AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene006547

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006547.t1 MTR_4g077740 99.119 454 4 0 20 473 47 500 0.0 881
MS.gene006547.t1 MTR_4g064820 60.054 368 142 3 20 384 98 463 3.82e-146 427
MS.gene006547.t1 MTR_3g116240 33.188 458 280 6 30 470 40 488 2.57e-72 238
MS.gene006547.t1 MTR_6g088450 32.667 450 272 7 28 463 68 500 4.13e-70 232
MS.gene006547.t1 MTR_4g069500 32.990 485 284 12 13 471 20 489 3.93e-68 227
MS.gene006547.t1 MTR_4g072030 31.743 482 291 10 13 470 17 484 5.97e-67 223
MS.gene006547.t1 MTR_4g069500 34.058 414 252 7 75 471 30 439 2.45e-66 221
MS.gene006547.t1 MTR_5g075300 31.567 453 288 5 33 470 34 479 5.62e-66 220
MS.gene006547.t1 MTR_7g446340 29.787 470 278 10 23 470 60 499 8.01e-66 221
MS.gene006547.t1 MTR_6g007340 29.787 470 278 10 23 470 60 499 8.01e-66 221
MS.gene006547.t1 MTR_8g103500 32.468 462 284 8 23 471 23 469 3.14e-65 218
MS.gene006547.t1 MTR_1g116660 32.237 456 275 8 28 470 45 479 3.30e-65 219
MS.gene006547.t1 MTR_2g013310 30.472 466 280 9 23 470 58 497 5.31e-64 216
MS.gene006547.t1 MTR_3g084110 32.967 455 271 8 28 469 38 471 5.34e-64 215
MS.gene006547.t1 MTR_2g013310 30.496 423 265 7 60 470 19 424 1.83e-60 204
MS.gene006547.t1 MTR_7g005910 32.026 459 271 8 28 470 43 476 2.38e-60 206
MS.gene006547.t1 MTR_8g077890 30.684 453 292 5 33 470 34 479 2.41e-60 206
MS.gene006547.t1 MTR_7g094450 32.018 456 276 11 24 471 42 471 1.37e-57 197
MS.gene006547.t1 MTR_7g113960 30.889 450 277 10 28 472 37 457 3.08e-57 197
MS.gene006547.t1 MTR_1g116650 29.630 459 274 5 26 470 86 509 4.53e-57 197
MS.gene006547.t1 MTR_5g020270 32.533 458 272 10 23 470 55 485 1.57e-56 195
MS.gene006547.t1 MTR_1g022315 31.155 459 278 10 23 470 54 485 3.08e-56 194
MS.gene006547.t1 MTR_7g094110 31.435 474 285 11 9 471 29 473 6.62e-56 193
MS.gene006547.t1 MTR_6g018790 31.718 454 272 9 27 470 114 539 6.96e-56 195
MS.gene006547.t1 MTR_7g082270 31.544 447 282 6 27 470 74 499 4.47e-55 192
MS.gene006547.t1 MTR_8g077310 31.739 460 273 12 23 470 52 482 7.80e-55 191
MS.gene006547.t1 MTR_7g113970 30.176 454 283 7 23 470 67 492 2.20e-53 187
MS.gene006547.t1 MTR_4g118610 29.333 450 285 8 28 471 62 484 6.17e-53 186
MS.gene006547.t1 MTR_1g022315 30.788 406 250 9 76 470 1 386 1.04e-52 182
MS.gene006547.t1 MTR_8g077300 32.112 464 270 12 23 472 44 476 2.69e-52 184
MS.gene006547.t1 MTR_5g020270 32.099 405 245 9 76 470 1 385 3.55e-52 181
MS.gene006547.t1 MTR_8g077310 31.941 407 243 11 76 470 1 385 6.44e-52 180
MS.gene006547.t1 MTR_0204s0020 30.753 465 283 11 26 469 29 475 2.47e-50 179
MS.gene006547.t1 MTR_1g104770 30.297 472 283 11 26 469 31 484 2.87e-50 179
MS.gene006547.t1 MTR_0204s0020 29.185 466 292 9 26 469 29 478 1.92e-49 176
MS.gene006547.t1 MTR_2g020710 28.218 404 264 7 74 471 9 392 4.39e-49 173
MS.gene006547.t1 MTR_2g020710 26.889 450 296 7 28 471 59 481 5.61e-49 175
MS.gene006547.t1 MTR_1g104750 30.042 476 284 12 26 472 31 486 5.99e-49 175
MS.gene006547.t1 MTR_6g087040 29.958 474 280 12 26 469 34 485 4.41e-48 173
MS.gene006547.t1 MTR_6g088375 29.958 474 280 12 26 469 34 485 4.41e-48 173
MS.gene006547.t1 MTR_8g102860 30.998 471 279 12 26 469 34 485 6.11e-48 172
MS.gene006547.t1 MTR_3g023480 29.895 475 285 13 26 470 29 485 1.53e-47 171
MS.gene006547.t1 MTR_5g020270 31.707 451 264 12 23 470 55 464 1.67e-47 171
MS.gene006547.t1 MTR_3g074270 28.247 485 301 9 6 469 4 462 1.88e-47 171
MS.gene006547.t1 MTR_5g006070 29.684 475 288 13 26 472 30 486 1.57e-46 169
MS.gene006547.t1 MTR_5g041550 29.375 480 283 12 26 471 31 488 1.62e-46 169
MS.gene006547.t1 MTR_7g082270 31.658 398 240 7 27 417 74 446 1.75e-46 168
MS.gene006547.t1 MTR_0009s0370 30.189 477 281 14 26 470 29 485 5.42e-46 167
MS.gene006547.t1 MTR_1g104780 29.958 474 288 10 26 472 30 486 5.47e-46 167
MS.gene006547.t1 MTR_4g013205 28.998 469 300 9 10 470 26 469 7.83e-46 166
MS.gene006547.t1 MTR_3g074390 27.664 488 308 12 6 469 22 488 1.09e-45 166
MS.gene006547.t1 MTR_0204s0040 28.998 469 291 9 26 470 37 487 1.18e-45 166
MS.gene006547.t1 MTR_6g087910 29.888 445 285 8 30 470 62 483 1.41e-45 166
MS.gene006547.t1 MTR_7g094110 30.501 459 259 12 24 471 44 453 1.60e-45 165
MS.gene006547.t1 MTR_4g116790 29.747 474 279 11 26 469 35 484 3.56e-45 165
MS.gene006547.t1 MTR_8g102860 31.121 437 268 11 47 469 16 433 3.96e-45 164
MS.gene006547.t1 MTR_4g116770 29.060 468 290 9 26 469 233 682 6.18e-45 167
MS.gene006547.t1 MTR_3g008160 28.511 470 295 10 26 470 31 484 1.45e-44 163
MS.gene006547.t1 MTR_3g007910 29.194 459 275 10 26 469 30 453 1.94e-44 162
MS.gene006547.t1 MTR_3g093010 28.421 475 292 12 26 470 30 486 2.24e-44 163
MS.gene006547.t1 MTR_3g080240 29.204 452 295 8 23 470 98 528 4.92e-44 162
MS.gene006547.t1 MTR_5g006070 29.412 425 272 9 60 472 30 438 7.07e-44 160
MS.gene006547.t1 MTR_5g094760 30.786 471 278 12 26 469 35 484 2.44e-43 160
MS.gene006547.t1 MTR_4g091370 29.661 472 289 11 26 470 31 486 4.87e-43 159
MS.gene006547.t1 MTR_5g077580 26.449 552 274 13 20 470 27 547 7.72e-43 159
MS.gene006547.t1 MTR_3g074410 27.848 474 293 13 26 470 33 486 1.67e-42 157
MS.gene006547.t1 MTR_2g049020 31.686 344 217 7 20 359 27 356 3.97e-42 158
MS.gene006547.t1 MTR_2g049020 41.414 99 58 0 372 470 452 550 1.97e-14 75.9
MS.gene006547.t1 MTR_1g038630 28.450 471 294 9 26 470 31 484 3.99e-42 157
MS.gene006547.t1 MTR_3g008160 28.638 426 280 8 55 470 24 435 7.97e-42 155
MS.gene006547.t1 MTR_2g048720 33.430 344 208 8 20 359 27 353 9.41e-42 157
MS.gene006547.t1 MTR_3g008170 27.004 474 310 10 20 470 25 485 3.85e-41 154
MS.gene006547.t1 MTR_7g091690 30.085 472 282 12 26 470 35 485 1.35e-40 152
MS.gene006547.t1 MTR_1g038600 29.103 457 291 9 26 470 31 466 1.92e-40 152
MS.gene006547.t1 MTR_3g093060 27.610 431 272 9 59 470 30 439 1.99e-40 151
MS.gene006547.t1 MTR_5g082540 27.766 479 293 12 23 470 28 484 4.79e-40 151
MS.gene006547.t1 MTR_5g019870 26.253 419 281 7 75 471 65 477 5.81e-39 147
MS.gene006547.t1 MTR_4g069500 31.126 302 191 5 184 471 2 300 1.11e-37 140
MS.gene006547.t1 MTR_8g077310 31.148 366 218 11 23 382 52 389 3.69e-37 141
MS.gene006547.t1 MTR_4g118610 27.681 401 252 10 28 420 62 432 2.65e-36 139
MS.gene006547.t1 MTR_4g090600 28.931 477 286 11 26 470 31 486 1.23e-35 139
MS.gene006547.t1 MTR_7g113960 29.248 359 221 9 28 381 37 367 2.38e-34 133
MS.gene006547.t1 MTR_2g020710 25.397 378 250 6 28 399 59 410 2.82e-33 130
MS.gene006547.t1 MTR_2g020710 25.464 377 249 6 28 398 59 409 4.75e-33 130
MS.gene006547.t1 MTR_2g026160 28.909 339 219 7 28 359 37 360 1.19e-32 131
MS.gene006547.t1 MTR_2g026160 43.000 100 57 0 371 470 454 553 6.10e-15 77.8
MS.gene006547.t1 MTR_3g074380 25.490 357 234 8 5 348 19 356 1.35e-31 125
MS.gene006547.t1 MTR_4g064807 71.795 78 22 0 395 472 1 78 1.98e-30 113
MS.gene006547.t1 MTR_7g113970 28.099 363 228 6 23 379 67 402 6.68e-30 121
MS.gene006547.t1 MTR_4g116790 28.451 355 208 9 26 357 35 366 9.15e-30 120
MS.gene006547.t1 MTR_2g020710 25.148 338 227 5 28 365 59 370 1.38e-26 110
MS.gene006547.t1 MTR_2g026140 28.024 339 210 9 28 359 34 345 6.77e-24 105
MS.gene006547.t1 MTR_2g026140 41.000 100 59 0 371 470 439 538 2.50e-11 66.2
MS.gene006547.t1 MTR_3g118530 28.464 267 175 6 218 469 458 723 3.01e-21 97.4
MS.gene006547.t1 MTR_3g118530 34.146 164 104 3 65 224 46 209 1.41e-15 79.7
MS.gene006547.t1 MTR_3g074370 29.139 302 187 10 180 469 30 316 1.28e-20 93.2
MS.gene006547.t1 MTR_3g074340 29.139 302 187 10 180 469 30 316 1.44e-20 93.2
MS.gene006547.t1 MTR_3g074320 30.065 306 179 11 180 469 30 316 2.29e-20 92.4
