Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062929.t1 | XP_003607077.1 | 97.5 | 520 | 13 | 0 | 1 | 520 | 1 | 520 | 2.30E-278 | 967.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062929.t1 | Q8VZ80 | 67.8 | 503 | 155 | 3 | 17 | 512 | 26 | 528 | 1.1e-188 | 661.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062929.t1 | G7JJX1 | 97.5 | 520 | 13 | 0 | 1 | 520 | 1 | 520 | 1.7e-278 | 967.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062929.t1 | MTR_4g072030 | 97.500 | 520 | 13 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1017 |
MS.gene062929.t1 | MTR_4g069500 | 75.862 | 522 | 119 | 3 | 1 | 515 | 1 | 522 | 0.0 | 795 |
MS.gene062929.t1 | MTR_3g116240 | 75.911 | 494 | 115 | 2 | 1 | 490 | 1 | 494 | 0.0 | 754 |
MS.gene062929.t1 | MTR_4g069500 | 76.059 | 472 | 109 | 2 | 48 | 515 | 1 | 472 | 0.0 | 721 |
MS.gene062929.t1 | MTR_8g077890 | 60.385 | 467 | 182 | 2 | 24 | 487 | 16 | 482 | 0.0 | 561 |
MS.gene062929.t1 | MTR_5g075300 | 56.458 | 480 | 206 | 2 | 22 | 498 | 14 | 493 | 0.0 | 558 |
MS.gene062929.t1 | MTR_6g088450 | 52.891 | 467 | 212 | 1 | 13 | 479 | 44 | 502 | 1.12e-177 | 510 |
MS.gene062929.t1 | MTR_4g069500 | 74.174 | 333 | 82 | 2 | 187 | 515 | 1 | 333 | 2.28e-174 | 494 |
MS.gene062929.t1 | MTR_2g013310 | 50.813 | 492 | 229 | 4 | 19 | 510 | 45 | 523 | 5.65e-166 | 480 |
MS.gene062929.t1 | MTR_7g446340 | 46.667 | 510 | 251 | 5 | 10 | 519 | 42 | 530 | 5.58e-159 | 463 |
MS.gene062929.t1 | MTR_6g007340 | 46.667 | 510 | 251 | 5 | 10 | 519 | 42 | 530 | 5.58e-159 | 463 |
MS.gene062929.t1 | MTR_5g019870 | 48.085 | 470 | 240 | 2 | 24 | 489 | 12 | 481 | 1.24e-157 | 458 |
MS.gene062929.t1 | MTR_8g103500 | 49.784 | 464 | 226 | 2 | 24 | 487 | 15 | 471 | 2.31e-157 | 457 |
MS.gene062929.t1 | MTR_2g013310 | 50.756 | 463 | 215 | 4 | 48 | 510 | 1 | 450 | 4.22e-154 | 447 |
MS.gene062929.t1 | MTR_1g116660 | 33.820 | 479 | 290 | 9 | 14 | 484 | 20 | 479 | 6.43e-76 | 248 |
MS.gene062929.t1 | MTR_7g005910 | 33.958 | 480 | 287 | 9 | 14 | 484 | 18 | 476 | 1.53e-74 | 244 |
MS.gene062929.t1 | MTR_1g116650 | 32.245 | 490 | 284 | 9 | 14 | 493 | 63 | 514 | 2.86e-73 | 242 |
MS.gene062929.t1 | MTR_3g084110 | 32.165 | 485 | 298 | 9 | 17 | 493 | 16 | 477 | 5.62e-72 | 238 |
MS.gene062929.t1 | MTR_4g077740 | 31.463 | 499 | 299 | 11 | 10 | 484 | 18 | 497 | 1.55e-66 | 223 |
MS.gene062929.t1 | MTR_7g082270 | 32.165 | 485 | 287 | 12 | 10 | 484 | 47 | 499 | 3.50e-64 | 217 |
MS.gene062929.t1 | MTR_6g018790 | 33.333 | 462 | 265 | 11 | 33 | 484 | 111 | 539 | 1.04e-62 | 214 |
MS.gene062929.t1 | MTR_3g074410 | 30.801 | 487 | 289 | 11 | 31 | 491 | 29 | 493 | 1.11e-62 | 213 |
MS.gene062929.t1 | MTR_5g077580 | 26.944 | 553 | 286 | 8 | 23 | 484 | 22 | 547 | 2.99e-58 | 203 |
MS.gene062929.t1 | MTR_2g049020 | 34.957 | 349 | 212 | 6 | 23 | 368 | 22 | 358 | 7.52e-58 | 202 |
MS.gene062929.t1 | MTR_0009s0370 | 30.492 | 528 | 312 | 14 | 16 | 513 | 9 | 511 | 1.48e-57 | 200 |
