AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058372

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058372.t1 MTR_3g008170 97.451 510 13 0 1 510 1 510 0.0 1011
MS.gene058372.t1 MTR_3g008160 75.449 501 120 3 1 500 1 499 0.0 780
MS.gene058372.t1 MTR_3g008160 77.162 451 102 1 50 500 1 450 0.0 727
MS.gene058372.t1 MTR_0204s0020 56.173 486 209 4 13 498 11 492 0.0 572
MS.gene058372.t1 MTR_0204s0020 55.761 486 208 5 13 498 11 489 0.0 563
MS.gene058372.t1 MTR_5g082540 56.496 508 214 5 1 505 1 504 0.0 562
MS.gene058372.t1 MTR_5g006070 54.125 497 223 5 16 509 15 509 0.0 561
MS.gene058372.t1 MTR_5g094760 55.694 483 210 4 16 498 20 498 0.0 552
MS.gene058372.t1 MTR_7g091690 55.487 483 211 4 16 498 20 498 0.0 547
MS.gene058372.t1 MTR_4g116770 52.834 494 226 5 13 506 215 701 0.0 545
MS.gene058372.t1 MTR_4g116790 52.716 497 230 5 13 509 17 508 0.0 545
MS.gene058372.t1 MTR_1g038630 56.088 501 213 5 1 498 1 497 0.0 544
MS.gene058372.t1 MTR_0204s0040 52.834 494 226 5 13 506 19 505 0.0 544
MS.gene058372.t1 MTR_1g104750 53.614 498 227 4 1 496 1 496 0.0 532
MS.gene058372.t1 MTR_3g074410 53.239 494 223 6 18 508 20 508 0.0 531
MS.gene058372.t1 MTR_1g104770 53.908 499 225 5 1 496 1 497 0.0 529
MS.gene058372.t1 MTR_4g091370 56.907 485 204 3 17 498 17 499 0.0 527
MS.gene058372.t1 MTR_3g093010 55.511 499 215 5 11 505 10 505 0.0 527
MS.gene058372.t1 MTR_3g074390 53.402 485 219 5 17 498 22 502 0.0 526
MS.gene058372.t1 MTR_1g104780 54.752 484 210 7 29 506 28 508 0.0 525
MS.gene058372.t1 MTR_5g041550 54.669 514 226 5 1 510 1 511 0.0 525
MS.gene058372.t1 MTR_0009s0370 51.267 513 241 6 1 509 1 508 0.0 518
MS.gene058372.t1 MTR_5g006070 53.780 463 209 5 50 509 1 461 0.0 517
MS.gene058372.t1 MTR_1g038600 54.000 500 207 6 1 498 1 479 2.92e-177 508
MS.gene058372.t1 MTR_6g087040 50.622 482 234 4 18 498 21 499 1.73e-171 493
MS.gene058372.t1 MTR_6g088375 50.622 482 234 4 18 498 21 499 1.73e-171 493
MS.gene058372.t1 MTR_3g074270 48.889 495 230 5 4 498 5 476 3.80e-171 491
MS.gene058372.t1 MTR_8g102860 49.898 489 241 4 18 505 21 506 3.55e-170 490
MS.gene058372.t1 MTR_3g023480 50.503 497 240 4 17 509 15 509 1.81e-169 488
MS.gene058372.t1 MTR_4g090600 55.000 500 219 4 2 498 3 499 1.50e-168 486
MS.gene058372.t1 MTR_3g007910 52.130 493 196 7 11 498 10 467 6.23e-168 483
MS.gene058372.t1 MTR_3g093060 53.319 452 204 4 50 496 1 450 1.91e-159 461
MS.gene058372.t1 MTR_8g102860 49.891 457 225 4 50 505 1 454 6.81e-156 452
MS.gene058372.t1 MTR_4g116790 50.000 352 172 4 13 364 17 364 8.80e-124 367
MS.gene058372.t1 MTR_3g074380 52.958 355 160 5 17 370 20 368 1.07e-123 367
MS.gene058372.t1 MTR_3g074320 50.774 323 152 5 188 506 20 339 3.11e-112 336
MS.gene058372.t1 MTR_3g074340 50.464 323 153 5 188 506 20 339 1.01e-111 335
MS.gene058372.t1 MTR_3g074370 50.464 323 153 5 188 507 20 338 2.28e-111 334
MS.gene058372.t1 MTR_3g074400 40.879 455 212 9 50 482 1 420 3.99e-104 318
MS.gene058372.t1 MTR_8g103500 28.980 490 314 10 12 490 7 473 1.82e-55 193
MS.gene058372.t1 MTR_6g088450 29.828 466 294 11 22 477 57 499 3.18e-55 193
MS.gene058372.t1 MTR_3g116240 29.938 481 291 13 27 485 32 488 2.63e-54 191
MS.gene058372.t1 MTR_4g069500 27.006 511 332 9 13 505 21 508 3.34e-52 185
MS.gene058372.t1 MTR_8g077890 29.470 509 314 10 11 500 7 489 4.23e-52 184
MS.gene058372.t1 MTR_4g072030 28.689 488 305 14 27 496 31 493 3.07e-50 180
MS.gene058372.t1 MTR_3g084110 27.812 489 320 11 22 505 27 487 1.41e-48 175
MS.gene058372.t1 MTR_4g069500 27.442 430 292 5 94 505 31 458 2.66e-48 174
MS.gene058372.t1 MTR_1g116660 26.789 489 330 11 22 505 34 499 6.63e-47 171
MS.gene058372.t1 MTR_2g013310 27.824 478 309 12 22 490 52 502 7.88e-47 171
MS.gene058372.t1 MTR_5g075300 27.530 494 316 10 18 491 14 485 2.27e-46 169
MS.gene058372.t1 MTR_5g096000 52.632 171 62 2 11 181 10 161 5.51e-46 163
MS.gene058372.t1 MTR_5g096000 59.836 122 49 0 377 498 177 298 4.63e-39 144
MS.gene058372.t1 MTR_7g446340 25.562 489 329 11 11 491 45 506 6.58e-46 168
MS.gene058372.t1 MTR_6g007340 25.562 489 329 11 11 491 45 506 6.58e-46 168
MS.gene058372.t1 MTR_2g013310 30.357 392 257 9 108 490 45 429 2.43e-45 165
MS.gene058372.t1 MTR_1g116650 26.721 494 317 11 22 508 77 532 1.05e-44 165
MS.gene058372.t1 MTR_7g005910 26.653 484 318 11 22 496 32 487 1.61e-44 164
MS.gene058372.t1 MTR_3g074330 53.846 156 63 3 4 152 5 158 8.06e-44 153
MS.gene058372.t1 MTR_3g074360 53.846 156 63 3 4 152 5 158 8.06e-44 153
MS.gene058372.t1 MTR_3g074310 53.846 156 63 3 4 152 5 158 2.08e-43 152
MS.gene058372.t1 MTR_5g077580 26.362 569 294 15 22 496 25 562 5.70e-43 161
MS.gene058372.t1 MTR_4g077740 26.737 475 312 10 24 485 46 497 1.27e-41 156
MS.gene058372.t1 MTR_5g019870 29.257 417 264 8 100 491 72 482 3.34e-39 149
MS.gene058372.t1 MTR_8g077310 26.947 475 306 11 18 485 42 482 9.42e-38 145
MS.gene058372.t1 MTR_1g022315 27.273 473 299 15 24 486 49 486 1.23e-37 144
MS.gene058372.t1 MTR_1g022315 27.990 393 259 9 103 486 10 387 1.25e-37 142
MS.gene058372.t1 MTR_2g048720 31.965 341 201 8 22 355 25 341 2.48e-36 142
MS.gene058372.t1 MTR_6g018790 26.931 479 310 14 12 486 98 540 2.66e-36 142
MS.gene058372.t1 MTR_7g082270 26.205 477 318 12 11 486 57 500 3.40e-36 140
MS.gene058372.t1 MTR_8g077310 28.571 385 254 7 108 485 15 385 5.05e-36 138
MS.gene058372.t1 MTR_2g049020 31.304 345 199 10 22 354 25 343 1.23e-35 140