MS.gene006547.t1 MTR_3g116060 34.756 164 103 3 65 224 44 207 6.21e-20 93.6
MS.gene006547.t1 MTR_3g116060 33.654 208 126 5 274 469 506 713 2.13e-19 91.7
MS.gene006547.t1 MTR_5g024740 32.212 208 120 7 27 224 13 209 3.03e-19 91.3
MS.gene006547.t1 MTR_5g024740 31.100 209 130 4 274 469 498 705 1.57e-14 76.6
MS.gene006547.t1 MTR_3g074400 25.000 428 266 14 60 467 28 420 4.37e-19 89.7
MS.gene006547.t1 MTR_5g044910 32.143 168 102 4 65 224 46 209 3.88e-18 87.8
MS.gene006547.t1 MTR_5g044910 29.126 206 134 3 274 467 496 701 3.35e-14 75.5
MS.gene006547.t1 MTR_8g073100 29.958 237 138 7 26 259 12 223 7.83e-17 84.0
MS.gene006547.t1 MTR_8g073100 30.622 209 131 3 274 469 494 701 7.29e-16 80.9
MS.gene006547.t1 MTR_5g096000 32.787 183 112 5 26 203 30 206 1.52e-15 77.8
MS.gene006547.t1 MTR_3g118530 34.146 164 104 3 65 224 46 209 3.23e-15 78.6
MS.gene006547.t1 MTR_0064s0040 36.441 118 72 2 23 138 29 145 1.87e-13 68.6
MS.gene006547.t1 MTR_2g081930 24.312 436 266 19 60 468 119 517 1.06e-11 67.4
MS.gene006547.t1 MTR_7g021390 32.231 121 64 2 351 471 37 139 2.35e-11 62.0
MS.gene006547.t1 MTR_4g081490 23.747 379 259 11 87 461 76 428 4.35e-11 65.1
MS.gene006547.t1 MTR_7g094420 30.137 146 79 3 287 430 4 128 5.65e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene006547.t1 AT5G17010 73.789 454 119 0 20 473 49 502 0.0 696
MS.gene006547.t1 AT5G17010 73.789 454 119 0 20 473 49 502 0.0 696
MS.gene006547.t1 AT5G17010 73.789 454 119 0 20 473 49 502 0.0 696
MS.gene006547.t1 AT3G03090 69.248 452 139 0 22 473 51 502 0.0 655
MS.gene006547.t1 AT5G59250 62.500 456 168 2 20 472 100 555 0.0 570
MS.gene006547.t1 AT5G17010 57.642 458 126 4 20 473 46 439 4.59e-177 504
MS.gene006547.t1 AT3G18830 31.868 455 289 5 30 470 48 495 5.62e-70 232
MS.gene006547.t1 AT4G36670 32.321 461 281 8 30 471 29 477 3.74e-69 229
MS.gene006547.t1 AT5G27360 33.775 453 262 9 28 472 45 467 2.64e-66 221
MS.gene006547.t1 AT2G20780 32.613 463 270 10 24 470 61 497 2.89e-66 222
MS.gene006547.t1 AT5G27360 33.038 451 268 8 28 472 93 515 4.94e-66 221
MS.gene006547.t1 AT2G18480 32.244 459 277 9 32 470 36 480 9.94e-64 215
MS.gene006547.t1 AT2G16120 32.265 468 271 8 30 470 38 486 1.16e-63 214
MS.gene006547.t1 AT2G16130 32.026 459 286 6 30 471 38 487 3.23e-63 213
MS.gene006547.t1 AT2G20780 33.094 417 252 8 64 470 40 439 9.64e-63 211
MS.gene006547.t1 AT3G05150 32.840 405 244 8 74 471 84 467 2.69e-62 210
MS.gene006547.t1 AT3G05150 32.840 405 244 8 74 471 84 467 2.69e-62 210
MS.gene006547.t1 AT3G05150 32.840 405 244 8 74 471 84 467 3.90e-62 210
MS.gene006547.t1 AT5G27350 31.180 449 275 8 28 470 41 461 4.39e-62 209
MS.gene006547.t1 AT3G05165 31.250 448 272 9 32 472 44 462 9.39e-60 203
MS.gene006547.t1 AT3G05165 31.250 448 272 9 32 472 44 462 9.39e-60 203
MS.gene006547.t1 AT3G05165 31.250 448 272 9 32 472 44 462 9.39e-60 203
MS.gene006547.t1 AT2G43330 32.969 458 270 8 28 470 41 476 1.08e-58 201
MS.gene006547.t1 AT3G05160 33.005 406 243 8 74 472 21 404 4.84e-58 197
MS.gene006547.t1 AT3G05160 33.005 406 243 8 74 472 21 404 4.84e-58 197
MS.gene006547.t1 AT5G27360 33.938 386 224 8 95 472 1 363 7.85e-58 196
MS.gene006547.t1 AT5G27360 33.938 386 224 8 95 472 1 363 7.85e-58 196
MS.gene006547.t1 AT3G05160 31.920 448 269 9 32 472 35 453 9.62e-58 197
MS.gene006547.t1 AT2G48020 31.486 451 273 10 28 471 38 459 5.23e-56 193
MS.gene006547.t1 AT2G48020 31.486 451 273 10 28 471 38 459 5.23e-56 193
MS.gene006547.t1 AT3G19940 31.780 472 275 11 26 469 33 485 1.02e-54 191
MS.gene006547.t1 AT5G18840 29.654 462 288 9 20 471 42 476 1.57e-54 190
MS.gene006547.t1 AT1G54730 30.155 451 277 10 28 470 42 462 2.63e-54 189
MS.gene006547.t1 AT1G08930 29.519 437 276 8 44 471 76 489 7.33e-54 188
MS.gene006547.t1 AT1G08930 29.519 437 276 8 44 471 76 489 7.33e-54 188
MS.gene006547.t1 AT1G50310 31.315 479 269 12 26 469 33 486 1.24e-52 185
MS.gene006547.t1 AT5G16150 32.294 449 274 9 28 470 115 539 1.62e-52 186
MS.gene006547.t1 AT5G16150 32.294 449 274 9 28 470 115 539 1.62e-52 186
MS.gene006547.t1 AT5G16150 32.294 449 274 9 28 470 115 539 1.62e-52 186
MS.gene006547.t1 AT5G23270 30.146 481 273 13 26 469 32 486 2.87e-51 182
MS.gene006547.t1 AT4G02050 30.444 473 283 11 23 469 32 484 2.61e-50 179
MS.gene006547.t1 AT4G02050 30.444 473 283 11 23 469 32 484 2.61e-50 179
MS.gene006547.t1 AT1G19450 31.236 461 276 13 23 471 54 485 8.54e-49 174
MS.gene006547.t1 AT1G67300 29.778 450 280 7 31 470 64 487 5.28e-48 172
MS.gene006547.t1 AT1G75220 29.847 459 285 9 23 471 53 484 5.42e-48 172
MS.gene006547.t1 AT3G05165 30.332 422 255 10 32 443 44 436 8.07e-48 172
MS.gene006547.t1 AT1G79820 30.580 448 278 9 30 470 66 487 1.50e-47 171
MS.gene006547.t1 AT1G79820 30.580 448 278 9 30 470 66 487 1.50e-47 171
MS.gene006547.t1 AT1G77210 30.462 476 275 13 26 469 34 485 4.26e-47 170
MS.gene006547.t1 AT1G77210 30.462 476 275 13 26 469 34 485 4.26e-47 170
MS.gene006547.t1 AT1G67300 29.399 449 282 7 31 470 64 486 5.02e-47 170
MS.gene006547.t1 AT1G67300 29.399 449 282 7 31 470 64 486 5.02e-47 170
MS.gene006547.t1 AT5G26340 29.474 475 289 12 26 472 31 487 5.70e-47 170
MS.gene006547.t1 AT3G05165 29.902 408 251 8 32 432 44 423 9.78e-47 168
MS.gene006547.t1 AT3G05165 29.902 408 251 8 32 432 44 423 9.78e-47 168
MS.gene006547.t1 AT1G11260 28.875 471 292 9 26 469 31 485 3.19e-46 168
MS.gene006547.t1 AT1G08900 29.587 436 279 9 44 472 1 415 5.92e-45 162
MS.gene006547.t1 AT1G08900 29.587 436 279 9 44 472 43 457 1.60e-44 162
MS.gene006547.t1 AT1G08900 29.587 436 279 9 44 472 43 457 1.60e-44 162
MS.gene006547.t1 AT1G54730 28.000 450 267 10 28 470 42 441 2.01e-44 162
MS.gene006547.t1 AT3G05155 27.455 448 287 9 32 472 41 457 2.08e-44 162
MS.gene006547.t1 AT1G08900 29.524 420 269 8 59 472 51 449 2.19e-44 162
MS.gene006547.t1 AT1G05030 28.319 452 293 7 26 470 87 514 2.64e-44 163
MS.gene006547.t1 AT1G54730 28.979 421 262 9 28 440 42 433 4.11e-44 160
MS.gene006547.t1 AT5G27360 31.865 386 226 8 28 405 45 401 9.22e-44 159
MS.gene006547.t1 AT3G05400 28.539 445 284 9 32 470 40 456 8.65e-43 157
MS.gene006547.t1 AT3G05960 28.151 476 286 11 26 470 29 479 1.55e-42 158
MS.gene006547.t1 AT1G05030 28.504 421 275 6 57 470 61 462 2.05e-42 157
MS.gene006547.t1 AT1G08890 28.918 453 290 10 29 470 26 457 2.21e-42 156
MS.gene006547.t1 AT3G19930 27.004 474 297 8 26 470 31 484 2.97e-42 157
MS.gene006547.t1 AT3G19930 27.004 474 297 8 26 470 31 484 2.97e-42 157
MS.gene006547.t1 AT4G21480 28.814 472 291 9 26 470 31 484 9.51e-42 155
MS.gene006547.t1 AT1G30220 33.144 353 209 8 20 363 29 363 1.10e-41 157
MS.gene006547.t1 AT1G30220 38.462 104 64 0 367 470 450 553 1.30e-13 73.6
MS.gene006547.t1 AT1G34580 28.632 468 292 10 29 469 35 487 4.00e-41 154
MS.gene006547.t1 AT5G26250 28.632 475 285 13 26 470 30 480 6.18e-41 153
MS.gene006547.t1 AT1G08920 26.432 454 294 8 28 472 42 464 9.89e-41 152
MS.gene006547.t1 AT4G04750 28.664 464 287 14 20 471 38 469 1.40e-40 152
MS.gene006547.t1 AT4G04750 28.664 464 287 14 20 471 38 469 1.40e-40 152
MS.gene006547.t1 AT4G04750 28.664 464 287 14 20 471 82 513 1.73e-40 152
MS.gene006547.t1 AT1G07340 28.454 485 278 14 26 472 31 484 4.31e-40 151
MS.gene006547.t1 AT3G20460 26.477 457 302 8 23 471 54 484 9.99e-40 150
MS.gene006547.t1 AT1G34580 29.257 417 264 9 69 469 36 437 2.25e-39 148
MS.gene006547.t1 AT4G04760 27.115 461 299 10 20 471 33 465 6.69e-39 147
MS.gene006547.t1 AT1G08920 26.030 461 294 9 28 472 42 471 9.64e-39 147
MS.gene006547.t1 AT1G67300 28.218 404 253 8 31 423 64 441 1.90e-38 145