MS.gene062929.t1 | MTR_5g006070 | 29.079 | 478 | 294 | 8 | 31 | 483 | 26 | 483 | 1.83e-56 | 197 |
MS.gene062929.t1 | MTR_8g102860 | 30.346 | 491 | 294 | 12 | 26 | 491 | 26 | 493 | 8.04e-55 | 192 |
MS.gene062929.t1 | MTR_7g082270 | 32.629 | 426 | 245 | 12 | 10 | 425 | 47 | 440 | 9.89e-55 | 191 |
MS.gene062929.t1 | MTR_5g006070 | 30.713 | 407 | 258 | 6 | 81 | 483 | 49 | 435 | 1.10e-54 | 191 |
MS.gene062929.t1 | MTR_1g104770 | 28.016 | 489 | 308 | 9 | 31 | 493 | 27 | 497 | 3.73e-54 | 190 |
MS.gene062929.t1 | MTR_8g102860 | 31.250 | 416 | 259 | 7 | 81 | 491 | 48 | 441 | 1.89e-53 | 187 |
MS.gene062929.t1 | MTR_3g074390 | 28.719 | 484 | 303 | 10 | 31 | 491 | 32 | 496 | 2.92e-52 | 186 |
MS.gene062929.t1 | MTR_3g074270 | 29.876 | 482 | 279 | 10 | 31 | 491 | 27 | 470 | 4.08e-52 | 184 |
MS.gene062929.t1 | MTR_2g048720 | 33.333 | 354 | 212 | 5 | 23 | 370 | 22 | 357 | 4.52e-52 | 186 |
MS.gene062929.t1 | MTR_1g038600 | 30.508 | 472 | 292 | 11 | 31 | 491 | 27 | 473 | 1.10e-51 | 183 |
MS.gene062929.t1 | MTR_8g077310 | 27.332 | 461 | 307 | 6 | 30 | 487 | 50 | 485 | 1.27e-51 | 183 |
MS.gene062929.t1 | MTR_0204s0020 | 28.247 | 485 | 304 | 10 | 29 | 493 | 24 | 484 | 1.71e-51 | 183 |
MS.gene062929.t1 | MTR_5g020270 | 28.633 | 461 | 301 | 8 | 30 | 487 | 53 | 488 | 3.62e-51 | 182 |
MS.gene062929.t1 | MTR_1g104750 | 27.368 | 475 | 305 | 8 | 31 | 483 | 27 | 483 | 4.26e-51 | 182 |
MS.gene062929.t1 | MTR_0204s0020 | 28.216 | 482 | 305 | 10 | 29 | 493 | 24 | 481 | 9.17e-51 | 181 |
MS.gene062929.t1 | MTR_1g038630 | 29.243 | 489 | 294 | 11 | 31 | 491 | 27 | 491 | 1.30e-50 | 181 |
MS.gene062929.t1 | MTR_2g026160 | 30.691 | 391 | 257 | 5 | 1 | 387 | 1 | 381 | 1.46e-50 | 182 |
MS.gene062929.t1 | MTR_2g026160 | 40.659 | 91 | 54 | 0 | 394 | 484 | 463 | 553 | 5.62e-14 | 75.1 |
MS.gene062929.t1 | MTR_6g087040 | 27.902 | 491 | 304 | 13 | 26 | 491 | 28 | 493 | 2.66e-50 | 180 |
MS.gene062929.t1 | MTR_6g088375 | 27.902 | 491 | 304 | 13 | 26 | 491 | 28 | 493 | 2.66e-50 | 180 |
MS.gene062929.t1 | MTR_3g023480 | 30.788 | 419 | 264 | 7 | 79 | 493 | 94 | 490 | 4.11e-50 | 179 |
MS.gene062929.t1 | MTR_8g077300 | 27.742 | 465 | 300 | 9 | 30 | 487 | 42 | 477 | 6.48e-50 | 178 |
MS.gene062929.t1 | MTR_1g104780 | 28.361 | 476 | 296 | 8 | 33 | 483 | 28 | 483 | 4.37e-49 | 177 |
MS.gene062929.t1 | MTR_7g113970 | 26.747 | 501 | 327 | 7 | 2 | 489 | 24 | 497 | 5.57e-49 | 176 |
MS.gene062929.t1 | MTR_0204s0040 | 28.512 | 477 | 297 | 11 | 29 | 483 | 32 | 486 | 5.71e-49 | 176 |
MS.gene062929.t1 | MTR_1g022315 | 27.197 | 478 | 318 | 8 | 15 | 487 | 36 | 488 | 7.50e-49 | 176 |
MS.gene062929.t1 | MTR_5g094760 | 26.706 | 513 | 333 | 9 | 1 | 493 | 1 | 490 | 1.01e-48 | 176 |
MS.gene062929.t1 | MTR_3g008160 | 26.186 | 485 | 314 | 10 | 31 | 493 | 27 | 489 | 1.05e-48 | 176 |
MS.gene062929.t1 | MTR_5g020270 | 30.097 | 412 | 260 | 8 | 79 | 487 | 2 | 388 | 2.82e-48 | 172 |