MS.gene058372.t1 MTR_8g077300 25.786 477 311 10 17 485 33 474 3.23e-35 137
MS.gene058372.t1 MTR_4g118610 25.786 477 318 11 11 485 41 483 2.10e-34 135
MS.gene058372.t1 MTR_2g020710 27.654 358 236 9 134 485 51 391 1.28e-33 131
MS.gene058372.t1 MTR_2g020710 27.654 358 236 9 134 485 140 480 2.78e-33 132
MS.gene058372.t1 MTR_5g020270 26.271 472 303 12 23 485 50 485 1.05e-32 130
MS.gene058372.t1 MTR_5g020270 27.226 393 249 9 108 485 15 385 3.12e-32 127
MS.gene058372.t1 MTR_4g069500 27.419 310 197 8 205 490 3 308 1.18e-31 125
MS.gene058372.t1 MTR_4g013205 25.189 397 276 10 94 485 89 469 1.22e-31 127
MS.gene058372.t1 MTR_7g113970 26.050 357 250 6 130 485 149 492 2.33e-31 127
MS.gene058372.t1 MTR_7g113960 26.554 354 242 7 134 485 118 455 3.07e-31 126
MS.gene058372.t1 MTR_2g026160 28.612 353 219 8 22 363 26 356 4.30e-31 127
MS.gene058372.t1 MTR_0064s0040 46.479 142 62 3 12 152 13 141 4.44e-31 118
MS.gene058372.t1 MTR_7g094450 25.653 421 299 7 67 486 64 471 1.01e-30 125
MS.gene058372.t1 MTR_7g082270 26.730 419 274 10 11 429 57 442 1.89e-30 124
MS.gene058372.t1 MTR_3g080240 23.377 462 321 11 28 486 98 529 1.28e-28 119
MS.gene058372.t1 MTR_1g114280 37.952 166 82 3 339 502 11 157 2.88e-28 110
MS.gene058372.t1 MTR_1g038620 37.222 180 86 4 191 362 29 189 2.18e-27 108
MS.gene058372.t1 MTR_5g020270 24.947 469 292 13 23 485 50 464 4.00e-27 114
MS.gene058372.t1 MTR_6g087910 24.165 389 282 7 98 485 107 483 4.36e-27 114
MS.gene058372.t1 MTR_7g094110 27.273 352 240 8 136 485 135 472 5.66e-27 114
MS.gene058372.t1 MTR_2g026140 28.406 345 204 11 29 363 30 341 1.23e-26 114
MS.gene058372.t1 MTR_8g077310 27.066 351 225 8 18 367 42 362 1.88e-25 108
MS.gene058372.t1 MTR_4g064820 28.101 395 249 11 23 402 96 470 7.95e-25 107
MS.gene058372.t1 MTR_4g118610 25.307 407 268 11 11 415 41 413 4.21e-22 99.4
MS.gene058372.t1 MTR_2g020710 25.223 337 229 9 85 415 91 410 1.97e-20 94.0
MS.gene058372.t1 MTR_2g020710 26.829 287 187 9 134 414 140 409 3.13e-20 93.6
MS.gene058372.t1 MTR_5g024740 28.455 246 153 6 21 264 2 226 5.61e-19 90.9
MS.gene058372.t1 MTR_7g094110 25.284 352 227 9 136 485 135 452 1.89e-18 88.2
MS.gene058372.t1 MTR_7g113960 27.602 221 148 4 136 355 120 329 6.54e-18 86.3
MS.gene058372.t1 MTR_2g020710 27.572 243 154 8 134 370 140 366 1.76e-17 84.7
MS.gene058372.t1 MTR_7g113970 27.391 230 155 4 130 358 149 367 3.80e-17 84.0
MS.gene058372.t1 MTR_3g118530 29.947 187 128 3 91 276 54 238 4.26e-17 85.1
MS.gene058372.t1 MTR_3g118530 31.737 167 111 3 91 256 54 218 1.20e-16 83.6
MS.gene058372.t1 MTR_8g073100 31.214 173 116 3 90 261 53 223 1.71e-16 83.2
MS.gene058372.t1 MTR_8g073100 29.515 227 142 4 268 482 479 699 1.13e-13 74.3
MS.gene058372.t1 MTR_3g116060 33.333 156 101 3 107 261 68 221 1.09e-15 80.5
MS.gene058372.t1 MTR_3g116060 27.350 234 143 7 266 482 488 711 5.86e-11 65.5
MS.gene058372.t1 MTR_5g044910 28.324 173 121 3 90 261 53 223 3.02e-15 79.0
MS.gene058372.t1 MTR_1g093115 55.556 63 27 1 161 222 1 63 3.23e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058372.t1 AT5G61520 63.821 492 168 4 15 500 16 503 0.0 631
MS.gene058372.t1 AT5G61520 63.319 458 158 4 49 500 2 455 0.0 580
MS.gene058372.t1 AT4G02050 56.740 497 207 5 13 509 17 505 0.0 578
MS.gene058372.t1 AT4G02050 56.740 497 207 5 13 509 17 505 0.0 578
MS.gene058372.t1 AT5G26340 56.225 498 212 6 16 509 16 511 0.0 566
MS.gene058372.t1 AT3G19930 56.385 509 214 5 1 507 1 503 0.0 556
MS.gene058372.t1 AT3G19930 56.385 509 214 5 1 507 1 503 0.0 556
MS.gene058372.t1 AT1G11260 55.888 501 216 3 1 498 1 499 0.0 551
MS.gene058372.t1 AT3G19940 53.924 497 218 5 19 507 21 514 0.0 548
MS.gene058372.t1 AT1G50310 54.694 490 215 4 19 506 21 505 0.0 542
MS.gene058372.t1 AT4G21480 56.939 490 204 4 12 498 12 497 0.0 540
MS.gene058372.t1 AT5G23270 55.579 484 210 4 16 496 17 498 0.0 532
MS.gene058372.t1 AT1G34580 52.277 505 231 6 4 502 5 505 0.0 532
MS.gene058372.t1 AT1G77210 49.281 487 243 4 18 503 21 504 2.10e-172 496
MS.gene058372.t1 AT1G77210 49.281 487 243 4 18 503 21 504 2.10e-172 496
MS.gene058372.t1 AT1G34580 52.070 459 210 6 50 502 1 455 1.24e-168 484
MS.gene058372.t1 AT5G26250 47.273 495 256 5 16 509 15 505 3.77e-159 462
MS.gene058372.t1 AT1G07340 50.301 499 240 6 1 496 1 494 4.82e-154 449
MS.gene058372.t1 AT3G05960 45.859 495 263 5 16 509 14 504 3.18e-152 444
MS.gene058372.t1 AT1G50310 53.221 357 160 4 152 506 11 362 6.15e-132 388
MS.gene058372.t1 AT1G77210 49.008 353 176 4 152 503 6 355 1.35e-117 350
MS.gene058372.t1 AT2G16120 29.344 518 328 7 7 506 10 507 8.17e-59 203
MS.gene058372.t1 AT2G16130 29.134 508 322 7 7 496 10 497 3.05e-56 196
MS.gene058372.t1 AT3G18830 29.032 496 306 10 13 489 31 499 1.12e-54 192
MS.gene058372.t1 AT4G36670 30.061 489 296 13 25 491 18 482 1.49e-52 186
MS.gene058372.t1 AT2G18480 30.021 473 285 13 37 488 36 483 2.45e-50 180
MS.gene058372.t1 AT2G43330 26.681 476 320 9 22 491 30 482 1.93e-45 167
MS.gene058372.t1 AT3G05165 26.316 475 316 8 12 485 19 460 3.62e-43 159
MS.gene058372.t1 AT3G05165 26.316 475 316 8 12 485 19 460 3.62e-43 159
MS.gene058372.t1 AT3G05165 26.316 475 316 8 12 485 19 460 3.62e-43 159
MS.gene058372.t1 AT1G08900 26.847 406 275 7 85 485 25 413 1.18e-41 154
MS.gene058372.t1 AT1G08900 26.847 406 275 7 85 485 59 447 2.26e-41 154