MS.gene006547.t1 AT1G67300 28.218 404 253 8 31 423 64 441 1.90e-38 145
MS.gene006547.t1 AT1G79820 30.127 395 243 9 30 417 66 434 1.97e-38 145
MS.gene006547.t1 AT4G04760 27.764 407 264 9 74 471 21 406 2.40e-38 144
MS.gene006547.t1 AT1G67300 28.316 392 246 7 31 413 64 429 2.95e-38 144
MS.gene006547.t1 AT1G67300 28.316 392 246 7 31 413 64 429 2.95e-38 144
MS.gene006547.t1 AT3G05400 26.517 445 273 10 32 470 40 436 7.58e-37 141
MS.gene006547.t1 AT2G35740 30.058 346 228 7 28 370 36 370 1.53e-36 142
MS.gene006547.t1 AT2G35740 39.394 99 60 0 372 470 458 556 2.82e-13 72.4
MS.gene006547.t1 AT1G54730 28.684 380 234 9 28 399 42 392 5.83e-36 138
MS.gene006547.t1 AT1G54730 28.684 380 234 9 28 399 42 392 5.83e-36 138
MS.gene006547.t1 AT5G61520 26.596 470 305 11 26 469 32 487 2.77e-35 137
MS.gene006547.t1 AT4G04760 26.509 464 295 11 20 471 33 462 1.01e-34 135
MS.gene006547.t1 AT1G54730 26.667 420 252 9 28 440 42 412 1.51e-34 134
MS.gene006547.t1 AT5G61520 27.711 415 275 10 66 469 39 439 3.32e-34 134
MS.gene006547.t1 AT4G16480 29.345 351 210 7 28 363 37 364 3.40e-34 135
MS.gene006547.t1 AT4G16480 41.414 99 58 0 372 470 459 557 1.44e-14 76.6
MS.gene006547.t1 AT4G16480 29.345 351 210 7 28 363 37 364 3.40e-34 135
MS.gene006547.t1 AT4G16480 41.414 99 58 0 372 470 459 557 1.44e-14 76.6
MS.gene006547.t1 AT4G16480 29.345 351 210 7 28 363 37 364 3.40e-34 135
MS.gene006547.t1 AT4G16480 41.414 99 58 0 372 470 459 557 1.44e-14 76.6
MS.gene006547.t1 AT1G50310 30.748 361 203 10 131 469 8 343 4.58e-34 132
MS.gene006547.t1 AT2G48020 29.526 359 218 9 28 379 38 368 8.69e-34 131
MS.gene006547.t1 AT1G08900 27.696 408 268 8 42 442 41 428 7.01e-33 130
MS.gene006547.t1 AT1G77210 31.006 358 204 12 131 469 3 336 9.18e-32 125
MS.gene006547.t1 AT2G48020 29.375 320 197 7 28 346 38 329 3.37e-30 120
MS.gene006547.t1 AT1G08920 24.242 429 282 8 23 438 33 431 5.12e-30 122
MS.gene006547.t1 AT1G54730 29.283 321 196 8 28 346 42 333 9.82e-29 116
MS.gene006547.t1 AT3G05155 27.937 315 197 7 32 346 41 325 2.89e-27 112
MS.gene006547.t1 AT1G54730 26.121 379 224 9 28 399 42 371 1.35e-26 111
MS.gene006547.t1 AT1G54730 28.975 283 176 6 28 309 42 300 9.44e-24 102
MS.gene006547.t1 AT1G54730 28.975 283 176 6 28 309 42 300 9.44e-24 102
MS.gene006547.t1 AT1G20840 34.123 211 121 5 28 236 14 208 3.74e-21 97.4
MS.gene006547.t1 AT1G20840 31.731 208 130 3 274 469 508 715 5.85e-17 84.3
MS.gene006547.t1 AT1G20840 34.123 211 121 5 28 236 14 208 3.74e-21 97.4
MS.gene006547.t1 AT1G20840 31.731 208 130 3 274 469 508 715 5.85e-17 84.3
MS.gene006547.t1 AT4G35300 34.634 205 117 7 28 224 14 209 3.59e-19 91.3
MS.gene006547.t1 AT4G35300 32.212 208 129 3 274 469 515 722 2.40e-18 88.6
MS.gene006547.t1 AT4G35300 34.634 205 117 7 28 224 14 209 3.59e-19 91.3
MS.gene006547.t1 AT4G35300 32.212 208 129 3 274 469 515 722 2.40e-18 88.6
MS.gene006547.t1 AT4G35300 34.634 205 117 7 28 224 14 209 3.59e-19 91.3
MS.gene006547.t1 AT4G35300 32.212 208 129 3 274 469 515 722 2.40e-18 88.6
MS.gene006547.t1 AT4G35300 34.634 205 117 7 28 224 14 209 3.59e-19 91.3
MS.gene006547.t1 AT4G35300 32.212 208 129 3 274 469 515 722 2.40e-18 88.6
MS.gene006547.t1 AT4G35300 34.634 205 117 7 28 224 14 209 3.59e-19 91.3
MS.gene006547.t1 AT4G35300 32.212 208 129 3 274 469 515 722 2.40e-18 88.6
MS.gene006547.t1 AT4G35300 34.634 205 117 7 28 224 14 209 3.59e-19 91.3
MS.gene006547.t1 AT4G35300 32.212 208 129 3 274 469 515 722 2.40e-18 88.6
MS.gene006547.t1 AT4G35300 34.634 205 117 7 28 224 14 209 3.59e-19 91.3
MS.gene006547.t1 AT4G35300 32.212 208 129 3 274 469 515 722 2.40e-18 88.6
MS.gene006547.t1 AT4G35300 34.634 205 117 7 28 224 14 209 3.65e-19 91.3
MS.gene006547.t1 AT4G35300 32.212 208 129 3 274 469 505 712 2.48e-18 88.6
MS.gene006547.t1 AT4G35300 34.634 205 117 7 28 224 14 209 3.65e-19 91.3
MS.gene006547.t1 AT4G35300 32.212 208 129 3 274 469 505 712 2.48e-18 88.6
MS.gene006547.t1 AT4G35300 34.634 205 117 7 28 224 14 209 3.65e-19 91.3
MS.gene006547.t1 AT4G35300 32.212 208 129 3 274 469 505 712 2.48e-18 88.6
MS.gene006547.t1 AT4G35300 32.212 208 129 3 274 469 318 525 2.17e-18 88.2
MS.gene006547.t1 AT3G51490 31.884 207 124 7 26 224 12 209 7.89e-18 87.0
MS.gene006547.t1 AT3G51490 28.302 212 138 4 267 469 502 708 2.44e-15 79.3
MS.gene006547.t1 AT3G51490 31.884 207 124 7 26 224 12 209 8.54e-18 87.0
MS.gene006547.t1 AT3G51490 28.372 215 142 4 267 469 502 716 1.22e-17 86.3
MS.gene006547.t1 AT3G51490 28.372 215 142 4 267 469 452 666 1.29e-17 86.3
MS.gene006547.t1 AT3G51490 33.962 159 99 4 71 224 2 159 2.43e-16 82.4
MS.gene006547.t1 AT1G79820 31.522 184 119 2 30 212 66 243 7.59e-17 83.2
MS.gene006547.t1 AT1G79820 35.802 162 101 1 312 470 278 439 2.35e-16 81.6
MS.gene006547.t1 AT1G79820 35.802 162 101 1 312 470 216 377 3.34e-16 80.5

Find 119 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTGTAAGCCCCTTGGTTTC+TGG 0.113255 4.4:+32947298 None:intergenic
TTTACGTGCTATACAGAAAA+AGG 0.163557 4.4:-32949082 MS.gene006547:CDS
TTACTACTTGGCGGAGTTTC+AGG 0.164053 4.4:-32948204 MS.gene006547:CDS
TATTCTCCTTGGTGTATTTA+AGG 0.200907 4.4:-32948562 MS.gene006547:intron
GGTAATCTCATTATTCTTAC+TGG 0.215288 4.4:-32948009 MS.gene006547:CDS
AGATTTCTCTTCCCAGCTTT+TGG 0.224004 4.4:-32952086 MS.gene006547:CDS
TTCAATATTGCTGATTTCTT+AGG 0.227293 4.4:-32950566 MS.gene006547:intron
TCATTATATGGTGCCTTAAT+AGG 0.228572 4.4:-32950602 MS.gene006547:CDS
GACTTAGACGCTGTTGAAAT+TGG 0.258547 4.4:-32950784 MS.gene006547:CDS
CTCTACTTTACAGGATTTAC+TGG 0.274020 4.4:-32947392 MS.gene006547:intron
AAAGAGTTCTTTATAGTAAT+CGG 0.294855 4.4:-32949446 MS.gene006547:CDS
TTTATTGGTGATTGGGAGAT+TGG 0.298663 4.4:-32950383 MS.gene006547:CDS
GTGATTGGGAGATTGGTATT+TGG 0.307535 4.4:-32950376 MS.gene006547:CDS
GCTCTATGTTGGTTGTTATC+AGG 0.308785 4.4:-32947931 MS.gene006547:intron
TAGTGCAACAATTTCCATTC+AGG 0.310363 4.4:-32952027 MS.gene006547:intron
ATCACCAATAAAGGAAAATT+AGG 0.310660 4.4:+32950394 None:intergenic
TAGTCCTGTTGCAGTAATAA+TGG 0.310720 4.4:-32949148 MS.gene006547:CDS
TTGGTATTTGGCATAGGAAT+TGG 0.315973 4.4:-32950364 MS.gene006547:CDS
CACAATTTCGTTACCTTCAG+TGG 0.329961 4.4:+32947622 None:intergenic
AAGACGATGAAATATAAAAT+AGG 0.334824 4.4:-32952152 None:intergenic
CTACTATTTGGATATGATAT+TGG 0.335588 4.4:-32952059 MS.gene006547:CDS
GTTGCAGTAATAATGGGATT+TGG 0.338250 4.4:-32949141 MS.gene006547:CDS
CAGACTAGCGGATCATTATA+TGG 0.341799 4.4:-32950614 MS.gene006547:CDS
AATCTCCCAATCACCAATAA+AGG 0.355733 4.4:+32950385 None:intergenic
GGGTTCGTATTACATATTCT+TGG 0.359010 4.4:-32947988 MS.gene006547:CDS
GAAGAAAATGATGTTACCTT+AGG 0.368047 4.4:-32948937 MS.gene006547:CDS
TCAGCAAGTAGATGAGATTA+TGG 0.386547 4.4:-32948980 MS.gene006547:CDS
GGCCAACACAGAGCCTATTA+AGG 0.394009 4.4:+32950589 None:intergenic
CGTAGTTTGTGCCAGCTTCA+AGG 0.400533 4.4:-32949027 MS.gene006547:CDS
AGTATCCACCTTGGAGAAGC+TGG 0.401630 4.4:+32949105 None:intergenic
TCAGATTTCCTTTGGTCCGA+TGG 0.401941 4.4:-32947755 MS.gene006547:intron
CGTTACCTTCAGTGGGGAAA+AGG 0.405272 4.4:+32947630 None:intergenic
AAGAAAATGATGTTACCTTA+GGG 0.418967 4.4:-32948936 MS.gene006547:CDS
AATCCCATTATTACTGCAAC+AGG 0.420607 4.4:+32949144 None:intergenic
GCTGGATGGCGGTATATGTT+TGG 0.420780 4.4:-32949177 MS.gene006547:CDS
GCAGCAGTTCTTGCTGTAGT+TGG 0.435391 4.4:-32947960 MS.gene006547:CDS
AGTCCTGTTGCAGTAATAAT+GGG 0.436387 4.4:-32949147 MS.gene006547:CDS
AGGATTGGTCTTGTTTCAAC+AGG 0.437529 4.4:-32948869 MS.gene006547:intron
GGAAGGAGACCTTTACTACT+TGG 0.445419 4.4:-32948216 MS.gene006547:CDS
TTGTTGGTAGACACTGTTGC+TGG 0.445619 4.4:-32949195 MS.gene006547:CDS