MS.gene062929.t1 | MTR_3g008170 | 28.056 | 499 | 315 | 13 | 18 | 491 | 13 | 492 | 2.90e-48 | 174 |
MS.gene062929.t1 | MTR_4g116770 | 28.512 | 477 | 297 | 11 | 29 | 483 | 228 | 682 | 4.17e-48 | 177 |
MS.gene062929.t1 | MTR_2g020710 | 28.352 | 455 | 284 | 8 | 38 | 484 | 60 | 480 | 6.88e-48 | 173 |
MS.gene062929.t1 | MTR_3g008160 | 27.098 | 417 | 280 | 6 | 79 | 493 | 46 | 440 | 1.08e-47 | 172 |
MS.gene062929.t1 | MTR_4g118610 | 28.509 | 456 | 292 | 8 | 38 | 489 | 63 | 488 | 1.62e-47 | 172 |
MS.gene062929.t1 | MTR_4g090600 | 28.367 | 490 | 295 | 12 | 26 | 484 | 22 | 486 | 2.13e-47 | 172 |
MS.gene062929.t1 | MTR_5g082540 | 29.423 | 503 | 305 | 13 | 16 | 491 | 12 | 491 | 3.04e-47 | 172 |
MS.gene062929.t1 | MTR_4g091370 | 27.049 | 488 | 304 | 10 | 26 | 484 | 22 | 486 | 3.64e-47 | 172 |
MS.gene062929.t1 | MTR_8g077310 | 27.913 | 412 | 269 | 6 | 79 | 487 | 2 | 388 | 4.44e-47 | 168 |
MS.gene062929.t1 | MTR_7g091690 | 27.290 | 513 | 330 | 10 | 1 | 493 | 1 | 490 | 5.14e-47 | 171 |
MS.gene062929.t1 | MTR_4g116790 | 28.866 | 485 | 301 | 10 | 29 | 493 | 30 | 490 | 6.76e-47 | 171 |
MS.gene062929.t1 | MTR_5g041550 | 27.112 | 509 | 307 | 13 | 17 | 493 | 16 | 492 | 9.24e-47 | 171 |
MS.gene062929.t1 | MTR_3g080240 | 29.274 | 468 | 289 | 12 | 32 | 489 | 98 | 533 | 9.58e-47 | 171 |
MS.gene062929.t1 | MTR_2g020710 | 29.216 | 421 | 256 | 8 | 72 | 484 | 5 | 391 | 2.12e-46 | 167 |
MS.gene062929.t1 | MTR_1g022315 | 28.571 | 413 | 266 | 7 | 79 | 487 | 2 | 389 | 2.17e-45 | 164 |
MS.gene062929.t1 | MTR_6g087910 | 29.675 | 492 | 307 | 13 | 1 | 484 | 23 | 483 | 1.04e-44 | 164 |
MS.gene062929.t1 | MTR_3g093060 | 29.000 | 400 | 256 | 8 | 92 | 484 | 61 | 439 | 2.73e-44 | 162 |
MS.gene062929.t1 | MTR_7g094450 | 28.070 | 456 | 281 | 11 | 43 | 486 | 52 | 472 | 3.14e-44 | 163 |
MS.gene062929.t1 | MTR_3g007910 | 26.733 | 505 | 306 | 10 | 17 | 502 | 15 | 474 | 7.56e-44 | 162 |
MS.gene062929.t1 | MTR_3g093010 | 25.657 | 495 | 313 | 10 | 31 | 493 | 26 | 497 | 2.18e-43 | 161 |
MS.gene062929.t1 | MTR_7g113960 | 26.058 | 449 | 303 | 6 | 38 | 486 | 38 | 457 | 5.08e-43 | 159 |
MS.gene062929.t1 | MTR_4g013205 | 29.412 | 459 | 288 | 8 | 32 | 484 | 41 | 469 | 4.22e-42 | 157 |
MS.gene062929.t1 | MTR_5g020270 | 27.039 | 466 | 281 | 9 | 30 | 487 | 53 | 467 | 4.48e-42 | 157 |
MS.gene062929.t1 | MTR_2g026140 | 30.352 | 369 | 225 | 7 | 33 | 397 | 30 | 370 | 9.93e-42 | 157 |
MS.gene062929.t1 | MTR_7g094110 | 29.167 | 432 | 279 | 9 | 55 | 486 | 70 | 474 | 2.36e-40 | 152 |
MS.gene062929.t1 | MTR_3g074380 | 29.345 | 351 | 208 | 8 | 31 | 361 | 30 | 360 | 2.95e-39 | 147 |
MS.gene062929.t1 | MTR_3g074320 | 30.341 | 323 | 202 | 6 | 173 | 491 | 21 | 324 | 3.78e-37 | 140 |
MS.gene062929.t1 | MTR_3g074340 | 30.462 | 325 | 199 | 7 | 173 | 491 | 21 | 324 | 3.90e-37 | 140 |
MS.gene062929.t1 | MTR_3g074370 | 30.462 | 325 | 199 | 7 | 173 | 491 | 21 | 324 | 4.68e-37 | 140 |
