCGGCGCCATTTTCTTTGC+CGG - chr4.2:37215431-37215450 MS.gene50065:CDS 60.0%
GGAAGCGGGGGAGACTTCAG+CGG + chr4.2:37215561-37215580 None:intergenic 65.0%
TTGCCGGCAGAACCTCCGAC+TGG - chr4.2:37215381-37215400 MS.gene50065:CDS 65.0%
!! GGCCGTTTTGTCGCCGGAGT+TGG - chr4.2:37215500-37215519 MS.gene50065:CDS 65.0%
GTCTCCCCCGCTTCCTCTCG+TGG - chr4.2:37215566-37215585 MS.gene50065:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 37214896 37217197 37214896 ID=MS.gene50065
chr4.2 mRNA 37214896 37217197 37214896 ID=MS.gene50065.t1;Parent=MS.gene50065
chr4.2 exon 37217059 37217197 37217059 ID=MS.gene50065.t1.exon1;Parent=MS.gene50065.t1
chr4.2 CDS 37217059 37217197 37217059 ID=cds.MS.gene50065.t1;Parent=MS.gene50065.t1
chr4.2 exon 37216483 37216829 37216483 ID=MS.gene50065.t1.exon2;Parent=MS.gene50065.t1
chr4.2 CDS 37216483 37216829 37216483 ID=cds.MS.gene50065.t1;Parent=MS.gene50065.t1
chr4.2 exon 37215830 37216068 37215830 ID=MS.gene50065.t1.exon3;Parent=MS.gene50065.t1
chr4.2 CDS 37215830 37216068 37215830 ID=cds.MS.gene50065.t1;Parent=MS.gene50065.t1
chr4.2 exon 37214896 37215739 37214896 ID=MS.gene50065.t1.exon4;Parent=MS.gene50065.t1
chr4.2 CDS 37214896 37215739 37214896 ID=cds.MS.gene50065.t1;Parent=MS.gene50065.t1
Gene Sequence