CAGATTTCCTTTGGTCCGAT+GGG 0.447732 4.4:-32947754 MS.gene006547:CDS
TAAGAAATCAGCAATATTGA+AGG 0.456894 4.4:+32950568 None:intergenic
TTCCTCTAGTGTAAGCCCCT+TGG 0.456973 4.4:+32947291 None:intergenic
AATAGTAGACCACCAAAAGC+TGG 0.457373 4.4:+32952074 None:intergenic
TTTCCTTTGGTCCGATGGGT+TGG 0.457492 4.4:-32947750 MS.gene006547:CDS
TAGGAGCGAATGCTGTTATG+AGG 0.458082 4.4:+32950413 None:intergenic
AGTAGAATGGTTTACCTGAA+TGG 0.459349 4.4:+32952013 None:intergenic
ACCCGGGTCTCTATTCTCCT+TGG 0.463268 4.4:-32948573 MS.gene006547:CDS
GCTGCATTGATGTATCTTGT+TGG 0.463538 4.4:-32950439 MS.gene006547:CDS
TTGTTGTAGTTGATTATGAC+TGG 0.472079 4.4:-32948267 MS.gene006547:intron
CCTTAGCAGCTGATGCTACC+CGG 0.472741 4.4:-32948590 MS.gene006547:CDS
TCCTTTGCCTCTCAAGCGTA+AGG 0.476886 4.4:+32947705 None:intergenic
GTTGGTTTGCTGCTCTATGT+TGG 0.484746 4.4:-32947942 MS.gene006547:CDS
TTACAGGATTTACTGGGAGC+AGG 0.487811 4.4:-32947385 MS.gene006547:intron
CCCTTACGCTTGAGAGGCAA+AGG 0.490580 4.4:-32947706 MS.gene006547:CDS
AATTAAATTTGGTAGAGTGC+AGG 0.496012 4.4:-32948618 MS.gene006547:intron
CCTTGTGATAAGTGCAGGAT+TGG 0.497659 4.4:-32948884 MS.gene006547:CDS
GGGAGATTGGTATTTGGCAT+AGG 0.499768 4.4:-32950370 MS.gene006547:CDS
CCGGGTAGCATCAGCTGCTA+AGG 0.501542 4.4:+32948590 None:intergenic
GTATGGACTAGGTAGCTTGT+TGG 0.505077 4.4:-32949211 MS.gene006547:CDS
TCCACGAAACATTTCCCCTA+AGG 0.509338 4.4:+32948921 None:intergenic
GAGACTAGTTGTCCACGTAT+TGG 0.510388 4.4:+32949473 None:intergenic
GGGAAAAGGCAAATGTAACC+AGG 0.512818 4.4:+32947644 None:intergenic
CATCACTAAGTGGAATAACT+TGG 0.514103 4.4:-32950810 MS.gene006547:CDS
GAAACTCCGCCAAGTAGTAA+AGG 0.514823 4.4:+32948207 None:intergenic
TGCAAACTGTGACAGATCAC+GGG 0.514877 4.4:-32948772 MS.gene006547:intron
GTATGTGTGCAGGCCGGGTA+TGG 0.515824 4.4:-32949228 MS.gene006547:intron
GTAATCTCATTATTCTTACT+GGG 0.518713 4.4:-32948008 MS.gene006547:CDS
CACCAAGGAGAATAGAGACC+CGG 0.519401 4.4:+32948571 None:intergenic
GTGCAGGCCGGGTATGGACT+AGG 0.520250 4.4:-32949222 MS.gene006547:intron
ACAATTTCGTTACCTTCAGT+GGG 0.521381 4.4:+32947623 None:intergenic
GAAATGTAGGACCTTGAAGC+TGG 0.527180 4.4:+32949016 None:intergenic
GAAGCAGAATCATGAAATGT+AGG 0.529348 4.4:+32949003 None:intergenic
ACCTTAGGGGAAATGTTTCG+TGG 0.531092 4.4:-32948922 MS.gene006547:CDS
AAGGCCCTTGTGATAAGTGC+AGG 0.536243 4.4:-32948889 MS.gene006547:CDS
TAATAATGGGATTTGGAATG+TGG 0.538557 4.4:-32949134 MS.gene006547:CDS
AGTTGTCCACGTATTGGCGT+TGG 0.540531 4.4:+32949479 None:intergenic
CTACGCCGCATCAATCCTAC+AGG 0.541755 4.4:-32948731 MS.gene006547:intron
TTGCAGTCACCATCACTAAG+TGG 0.543117 4.4:-32950820 MS.gene006547:intron
GGTGGCTTCCAGCTTCTCCA+AGG 0.556238 4.4:-32949113 MS.gene006547:CDS
GCTGTCTCTGCAATGTACAT+TGG 0.561804 4.4:+32949503 None:intergenic
CTTAGCAGCTGATGCTACCC+GGG 0.569831 4.4:-32948589 MS.gene006547:CDS
TCTACTTTACAGGATTTACT+GGG 0.572981 4.4:-32947391 MS.gene006547:intron
ATTTGGCATAGGAATTGGAC+TGG 0.574571 4.4:-32950359 MS.gene006547:intron
GTTGTCGTTGTTGACAGACT+TGG 0.575922 4.4:-32948237 MS.gene006547:CDS
GGCTTCCAGCTTCTCCAAGG+TGG 0.576554 4.4:-32949110 MS.gene006547:CDS
AACCAAGGGGCTTACACTAG+AGG 0.577868 4.4:-32947293 MS.gene006547:CDS
ATAGTAGACCACCAAAAGCT+GGG 0.579819 4.4:+32952075 None:intergenic
CCAATCCTGCACTTATCACA+AGG 0.580382 4.4:+32948884 None:intergenic
CAAGTTATTCCACTTAGTGA+TGG 0.590208 4.4:+32950811 None:intergenic
AAGCCAACCCATCGGACCAA+AGG 0.590961 4.4:+32947747 None:intergenic
AGGAGACCTTTACTACTTGG+CGG 0.596332 4.4:-32948213 MS.gene006547:CDS
GCGGCGTAGTAGAGAACACT+TGG 0.601819 4.4:+32948745 None:intergenic
TGCCTTAATAGGCTCTGTGT+TGG 0.602581 4.4:-32950591 MS.gene006547:CDS
CTTCATTGTACCAGAAACCA+AGG 0.608838 4.4:-32947308 MS.gene006547:CDS
CCTTTGCCTCTCAAGCGTAA+GGG 0.610550 4.4:+32947706 None:intergenic
AAATGTTTCGTGGAAAATGT+CGG 0.619683 4.4:-32948912 MS.gene006547:CDS
CAAGCTACCTAGTCCATACC+CGG 0.621967 4.4:+32949215 None:intergenic
AGGAGCGAATGCTGTTATGA+GGG 0.624609 4.4:+32950414 None:intergenic
GCACGTAAAAGTATCCACCT+TGG 0.625472 4.4:+32949096 None:intergenic
TGGTAGACACTGTTGCTGGA+TGG 0.626797 4.4:-32949191 MS.gene006547:CDS
GTAGTTGATTATGACTGGAG+TGG 0.632194 4.4:-32948262 MS.gene006547:intron
TAATGGGATTTGGAATGTGG+TGG 0.633278 4.4:-32949131 MS.gene006547:CDS
TTCATTGTACCAGAAACCAA+GGG 0.637151 4.4:-32947307 MS.gene006547:CDS
TCGTTGTTGACAGACTTGGA+AGG 0.641778 4.4:-32948233 MS.gene006547:CDS
GTTTCGTGGAAAATGTCGGA+AGG 0.645463 4.4:-32948908 MS.gene006547:CDS
ACAGCTCCAACGCCAATACG+TGG 0.658764 4.4:-32949485 MS.gene006547:CDS
GGAAATTGTTGCACTAGATG+TGG 0.659777 4.4:+32952034 None:intergenic
GCTATCATAAGCCAACCCAT+CGG 0.662767 4.4:+32947739 None:intergenic
ACCAAGGAGAATAGAGACCC+GGG 0.664447 4.4:+32948572 None:intergenic
TAACACCTGTAGGATTGATG+CGG 0.685551 4.4:+32948726 None:intergenic
CAATTTCGTTACCTTCAGTG+GGG 0.693048 4.4:+32947624 None:intergenic
AGAAAATGATGTTACCTTAG+GGG 0.697514 4.4:-32948935 MS.gene006547:CDS
TAGACACTGTTGCTGGATGG+CGG 0.699815 4.4:-32949188 MS.gene006547:CDS
AATCTACCTTAAATACACCA+AGG 0.704025 4.4:+32948556 None:intergenic
GGAAAAGGCAAATGTAACCA+GGG 0.704101 4.4:+32947645 None:intergenic
TCATTGTACCAGAAACCAAG+GGG 0.704520 4.4:-32947306 MS.gene006547:CDS
CAATCCTGCACTTATCACAA+GGG 0.713845 4.4:+32948885 None:intergenic
GCAAACTGTGACAGATCACG+GGG 0.731321 4.4:-32948771 MS.gene006547:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTATCCAATTAAATT+TGG - chr4.4:32950791-32950810 MS.gene006547:CDS 10.0%
!!! TGATAGATTTTTAAAATATA+TGG + chr4.4:32951833-32951852 None:intergenic 10.0%
!!! TGATATTTTTATAAAAACTT+AGG - chr4.4:32949486-32949505 MS.gene006547:CDS 10.0%
!! AACTTAGATAATTATATAAG+AGG - chr4.4:32951314-32951333 MS.gene006547:intron 15.0%
!! GTAAGTTTAAATTAAATTCT+TGG - chr4.4:32948666-32948685 MS.gene006547:intron 15.0%
!! TCATATTATATTGAAGTATA+TGG + chr4.4:32947604-32947623 None:intergenic 15.0%
!! TGAAAAATAAAATCACTAAA+TGG + chr4.4:32951648-32951667 None:intergenic 15.0%
!!! AATAGTTTCAACAATTTTTT+TGG - chr4.4:32949770-32949789 MS.gene006547:intron 15.0%
!!! AGATTTTTTAAACATGTTTT+AGG + chr4.4:32947313-32947332 None:intergenic 15.0%
!!! TGTTATGTTAATTTTAATCA+AGG - chr4.4:32950712-32950731 MS.gene006547:intron 15.0%
!! AAAATTAGATTTCACTATGA+AGG - chr4.4:32951006-32951025 MS.gene006547:intron 20.0%
!! AAAGAGTTCTTTATAGTAAT+CGG - chr4.4:32949974-32949993 MS.gene006547:intron 20.0%
!! AAATCATTCATAACAAAAAC+TGG + chr4.4:32947864-32947883 None:intergenic 20.0%
!! AAGAAAAATAAGACAGAAAA+AGG - chr4.4:32949624-32949643 MS.gene006547:intron 20.0%
!! AATATAAATCATGACATGAA+TGG + chr4.4:32951546-32951565 None:intergenic 20.0%
!! ATATACAACAAAATGTACAT+AGG + chr4.4:32948233-32948252 None:intergenic 20.0%
!! ATTAATACAAGTAATGATCA+TGG + chr4.4:32947627-32947646 None:intergenic 20.0%
!! CAAACCATGAAATTATTATA+TGG - chr4.4:32949130-32949149 MS.gene006547:CDS 20.0%
!! CAATATTTGTTCATTTGAAT+TGG - chr4.4:32951909-32951928 MS.gene006547:intron 20.0%
!! GTTTCCATATAATAATTTCA+TGG + chr4.4:32949137-32949156 None:intergenic 20.0%
!! TAGTATAATACATAGAAATG+TGG - chr4.4:32948451-32948470 MS.gene006547:intron 20.0%
!! TATACAACAAAATGTACATA+GGG + chr4.4:32948232-32948251 None:intergenic 20.0%
!! TATTAAATATACTGAAGTGT+TGG + chr4.4:32950620-32950639 None:intergenic 20.0%
!! TCTTACAACATCAAATATAT+TGG - chr4.4:32951886-32951905 MS.gene006547:intron 20.0%
!! TTTGAGAAATAAATAAGTTC+TGG + chr4.4:32948201-32948220 None:intergenic 20.0%
!!! ACATGACAAATTGTATTTTA+AGG - chr4.4:32948936-32948955 MS.gene006547:CDS 20.0%
!!! ATTTTACTTCAATAAACACA+AGG + chr4.4:32948411-32948430 None:intergenic 20.0%
!!! CATGACAAATTGTATTTTAA+GGG - chr4.4:32948937-32948956 MS.gene006547:CDS 20.0%