MS.gene062929.t1 | MTR_8g077310 | 27.273 | 341 | 224 | 4 | 30 | 370 | 50 | 366 | 3.47e-36 | 139 |
MS.gene062929.t1 | MTR_4g064820 | 30.163 | 368 | 220 | 11 | 23 | 367 | 88 | 441 | 3.90e-36 | 140 |
MS.gene062929.t1 | MTR_3g116060 | 36.019 | 211 | 133 | 2 | 25 | 234 | 2 | 211 | 1.55e-35 | 141 |
MS.gene062929.t1 | MTR_3g116060 | 30.279 | 251 | 157 | 7 | 261 | 501 | 488 | 730 | 1.36e-23 | 105 |
MS.gene062929.t1 | MTR_2g020710 | 27.344 | 384 | 238 | 7 | 38 | 413 | 60 | 410 | 1.81e-35 | 137 |
MS.gene062929.t1 | MTR_2g020710 | 27.320 | 388 | 241 | 7 | 33 | 412 | 55 | 409 | 3.31e-35 | 137 |
MS.gene062929.t1 | MTR_4g118610 | 27.532 | 385 | 246 | 7 | 33 | 413 | 58 | 413 | 6.99e-33 | 130 |
MS.gene062929.t1 | MTR_7g094110 | 27.778 | 432 | 265 | 10 | 55 | 486 | 70 | 454 | 2.60e-31 | 126 |
MS.gene062929.t1 | MTR_3g118530 | 38.647 | 207 | 113 | 6 | 38 | 236 | 15 | 215 | 2.66e-31 | 129 |
MS.gene062929.t1 | MTR_3g118530 | 30.973 | 226 | 136 | 5 | 269 | 483 | 507 | 723 | 7.93e-25 | 108 |
MS.gene062929.t1 | MTR_3g118530 | 38.647 | 207 | 113 | 6 | 38 | 236 | 15 | 215 | 4.94e-31 | 127 |
MS.gene062929.t1 | MTR_5g024740 | 35.784 | 204 | 123 | 5 | 31 | 229 | 8 | 208 | 1.03e-30 | 127 |
MS.gene062929.t1 | MTR_5g024740 | 30.672 | 238 | 148 | 5 | 256 | 483 | 475 | 705 | 1.95e-19 | 92.4 |
MS.gene062929.t1 | MTR_7g113970 | 25.948 | 343 | 229 | 4 | 32 | 374 | 67 | 384 | 3.13e-30 | 122 |
MS.gene062929.t1 | MTR_4g116790 | 25.217 | 345 | 220 | 6 | 29 | 354 | 30 | 355 | 3.45e-29 | 119 |
MS.gene062929.t1 | MTR_8g073100 | 35.294 | 204 | 124 | 5 | 31 | 229 | 8 | 208 | 2.97e-28 | 119 |
MS.gene062929.t1 | MTR_8g073100 | 28.634 | 227 | 146 | 3 | 266 | 483 | 482 | 701 | 2.29e-20 | 95.1 |
MS.gene062929.t1 | MTR_5g044910 | 31.683 | 202 | 134 | 4 | 31 | 229 | 8 | 208 | 1.64e-26 | 114 |
MS.gene062929.t1 | MTR_5g044910 | 30.932 | 236 | 146 | 4 | 258 | 483 | 475 | 703 | 1.09e-19 | 93.2 |
MS.gene062929.t1 | MTR_2g020710 | 26.347 | 334 | 206 | 6 | 33 | 358 | 55 | 356 | 3.56e-26 | 110 |
MS.gene062929.t1 | MTR_7g113960 | 24.036 | 337 | 231 | 4 | 38 | 374 | 38 | 349 | 5.86e-25 | 107 |
MS.gene062929.t1 | MTR_3g074400 | 25.926 | 378 | 232 | 9 | 79 | 455 | 45 | 375 | 1.88e-23 | 103 |
MS.gene062929.t1 | MTR_1g069935 | 23.355 | 471 | 257 | 17 | 80 | 486 | 84 | 514 | 1.23e-13 | 73.6 |
MS.gene062929.t1 | MTR_4g064807 | 42.667 | 75 | 43 | 0 | 411 | 485 | 3 | 77 | 4.20e-13 | 65.1 |
MS.gene062929.t1 | MTR_1g074940 | 24.670 | 454 | 253 | 19 | 80 | 480 | 83 | 500 | 5.16e-13 | 71.6 |
MS.gene062929.t1 | MTR_4g081490 | 24.079 | 407 | 268 | 16 | 80 | 482 | 66 | 435 | 1.37e-12 | 70.1 |
MS.gene062929.t1 | MTR_4g083960 | 21.861 | 462 | 273 | 15 | 77 | 484 | 78 | 505 | 6.55e-12 | 68.2 |
MS.gene062929.t1 | MTR_4g005090 | 23.488 | 430 | 281 | 12 | 79 | 482 | 81 | 488 | 1.46e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene062929.t1 | AT3G18830 | 67.191 | 509 | 160 | 3 | 13 | 514 | 22 | 530 | 0.0 | 700 |