MS.gene058372.t1 AT1G08900 26.847 406 275 7 85 485 67 455 2.93e-41 154
MS.gene058372.t1 AT1G08900 26.847 406 275 7 85 485 67 455 2.93e-41 154
MS.gene058372.t1 AT2G20780 25.673 483 327 11 13 489 45 501 3.50e-40 152
MS.gene058372.t1 AT1G75220 27.542 472 304 12 24 489 48 487 2.51e-39 149
MS.gene058372.t1 AT5G17010 27.812 489 289 12 24 485 48 499 1.03e-38 148
MS.gene058372.t1 AT5G17010 27.812 489 289 12 24 485 48 499 1.03e-38 148
MS.gene058372.t1 AT5G17010 27.812 489 289 12 24 485 48 499 1.03e-38 148
MS.gene058372.t1 AT5G59250 28.898 481 301 12 23 486 98 554 1.28e-38 148
MS.gene058372.t1 AT3G05160 25.840 476 319 8 11 485 9 451 2.59e-38 146
MS.gene058372.t1 AT1G08930 25.755 497 317 12 4 487 33 490 3.21e-38 146
MS.gene058372.t1 AT1G08930 25.755 497 317 12 4 487 33 490 3.21e-38 146
MS.gene058372.t1 AT3G05165 26.339 448 296 8 12 458 19 433 5.15e-38 146
MS.gene058372.t1 AT5G16150 26.915 483 315 13 6 485 92 539 9.22e-38 146
MS.gene058372.t1 AT5G16150 26.915 483 315 13 6 485 92 539 9.22e-38 146
MS.gene058372.t1 AT5G16150 26.915 483 315 13 6 485 92 539 9.22e-38 146
MS.gene058372.t1 AT3G03090 27.856 499 300 14 14 485 34 499 1.28e-37 145
MS.gene058372.t1 AT5G27360 25.105 478 318 7 12 485 24 465 1.30e-37 144
MS.gene058372.t1 AT5G27350 27.386 482 305 13 12 485 17 461 1.64e-37 144
MS.gene058372.t1 AT3G05160 27.228 404 280 6 83 485 12 402 1.93e-37 142
MS.gene058372.t1 AT3G05160 27.228 404 280 6 83 485 12 402 1.93e-37 142
MS.gene058372.t1 AT1G19450 27.637 474 301 12 24 489 49 488 2.33e-37 144
MS.gene058372.t1 AT5G27360 24.477 478 321 6 12 485 72 513 4.19e-37 144
MS.gene058372.t1 AT3G05165 26.478 423 277 8 12 433 19 408 6.84e-37 142
MS.gene058372.t1 AT3G05165 26.478 423 277 8 12 433 19 408 6.84e-37 142
MS.gene058372.t1 AT1G08890 24.375 480 321 10 12 486 16 458 1.01e-36 142
MS.gene058372.t1 AT2G20780 27.320 388 270 8 108 489 62 443 1.50e-36 141
MS.gene058372.t1 AT3G05400 24.790 476 324 12 11 485 14 456 1.31e-35 138
MS.gene058372.t1 AT5G27360 26.667 360 244 4 130 485 18 361 3.97e-35 135
MS.gene058372.t1 AT5G27360 26.667 360 244 4 130 485 18 361 3.97e-35 135
MS.gene058372.t1 AT1G30220 29.609 358 220 9 22 370 27 361 4.55e-35 139
MS.gene058372.t1 AT1G30220 33.607 122 76 2 380 496 447 568 2.53e-11 66.6
MS.gene058372.t1 AT4G04750 28.142 366 245 9 130 491 167 518 2.62e-34 135
MS.gene058372.t1 AT4G04750 28.142 366 245 9 130 491 123 474 2.69e-34 135
MS.gene058372.t1 AT4G04750 28.142 366 245 9 130 491 123 474 2.69e-34 135
MS.gene058372.t1 AT3G05400 28.032 371 252 9 117 485 79 436 3.00e-34 134
MS.gene058372.t1 AT5G18840 25.156 481 317 11 11 485 32 475 7.05e-34 134
MS.gene058372.t1 AT1G54730 25.328 458 308 7 29 485 38 462 1.68e-33 132
MS.gene058372.t1 AT1G08900 25.936 374 255 7 85 453 67 423 8.53e-33 130
MS.gene058372.t1 AT2G48020 26.462 359 250 6 130 487 115 460 3.61e-32 129
MS.gene058372.t1 AT2G48020 26.462 359 250 6 130 487 115 460 3.61e-32 129
MS.gene058372.t1 AT3G05150 26.575 365 242 9 139 491 131 481 9.22e-32 128
MS.gene058372.t1 AT3G05150 27.143 350 238 8 139 485 131 466 1.57e-31 127
MS.gene058372.t1 AT3G05150 27.143 350 238 8 139 485 131 466 1.57e-31 127
MS.gene058372.t1 AT4G04760 25.783 415 283 8 85 491 14 411 2.36e-31 125
MS.gene058372.t1 AT3G05155 25.862 406 279 10 85 486 69 456 5.41e-31 125
MS.gene058372.t1 AT4G04760 25.783 415 283 8 85 491 73 470 6.32e-31 125
MS.gene058372.t1 AT4G16480 30.548 347 208 9 20 355 24 348 7.83e-31 126
MS.gene058372.t1 AT4G16480 30.548 347 208 9 20 355 24 348 7.83e-31 126
MS.gene058372.t1 AT4G16480 30.548 347 208 9 20 355 24 348 7.83e-31 126
MS.gene058372.t1 AT2G35740 29.752 363 208 12 22 367 25 357 7.19e-30 123
MS.gene058372.t1 AT1G54730 25.175 429 287 7 29 456 38 433 1.26e-28 118
MS.gene058372.t1 AT1G54730 24.236 458 292 7 29 485 38 441 2.53e-28 117
MS.gene058372.t1 AT1G05030 24.130 460 316 11 29 485 85 514 4.13e-28 118
MS.gene058372.t1 AT1G05030 24.694 409 296 8 79 485 64 462 8.74e-28 116
MS.gene058372.t1 AT1G79820 23.707 464 313 14 28 485 59 487 4.17e-27 114
MS.gene058372.t1 AT1G79820 23.707 464 313 14 28 485 59 487 4.17e-27 114
MS.gene058372.t1 AT1G08920 24.000 500 325 14 1 485 10 469 2.54e-26 112
MS.gene058372.t1 AT1G08920 24.089 494 325 14 1 485 10 462 1.54e-25 109
MS.gene058372.t1 AT4G04760 24.524 420 277 9 85 490 73 466 1.56e-25 109
MS.gene058372.t1 AT3G20460 24.631 406 284 7 85 485 95 483 3.93e-25 108
MS.gene058372.t1 AT5G27360 23.671 414 276 7 12 421 24 401 1.39e-24 106
MS.gene058372.t1 AT1G67300 23.858 394 287 7 94 485 104 486 1.48e-24 107
MS.gene058372.t1 AT1G67300 23.858 394 287 7 94 485 104 486 1.48e-24 107
MS.gene058372.t1 AT1G67300 23.990 396 285 8 94 485 104 487 3.17e-24 106
MS.gene058372.t1 AT1G54730 24.009 429 271 7 29 456 38 412 1.49e-23 103
MS.gene058372.t1 AT1G67300 24.444 360 257 8 94 452 104 449 1.26e-22 100
MS.gene058372.t1 AT1G67300 24.444 360 257 8 94 452 104 449 1.26e-22 100
MS.gene058372.t1 AT1G67300 24.242 330 238 6 94 422 104 422 2.79e-22 99.8
MS.gene058372.t1 AT1G67300 24.242 330 238 6 94 422 104 422 2.79e-22 99.8
MS.gene058372.t1 AT1G54730 24.485 388 259 7 29 415 38 392 2.79e-21 96.7
MS.gene058372.t1 AT1G54730 24.485 388 259 7 29 415 38 392 2.79e-21 96.7
MS.gene058372.t1 AT1G79820 22.983 409 275 13 28 431 59 432 1.66e-20 94.7
MS.gene058372.t1 AT1G08920 23.542 463 304 14 1 454 10 431 3.53e-20 93.6