!!! TATAATTATCTAAGTTGAAG+CGG + chr4.4:32951310-32951329 None:intergenic 20.0%
!!! TTATTTTGTTGTATGTTTAG+TGG - chr4.4:32948548-32948567 MS.gene006547:intron 20.0%
!!! TTTATTTTTCAGATTTCCTT+TGG - chr4.4:32951657-32951676 MS.gene006547:intron 20.0%
!!! TTTGTTATGAATGATTTGTT+GGG - chr4.4:32947867-32947886 MS.gene006547:intron 20.0%
!!! TTTTGTTATGAATGATTTGT+TGG - chr4.4:32947866-32947885 MS.gene006547:intron 20.0%
! AAAAAGGATATAAACGTAAC+AGG - chr4.4:32949640-32949659 MS.gene006547:intron 25.0%
! AAAATTAACATAACACCTGT+AGG + chr4.4:32950707-32950726 None:intergenic 25.0%
! AAACGTTTCTTCTTAATTGT+TGG + chr4.4:32949244-32949263 None:intergenic 25.0%
! AAAGGTTAACTCTTTAATTC+TGG + chr4.4:32948155-32948174 None:intergenic 25.0%
! AAATATATATTGTACGTACC+CGG + chr4.4:32949439-32949458 None:intergenic 25.0%
! AACAATTTCAATGAAGTCAA+CGG + chr4.4:32951985-32952004 None:intergenic 25.0%
! AAGAAAATGATGTTACCTTA+GGG - chr4.4:32950484-32950503 MS.gene006547:intron 25.0%
! AAGCTCATATACTATTTGTT+GGG + chr4.4:32948021-32948040 None:intergenic 25.0%
! AATAAGAATATACAGGATAC+TGG + chr4.4:32947925-32947944 None:intergenic 25.0%
! ACCAAATGAAAATATTGAAG+CGG + chr4.4:32947445-32947464 None:intergenic 25.0%
! ATCACCAATAAAGGAAAATT+AGG + chr4.4:32949029-32949048 None:intergenic 25.0%
! ATGTGTAAGTACAAATACAA+AGG + chr4.4:32949323-32949342 None:intergenic 25.0%
! CTAAAAATGTTTCTTTCTCA+AGG + chr4.4:32951274-32951293 None:intergenic 25.0%
! CTACTATTTGGATATGATAT+TGG - chr4.4:32947361-32947380 MS.gene006547:CDS 25.0%
! GAAAATGAAATTCCATATCT+AGG + chr4.4:32951588-32951607 None:intergenic 25.0%
! GTAATCTCATTATTCTTACT+GGG - chr4.4:32951412-32951431 MS.gene006547:intron 25.0%
! GTAGGAATTATGATAAAAAG+TGG + chr4.4:32951612-32951631 None:intergenic 25.0%
! GTTCAAATTATAAGAACATG+TGG - chr4.4:32951374-32951393 MS.gene006547:intron 25.0%
! TAAATCTTAGAGTTGACATA+AGG + chr4.4:32949701-32949720 None:intergenic 25.0%
! TAAGAAATCAGCAATATTGA+AGG + chr4.4:32948855-32948874 None:intergenic 25.0%
! TTATCAATTACATATCACCA+TGG - chr4.4:32950755-32950774 MS.gene006547:intron 25.0%
!! AATAGTGTTATTACATTCCA+TGG + chr4.4:32950775-32950794 None:intergenic 25.0%
!! ATCTCTTTGTTGAGTTTTTA+CGG - chr4.4:32947723-32947742 MS.gene006547:CDS 25.0%
!!! AAAGTTCTGGAAATTATTAC+AGG + chr4.4:32947477-32947496 None:intergenic 25.0%
!!! AATTTTCCTTTATTGGTGAT+TGG - chr4.4:32949029-32949048 MS.gene006547:CDS 25.0%
!!! ATTTTCCTTTATTGGTGATT+GGG - chr4.4:32949030-32949049 MS.gene006547:CDS 25.0%
!!! GTTTTTGAAGAAGCAAAATA+GGG - chr4.4:32949461-32949480 MS.gene006547:CDS 25.0%
!!! TCTCAACTGATTTTTATCAA+CGG - chr4.4:32949343-32949362 MS.gene006547:intron 25.0%
!!! TGTTTTTGAAGAAGCAAAAT+AGG - chr4.4:32949460-32949479 MS.gene006547:CDS 25.0%
!!! TTCAATATTGCTGATTTCTT+AGG - chr4.4:32948854-32948873 MS.gene006547:intron 25.0%
!!! TTTTCCATGCTTTATTTGTA+AGG - chr4.4:32947574-32947593 MS.gene006547:intron 25.0%
AAATGTTTCGTGGAAAATGT+CGG - chr4.4:32950508-32950527 MS.gene006547:intron 30.0%
AACACCTTACAAATAAAGCA+TGG + chr4.4:32947581-32947600 None:intergenic 30.0%
AACTTACTGCGTTATTAACA+AGG + chr4.4:32951079-32951098 None:intergenic 30.0%
AACTTTATATCTACGTTGCA+TGG - chr4.4:32949393-32949412 MS.gene006547:intron 30.0%
AAGGTAACGAAATTGTGAAA+AGG - chr4.4:32951804-32951823 MS.gene006547:intron 30.0%
AATCTACCTTAAATACACCA+AGG + chr4.4:32950867-32950886 None:intergenic 30.0%
AATTAAATTTGGTAGAGTGC+AGG - chr4.4:32950802-32950821 MS.gene006547:CDS 30.0%
ACGTAGATATAAAGTTTCAG+TGG + chr4.4:32949389-32949408 None:intergenic 30.0%
AGAAAATGATGTTACCTTAG+GGG - chr4.4:32950485-32950504 MS.gene006547:intron 30.0%
AGAACAGACATGAAAATTCA+AGG + chr4.4:32950034-32950053 None:intergenic 30.0%
AGTAAATCCTGTAAAGTAGA+GGG + chr4.4:32952029-32952048 None:intergenic 30.0%
ATACTATGAGATCATACTTC+TGG + chr4.4:32947548-32947567 None:intergenic 30.0%
ATATGATCACATCATGTAGA+TGG + chr4.4:32951112-32951131 None:intergenic 30.0%
ATTCTCGATTGCAACATTAA+CGG + chr4.4:32949753-32949772 None:intergenic 30.0%
ATTGAAGAAGCTTTACATGA+AGG + chr4.4:32950101-32950120 None:intergenic 30.0%
CAACAAATAGTATATGAGCT+TGG - chr4.4:32948020-32948039 MS.gene006547:intron 30.0%
CAAGCTCATATACTATTTGT+TGG + chr4.4:32948022-32948041 None:intergenic 30.0%
GAAATAGAAAGGAGATAGAA+AGG + chr4.4:32951253-32951272 None:intergenic 30.0%
GAAGAAAATGATGTTACCTT+AGG - chr4.4:32950483-32950502 MS.gene006547:intron 30.0%
GATGGCAAATAAGAATATAC+AGG + chr4.4:32947932-32947951 None:intergenic 30.0%
GGCAAGCTAAATTTATAACT+TGG + chr4.4:32951058-32951077 None:intergenic 30.0%
GGTAATCTCATTATTCTTAC+TGG - chr4.4:32951411-32951430 MS.gene006547:intron 30.0%
GTATCAAAAGTAGAGTAGAA+TGG + chr4.4:32947423-32947442 None:intergenic 30.0%
TAAGACTGAAATTACGTTAC+CGG + chr4.4:32947692-32947711 None:intergenic 30.0%
TCAACTACAACAAAAACAGA+AGG + chr4.4:32951146-32951165 None:intergenic 30.0%
TCATTATATGGTGCCTTAAT+AGG - chr4.4:32948818-32948837 MS.gene006547:intron 30.0%
TCTACTTTACAGGATTTACT+GGG - chr4.4:32952029-32952048 MS.gene006547:CDS 30.0%
TGCACTCTACCAAATTTAAT+TGG + chr4.4:32950803-32950822 None:intergenic 30.0%
TTAACATCACATGTATGTCA+AGG - chr4.4:32950968-32950987 MS.gene006547:intron 30.0%
TTACGTGCTATACAGAAAAA+GGG - chr4.4:32950339-32950358 MS.gene006547:intron 30.0%
TTGTTGTAGTTGATTATGAC+TGG - chr4.4:32951153-32951172 MS.gene006547:intron 30.0%
TTTACGTGCTATACAGAAAA+AGG - chr4.4:32950338-32950357 MS.gene006547:intron 30.0%
! AAATGTGGATTTTTATGCTG+AGG - chr4.4:32948466-32948485 MS.gene006547:intron 30.0%
! ACCGCTTCAATATTTTCATT+TGG - chr4.4:32947441-32947460 MS.gene006547:intron 30.0%
! AGTTTTTACGGTGTCTATAT+TGG - chr4.4:32947735-32947754 MS.gene006547:CDS 30.0%
! ATAAATAAGTTCTGGCGTAA+AGG + chr4.4:32948193-32948212 None:intergenic 30.0%
! GCTTCAATATTTTCATTTGG+TGG - chr4.4:32947444-32947463 MS.gene006547:intron 30.0%
! TAAATAAGTTCTGGCGTAAA+GGG + chr4.4:32948192-32948211 None:intergenic 30.0%
! TAATAATGGGATTTGGAATG+TGG - chr4.4:32950286-32950305 MS.gene006547:intron 30.0%
! TATTCTCCTTGGTGTATTTA+AGG - chr4.4:32950858-32950877 MS.gene006547:intron 30.0%
! TCTTATTTGCCATCTCTTAT+TGG - chr4.4:32947938-32947957 MS.gene006547:CDS 30.0%
!! ACTCTTAGTCTTATTGGAAT+AGG - chr4.4:32949104-32949123 MS.gene006547:CDS 30.0%
!! ATGGCAGAGTTTTCTTATTT+AGG - chr4.4:32950459-32950478 MS.gene006547:CDS 30.0%
!! CATTTTAGTCAACACAGAAA+TGG - chr4.4:32947977-32947996 MS.gene006547:CDS 30.0%
!! TTCTTGGTTTGTTCTTTACT+TGG - chr4.4:32948682-32948701 MS.gene006547:intron 30.0%
!!! ATGTTGTTTTCACCTAGATA+TGG - chr4.4:32951573-32951592 MS.gene006547:intron 30.0%
!!! TCCTACGTCTATTTTGATTT+GGG + chr4.4:32949597-32949616 None:intergenic 30.0%
!!! TTCCTACGTCTATTTTGATT+TGG + chr4.4:32949598-32949617 None:intergenic 30.0%
AAGACTGAAATTACGTTACC+GGG + chr4.4:32947691-32947710 None:intergenic 35.0%
AAGTGTAAAAGCAGTACAAC+AGG - chr4.4:32947800-32947819 MS.gene006547:intron 35.0%
AATCCCATTATTACTGCAAC+AGG + chr4.4:32950279-32950298 None:intergenic 35.0%
AATCTCCCAATCACCAATAA+AGG + chr4.4:32949038-32949057 None:intergenic 35.0%
ACAATTTCGTTACCTTCAGT+GGG + chr4.4:32951800-32951819 None:intergenic 35.0%
ACAGAAATGGACATTTGTTC+TGG - chr4.4:32947990-32948009 MS.gene006547:CDS 35.0%
ACTATGAAGGAATTCTTCAG+GGG - chr4.4:32951019-32951038 MS.gene006547:intron 35.0%
ACTTATTGCTATGGTTCCTT+AGG + chr4.4:32948046-32948065 None:intergenic 35.0%
AGAACATGTGGTTATTTGTG+TGG - chr4.4:32951386-32951405 MS.gene006547:intron 35.0%
AGAATGACACCAATAAGAGA+TGG + chr4.4:32947950-32947969 None:intergenic 35.0%
AGTAGAATGGTTTACCTGAA+TGG + chr4.4:32947410-32947429 None:intergenic 35.0%