MS.gene062929.t1 | AT2G16130 | 64.609 | 486 | 169 | 2 | 20 | 502 | 19 | 504 | 0.0 | 640 |
MS.gene062929.t1 | AT2G16120 | 63.711 | 485 | 173 | 2 | 20 | 501 | 19 | 503 | 0.0 | 631 |
MS.gene062929.t1 | AT4G36670 | 57.839 | 472 | 197 | 1 | 18 | 487 | 8 | 479 | 0.0 | 563 |
MS.gene062929.t1 | AT2G18480 | 58.613 | 476 | 190 | 3 | 16 | 487 | 11 | 483 | 0.0 | 537 |
MS.gene062929.t1 | AT2G20780 | 49.160 | 476 | 226 | 4 | 19 | 493 | 47 | 507 | 1.39e-157 | 459 |
MS.gene062929.t1 | AT2G20780 | 47.609 | 460 | 215 | 5 | 56 | 514 | 26 | 460 | 2.40e-142 | 418 |
MS.gene062929.t1 | AT2G43330 | 32.470 | 502 | 312 | 8 | 14 | 503 | 16 | 502 | 7.96e-70 | 232 |
MS.gene062929.t1 | AT5G16150 | 32.675 | 456 | 276 | 8 | 33 | 484 | 111 | 539 | 5.22e-62 | 213 |
MS.gene062929.t1 | AT5G16150 | 32.675 | 456 | 276 | 8 | 33 | 484 | 111 | 539 | 5.22e-62 | 213 |
MS.gene062929.t1 | AT5G16150 | 32.675 | 456 | 276 | 8 | 33 | 484 | 111 | 539 | 5.22e-62 | 213 |
MS.gene062929.t1 | AT5G59250 | 29.645 | 479 | 283 | 11 | 32 | 484 | 103 | 553 | 1.10e-58 | 204 |
MS.gene062929.t1 | AT5G17010 | 30.409 | 513 | 286 | 16 | 10 | 484 | 20 | 499 | 1.18e-58 | 202 |
MS.gene062929.t1 | AT5G17010 | 30.409 | 513 | 286 | 16 | 10 | 484 | 20 | 499 | 1.18e-58 | 202 |
MS.gene062929.t1 | AT5G17010 | 30.409 | 513 | 286 | 16 | 10 | 484 | 20 | 499 | 1.18e-58 | 202 |
MS.gene062929.t1 | AT1G50310 | 29.209 | 493 | 300 | 12 | 26 | 493 | 24 | 492 | 2.17e-58 | 202 |
MS.gene062929.t1 | AT3G03090 | 30.983 | 468 | 288 | 9 | 32 | 484 | 52 | 499 | 4.87e-57 | 198 |
MS.gene062929.t1 | AT5G26340 | 29.363 | 487 | 298 | 11 | 31 | 493 | 27 | 491 | 6.75e-57 | 198 |
MS.gene062929.t1 | AT3G19940 | 29.697 | 495 | 294 | 13 | 26 | 493 | 24 | 491 | 1.39e-55 | 194 |
MS.gene062929.t1 | AT5G26250 | 28.776 | 490 | 301 | 10 | 30 | 493 | 25 | 492 | 5.57e-54 | 190 |
MS.gene062929.t1 | AT3G05960 | 29.124 | 491 | 307 | 9 | 17 | 486 | 11 | 481 | 1.41e-53 | 189 |
MS.gene062929.t1 | AT3G05150 | 28.513 | 491 | 303 | 9 | 17 | 495 | 21 | 475 | 4.18e-53 | 187 |
MS.gene062929.t1 | AT3G05150 | 28.542 | 480 | 297 | 8 | 17 | 484 | 21 | 466 | 7.99e-53 | 186 |
MS.gene062929.t1 | AT3G05150 | 28.542 | 480 | 297 | 8 | 17 | 484 | 21 | 466 | 7.99e-53 | 186 |
MS.gene062929.t1 | AT5G27360 | 27.733 | 494 | 318 | 11 | 10 | 495 | 11 | 473 | 1.27e-52 | 186 |
MS.gene062929.t1 | AT1G54730 | 29.801 | 453 | 287 | 7 | 38 | 488 | 43 | 466 | 2.00e-52 | 185 |
MS.gene062929.t1 | AT5G27350 | 28.340 | 494 | 313 | 11 | 1 | 486 | 3 | 463 | 2.02e-52 | 185 |
MS.gene062929.t1 | AT5G27360 | 27.586 | 493 | 318 | 11 | 10 | 494 | 59 | 520 | 3.18e-52 | 186 |
MS.gene062929.t1 | AT1G30220 | 33.913 | 345 | 211 | 4 | 23 | 363 | 24 | 355 | 4.55e-52 | 186 |
MS.gene062929.t1 | AT1G30220 | 38.462 | 91 | 56 | 0 | 394 | 484 | 463 | 553 | 1.15e-12 | 70.9 |
MS.gene062929.t1 | AT1G11260 | 27.621 | 496 | 311 | 11 | 22 | 492 | 18 | 490 | 4.82e-52 | 185 |