MS.gene058372.t1 AT5G17010 23.975 488 249 14 24 485 45 436 2.04e-19 91.3
MS.gene058372.t1 AT3G05155 25.912 274 184 7 85 355 69 326 9.36e-19 87.8
MS.gene058372.t1 AT3G51490 28.235 255 162 7 23 276 4 238 2.70e-18 89.0
MS.gene058372.t1 AT3G51490 27.885 208 134 5 286 482 512 714 2.70e-11 66.6
MS.gene058372.t1 AT3G51490 28.235 255 162 7 23 276 4 238 2.75e-18 88.6
MS.gene058372.t1 AT1G54730 25.305 328 213 6 29 355 38 334 1.19e-17 84.7
MS.gene058372.t1 AT1G79820 21.429 462 278 12 28 485 59 439 1.21e-17 85.9
MS.gene058372.t1 AT2G48020 26.800 250 169 6 130 378 115 351 3.68e-17 84.0
MS.gene058372.t1 AT1G54730 23.196 388 243 7 29 415 38 371 1.82e-16 81.6
MS.gene058372.t1 AT3G51490 31.053 190 127 4 88 276 2 188 2.09e-16 82.8
MS.gene058372.t1 AT3G51490 27.885 208 134 5 286 482 462 664 2.62e-11 66.6
MS.gene058372.t1 AT2G48020 27.155 232 157 4 130 360 115 335 2.42e-16 80.9
MS.gene058372.t1 AT1G54730 24.013 304 202 5 29 331 38 313 1.18e-14 75.5
MS.gene058372.t1 AT1G54730 24.013 304 202 5 29 331 38 313 1.18e-14 75.5
MS.gene058372.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.15e-14 76.6
MS.gene058372.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.15e-14 76.6
MS.gene058372.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.15e-14 76.6
MS.gene058372.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.15e-14 76.6
MS.gene058372.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.15e-14 76.6
MS.gene058372.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.15e-14 76.6
MS.gene058372.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.15e-14 76.6
MS.gene058372.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.21e-14 76.6
MS.gene058372.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.21e-14 76.6
MS.gene058372.t1 AT4G35300 35.762 151 94 3 107 256 70 218 2.21e-14 76.6
MS.gene058372.t1 AT1G20840 33.113 151 98 3 107 256 68 216 5.32e-14 75.1
MS.gene058372.t1 AT1G20840 33.113 151 98 3 107 256 68 216 5.32e-14 75.1

Find 120 sgRNAs with CRISPR-Local

Find 177 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAGGCTATTGGGAGTTTC+TGG 0.178636 3.2:-2486678 None:intergenic
CGCCTATACCAATGCTTAAT+TGG 0.213213 3.2:-2486533 None:intergenic
ACATCCTCTCTTTATGTTGC+TGG 0.228502 3.2:+2485714 MS.gene058372:CDS
AAGTAAAGGGTATGCTTATA+TGG 0.276197 3.2:+2487154 MS.gene058372:CDS
GGTCTTGGGTGGTTTGGATT+AGG 0.278010 3.2:-2486695 None:intergenic
GGTGGTTTGGATTAGGCTAT+TGG 0.284538 3.2:-2486688 None:intergenic
GGCTATGACATTGGTATAAC+AGG 0.292811 3.2:+2485570 MS.gene058372:CDS
TGTATTTATGTTGCTGGGTT+TGG 0.292843 3.2:+2487191 MS.gene058372:CDS
TCTTATGTCACCAGAGTCTT+TGG 0.299718 3.2:+2485759 MS.gene058372:CDS
ATGCTTTGCCACTTCAAGTC+TGG 0.305113 3.2:+2487347 MS.gene058372:CDS
GCTATGGGAGGTGTCATATT+TGG 0.306801 3.2:+2485549 MS.gene058372:CDS
TTTCTTCTTCTTTGGAGGTT+GGG 0.312209 3.2:+2487373 MS.gene058372:CDS
GTGGTTTGGATTAGGCTATT+GGG 0.325826 3.2:-2486687 None:intergenic
TGCTTTGCCACTTCAAGTCT+GGG 0.327809 3.2:+2487348 MS.gene058372:CDS
TTTGATGGTCTTGGGTGGTT+TGG 0.332601 3.2:-2486701 None:intergenic
TTTATTGCCCCTCTAAATCT+AGG 0.334602 3.2:-2486501 None:intergenic
GGTGGTGCTGCGTTCCTTGC+CGG 0.346188 3.2:+2485804 MS.gene058372:CDS
TGTGGCAGGAACATTGGTTT+TGG 0.348332 3.2:+2487471 MS.gene058372:CDS
TTCCTTGCCGGCACAGCCCT+TGG 0.352739 3.2:+2485816 MS.gene058372:CDS
TCTGCTAATCTAATCAACTA+TGG 0.363227 3.2:+2486561 MS.gene058372:CDS
CTCTTGTATGATGGCTGCTA+TGG 0.366245 3.2:+2485533 MS.gene058372:CDS
TATCATCTGATTTCATCTTA+AGG 0.371294 3.2:-2485644 None:intergenic
ATGATATGTATTTATGTTGC+TGG 0.372683 3.2:+2487185 MS.gene058372:CDS
TGCTGGGTTTGGATGGTCGT+GGG 0.379669 3.2:+2487202 MS.gene058372:CDS
TGTTGTTCTCTCTTGTATGA+TGG 0.382595 3.2:+2485524 MS.gene058372:CDS
TACAAGAGAGAACAACATAA+AGG 0.385049 3.2:-2485518 None:intergenic
GTTAATAATGGCAGTTGGAT+TGG 0.392274 3.2:+2485452 None:intergenic
TGGAAGAATTTATTCAGAAA+TGG 0.395141 3.2:-2485612 None:intergenic
ATGGCATTACCTAGATTTAG+AGG 0.398789 3.2:+2486492 MS.gene058372:CDS
CGCAAGCCGTCTATCGTTGC+AGG 0.403978 3.2:+2485783 MS.gene058372:CDS
GGAAAAGTGCACCTAGTGTT+AGG 0.409661 3.2:-2486653 None:intergenic
CATTGATCCCTGTCACTTGT+TGG 0.410113 3.2:-2486896 None:intergenic
AGAAAAGATCAAAGGCGGTT+GGG 0.419684 3.2:+2486587 MS.gene058372:CDS
CTTCTTTGGAGGTTGGGTGG+TGG 0.428296 3.2:+2487379 MS.gene058372:CDS
CAATTGTTCTGAAAAGTAAA+GGG 0.433614 3.2:-2486935 None:intergenic
TCCTCTATATCTCTCAGAAA+TGG 0.439787 3.2:+2486473 MS.gene058372:CDS
ATCATGGTGGATTAAGTAAA+GGG 0.444020 3.2:+2487141 MS.gene058372:CDS
CCAATTGTTCTGAAAAGTAA+AGG 0.448097 3.2:-2486936 None:intergenic
ATGTATAGTTGGAGGCATAA+TGG 0.458157 3.2:+2487103 MS.gene058372:CDS
GCCATTTCTGAGAGATATAG+AGG 0.460441 3.2:-2486474 None:intergenic
CCATTGGAGATTAGATCAGC+TGG 0.461723 3.2:+2487260 MS.gene058372:CDS
CTTGCCGGCACAGCCCTTGG+AGG 0.464507 3.2:+2485819 MS.gene058372:CDS
CTGGAACTGCTGCCATGGCT+AGG 0.466467 3.2:-2486623 None:intergenic
GTCATATTTGGCTATGACAT+TGG 0.468383 3.2:+2485561 MS.gene058372:CDS
ACAAGAGAGAACAACATAAA+GGG 0.470220 3.2:-2485517 None:intergenic
TTCCAATTAAGCATTGGTAT+AGG 0.471058 3.2:+2486531 MS.gene058372:CDS
CTTCTTCTTTGGAGGTTGGG+TGG 0.473447 3.2:+2487376 MS.gene058372:CDS
GATCATGGTGGATTAAGTAA+AGG 0.480657 3.2:+2487140 MS.gene058372:CDS
TGCACCTCCAAGGGCTGTGC+CGG 0.482405 3.2:-2485823 None:intergenic
TTGCTGGGTTTGGATGGTCG+TGG 0.495127 3.2:+2487201 MS.gene058372:CDS