AGTCCTGTTGCAGTAATAAT+GGG - chr4.4:32950273-32950292 MS.gene006547:intron 35.0%
AGTTCCATCACTTATTGCTA+TGG + chr4.4:32948055-32948074 None:intergenic 35.0%
ATATCTACGTTGCATGGATA+CGG - chr4.4:32949399-32949418 MS.gene006547:intron 35.0%
ATCACTAAATGGTGTAAGCA+TGG + chr4.4:32951637-32951656 None:intergenic 35.0%
ATCTACCCACAACTTCTAAT+GGG + chr4.4:32947776-32947795 None:intergenic 35.0%
ATTATATGGAAACTGCTGCT+GGG - chr4.4:32949144-32949163 MS.gene006547:CDS 35.0%
ATTTGAACTTCATCGACAAC+TGG + chr4.4:32951362-32951381 None:intergenic 35.0%
CAACAGTACAGCAGAAAAAT+CGG + chr4.4:32947507-32947526 None:intergenic 35.0%
CAAGTTATTCCACTTAGTGA+TGG + chr4.4:32948612-32948631 None:intergenic 35.0%
CACTATGAAGGAATTCTTCA+GGG - chr4.4:32951018-32951037 MS.gene006547:intron 35.0%
CAGTAAATCCTGTAAAGTAG+AGG + chr4.4:32952030-32952049 None:intergenic 35.0%
CATCACTAAGTGGAATAACT+TGG - chr4.4:32948610-32948629 MS.gene006547:intron 35.0%
CTCTACTTTACAGGATTTAC+TGG - chr4.4:32952028-32952047 MS.gene006547:CDS 35.0%
GAAGCAGAATCATGAAATGT+AGG + chr4.4:32950420-32950439 None:intergenic 35.0%
GGGTTCGTATTACATATTCT+TGG - chr4.4:32951432-32951451 MS.gene006547:intron 35.0%
TACGTGCTATACAGAAAAAG+GGG - chr4.4:32950340-32950359 MS.gene006547:intron 35.0%
TAGTCCTGTTGCAGTAATAA+TGG - chr4.4:32950272-32950291 MS.gene006547:intron 35.0%
TAGTGCAACAATTTCCATTC+AGG - chr4.4:32947393-32947412 MS.gene006547:intron 35.0%
TATCTACCCACAACTTCTAA+TGG + chr4.4:32947777-32947796 None:intergenic 35.0%
TATTATATGGAAACTGCTGC+TGG - chr4.4:32949143-32949162 MS.gene006547:CDS 35.0%
TCACTATGAAGGAATTCTTC+AGG - chr4.4:32951017-32951036 MS.gene006547:intron 35.0%
TCAGCAAGTAGATGAGATTA+TGG - chr4.4:32950440-32950459 MS.gene006547:CDS 35.0%
TCAGTCAAAGTGACACAAAA+AGG + chr4.4:32948492-32948511 None:intergenic 35.0%
TCGTGGATGAAATAATGAGA+GGG + chr4.4:32948335-32948354 None:intergenic 35.0%
TTAGATATAGTATCCTTCCC+AGG - chr4.4:32948905-32948924 MS.gene006547:CDS 35.0%
TTCATTGTACCAGAAACCAA+GGG - chr4.4:32952113-32952132 MS.gene006547:CDS 35.0%
TTGGTATTTGGCATAGGAAT+TGG - chr4.4:32949056-32949075 MS.gene006547:CDS 35.0%
! AAGAGTTAACCTTTTCTCGA+AGG - chr4.4:32948161-32948180 MS.gene006547:intron 35.0%
! CATATTTTCTGCAATAGCTG+TGG - chr4.4:32952070-32952089 MS.gene006547:CDS 35.0%
! CGCTCCTAATTTTCCTTTAT+TGG - chr4.4:32949022-32949041 MS.gene006547:CDS 35.0%
! CTGATTTTTATCAACGGTCT+AGG - chr4.4:32949349-32949368 MS.gene006547:intron 35.0%
! GGAACATATGATGGAGAAAA+GGG - chr4.4:32947830-32947849 MS.gene006547:intron 35.0%
! GTGTTCATTCCATCTCTTTT+AGG - chr4.4:32949880-32949899 MS.gene006547:intron 35.0%
! GTTGCAGTAATAATGGGATT+TGG - chr4.4:32950279-32950298 MS.gene006547:intron 35.0%
! TAAGTGATGGAACTTGGAAA+TGG - chr4.4:32948061-32948080 MS.gene006547:intron 35.0%
! TAGCAATAAGTGATGGAACT+TGG - chr4.4:32948055-32948074 MS.gene006547:intron 35.0%
! TGGAACATATGATGGAGAAA+AGG - chr4.4:32947829-32947848 MS.gene006547:intron 35.0%
! TGTAAGTTCTCGAACTTTTC+TGG - chr4.4:32950003-32950022 MS.gene006547:intron 35.0%
! TTTATTGGTGATTGGGAGAT+TGG - chr4.4:32949037-32949056 MS.gene006547:CDS 35.0%
! TTTTCATTGCGTGATAGAAC+TGG - chr4.4:32948375-32948394 MS.gene006547:intron 35.0%
!! AATCGGAATCTCTAAAGTTC+TGG + chr4.4:32947490-32947509 None:intergenic 35.0%
!! CTTCCAGGTGTTACTAAAAA+TGG - chr4.4:32950158-32950177 MS.gene006547:intron 35.0%
!! TGTTGTACTGCTTTTACACT+TGG + chr4.4:32947801-32947820 None:intergenic 35.0%
!!! CCTACGTCTATTTTGATTTG+GGG + chr4.4:32949596-32949615 None:intergenic 35.0%
!!! GTTTTTTCCCTCTACTTTAC+AGG - chr4.4:32952019-32952038 MS.gene006547:intron 35.0%
!!! TGGTATGCTCTTTTTTATGC+TGG - chr4.4:32949081-32949100 MS.gene006547:CDS 35.0%
AACGTAACAGGAGTCTGATA+CGG - chr4.4:32949652-32949671 MS.gene006547:intron 40.0%
AATAGTAGACCACCAAAAGC+TGG + chr4.4:32947349-32947368 None:intergenic 40.0%
AATGGTGTAAGCATGGATGT+AGG + chr4.4:32951630-32951649 None:intergenic 40.0%
ACGTGCTATACAGAAAAAGG+GGG - chr4.4:32950341-32950360 MS.gene006547:intron 40.0%
AGACAACAAGAAGTTAGGAG+GGG + chr4.4:32948283-32948302 None:intergenic 40.0%
AGGGAAAAACCTTCGAGAAA+AGG + chr4.4:32948173-32948192 None:intergenic 40.0%
ATAGTAGACCACCAAAAGCT+GGG + chr4.4:32947348-32947367 None:intergenic 40.0%
ATGAGAGGGAGAAGAGAATA+TGG + chr4.4:32948321-32948340 None:intergenic 40.0%
ATGCAAACTGTGACAGATCA+CGG - chr4.4:32950647-32950666 MS.gene006547:intron 40.0%
ATTTGGCATAGGAATTGGAC+TGG - chr4.4:32949061-32949080 MS.gene006547:CDS 40.0%
CAATCCTGCACTTATCACAA+GGG + chr4.4:32950538-32950557 None:intergenic 40.0%
CAATTTCGTTACCTTCAGTG+GGG + chr4.4:32951799-32951818 None:intergenic 40.0%
CACAATTTCGTTACCTTCAG+TGG + chr4.4:32951801-32951820 None:intergenic 40.0%
CATGCATTGCCTAAAAGAGA+TGG + chr4.4:32949892-32949911 None:intergenic 40.0%
CCCCAAATCAAAATAGACGT+AGG - chr4.4:32949593-32949612 MS.gene006547:intron 40.0%
CTACACTGTTAGTAAAGTCG+TGG + chr4.4:32948352-32948371 None:intergenic 40.0%
CTACGAGACAACAAGAAGTT+AGG + chr4.4:32948288-32948307 None:intergenic 40.0%
CTTCATTGTACCAGAAACCA+AGG - chr4.4:32952112-32952131 MS.gene006547:CDS 40.0%
GACTTAGACGCTGTTGAAAT+TGG - chr4.4:32948636-32948655 MS.gene006547:intron 40.0%
GAGACAACAAGAAGTTAGGA+GGG + chr4.4:32948284-32948303 None:intergenic 40.0%
GCTTTACATGAAGGAGTAGA+AGG + chr4.4:32950092-32950111 None:intergenic 40.0%
GGAAAAGGCAAATGTAACCA+GGG + chr4.4:32951778-32951797 None:intergenic 40.0%
GGAAATTGTTGCACTAGATG+TGG + chr4.4:32947389-32947408 None:intergenic 40.0%
GGAACCATAGCAATAAGTGA+TGG - chr4.4:32948048-32948067 MS.gene006547:intron 40.0%
GGTCATCTTGGAACATATGA+TGG - chr4.4:32947821-32947840 MS.gene006547:intron 40.0%
GTAGTTGATTATGACTGGAG+TGG - chr4.4:32951158-32951177 MS.gene006547:intron 40.0%
GTCGTGGATGAAATAATGAG+AGG + chr4.4:32948336-32948355 None:intergenic 40.0%
GTGATTGGGAGATTGGTATT+TGG - chr4.4:32949044-32949063 MS.gene006547:CDS 40.0%
TAACACCTGTAGGATTGATG+CGG + chr4.4:32950697-32950716 None:intergenic 40.0%
TAGTATATGAGCTTGGCCTA+AGG - chr4.4:32948027-32948046 MS.gene006547:intron 40.0%
TATCTACGTTGCATGGATAC+GGG - chr4.4:32949400-32949419 MS.gene006547:intron 40.0%
TCATTGTACCAGAAACCAAG+GGG - chr4.4:32952114-32952133 MS.gene006547:CDS 40.0%
TCTACCCACAACTTCTAATG+GGG + chr4.4:32947775-32947794 None:intergenic 40.0%
TTTCCCCCATTAGAAGTTGT+GGG - chr4.4:32947768-32947787 MS.gene006547:intron 40.0%
! AGATTTCTCTTCCCAGCTTT+TGG - chr4.4:32947334-32947353 MS.gene006547:CDS 40.0%
! AGCAGTTCTCGTCAATTTTG+CGG - chr4.4:32951746-32951765 MS.gene006547:intron 40.0%
! AGTGATGGTGACTGCAAATA+AGG + chr4.4:32948597-32948616 None:intergenic 40.0%
! ATTTTTCCCTTACGCTTGAG+AGG - chr4.4:32951708-32951727 MS.gene006547:intron 40.0%
! CAGACTAGCGGATCATTATA+TGG - chr4.4:32948806-32948825 MS.gene006547:intron 40.0%
! GCTCTATGTTGGTTGTTATC+AGG - chr4.4:32951489-32951508 MS.gene006547:intron 40.0%
! GCTGCATTGATGTATCTTGT+TGG - chr4.4:32948981-32949000 MS.gene006547:CDS 40.0%
! GTGATGGTGACTGCAAATAA+GGG + chr4.4:32948596-32948615 None:intergenic 40.0%
! TAATGGGATTTGGAATGTGG+TGG - chr4.4:32950289-32950308 MS.gene006547:intron 40.0%
! TACGGGTACAACATGAGTTT+TGG - chr4.4:32949670-32949689 MS.gene006547:intron 40.0%
! TGATGTCTTTTGCAGACTAG+CGG - chr4.4:32948794-32948813 MS.gene006547:intron 40.0%
! TTTTCCCCCATTAGAAGTTG+TGG - chr4.4:32947767-32947786 MS.gene006547:intron 40.0%
!! AGGATTGGTCTTGTTTCAAC+AGG - chr4.4:32950551-32950570 MS.gene006547:intron 40.0%
!! GAGGGATTAGTTAGGAGAAA+AGG + chr4.4:32948256-32948275 None:intergenic 40.0%
!! GCTTTTGGTGGTCTACTATT+TGG - chr4.4:32947349-32947368 MS.gene006547:CDS 40.0%