MS.gene062929.t1 | AT1G75220 | 28.788 | 462 | 301 | 7 | 29 | 487 | 50 | 486 | 6.70e-52 | 184 |
MS.gene062929.t1 | AT1G34580 | 28.893 | 488 | 300 | 11 | 31 | 491 | 28 | 495 | 1.04e-51 | 184 |
MS.gene062929.t1 | AT1G34580 | 30.238 | 420 | 267 | 8 | 79 | 491 | 45 | 445 | 1.67e-51 | 182 |
MS.gene062929.t1 | AT3G19930 | 27.969 | 522 | 314 | 14 | 1 | 491 | 1 | 491 | 2.56e-51 | 183 |
MS.gene062929.t1 | AT3G19930 | 27.969 | 522 | 314 | 14 | 1 | 491 | 1 | 491 | 2.56e-51 | 183 |
MS.gene062929.t1 | AT5G23270 | 29.109 | 505 | 310 | 13 | 16 | 495 | 13 | 494 | 4.78e-51 | 182 |
MS.gene062929.t1 | AT5G18840 | 27.642 | 492 | 311 | 9 | 8 | 484 | 14 | 475 | 5.62e-51 | 181 |
MS.gene062929.t1 | AT4G02050 | 27.778 | 504 | 323 | 10 | 18 | 499 | 18 | 502 | 4.75e-50 | 179 |
MS.gene062929.t1 | AT4G02050 | 27.778 | 504 | 323 | 10 | 18 | 499 | 18 | 502 | 4.75e-50 | 179 |
MS.gene062929.t1 | AT1G19450 | 28.017 | 464 | 302 | 7 | 29 | 487 | 51 | 487 | 2.13e-49 | 177 |
MS.gene062929.t1 | AT1G05030 | 30.065 | 459 | 285 | 8 | 33 | 484 | 85 | 514 | 4.12e-48 | 174 |
MS.gene062929.t1 | AT3G05165 | 27.536 | 483 | 316 | 12 | 10 | 486 | 8 | 462 | 8.17e-48 | 172 |
MS.gene062929.t1 | AT3G05165 | 27.536 | 483 | 316 | 12 | 10 | 486 | 8 | 462 | 8.17e-48 | 172 |
MS.gene062929.t1 | AT3G05165 | 27.536 | 483 | 316 | 12 | 10 | 486 | 8 | 462 | 8.17e-48 | 172 |
MS.gene062929.t1 | AT4G04750 | 27.231 | 437 | 289 | 8 | 55 | 489 | 64 | 473 | 1.16e-47 | 172 |
MS.gene062929.t1 | AT4G04750 | 27.231 | 437 | 289 | 8 | 55 | 489 | 64 | 473 | 1.16e-47 | 172 |
MS.gene062929.t1 | AT4G04750 | 27.231 | 437 | 289 | 8 | 55 | 489 | 108 | 517 | 2.13e-47 | 172 |
MS.gene062929.t1 | AT1G77210 | 27.495 | 491 | 306 | 13 | 26 | 493 | 28 | 491 | 3.48e-47 | 171 |
MS.gene062929.t1 | AT1G77210 | 27.495 | 491 | 306 | 13 | 26 | 493 | 28 | 491 | 3.48e-47 | 171 |
MS.gene062929.t1 | AT3G05160 | 27.061 | 473 | 314 | 8 | 18 | 486 | 8 | 453 | 4.39e-47 | 170 |
MS.gene062929.t1 | AT4G04760 | 27.957 | 465 | 297 | 9 | 32 | 489 | 36 | 469 | 5.99e-47 | 170 |
MS.gene062929.t1 | AT1G08930 | 26.667 | 480 | 314 | 11 | 19 | 489 | 43 | 493 | 2.67e-46 | 169 |
MS.gene062929.t1 | AT1G08930 | 26.667 | 480 | 314 | 11 | 19 | 489 | 43 | 493 | 2.67e-46 | 169 |
MS.gene062929.t1 | AT2G48020 | 27.564 | 468 | 308 | 8 | 19 | 484 | 20 | 458 | 3.78e-46 | 168 |
MS.gene062929.t1 | AT2G48020 | 27.564 | 468 | 308 | 8 | 19 | 484 | 20 | 458 | 3.78e-46 | 168 |
MS.gene062929.t1 | AT4G04760 | 28.182 | 440 | 278 | 9 | 57 | 489 | 2 | 410 | 5.49e-46 | 166 |
MS.gene062929.t1 | AT1G50310 | 31.593 | 364 | 220 | 10 | 135 | 493 | 10 | 349 | 1.97e-45 | 164 |
MS.gene062929.t1 | AT2G35740 | 31.487 | 343 | 217 | 6 | 31 | 367 | 30 | 360 | 2.06e-45 | 168 |
MS.gene062929.t1 | AT2G35740 | 40.659 | 91 | 54 | 0 | 394 | 484 | 466 | 556 | 1.76e-13 | 73.6 |
MS.gene062929.t1 | AT1G07340 | 28.926 | 484 | 286 | 12 | 30 | 483 | 26 | 481 | 8.47e-45 | 165 |