TTTGTGTCACAATGTATAGT+TGG 0.495795 3.2:+2487092 MS.gene058372:CDS
GGATGGTCGTGGGGTCCACT+AGG 0.496301 3.2:+2487212 MS.gene058372:CDS
CTCCAAGGGCTGTGCCGGCA+AGG 0.498578 3.2:-2485818 None:intergenic
GCTATTGCCATTACAAGTTG+TGG 0.498771 3.2:-2486861 None:intergenic
CATTGATATGAATGTCGAAC+CGG 0.500730 3.2:-2487012 None:intergenic
TCTTGTATGATGGCTGCTAT+GGG 0.505887 3.2:+2485534 MS.gene058372:CDS
GAAAAGATCAAAGGCGGTTG+GGG 0.516727 3.2:+2486588 MS.gene058372:CDS
GGTCGTGGGGTCCACTAGGT+TGG 0.523423 3.2:+2487216 MS.gene058372:CDS
CAGAAAAGATCAAAGGCGGT+TGG 0.527734 3.2:+2486586 MS.gene058372:CDS
CGTTAAAAGCTGCACCTCCA+AGG 0.527801 3.2:-2485833 None:intergenic
AGACCATCAAAAGGCGAAGC+GGG 0.529020 3.2:+2486713 MS.gene058372:CDS
AGATCAAAGGCGGTTGGGGT+TGG 0.529423 3.2:+2486592 MS.gene058372:CDS
AATGGCTTCCAATTAAGCAT+TGG 0.529992 3.2:+2486525 MS.gene058372:CDS
TGATATGTATTTATGTTGCT+GGG 0.530313 3.2:+2487186 MS.gene058372:CDS
AAATGTGCCACTTGAACAGA+TGG 0.537240 3.2:+2487442 MS.gene058372:CDS
ACTTTCTCCATCTGTTCAAG+TGG 0.537978 3.2:-2487449 None:intergenic
GTGTCACAATGTATAGTTGG+AGG 0.538695 3.2:+2487095 MS.gene058372:CDS
ATATAGACCACAACTTGTAA+TGG 0.539544 3.2:+2486854 MS.gene058372:CDS
TGGAACTGCTGCCATGGCTA+GGG 0.539800 3.2:-2486622 None:intergenic
CTTCTATCATCTGTCATGAC+AGG 0.539953 3.2:+2486978 MS.gene058372:CDS
TGCACCTAGTGTTAGGAAAG+AGG 0.540574 3.2:-2486646 None:intergenic
AGAAAGTGTGGCAGGAACAT+TGG 0.544957 3.2:+2487465 MS.gene058372:CDS
AATACGAGGCGTAGAAGATG+TGG 0.545686 3.2:+2486746 MS.gene058372:CDS
GGTGACATAAGAAGCAAAGA+AGG 0.545956 3.2:-2485748 None:intergenic
AGAAAATCCCAGACTTGAAG+TGG 0.546285 3.2:-2487355 None:intergenic
TTTATGTTGCTGGGTTTGGA+TGG 0.547243 3.2:+2487195 MS.gene058372:CDS
AACCACCCAAGACCATCAAA+AGG 0.547849 3.2:+2486704 MS.gene058372:CDS
CCTAGTGTTAGGAAAGAGGC+TGG 0.548531 3.2:-2486642 None:intergenic
ATGCTCATAGTAGATAAACT+TGG 0.552754 3.2:+2487032 MS.gene058372:CDS
GCTGGGTTTGGATGGTCGTG+GGG 0.552928 3.2:+2487203 MS.gene058372:CDS
GCAGTTCATCTGAAAGATCA+TGG 0.556890 3.2:+2487125 MS.gene058372:CDS
CCAGCTGATCTAATCTCCAA+TGG 0.557191 3.2:-2487260 None:intergenic
ACAGATGGAGAAAGTGTGGC+AGG 0.558422 3.2:+2487457 MS.gene058372:CDS
TCTGTCATGACAGGCATAGT+AGG 0.559364 3.2:+2486987 MS.gene058372:CDS
GCACCACCTGCAACGATAGA+CGG 0.560330 3.2:-2485789 None:intergenic
TTGGCGTGTATCCCTAGCCA+TGG 0.560781 3.2:+2486611 MS.gene058372:CDS
AACGTGTACATGCTCATAGT+CGG 0.562079 3.2:+2485852 MS.gene058372:CDS
AACAGGTGGAGTGACATCAA+TGG 0.564414 3.2:+2485587 MS.gene058372:CDS
AAGTGACGACAGAGTTAATG+AGG 0.566726 3.2:+2487514 MS.gene058372:CDS
CCAGCCTCTTTCCTAACACT+AGG 0.567400 3.2:+2486642 MS.gene058372:CDS
TGGCATTACCTAGATTTAGA+GGG 0.568145 3.2:+2486493 MS.gene058372:CDS
TCATCTTAAGGTATATGTTG+TGG 0.570778 3.2:-2485632 None:intergenic
AGAGGCTGGAACTGCTGCCA+TGG 0.573628 3.2:-2486628 None:intergenic
GTGAACAAAAGAACAATGGC+AGG 0.579074 3.2:+2485490 MS.gene058372:CDS
AAGTAGAACTTGCTTTAGTG+AGG 0.579380 3.2:-2486785 None:intergenic
AGACTTGAAGTGGCAAAGCA+TGG 0.583713 3.2:-2487345 None:intergenic
AGGAGAACCTTGTTCATAGT+CGG 0.592391 3.2:+2487056 MS.gene058372:CDS
ATGACAGGCATAGTAGGTAC+CGG 0.599722 3.2:+2486993 MS.gene058372:CDS
CGGCTTGCGACCAAAGACTC+TGG 0.601335 3.2:-2485769 None:intergenic
GGCTATTGGGAGTTTCTGGT+AGG 0.603131 3.2:-2486674 None:intergenic
TTTAGAGGGGCAATAAACAA+TGG 0.606067 3.2:+2486507 MS.gene058372:CDS
GGCATTACCTAGATTTAGAG+GGG 0.616654 3.2:+2486494 MS.gene058372:CDS
TTGAACAGATGGAGAAAGTG+TGG 0.624733 3.2:+2487453 MS.gene058372:CDS
TATGGAACAGAAAAGATCAA+AGG 0.624964 3.2:+2486579 MS.gene058372:CDS
AATGCCTCCGACTATGAACA+AGG 0.629460 3.2:-2487063 None:intergenic
TGTATGATGGCTGCTATGGG+AGG 0.631318 3.2:+2485537 MS.gene058372:CDS
AAGCCGTCTATCGTTGCAGG+TGG 0.640393 3.2:+2485786 MS.gene058372:CDS
GTTAAAAGCTGCACCTCCAA+GGG 0.641610 3.2:-2485832 None:intergenic
TCATAGTAGATAAACTTGGA+AGG 0.643555 3.2:+2487036 MS.gene058372:CDS
AGATGTGGAAGCAGAACTCG+AGG 0.644676 3.2:+2486761 MS.gene058372:CDS
CCAAGTGAACAAAAGAACAA+TGG 0.648473 3.2:+2485486 MS.gene058372:CDS
AAAACCAGCAACATAAAGAG+AGG 0.649420 3.2:-2485718 None:intergenic
AAGACCATCAAAAGGCGAAG+CGG 0.653340 3.2:+2486712 MS.gene058372:CDS
AGAACCTTGTTCATAGTCGG+AGG 0.654101 3.2:+2487059 MS.gene058372:CDS
CGGGTACTTCAACGAATACG+AGG 0.655625 3.2:+2486732 MS.gene058372:CDS
AATTGTTCTGAAAAGTAAAG+GGG 0.667829 3.2:-2486934 None:intergenic
TATGACATTGGTATAACAGG+TGG 0.678566 3.2:+2485573 MS.gene058372:CDS
CTTGGTACTAACCAACCTAG+TGG 0.681267 3.2:-2487227 None:intergenic
GGAACAGAAAAGATCAAAGG+CGG 0.696154 3.2:+2486582 MS.gene058372:CDS
GTTCATCTGAAAGATCATGG+TGG 0.754590 3.2:+2487128 MS.gene058372:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCTTAGATATATATTTGTT+TGG - chr3.2:2486364-2486383 None:intergenic 15.0%
!!! TTGATAATTAGTAAAAATCA+AGG - chr3.2:2486056-2486075 None:intergenic 15.0%
!! ATTTACGTGTTAAAATTTCA+AGG - chr3.2:2486085-2486104 None:intergenic 20.0%
!! GTTATAAATTGTTGTGTATA+AGG + chr3.2:2486174-2486193 MS.gene058372:intron 20.0%
!!! TAATTTGATTGATAGTTTCA+GGG - chr3.2:2486031-2486050 None:intergenic 20.0%
!!! TATATTTGTTTGGTTCAAAT+TGG - chr3.2:2486354-2486373 None:intergenic 20.0%
!!! TTTAGTATTTCTATGTGTTT+GGG - chr3.2:2485952-2485971 None:intergenic 20.0%
!!! TTTTAGTATTTCTATGTGTT+TGG - chr3.2:2485953-2485972 None:intergenic 20.0%
! ATGATATGTATTTATGTTGC+TGG + chr3.2:2487185-2487204 MS.gene058372:CDS 25.0%