!! TGCTGGACTCTTAGTCTTAT+TGG - chr4.4:32949098-32949117 MS.gene006547:CDS 40.0%
!!! TGGCCATTTTTAGTAACACC+TGG + chr4.4:32950164-32950183 None:intergenic 40.0%
ACCTTAGGGGAAATGTTTCG+TGG - chr4.4:32950498-32950517 MS.gene006547:intron 45.0%
ACGTAACAGGAGTCTGATAC+GGG - chr4.4:32949653-32949672 MS.gene006547:intron 45.0%
AGCAGTACAACAGGTCATCT+TGG - chr4.4:32947809-32947828 MS.gene006547:intron 45.0%
AGGAGACCTTTACTACTTGG+CGG - chr4.4:32951207-32951226 MS.gene006547:intron 45.0%
AGGAGCGAATGCTGTTATGA+GGG + chr4.4:32949009-32949028 None:intergenic 45.0%
ATATTGTACGTACCCGGTAC+CGG + chr4.4:32949433-32949452 None:intergenic 45.0%
ATCACCTGAATCCATGTCAG+AGG - chr4.4:32947663-32947682 MS.gene006547:CDS 45.0%
CAGATTTCCTTTGGTCCGAT+GGG - chr4.4:32951666-32951685 MS.gene006547:intron 45.0%
CATATGTTGCGTATGTGTGC+AGG - chr4.4:32950182-32950201 MS.gene006547:intron 45.0%
CATGTGGTTATTTGTGTGGC+AGG - chr4.4:32951390-32951409 MS.gene006547:intron 45.0%
CCAATCCTGCACTTATCACA+AGG + chr4.4:32950539-32950558 None:intergenic 45.0%
CCTTGTGATAAGTGCAGGAT+TGG - chr4.4:32950536-32950555 MS.gene006547:intron 45.0%
CGAGACAACAAGAAGTTAGG+AGG + chr4.4:32948285-32948304 None:intergenic 45.0%
CTACCCACAACTTCTAATGG+GGG + chr4.4:32947774-32947793 None:intergenic 45.0%
CTGCACACATACGCAACATA+TGG + chr4.4:32950184-32950203 None:intergenic 45.0%
GAAACTCCGCCAAGTAGTAA+AGG + chr4.4:32951216-32951235 None:intergenic 45.0%
GAAATGTAGGACCTTGAAGC+TGG + chr4.4:32950407-32950426 None:intergenic 45.0%
GCTATCATAAGCCAACCCAT+CGG + chr4.4:32951684-32951703 None:intergenic 45.0%
GCTGTCTCTGCAATGTACAT+TGG + chr4.4:32949920-32949939 None:intergenic 45.0%
GGAAGGAGACCTTTACTACT+TGG - chr4.4:32951204-32951223 MS.gene006547:intron 45.0%
GGGAAAAGGCAAATGTAACC+AGG + chr4.4:32951779-32951798 None:intergenic 45.0%
GGGAGATTGGTATTTGGCAT+AGG - chr4.4:32949050-32949069 MS.gene006547:CDS 45.0%
GTTGTCGTTGTTGACAGACT+TGG - chr4.4:32951183-32951202 MS.gene006547:intron 45.0%
GTTTCGTGGAAAATGTCGGA+AGG - chr4.4:32950512-32950531 MS.gene006547:intron 45.0%
TAGGAGCGAATGCTGTTATG+AGG + chr4.4:32949010-32949029 None:intergenic 45.0%
TCAGATTTCCTTTGGTCCGA+TGG - chr4.4:32951665-32951684 MS.gene006547:intron 45.0%
TCCACGAAACATTTCCCCTA+AGG + chr4.4:32950502-32950521 None:intergenic 45.0%
TCGTTGTTGACAGACTTGGA+AGG - chr4.4:32951187-32951206 MS.gene006547:intron 45.0%
TGCAAACTGTGACAGATCAC+GGG - chr4.4:32950648-32950667 MS.gene006547:intron 45.0%
TGCCTTAATAGGCTCTGTGT+TGG - chr4.4:32948829-32948848 MS.gene006547:intron 45.0%
TTACAGGATTTACTGGGAGC+AGG - chr4.4:32952035-32952054 MS.gene006547:CDS 45.0%
TTACTACTTGGCGGAGTTTC+AGG - chr4.4:32951216-32951235 MS.gene006547:intron 45.0%
TTGCAGTCACCATCACTAAG+TGG - chr4.4:32948600-32948619 MS.gene006547:CDS 45.0%
TTGTCATGTCAGCTTCACCT+GGG + chr4.4:32948925-32948944 None:intergenic 45.0%
TTTGTCATGTCAGCTTCACC+TGG + chr4.4:32948926-32948945 None:intergenic 45.0%
! AGAAGTTAGGAGGGGTTTTG+AGG + chr4.4:32948275-32948294 None:intergenic 45.0%
! ATTTGCCTTTTCCCCACTGA+AGG - chr4.4:32951785-32951804 MS.gene006547:intron 45.0%
! GAGACTAGTTGTCCACGTAT+TGG + chr4.4:32949950-32949969 None:intergenic 45.0%
! TTGTTGGTAGACACTGTTGC+TGG - chr4.4:32950225-32950244 MS.gene006547:intron 45.0%
! TTTCTCTTCCCAGCTTTTGG+TGG - chr4.4:32947337-32947356 MS.gene006547:CDS 45.0%
!! GAAGTTAGGAGGGGTTTTGA+GGG + chr4.4:32948274-32948293 None:intergenic 45.0%
!! GCACGTAAAAGTATCCACCT+TGG + chr4.4:32950327-32950346 None:intergenic 45.0%
!! GTATGGACTAGGTAGCTTGT+TGG - chr4.4:32950209-32950228 MS.gene006547:intron 45.0%
!! GTTGGTTTGCTGCTCTATGT+TGG - chr4.4:32951478-32951497 MS.gene006547:intron 45.0%
!!! GGGGTTTTGAGGGATTAGTT+AGG + chr4.4:32948264-32948283 None:intergenic 45.0%
AACCAAGGGGCTTACACTAG+AGG - chr4.4:32952127-32952146 MS.gene006547:CDS 50.0%
AAGGCCCTTGTGATAAGTGC+AGG - chr4.4:32950531-32950550 MS.gene006547:intron 50.0%
ACCAAGGAGAATAGAGACCC+GGG + chr4.4:32950851-32950870 None:intergenic 50.0%
ACCTGGAAGCTCAGAACAGA+AGG + chr4.4:32950147-32950166 None:intergenic 50.0%
AGTATCCACCTTGGAGAAGC+TGG + chr4.4:32950318-32950337 None:intergenic 50.0%
AGTGTAAGCCCCTTGGTTTC+TGG + chr4.4:32952125-32952144 None:intergenic 50.0%
CAAGCTACCTAGTCCATACC+CGG + chr4.4:32950208-32950227 None:intergenic 50.0%
CACCAAGGAGAATAGAGACC+CGG + chr4.4:32950852-32950871 None:intergenic 50.0%
CATGGATACGGGTACAGTAC+CGG - chr4.4:32949411-32949430 MS.gene006547:intron 50.0%
CCTTTGCCTCTCAAGCGTAA+GGG + chr4.4:32951717-32951736 None:intergenic 50.0%
CGTTACCTTCAGTGGGGAAA+AGG + chr4.4:32951793-32951812 None:intergenic 50.0%
GCAAACTGTGACAGATCACG+GGG - chr4.4:32950649-32950668 MS.gene006547:intron 50.0%
GGCCAACACAGAGCCTATTA+AGG + chr4.4:32948834-32948853 None:intergenic 50.0%
TAGACACTGTTGCTGGATGG+CGG - chr4.4:32950232-32950251 MS.gene006547:intron 50.0%
TCCTTTGCCTCTCAAGCGTA+AGG + chr4.4:32951718-32951737 None:intergenic 50.0%
TGGTAGACACTGTTGCTGGA+TGG - chr4.4:32950229-32950248 MS.gene006547:intron 50.0%
TTCCTCTAGTGTAAGCCCCT+TGG + chr4.4:32952132-32952151 None:intergenic 50.0%
TTTCCTTTGGTCCGATGGGT+TGG - chr4.4:32951670-32951689 MS.gene006547:intron 50.0%
! ACCTTCTGTTCTGAGCTTCC+AGG - chr4.4:32950143-32950162 MS.gene006547:intron 50.0%
! AGTTGTCCACGTATTGGCGT+TGG + chr4.4:32949944-32949963 None:intergenic 50.0%
! CAATTTTGCGGCAAATGCCC+TGG - chr4.4:32951758-32951777 MS.gene006547:intron 50.0%
! CGTAGTTTGTGCCAGCTTCA+AGG - chr4.4:32950393-32950412 MS.gene006547:CDS 50.0%
! GCAGCAGTTCTTGCTGTAGT+TGG - chr4.4:32951460-32951479 MS.gene006547:intron 50.0%
! GCTGGATGGCGGTATATGTT+TGG - chr4.4:32950243-32950262 MS.gene006547:intron 50.0%
AAGCCAACCCATCGGACCAA+AGG + chr4.4:32951676-32951695 None:intergenic 55.0%
ACAGCTCCAACGCCAATACG+TGG - chr4.4:32949935-32949954 MS.gene006547:intron 55.0%
ACCCGGGTCTCTATTCTCCT+TGG - chr4.4:32950847-32950866 MS.gene006547:intron 55.0%
CATGTCAGCTTCACCTGGGA+AGG + chr4.4:32948921-32948940 None:intergenic 55.0%
CCCTTACGCTTGAGAGGCAA+AGG - chr4.4:32951714-32951733 MS.gene006547:intron 55.0%
CCTTAGCAGCTGATGCTACC+CGG - chr4.4:32950830-32950849 MS.gene006547:intron 55.0%
CTACGCCGCATCAATCCTAC+AGG - chr4.4:32950689-32950708 MS.gene006547:intron 55.0%
CTTAGCAGCTGATGCTACCC+GGG - chr4.4:32950831-32950850 MS.gene006547:intron 55.0%
GCGGCGTAGTAGAGAACACT+TGG + chr4.4:32950678-32950697 None:intergenic 55.0%
GGTGCCTCTGACATGGATTC+AGG + chr4.4:32947670-32947689 None:intergenic 55.0%
TGTTGCGTATGTGTGCAGGC+CGG - chr4.4:32950186-32950205 MS.gene006547:intron 55.0%
!! GAATCCATGTCAGAGGCACC+CGG - chr4.4:32947670-32947689 MS.gene006547:CDS 55.0%
!! TACGGGTACAGTACCGGTAC+CGG - chr4.4:32949417-32949436 MS.gene006547:intron 55.0%
CCGGGTAGCATCAGCTGCTA+AGG + chr4.4:32950833-32950852 None:intergenic 60.0%
GGCTTCCAGCTTCTCCAAGG+TGG - chr4.4:32950310-32950329 MS.gene006547:intron 60.0%
GGTGGCTTCCAGCTTCTCCA+AGG - chr4.4:32950307-32950326 MS.gene006547:intron 60.0%
GTATGTGTGCAGGCCGGGTA+TGG - chr4.4:32950192-32950211 MS.gene006547:intron 60.0%
GTTACCGGGTGCCTCTGACA+TGG + chr4.4:32947677-32947696 None:intergenic 60.0%
GTTGCGTATGTGTGCAGGCC+GGG - chr4.4:32950187-32950206 MS.gene006547:intron 60.0%
!! ACGGGTACAGTACCGGTACC+GGG - chr4.4:32949418-32949437 MS.gene006547:intron 60.0%
GTGCAGGCCGGGTATGGACT+AGG - chr4.4:32950198-32950217 MS.gene006547:intron 65.0%


Chromosome Type Strat End Strand Name
chr4.4 gene 32947274 32952168 32947274 ID=MS.gene006547
chr4.4 mRNA 32947274 32952168 32947274 ID=MS.gene006547.t1;Parent=MS.gene006547
chr4.4 exon 32952028 32952168 32952028 ID=MS.gene006547.t1.exon1;Parent=MS.gene006547.t1
chr4.4 CDS 32952028 32952168 32952028 ID=cds.MS.gene006547.t1;Parent=MS.gene006547.t1