MS.gene062929.t1 | AT4G21480 | 27.539 | 512 | 312 | 15 | 16 | 495 | 11 | 495 | 9.06e-45 | 165 |
MS.gene062929.t1 | AT1G08890 | 27.292 | 480 | 313 | 10 | 18 | 490 | 13 | 463 | 1.29e-44 | 164 |
MS.gene062929.t1 | AT1G54730 | 27.938 | 451 | 277 | 8 | 38 | 488 | 43 | 445 | 1.88e-44 | 163 |
MS.gene062929.t1 | AT4G16480 | 30.792 | 341 | 222 | 6 | 31 | 367 | 31 | 361 | 7.58e-44 | 164 |
MS.gene062929.t1 | AT4G16480 | 40.659 | 91 | 54 | 0 | 394 | 484 | 467 | 557 | 1.98e-14 | 76.3 |
MS.gene062929.t1 | AT4G16480 | 30.792 | 341 | 222 | 6 | 31 | 367 | 31 | 361 | 7.58e-44 | 164 |
MS.gene062929.t1 | AT4G16480 | 40.659 | 91 | 54 | 0 | 394 | 484 | 467 | 557 | 1.98e-14 | 76.3 |
MS.gene062929.t1 | AT4G16480 | 30.792 | 341 | 222 | 6 | 31 | 367 | 31 | 361 | 7.58e-44 | 164 |
MS.gene062929.t1 | AT4G16480 | 40.659 | 91 | 54 | 0 | 394 | 484 | 467 | 557 | 1.98e-14 | 76.3 |
MS.gene062929.t1 | AT1G54730 | 28.818 | 406 | 259 | 6 | 38 | 441 | 43 | 420 | 8.04e-44 | 160 |
MS.gene062929.t1 | AT3G05160 | 27.674 | 430 | 284 | 7 | 57 | 486 | 2 | 404 | 5.00e-43 | 158 |
MS.gene062929.t1 | AT3G05160 | 27.674 | 430 | 284 | 7 | 57 | 486 | 2 | 404 | 5.00e-43 | 158 |
MS.gene062929.t1 | AT3G05155 | 25.207 | 484 | 330 | 10 | 3 | 484 | 2 | 455 | 1.13e-42 | 158 |
MS.gene062929.t1 | AT1G67300 | 29.348 | 460 | 290 | 11 | 32 | 484 | 56 | 487 | 1.15e-42 | 159 |
MS.gene062929.t1 | AT1G05030 | 29.111 | 450 | 283 | 8 | 47 | 489 | 47 | 467 | 1.16e-42 | 158 |
MS.gene062929.t1 | AT1G79820 | 29.718 | 461 | 284 | 12 | 32 | 484 | 59 | 487 | 1.26e-42 | 159 |
MS.gene062929.t1 | AT1G79820 | 29.718 | 461 | 284 | 12 | 32 | 484 | 59 | 487 | 1.26e-42 | 159 |
MS.gene062929.t1 | AT1G08900 | 28.054 | 442 | 289 | 9 | 50 | 490 | 40 | 453 | 8.99e-42 | 155 |
MS.gene062929.t1 | AT3G05400 | 27.473 | 455 | 299 | 9 | 38 | 490 | 37 | 462 | 2.45e-41 | 154 |
MS.gene062929.t1 | AT1G08900 | 27.753 | 454 | 299 | 9 | 38 | 490 | 36 | 461 | 3.38e-41 | 154 |
MS.gene062929.t1 | AT1G08900 | 27.753 | 454 | 299 | 9 | 38 | 490 | 36 | 461 | 3.38e-41 | 154 |
MS.gene062929.t1 | AT5G61520 | 27.579 | 504 | 304 | 17 | 22 | 493 | 19 | 493 | 3.85e-41 | 155 |
MS.gene062929.t1 | AT1G08900 | 27.991 | 443 | 290 | 9 | 49 | 490 | 5 | 419 | 4.63e-41 | 153 |
MS.gene062929.t1 | AT1G67300 | 29.067 | 461 | 289 | 12 | 32 | 484 | 56 | 486 | 2.50e-40 | 152 |
MS.gene062929.t1 | AT1G67300 | 29.067 | 461 | 289 | 12 | 32 | 484 | 56 | 486 | 2.50e-40 | 152 |
MS.gene062929.t1 | AT5G27360 | 27.387 | 398 | 257 | 9 | 99 | 495 | 3 | 369 | 6.73e-40 | 149 |
MS.gene062929.t1 | AT5G27360 | 27.387 | 398 | 257 | 9 | 99 | 495 | 3 | 369 | 6.73e-40 | 149 |
MS.gene062929.t1 | AT4G04760 | 26.882 | 465 | 299 | 10 | 32 | 489 | 36 | 466 | 1.38e-39 | 150 |
MS.gene062929.t1 | AT5G61520 | 27.446 | 419 | 274 | 11 | 79 | 493 | 53 | 445 | 9.96e-39 | 147 |
MS.gene062929.t1 | AT5G27360 | 25.952 | 420 | 276 | 9 | 10 | 421 | 11 | 403 | 6.09e-38 | 144 |