! TATCATCTGATTTCATCTTA+AGG - chr3.2:2485647-2485666 None:intergenic 25.0%
! TGATATGTATTTATGTTGCT+GGG + chr3.2:2487186-2487205 MS.gene058372:CDS 25.0%
! TGGAAGAATTTATTCAGAAA+TGG - chr3.2:2485615-2485634 None:intergenic 25.0%
!! CTAATTTGATTGATAGTTTC+AGG - chr3.2:2486032-2486051 None:intergenic 25.0%
!! TACTTGACATGATTTTCTAT+CGG - chr3.2:2486239-2486258 None:intergenic 25.0%
!! TTGATCGGATAAATGTTTTT+GGG - chr3.2:2486214-2486233 None:intergenic 25.0%
!! TTTGATCGGATAAATGTTTT+TGG - chr3.2:2486215-2486234 None:intergenic 25.0%
!!! AATTGTTCTGAAAAGTAAAG+GGG - chr3.2:2486937-2486956 None:intergenic 25.0%
!!! CAATTGTTCTGAAAAGTAAA+GGG - chr3.2:2486938-2486957 None:intergenic 25.0%
!!! CTTTACTTTTCAGAACAATT+GGG + chr3.2:2486937-2486956 MS.gene058372:CDS 25.0%
AAATTGTTGTGTATAAGGCA+AGG + chr3.2:2486179-2486198 MS.gene058372:intron 30.0%
ACAAGAGAGAACAACATAAA+GGG - chr3.2:2485520-2485539 None:intergenic 30.0%
ATATAGACCACAACTTGTAA+TGG + chr3.2:2486854-2486873 MS.gene058372:CDS 30.0%
ATGCTCATAGTAGATAAACT+TGG + chr3.2:2487032-2487051 MS.gene058372:CDS 30.0%
GAAAATCATGTCAAGTAACA+TGG + chr3.2:2486242-2486261 MS.gene058372:intron 30.0%
TACAAGAGAGAACAACATAA+AGG - chr3.2:2485521-2485540 None:intergenic 30.0%
TATGGAACAGAAAAGATCAA+AGG + chr3.2:2486579-2486598 MS.gene058372:CDS 30.0%
TCATAGTAGATAAACTTGGA+AGG + chr3.2:2487036-2487055 MS.gene058372:CDS 30.0%
TCATCTTAAGGTATATGTTG+TGG - chr3.2:2485635-2485654 None:intergenic 30.0%
TCTGCTAATCTAATCAACTA+TGG + chr3.2:2486561-2486580 MS.gene058372:CDS 30.0%
TGACATTGATGTAGATTTCA+CGG - chr3.2:2486131-2486150 None:intergenic 30.0%
TTGAAACTAGTGTGTGAATA+GGG + chr3.2:2485997-2486016 MS.gene058372:intron 30.0%
TTTGTGTCACAATGTATAGT+TGG + chr3.2:2487092-2487111 MS.gene058372:CDS 30.0%
! AAGTAAAGGGTATGCTTATA+TGG + chr3.2:2487154-2487173 MS.gene058372:CDS 30.0%
! ACATTATGTCCTAATTTTGC+AGG + chr3.2:2486446-2486465 MS.gene058372:intron 30.0%
! ATAACAAGCAATTTTCTCCT+TGG - chr3.2:2486159-2486178 None:intergenic 30.0%
! GATTTTCTATCGGATTTGAT+CGG - chr3.2:2486229-2486248 None:intergenic 30.0%
! TTTGAAACTAGTGTGTGAAT+AGG + chr3.2:2485996-2486015 MS.gene058372:intron 30.0%
!! ATCATGGTGGATTAAGTAAA+GGG + chr3.2:2487141-2487160 MS.gene058372:CDS 30.0%
!! CCAATTGTTCTGAAAAGTAA+AGG - chr3.2:2486939-2486958 None:intergenic 30.0%
!! CCTTTACTTTTCAGAACAAT+TGG + chr3.2:2486936-2486955 MS.gene058372:CDS 30.0%
!! TTCCAATTAAGCATTGGTAT+AGG + chr3.2:2486531-2486550 MS.gene058372:CDS 30.0%
!!! TGGTTTTGGAAGAAAATAGT+GGG + chr3.2:2487485-2487504 MS.gene058372:CDS 30.0%
!!! TTGGTTTTGGAAGAAAATAG+TGG + chr3.2:2487484-2487503 MS.gene058372:CDS 30.0%
AAAACCAGCAACATAAAGAG+AGG - chr3.2:2485721-2485740 None:intergenic 35.0%
AATGGCTTCCAATTAAGCAT+TGG + chr3.2:2486525-2486544 MS.gene058372:CDS 35.0%
ACATCAATGTCACATTTCCA+AGG + chr3.2:2486139-2486158 MS.gene058372:intron 35.0%
ACATTGATGTAGATTTCACG+GGG - chr3.2:2486129-2486148 None:intergenic 35.0%
ATGGCATTACCTAGATTTAG+AGG + chr3.2:2486492-2486511 MS.gene058372:CDS 35.0%
CATTGATATGAATGTCGAAC+CGG - chr3.2:2487015-2487034 None:intergenic 35.0%
CCAAGTGAACAAAAGAACAA+TGG + chr3.2:2485486-2485505 MS.gene058372:CDS 35.0%
CTATGTGTTTGGGAAGAAAA+GGG - chr3.2:2485942-2485961 None:intergenic 35.0%
GACATTGATGTAGATTTCAC+GGG - chr3.2:2486130-2486149 None:intergenic 35.0%
GTCATATTTGGCTATGACAT+TGG + chr3.2:2485561-2485580 MS.gene058372:CDS 35.0%
TATGACATTGGTATAACAGG+TGG + chr3.2:2485573-2485592 MS.gene058372:CDS 35.0%
TCCAATGGAAAAATCTCACT+TGG - chr3.2:2487248-2487267 None:intergenic 35.0%
TCCTCTATATCTCTCAGAAA+TGG + chr3.2:2486473-2486492 MS.gene058372:CDS 35.0%
TCTATGTGTTTGGGAAGAAA+AGG - chr3.2:2485943-2485962 None:intergenic 35.0%
TGGCATTACCTAGATTTAGA+GGG + chr3.2:2486493-2486512 MS.gene058372:CDS 35.0%
TGTATTTATGTTGCTGGGTT+TGG + chr3.2:2487191-2487210 MS.gene058372:CDS 35.0%
TGTTGTTCTCTCTTGTATGA+TGG + chr3.2:2485524-2485543 MS.gene058372:CDS 35.0%
TTTAGAGGGGCAATAAACAA+TGG + chr3.2:2486507-2486526 MS.gene058372:CDS 35.0%
TTTATTGCCCCTCTAAATCT+AGG - chr3.2:2486504-2486523 None:intergenic 35.0%
! AAGTAGAACTTGCTTTAGTG+AGG - chr3.2:2486788-2486807 None:intergenic 35.0%
! ACCAAGTGAGATTTTTCCAT+TGG + chr3.2:2487244-2487263 MS.gene058372:CDS 35.0%
! ATGTATAGTTGGAGGCATAA+TGG + chr3.2:2487103-2487122 MS.gene058372:CDS 35.0%
! CATTTTTCCAACAAGTGACA+GGG + chr3.2:2486889-2486908 MS.gene058372:CDS 35.0%
! CCATTGTTCTTTTGTTCACT+TGG - chr3.2:2485489-2485508 None:intergenic 35.0%
! CTTTTCAGAACAATTGGGTT+AGG + chr3.2:2486942-2486961 MS.gene058372:CDS 35.0%
! TTTCTTCTTCTTTGGAGGTT+GGG + chr3.2:2487373-2487392 MS.gene058372:CDS 35.0%
!! GATCATGGTGGATTAAGTAA+AGG + chr3.2:2487140-2487159 MS.gene058372:CDS 35.0%
!! TCTGGGATTTTCTTCTTCTT+TGG + chr3.2:2487365-2487384 MS.gene058372:CDS 35.0%
!! TTTTCTTCTTCTTTGGAGGT+TGG + chr3.2:2487372-2487391 MS.gene058372:CDS 35.0%
AACGTGTACATGCTCATAGT+CGG + chr3.2:2485852-2485871 MS.gene058372:CDS 40.0%
AAGTGACGACAGAGTTAATG+AGG + chr3.2:2487514-2487533 MS.gene058372:CDS 40.0%
ACATCCTCTCTTTATGTTGC+TGG + chr3.2:2485714-2485733 MS.gene058372:CDS 40.0%
ACTTTCTCCATCTGTTCAAG+TGG - chr3.2:2487452-2487471 None:intergenic 40.0%
AGAAAAGATCAAAGGCGGTT+GGG + chr3.2:2486587-2486606 MS.gene058372:CDS 40.0%
AGAAAATCCCAGACTTGAAG+TGG - chr3.2:2487358-2487377 None:intergenic 40.0%
AGGAGAACCTTGTTCATAGT+CGG + chr3.2:2487056-2487075 MS.gene058372:CDS 40.0%