chr4.4 exon 32950777 32950836 32950777 ID=MS.gene006547.t1.exon2;Parent=MS.gene006547.t1
chr4.4 CDS 32950777 32950836 32950777 ID=cds.MS.gene006547.t1;Parent=MS.gene006547.t1
chr4.4 exon 32950567 32950633 32950567 ID=MS.gene006547.t1.exon3;Parent=MS.gene006547.t1
chr4.4 CDS 32950567 32950633 32950567 ID=cds.MS.gene006547.t1;Parent=MS.gene006547.t1
chr4.4 exon 32950360 32950484 32950360 ID=MS.gene006547.t1.exon4;Parent=MS.gene006547.t1
chr4.4 CDS 32950360 32950484 32950360 ID=cds.MS.gene006547.t1;Parent=MS.gene006547.t1
chr4.4 exon 32949439 32949540 32949439 ID=MS.gene006547.t1.exon5;Parent=MS.gene006547.t1
chr4.4 CDS 32949439 32949540 32949439 ID=cds.MS.gene006547.t1;Parent=MS.gene006547.t1
chr4.4 exon 32948870 32949238 32948870 ID=MS.gene006547.t1.exon6;Parent=MS.gene006547.t1
chr4.4 CDS 32948870 32949238 32948870 ID=cds.MS.gene006547.t1;Parent=MS.gene006547.t1
chr4.4 exon 32948732 32948779 32948732 ID=MS.gene006547.t1.exon7;Parent=MS.gene006547.t1
chr4.4 CDS 32948732 32948779 32948732 ID=cds.MS.gene006547.t1;Parent=MS.gene006547.t1
chr4.4 exon 32948563 32948625 32948563 ID=MS.gene006547.t1.exon8;Parent=MS.gene006547.t1
chr4.4 CDS 32948563 32948625 32948563 ID=cds.MS.gene006547.t1;Parent=MS.gene006547.t1
chr4.4 exon 32948200 32948280 32948200 ID=MS.gene006547.t1.exon9;Parent=MS.gene006547.t1
chr4.4 CDS 32948200 32948280 32948200 ID=cds.MS.gene006547.t1;Parent=MS.gene006547.t1
chr4.4 exon 32947932 32948030 32947932 ID=MS.gene006547.t1.exon10;Parent=MS.gene006547.t1
chr4.4 CDS 32947932 32948030 32947932 ID=cds.MS.gene006547.t1;Parent=MS.gene006547.t1
chr4.4 exon 32947636 32947773 32947636 ID=MS.gene006547.t1.exon11;Parent=MS.gene006547.t1
chr4.4 CDS 32947636 32947773 32947636 ID=cds.MS.gene006547.t1;Parent=MS.gene006547.t1
chr4.4 exon 32947274 32947401 32947274 ID=MS.gene006547.t1.exon12;Parent=MS.gene006547.t1
chr4.4 CDS 32947274 32947401 32947274 ID=cds.MS.gene006547.t1;Parent=MS.gene006547.t1
Gene Sequence

>MS.gene006547

ATGAAATATAAAATAGGAGCTCTGCTTGTAGACTTACCTAAAACATGTTTAAAAAATCTCAGATTTCTCTTCCCAGCTTTTGGTGGTCTACTATTTGGATATGATATTGGTGCCACATCTAGTGCAACAATTTCCATTCAGGTAAACCATTCTACTCTACTTTTGATACCGCTTCAATATTTTCATTTGGTGGTGTAGCACCTGTAATAATTTCCAGAACTTTAGAGATTCCGATTTTTCTGCTGTACTGTTGCTAGTTACATTTTAAATGCCAGAAGTATGATCTCATAGTATATTAGCTTTTCCATGCTTTATTTGTAAGGTGTTCCATATACTTCAATATAATATGACCATGATCATTACTTGTATTAATTCATGCATTGCATTGCATCACCTGAATCCATGTCAGAGGCACCCGGTAACGTAATTTCAGTCTTAACAGTTACATGATCTCTTTGTTGAGTTTTTACGGTGTCTATATTGGTAAGACACTTTTTCCCCCATTAGAAGTTGTGGGTAGATATCCAAGTGTAAAAGCAGTACAACAGGTCATCTTGGAACATATGATGGAGAAAAGGGATATGAATCCAGTTTTTGTTATGAATGATTTGTTGGGAAACACAACAAATTTCACTCTCTATGTAATTTCCAGTATCCTGTATATTCTTATTTGCCATCTCTTATTGGTGTCATTCTTGTTGCTCATTTTAGTCAACACAGAAATGGACATTTGTTCTGGTATTTCCCAACAAATAGTATATGAGCTTGGCCTAAGGAACCATAGCAATAAGTGATGGAACTTGGAAATGGAAATTTGAGAAATGAGAGTTGTGAATTTGTGATAGAGAGAATAACAAGAGTTTCTATTATTGATCAATCCAGAATTAAAGAGTTAACCTTTTCTCGAAGGTTTTTCCCTTTACGCCAGAACTTATTTATTTCTCAAAAATAATCGCCCTATGTACATTTTGTTGTATATCCTTTTCTCCTAACTAATCCCTCAAAACCCCTCCTAACTTCTTGTTGTCTCGTAGTGTGCATTCTCCATATTCTCTTCTCCCTCTCATTATTTCATCCACGACTTTACTAACAGTGTAGTCTTTTTCATTGCGTGATAGAACTGGCTAATGATTGCCTTGTGTTTATTGAAGTAAAATGTACAATGCATTCATATTAGTAGTATAATACATAGAAATGTGGATTTTTATGCTGAGGCCTTTTTGTGTCACTTTGACTGATTATAATGTAACACTAAGCAGTTTCTTTCAAAGCTGTTATTTTGTTGTATGTTTAGTGGTTTGCTCGTGTACTTATAATTTCCCTTATTTGCAGTCACCATCACTAAGTGGAATAACTTGGTATGACTTAGACGCTGTTGAAATTGGACTTCTTGTAAGTTTAAATTAAATTCTTGGTTTGTTCTTTACTTGGTCATATCGTCTTTTTGTCATTCTTATGAATCATTTGTTAATTGTTGCAATTGTATGTTGATCTTGAATATGAGTTCACACATTGATGCTTGATGTCTTTTGCAGACTAGCGGATCATTATATGGTGCCTTAATAGGCTCTGTGTTGGCCTTCAATATTGCTGATTTCTTAGGTAATTTTGCATTTTTATTAGTTATCATTTTAGATATAGTATCCTTCCCAGGTGAAGCTGACATGACAAATTGTATTTTAAGGGAGAAGAAGAGAGCTGCTTGTAGCTGCATTGATGTATCTTGTTGGAGCCCTCATAACAGCATTCGCTCCTAATTTTCCTTTATTGGTGATTGGGAGATTGGTATTTGGCATAGGAATTGGACTGGTATGCTCTTTTTTATGCTGGACTCTTAGTCTTATTGGAATAGGCAACAAACCATGAAATTATTATATGGAAACTGCTGCTGGGAGATCATCTGAGATATTTTATGTGCTCAAGATATAATAAATAATTAGTATAATATGAAATATTTTCTAGATATTCCAACAATTAAGAAGAAACGTTTATTGCTTCATGTGTAAAACAGCAGTTGTAGTATATTTTACAAGAAGAACATATAGTCCTTTGTATTTGTACTTACACATTCTCAACTGATTTTTATCAACGGTCTAGGCAATAATAATCATTCCACTGAAACTTTATATCTACGTTGCATGGATACGGGTACAGTACCGGTACCGGGTACGTACAATATATATTTTTGTTTTTGAAGAAGCAAAATAGGGTATGATATTTTTATAAAAACTTAGGTACGAGTACATATACAAAGAAATGTATTTCATAAGTATTAATTTTAACAAAAGAATATACAAGAGTATTTCATAATTTATTACACCCCAAATCAAAATAGACGTAGGAAATAATCAAGAAAAATAAGACAGAAAAAGGATATAAACGTAACAGGAGTCTGATACGGGTACAACATGAGTTTTGGAGAAGCCTTATGTCAACTCTAAGATTTAATGTGATATGACATGCGTGCTTGTAAGCTCCGTTAATGTTGCAATCGAGAATAGTTTCAACAATTTTTTTGGAAAAATGAGTTATTCTGCATGTATATGTATTGTTAGTTAATGAATATGTGTAGAGATAAGATTTAAATAATGTGTTGTATGTTTTATGTGTTCATTCCATCTCTTTTAGGCAATGCATGCTGCTCCAATGTACATTGCAGAGACAGCTCCAACGCCAATACGTGGACAACTAGTCTCTTTGAAAGAGTTCTTTATAGTAATCGGAATTGTTGTAAGTTCTCGAACTTTTCTGGTTGAACCTTGAATTTTCATGTCTGTTCTATAAATGCAGAAAAGCAATCAAATATTTAATTTTTCCTTCTACTCCTTCATGTAAAGCTTCTTCAATGATAATCTTCTATTATCAAATTACCTTCTGTTCTGAGCTTCCAGGTGTTACTAAAAATGGCCATATGTTGCGTATGTGTGCAGGCCGGGTATGGACTAGGTAGCTTGTTGGTAGACACTGTTGCTGGATGGCGGTATATGTTTGGAATTAGTAGTCCTGTTGCAGTAATAATGGGATTTGGAATGTGGTGGCTTCCAGCTTCTCCAAGGTGGATACTTTTACGTGCTATACAGAAAAAGGGGGATCTTCAGACTTTGAAAGACACTGCAATTCGTAGTTTGTGCCAGCTTCAAGGTCCTACATTTCATGATTCTGCTTCTCAGCAAGTAGATGAGATTATGGCAGAGTTTTCTTATTTAGGTGAAGAAAATGATGTTACCTTAGGGGAAATGTTTCGTGGAAAATGTCGGAAGGCCCTTGTGATAAGTGCAGGATTGGTCTTGTTTCAACAGGTATTGTAATTGCTCAAGTGAAATAGTGATAATTATAAGAGTTTCCAACACTTCAGTATATTTAATACTATAACATGCAAACTGTGACAGATCACGGGGCAACCAAGTGTTCTCTACTACGCCGCATCAATCCTACAGGTGTTATGTTAATTTTAATCAAGGAATAGTATAGCAAATTCGTGTTATCAATTACATATCACCATGGAATGTAATAACACTATTATTATCCAATTAAATTTGGTAGAGTGCAGGATTCTCCTTAGCAGCTGATGCTACCCGGGTCTCTATTCTCCTTGGTGTATTTAAGGTAGATTTCATTTTTATCATATTCTTAATAATTAACATGTGAATTCATGTTATAATATAGTTGTACTATCATAGTTTTGTCAGTTTCGTTAACATCACATGTATGTCAAGGTTTTCTATTATGTACAAAATTAGATTTCACTATGAAGGAATTCTTCAGGGGTAGATTTAGCTTGCCAAGTTATAAATTTAGCTTGCCTTGTTAATAACGCAGTAAGTTATTTAATTTTCCATCTACATGATGTGATCATATCAATGATATTTCCTTCTGTTTTTGTTGTAGTTGATTATGACTGGAGTGGCTGTTGTCGTTGTTGACAGACTTGGAAGGAGACCTTTACTACTTGGCGGAGTTTCAGGAATAGTAAGTTCCTTTCTATCTCCTTTCTATTTCCTGAGAAAGAAACATTTTTAGTTAGTTCTGTGTGCCGCTTCAACTTAGATAATTATATAAGAGGAATAAATGCGACATGAAAATTTCCAGTTGTCGATGAAGTTCAAATTATAAGAACATGTGGTTATTTGTGTGGCAGGTAATCTCATTATTCTTACTGGGTTCGTATTACATATTCTTGGATAATGCAGCAGTTCTTGCTGTAGTTGGTTTGCTGCTCTATGTTGGTTGTTATCAGGTGAAAAAGCTTTTTTTTTTCTTTTTCTTTTTCCATTCATGTCATGATTTATATTATCTGATATGTTGTTTTCACCTAGATATGGAATTTCATTTTCTCCACTTTTTATCATAATTCCTACATCCATGCTTACACCATTTAGTGATTTTATTTTTCAGATTTCCTTTGGTCCGATGGGTTGGCTTATGATAGCAGAGATTTTTCCCTTACGCTTGAGAGGCAAAGGACTTAGTATAGCAGTTCTCGTCAATTTTGCGGCAAATGCCCTGGTTACATTTGCCTTTTCCCCACTGAAGGTAACGAAATTGTGAAAAGGAAACCATATATTTTAAAAATCTATCATCTTCAATCACATGATATTTCACAAATATTTAATCTTACAACATCAAATATATTGGCAATATTTGTTCATTTGAATTGGTATTCAATTGAATGTATTGAACATCATTTTAAACTTGCTTTTCAGTGAATCCGTTGACTTCATTGAAATTGTTTGTCTGACTTTGATGTTTTTTCCCTCTACTTTACAGGATTTACTGGGAGCAGGAATTTTGTTTTACATATTTTCTGCAATAGCTGTGGCATCTCTTGTATTCATATACTTCATTGTACCAGAAACCAAGGGGCTTACACTAGAGGAAATTGAAGCAAAATGCCT
Protein sequence

>MS.gene006547.t1

MKYKIGALLVDLPKTCLKNLRFLFPAFGGLLFGYDIGATSSATISIQSPSLSGITWYDLDAVEIGLLTSGSLYGALIGSVLAFNIADFLGRRRELLVAALMYLVGALITAFAPNFPLLVIGRLVFGIGIGLAMHAAPMYIAETAPTPIRGQLVSLKEFFIVIGIVAGYGLGSLLVDTVAGWRYMFGISSPVAVIMGFGMWWLPASPRWILLRAIQKKGDLQTLKDTAIRSLCQLQGPTFHDSASQQVDEIMAEFSYLGEENDVTLGEMFRGKCRKALVISAGLVLFQQITGQPSVLYYAASILQSAGFSLAADATRVSILLGVFKLIMTGVAVVVVDRLGRRPLLLGGVSGIVISLFLLGSYYIFLDNAAVLAVVGLLLYVGCYQISFGPMGWLMIAEIFPLRLRGKGLSIAVLVNFAANALVTFAFSPLKDLLGAGILFYIFSAIAVASLVFIYFIVPETKGLTLEEIEAKC