>MS.gene50065

ATGAGTGAGGGAAAGATAGTTGAAGCAAAGGCTCAAAAAAATCTTCAAGATTTTGATCCACAAAAGAAGCCTAAAAGAAACAAGTATGCTTTTGCTTGTGCTATGTTGGCTTCCATGACTTCCATTTTACTTGGATATGGTAAATAATTACTATACACCATCTCATATTATATTTTATTTATTATACTCCTATCCAAATTTTCTTCAAAGAGAAACAAGTATGATTTTGCTTGTGCTATATTGTTTTATTAATGGTAAATATTAGTACGTTAATTGTTACGTTAGTATTCTCTTTAATCATTTGCCAATATTTTATCCTCTTGTTATTATGAATGAAAAATGTTGATTTTTGACACGTCATCATACAGATATTGGTGTTATGAGTGGAGCAGCAATCTACATACAAAGAGACCTTAAAGTATCCGACGGGAAAATTGAGGTCTTGTTAGGAATCATCAACATCTACTCTCTCATTGGTTCATGTCTTGCCGGCAGAACCTCCGACTGGATTGGTCGTCGTTACACCATCGTGTTTGCCGGCGCCATTTTCTTTGCCGGAGCCTTACTCATGGGTTTCTCACCAAACTACAACTTCCTCATGTTTGGCCGTTTTGTCGCCGGAGTTGGCATCGGCTATGCTCTCATGATTGCCCCAGTCTATACCGCTGAAGTCTCCCCCGCTTCCTCTCGTGGCTTTCTCACTTCTTTCCCAGAGGTTAGTCTCTTCTTTAATTTATCTATTTTTTTCAAAGCTCGTTTATTATGGATTATAAAAAAAAAGTAAATTTTAGGAGATTTTTTAGAAGTTAATGGAACATTTGATAGAATAGTAAATTCTCAATTGAATACCTTGATAAATAGAGATAAAAAAAAGTAAAAGTGGACAAACATAAATAACTCTTATAAAACTGGTGCAATAATTTGATAGAATAGTAAATTTCAATGGATGTTAGTGGAAAATTTGTTTAGGGTACATAGCCTTTTAAAAGAAATTATGCATTTCTGTTTTTTTTTTTTTCCACATATATTGCATATAGAATCTTTACTAGTAGTATATCTATTTAATATTCATAATACACGATAATATAGGGGTAAAAATTTAACATTTTAATTGATTTGATATCTGCAGGTTTTCATAAACAGTGGAATATTAGTCGGATACATATCAAACTATGCATTTTCAAAACTATCACTTAAATTAGGTTGGAGAATGATGCTTGGAGTAGGTGCAATTCCTTCAGTAATCCTAGCCGTTGGAGTCTTAGCCATGCCAGAGTCACCACGATGGCTCGTAATGAGAGGTCGTTTAGGAGACGCAATAAAAGTACTCAACAAAACTTCAGATTCCAAGGAAGAGGCTCAGCTAAGGTTAGCCGAGAATAAATGATCAATTTGATTGTACTGTACTATCTTTATTTTAACATTTGAATGACGCTTATTTTTTTGTCGATAAAATAGGTTAGCCGAGATTAAACAAGCCGCTGGAATACCTGAAGATTGCAACGACGATGTTGTTCAAGTAAAAGTTAAAAACACTGGTGAAGGTGTATGGAAAGAGCTTTTTCTTCATCCTACACCCGCAGTTCGTCATATTGTAATAGCTGCACTAGGGATTCATTTTTTTCAACAAGCTTCCGGTGTAGACGCTGTAGTTTTGTATAGTCCTACAATCTTCAAAAAGGCTGGGATCAACGGTGATACGCATCTTCTAATTGCAACCATAGCCGTTGGATTTGTTAAGACCTTGTTTATTTTAGTGGCTACTTTTATGTTAGACCGATATGGTCGTCGTCCACTGTTACTCACTAGTGTTGGTGGTATGGTAGTCTCGCTTCTCACACTCGCTGTCAGCCTTACGATCATCGATCATTCAAACACAAAGCTAAATTGGGCCATTGGATTGAGTATAGCAACTGTTTTGTCATATGTAGCAACTTTCTCAATTGGTGCAGGACCCATCACATGGGTTTATAGTAGTGAAATTTTTCCTTTGAGGTTGAGGGCACAAGGTGCAGCTTGTGGTGTTGTGGTGAATAGGGTCACTAGTGGGGTTATTTCAATGACTTTTCTGTCCTTGTCTAAAGGAATTACGATTGGTGGTGCATTTTTCCTATTTGGAGGTATTGCTACAATTGGGTGGATATTTTTTTATATTATGCTTCCAGAAACACAAGGTAAAACACTTGAAGAAATGGAAGCCTCTTTTGGTAAAATTTGGAGAAAATCAAAGAATACTAAGGAAGCTGAAAAAGACAATGCTCAAGTTGCACAAGTTCAGTTAGGGACCAATGTCTCAACTTAG

Protein sequence

>MS.gene50065.t1

MSEGKIVEAKAQKNLQDFDPQKKPKRNKYAFACAMLASMTSILLGYDIGVMSGAAIYIQRDLKVSDGKIEVLLGIINIYSLIGSCLAGRTSDWIGRRYTIVFAGAIFFAGALLMGFSPNYNFLMFGRFVAGVGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINSGILVGYISNYAFSKLSLKLGWRMMLGVGAIPSVILAVGVLAMPESPRWLVMRGRLGDAIKVLNKTSDSKEEAQLRLAEIKQAAGIPEDCNDDVVQVKVKNTGEGVWKELFLHPTPAVRHIVIAALGIHFFQQASGVDAVVLYSPTIFKKAGINGDTHLLIATIAVGFVKTLFILVATFMLDRYGRRPLLLTSVGGMVVSLLTLAVSLTIIDHSNTKLNWAIGLSIATVLSYVATFSIGAGPITWVYSSEIFPLRLRAQGAACGVVVNRVTSGVISMTFLSLSKGITIGGAFFLFGGIATIGWIFFYIMLPETQGKTLEEMEASFGKIWRKSKNTKEAEKDNAQVAQVQLGTNVST