ATTAGGCTATTGGGAGTTTC+TGG - chr3.2:2486681-2486700 None:intergenic 40.0%
CGCCTATACCAATGCTTAAT+TGG - chr3.2:2486536-2486555 None:intergenic 40.0%
CTTCTATCATCTGTCATGAC+AGG + chr3.2:2486978-2486997 MS.gene058372:CDS 40.0%
GCAGTTCATCTGAAAGATCA+TGG + chr3.2:2487125-2487144 MS.gene058372:CDS 40.0%
GCTATTGCCATTACAAGTTG+TGG - chr3.2:2486864-2486883 None:intergenic 40.0%
GGAAAGAAAAATTGGCTACC+TGG - chr3.2:2485914-2485933 None:intergenic 40.0%
GGAACAGAAAAGATCAAAGG+CGG + chr3.2:2486582-2486601 MS.gene058372:CDS 40.0%
GGCATTACCTAGATTTAGAG+GGG + chr3.2:2486494-2486513 MS.gene058372:CDS 40.0%
GGCTATGACATTGGTATAAC+AGG + chr3.2:2485570-2485589 MS.gene058372:CDS 40.0%
GGGTGACAGGAAAGAAAAAT+TGG - chr3.2:2485922-2485941 None:intergenic 40.0%
GGTGACATAAGAAGCAAAGA+AGG - chr3.2:2485751-2485770 None:intergenic 40.0%
GTGAACAAAAGAACAATGGC+AGG + chr3.2:2485490-2485509 MS.gene058372:CDS 40.0%
GTGTCACAATGTATAGTTGG+AGG + chr3.2:2487095-2487114 MS.gene058372:CDS 40.0%
GTTCATCTGAAAGATCATGG+TGG + chr3.2:2487128-2487147 MS.gene058372:CDS 40.0%
TCTTATGTCACCAGAGTCTT+TGG + chr3.2:2485759-2485778 MS.gene058372:CDS 40.0%
TCTTGTATGATGGCTGCTAT+GGG + chr3.2:2485534-2485553 MS.gene058372:CDS 40.0%
TTGAACAGATGGAGAAAGTG+TGG + chr3.2:2487453-2487472 MS.gene058372:CDS 40.0%
TTTATGTTGCTGGGTTTGGA+TGG + chr3.2:2487195-2487214 MS.gene058372:CDS 40.0%
! CCTGTCACTTGTTGGAAAAA+TGG - chr3.2:2486891-2486910 None:intergenic 40.0%
! GCCATTTCTGAGAGATATAG+AGG - chr3.2:2486477-2486496 None:intergenic 40.0%
! GGGATTTTCTTCTTCTTTGG+AGG + chr3.2:2487368-2487387 MS.gene058372:CDS 40.0%
! GTGGTTTGGATTAGGCTATT+GGG - chr3.2:2486690-2486709 None:intergenic 40.0%
! TCGACTTTTACTTGGAGTTG+GGG + chr3.2:2485875-2485894 MS.gene058372:CDS 40.0%
!! AAATGTGCCACTTGAACAGA+TGG + chr3.2:2487442-2487461 MS.gene058372:CDS 40.0%
!! ATAGTCGGTCGACTTTTACT+TGG + chr3.2:2485867-2485886 MS.gene058372:CDS 40.0%
!! CCATTTTTCCAACAAGTGAC+AGG + chr3.2:2486888-2486907 MS.gene058372:CDS 40.0%
!! GTCGACTTTTACTTGGAGTT+GGG + chr3.2:2485874-2485893 MS.gene058372:CDS 40.0%
!!! AGTGGCACATTTTTTGTCTC+TGG - chr3.2:2487434-2487453 None:intergenic 40.0%
!!! CACTTTTTCCTGAAGAGACA+TGG + chr3.2:2486273-2486292 MS.gene058372:intron 40.0%
!!! GCACATTTTTTGTCTCTGGT+AGG - chr3.2:2487430-2487449 None:intergenic 40.0%
AACAGGTGGAGTGACATCAA+TGG + chr3.2:2485587-2485606 MS.gene058372:CDS 45.0%
AACCACCCAAGACCATCAAA+AGG + chr3.2:2486704-2486723 MS.gene058372:CDS 45.0%
AAGACCATCAAAAGGCGAAG+CGG + chr3.2:2486712-2486731 MS.gene058372:CDS 45.0%
AATACGAGGCGTAGAAGATG+TGG + chr3.2:2486746-2486765 MS.gene058372:CDS 45.0%
AATGCCTCCGACTATGAACA+AGG - chr3.2:2487066-2487085 None:intergenic 45.0%
AGAACCTTGTTCATAGTCGG+AGG + chr3.2:2487059-2487078 MS.gene058372:CDS 45.0%
AGACTTGAAGTGGCAAAGCA+TGG - chr3.2:2487348-2487367 None:intergenic 45.0%
ATGACAGGCATAGTAGGTAC+CGG + chr3.2:2486993-2487012 MS.gene058372:CDS 45.0%
CAGAAAAGATCAAAGGCGGT+TGG + chr3.2:2486586-2486605 MS.gene058372:CDS 45.0%
CCAGCTGATCTAATCTCCAA+TGG - chr3.2:2487263-2487282 None:intergenic 45.0%
CCATTGGAGATTAGATCAGC+TGG + chr3.2:2487260-2487279 MS.gene058372:CDS 45.0%
CTCTTGTATGATGGCTGCTA+TGG + chr3.2:2485533-2485552 MS.gene058372:CDS 45.0%
CTTGGTACTAACCAACCTAG+TGG - chr3.2:2487230-2487249 None:intergenic 45.0%
GAAAAGATCAAAGGCGGTTG+GGG + chr3.2:2486588-2486607 MS.gene058372:CDS 45.0%
GAAGAGACATGGCAGTGATA+TGG + chr3.2:2486284-2486303 MS.gene058372:intron 45.0%
GAGGAACTGCCTGCAAAATT+AGG - chr3.2:2486458-2486477 None:intergenic 45.0%
GTTAAAAGCTGCACCTCCAA+GGG - chr3.2:2485835-2485854 None:intergenic 45.0%
TATCACTGCCATGTCTCTTC+AGG - chr3.2:2486284-2486303 None:intergenic 45.0%
TCTGTCATGACAGGCATAGT+AGG + chr3.2:2486987-2487006 MS.gene058372:CDS 45.0%
TGCACCTAGTGTTAGGAAAG+AGG - chr3.2:2486649-2486668 None:intergenic 45.0%
TTTGGGAAGAAAAGGGTGAC+AGG - chr3.2:2485935-2485954 None:intergenic 45.0%
! AGAAAGTGTGGCAGGAACAT+TGG + chr3.2:2487465-2487484 MS.gene058372:CDS 45.0%
! ATGCTTTGCCACTTCAAGTC+TGG + chr3.2:2487347-2487366 MS.gene058372:CDS 45.0%
! CATTGATCCCTGTCACTTGT+TGG - chr3.2:2486899-2486918 None:intergenic 45.0%
! CTTTTACTTGGAGTTGGGGT+TGG + chr3.2:2485879-2485898 MS.gene058372:CDS 45.0%
! GGAAAAGTGCACCTAGTGTT+AGG - chr3.2:2486656-2486675 None:intergenic 45.0%
! GGTGGTTTGGATTAGGCTAT+TGG - chr3.2:2486691-2486710 None:intergenic 45.0%
! TGCTTTGCCACTTCAAGTCT+GGG + chr3.2:2487348-2487367 MS.gene058372:CDS 45.0%
! TTTGATGGTCTTGGGTGGTT+TGG - chr3.2:2486704-2486723 None:intergenic 45.0%
!! CTTCGCCTTTTGATGGTCTT+GGG - chr3.2:2486712-2486731 None:intergenic 45.0%
!! GCTATGGGAGGTGTCATATT+TGG + chr3.2:2485549-2485568 MS.gene058372:CDS 45.0%
!! GGTCGACTTTTACTTGGAGT+TGG + chr3.2:2485873-2485892 MS.gene058372:CDS 45.0%
!!! TGTGGCAGGAACATTGGTTT+TGG + chr3.2:2487471-2487490 MS.gene058372:CDS 45.0%
AGACCATCAAAAGGCGAAGC+GGG + chr3.2:2486713-2486732 MS.gene058372:CDS 50.0%
AGATGTGGAAGCAGAACTCG+AGG + chr3.2:2486761-2486780 MS.gene058372:CDS 50.0%
CCAGCCTCTTTCCTAACACT+AGG + chr3.2:2486642-2486661 MS.gene058372:CDS 50.0%
CCTAGTGTTAGGAAAGAGGC+TGG - chr3.2:2486645-2486664 None:intergenic 50.0%
CGGGTACTTCAACGAATACG+AGG + chr3.2:2486732-2486751 MS.gene058372:CDS 50.0%
CGTTAAAAGCTGCACCTCCA+AGG - chr3.2:2485836-2485855 None:intergenic 50.0%
TGTATGATGGCTGCTATGGG+AGG + chr3.2:2485537-2485556 MS.gene058372:CDS 50.0%
! ACAGATGGAGAAAGTGTGGC+AGG + chr3.2:2487457-2487476 MS.gene058372:CDS 50.0%
! CTTCTTCTTTGGAGGTTGGG+TGG + chr3.2:2487376-2487395 MS.gene058372:CDS 50.0%
! GGTCTTGGGTGGTTTGGATT+AGG - chr3.2:2486698-2486717 None:intergenic 50.0%
!! GCTTCGCCTTTTGATGGTCT+TGG - chr3.2:2486713-2486732 None:intergenic 50.0%
!! GGCTATTGGGAGTTTCTGGT+AGG - chr3.2:2486677-2486696 None:intergenic 50.0%
!!! TGGGGTTGGTTTTGCTAACC+AGG + chr3.2:2485893-2485912 MS.gene058372:CDS 50.0%
AAGCCGTCTATCGTTGCAGG+TGG + chr3.2:2485786-2485805 MS.gene058372:CDS 55.0%
AGATCAAAGGCGGTTGGGGT+TGG + chr3.2:2486592-2486611 MS.gene058372:CDS 55.0%
GCACCACCTGCAACGATAGA+CGG - chr3.2:2485792-2485811 None:intergenic 55.0%
TGCTGGGTTTGGATGGTCGT+GGG + chr3.2:2487202-2487221 MS.gene058372:CDS 55.0%
TGGAACTGCTGCCATGGCTA+GGG - chr3.2:2486625-2486644 None:intergenic 55.0%
TTGCTGGGTTTGGATGGTCG+TGG + chr3.2:2487201-2487220 MS.gene058372:CDS 55.0%
TTGGCGTGTATCCCTAGCCA+TGG + chr3.2:2486611-2486630 MS.gene058372:CDS 55.0%
! CTTCTTTGGAGGTTGGGTGG+TGG + chr3.2:2487379-2487398 MS.gene058372:CDS 55.0%
! GTACCCGCTTCGCCTTTTGA+TGG - chr3.2:2486719-2486738 None:intergenic 55.0%
!! CGCCTTTTGATGGTCTTGGG+TGG - chr3.2:2486709-2486728 None:intergenic 55.0%
AGAGGCTGGAACTGCTGCCA+TGG - chr3.2:2486631-2486650 None:intergenic 60.0%
CGCAAGCCGTCTATCGTTGC+AGG + chr3.2:2485783-2485802 MS.gene058372:CDS 60.0%
CGGCTTGCGACCAAAGACTC+TGG - chr3.2:2485772-2485791 None:intergenic 60.0%
CTGGAACTGCTGCCATGGCT+AGG - chr3.2:2486626-2486645 None:intergenic 60.0%
GCTGGGTTTGGATGGTCGTG+GGG + chr3.2:2487203-2487222 MS.gene058372:CDS 60.0%
GGATGGTCGTGGGGTCCACT+AGG + chr3.2:2487212-2487231 MS.gene058372:CDS 65.0%
GGTCGTGGGGTCCACTAGGT+TGG + chr3.2:2487216-2487235 MS.gene058372:CDS 65.0%
TGCACCTCCAAGGGCTGTGC+CGG - chr3.2:2485826-2485845 None:intergenic 65.0%
TTCCTTGCCGGCACAGCCCT+TGG + chr3.2:2485816-2485835 MS.gene058372:CDS 65.0%
!! GGTGGTGCTGCGTTCCTTGC+CGG + chr3.2:2485804-2485823 MS.gene058372:CDS 65.0%
CTTGCCGGCACAGCCCTTGG+AGG + chr3.2:2485819-2485838 MS.gene058372:CDS 70.0%
! CTCCAAGGGCTGTGCCGGCA+AGG - chr3.2:2485821-2485840 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 2485459 2487544 2485459 ID=MS.gene058372
chr3.2 mRNA 2485459 2487544 2485459 ID=MS.gene058372.t1;Parent=MS.gene058372
chr3.2 exon 2485459 2485914 2485459 ID=MS.gene058372.t1.exon1;Parent=MS.gene058372.t1
chr3.2 CDS 2485459 2485914 2485459 ID=cds.MS.gene058372.t1;Parent=MS.gene058372.t1
chr3.2 exon 2486468 2487544 2486468 ID=MS.gene058372.t1.exon2;Parent=MS.gene058372.t1
chr3.2 CDS 2486468 2487544 2486468 ID=cds.MS.gene058372.t1;Parent=MS.gene058372.t1
Gene Sequence

>MS.gene058372

ATGGCAGTTGGATTGGCTATAACATGTCCAAGTGAACAAAAGAACAATGGCAGGATAACCCTTTATGTTGTTCTCTCTTGTATGATGGCTGCTATGGGAGGTGTCATATTTGGCTATGACATTGGTATAACAGGTGGAGTGACATCAATGGAACCATTTCTGAATAAATTCTTCCACAACATATACCTTAAGATGAAATCAGATGATAAAGTTAGCAACTATTGCATGTTTGACAGTCAACTACTGACTTCTTTTACATCCTCTCTTTATGTTGCTGGTTTTGTTACTTCCTTCTTTGCTTCTTATGTCACCAGAGTCTTTGGTCGCAAGCCGTCTATCGTTGCAGGTGGTGCTGCGTTCCTTGCCGGCACAGCCCTTGGAGGTGCAGCTTTTAACGTGTACATGCTCATAGTCGGTCGACTTTTACTTGGAGTTGGGGTTGGTTTTGCTAACCAGGTAGCCAATTTTTCTTTCCTGTCACCCTTTTCTTCCCAAACACATAGAAATACTAAAATAGTTTCATAATAATCAAGAGATTTTGAAACTAGTGTGTGAATAGGGAATTTTGTCCCTGAAACTATCAATCAAATTAGTCCTTGATTTTTACTAATTATCAATTTCGTCCTTGAAATTTTAACACGTAAATAAAAAATGAAGATGTATCAATCCCCGTGAAATCTACATCAATGTCACATTTCCAAGGAGAAAATTGCTTGTTATAAATTGTTGTGTATAAGGCAAGGAGTTACTTTCCCAAAAACATTTATCCGATCAAATCCGATAGAAAATCATGTCAAGTAACATGGAGACGTGACACTTTTTCCTGAAGAGACATGGCAGTGATATGGAGTTCACGTCAAGCGTCACATCTTCACTTAAAGTATAAGTTAATCCAATTTGAACCAAACAAATATATATCTAAGAAGTTTATCTAATATCTAACATCAATTGTCATGCTCTAATTACAGTTAGACTACAACTTCTTTCACATTATGTCCTAATTTTGCAGGCAGTTCCTCTATATCTCTCAGAAATGGCATTACCTAGATTTAGAGGGGCAATAAACAATGGCTTCCAATTAAGCATTGGTATAGGCGCTTTGTCTGCTAATCTAATCAACTATGGAACAGAAAAGATCAAAGGCGGTTGGGGTTGGCGTGTATCCCTAGCCATGGCAGCAGTTCCAGCCTCTTTCCTAACACTAGGTGCACTTTTCCTACCAGAAACTCCCAATAGCCTAATCCAAACCACCCAAGACCATCAAAAGGCGAAGCGGGTACTTCAACGAATACGAGGCGTAGAAGATGTGGAAGCAGAACTCGAGGACCTCACTAAAGCAAGTTCTACTTCAAAAATAAGTTCACAACAATCATTTAAGATTATATTGAAAAGAAGATATAGACCACAACTTGTAATGGCAATAGCAATACCATTTTTCCAACAAGTGACAGGGATCAATGTCATCGCTTTCTATGCCCCTTTACTTTTCAGAACAATTGGGTTAGGAGAAAGTGCATCGCTTCTATCATCTGTCATGACAGGCATAGTAGGTACCGGTTCGACATTCATATCAATGCTCATAGTAGATAAACTTGGAAGGAGAACCTTGTTCATAGTCGGAGGCATTCAAATGTTTGTGTCACAATGTATAGTTGGAGGCATAATGGCAGTTCATCTGAAAGATCATGGTGGATTAAGTAAAGGGTATGCTTATATGGTTTTGATAATGATATGTATTTATGTTGCTGGGTTTGGATGGTCGTGGGGTCCACTAGGTTGGTTAGTACCAAGTGAGATTTTTCCATTGGAGATTAGATCAGCTGGACAAAGCATCACAGTAGCAGTGAGTTTTCTCTTCACTTTTATTGTTGCTCAGACTTTTCTATCCATGCTTTGCCACTTCAAGTCTGGGATTTTCTTCTTCTTTGGAGGTTGGGTGGTGGTGATGACTGTGTTTGTGTATTGTTTCCTACCAGAGACAAAAAATGTGCCACTTGAACAGATGGAGAAAGTGTGGCAGGAACATTGGTTTTGGAAGAAAATAGTGGGAAAAATAAGTGACGACAGAGTTAATGAGGAATTATAA
Protein sequence

>MS.gene058372.t1

MAVGLAITCPSEQKNNGRITLYVVLSCMMAAMGGVIFGYDIGITGGVTSMEPFLNKFFHNIYLKMKSDDKVSNYCMFDSQLLTSFTSSLYVAGFVTSFFASYVTRVFGRKPSIVAGGAAFLAGTALGGAAFNVYMLIVGRLLLGVGVGFANQAVPLYLSEMALPRFRGAINNGFQLSIGIGALSANLINYGTEKIKGGWGWRVSLAMAAVPASFLTLGALFLPETPNSLIQTTQDHQKAKRVLQRIRGVEDVEAELEDLTKASSTSKISSQQSFKIILKRRYRPQLVMAIAIPFFQQVTGINVIAFYAPLLFRTIGLGESASLLSSVMTGIVGTGSTFISMLIVDKLGRRTLFIVGGIQMFVSQCIVGGIMAVHLKDHGGLSKGYAYMVLIMICIYVAGFGWSWGPLGWLVPSEIFPLEIRSAGQSITVAVSFLFTFIVAQTFLSMLCHFKSGIFFFFGGWVVVMTVFVYCFLPETKNVPLEQMEKVWQEHWFWKKIVGKISDDRVNEEL