MS.gene062929.t1 | AT3G05165 | 27.700 | 426 | 272 | 12 | 10 | 429 | 8 | 403 | 6.16e-38 | 145 |
MS.gene062929.t1 | AT3G05165 | 27.700 | 426 | 272 | 12 | 10 | 429 | 8 | 403 | 6.16e-38 | 145 |
MS.gene062929.t1 | AT3G05165 | 26.712 | 438 | 288 | 10 | 10 | 441 | 8 | 418 | 1.01e-37 | 145 |
MS.gene062929.t1 | AT1G54730 | 27.778 | 378 | 243 | 6 | 38 | 413 | 43 | 392 | 1.77e-37 | 143 |
MS.gene062929.t1 | AT1G54730 | 27.778 | 378 | 243 | 6 | 38 | 413 | 43 | 392 | 1.77e-37 | 143 |
MS.gene062929.t1 | AT1G67300 | 28.306 | 431 | 269 | 13 | 13 | 433 | 35 | 435 | 6.34e-37 | 142 |
MS.gene062929.t1 | AT1G67300 | 28.306 | 431 | 269 | 13 | 13 | 433 | 35 | 435 | 6.34e-37 | 142 |
MS.gene062929.t1 | AT1G79820 | 29.484 | 407 | 253 | 10 | 32 | 433 | 59 | 436 | 9.82e-37 | 142 |
MS.gene062929.t1 | AT3G05400 | 29.144 | 374 | 234 | 9 | 119 | 490 | 98 | 442 | 1.74e-36 | 140 |
MS.gene062929.t1 | AT1G67300 | 29.177 | 401 | 246 | 12 | 32 | 424 | 56 | 426 | 3.39e-36 | 140 |
MS.gene062929.t1 | AT1G67300 | 29.177 | 401 | 246 | 12 | 32 | 424 | 56 | 426 | 3.39e-36 | 140 |
MS.gene062929.t1 | AT1G54730 | 26.733 | 404 | 249 | 7 | 38 | 441 | 43 | 399 | 4.78e-36 | 139 |
MS.gene062929.t1 | AT1G20840 | 38.426 | 216 | 121 | 5 | 25 | 234 | 2 | 211 | 4.97e-36 | 143 |
MS.gene062929.t1 | AT1G20840 | 29.502 | 261 | 158 | 6 | 257 | 503 | 486 | 734 | 7.82e-19 | 90.5 |
MS.gene062929.t1 | AT1G20840 | 38.426 | 216 | 121 | 5 | 25 | 234 | 2 | 211 | 4.97e-36 | 143 |
MS.gene062929.t1 | AT1G20840 | 29.502 | 261 | 158 | 6 | 257 | 503 | 486 | 734 | 7.82e-19 | 90.5 |
MS.gene062929.t1 | AT3G51490 | 36.404 | 228 | 134 | 6 | 31 | 252 | 8 | 230 | 1.08e-35 | 142 |
MS.gene062929.t1 | AT3G51490 | 30.802 | 237 | 146 | 5 | 269 | 499 | 500 | 724 | 1.32e-20 | 96.3 |
MS.gene062929.t1 | AT3G51490 | 36.404 | 228 | 134 | 6 | 31 | 252 | 8 | 230 | 1.15e-35 | 142 |
MS.gene062929.t1 | AT3G51490 | 31.535 | 241 | 147 | 4 | 269 | 499 | 500 | 732 | 2.02e-24 | 107 |
MS.gene062929.t1 | AT5G17010 | 25.904 | 498 | 268 | 14 | 10 | 484 | 17 | 436 | 1.63e-35 | 138 |
MS.gene062929.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 1.02e-34 | 139 |
MS.gene062929.t1 | AT4G35300 | 31.950 | 241 | 148 | 4 | 268 | 499 | 505 | 738 | 3.44e-23 | 103 |
MS.gene062929.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 1.02e-34 | 139 |
MS.gene062929.t1 | AT4G35300 | 31.950 | 241 | 148 | 4 | 268 | 499 | 505 | 738 | 3.44e-23 | 103 |
MS.gene062929.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 1.02e-34 | 139 |
MS.gene062929.t1 | AT4G35300 | 31.950 | 241 | 148 | 4 | 268 | 499 | 505 | 738 | 3.44e-23 | 103 |
MS.gene062929.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 1.02e-34 | 139 |
MS.gene062929.t1 | AT4G35300 | 31.950 | 241 | 148 | 4 | 268 | 499 | 505 | 738 | 3.44e-23 | 103 |
MS.gene062929.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 1.02e-34 | 139 |
MS.gene062929.t1 | AT4G35300 | 31.950 | 241 | 148 | 4 | 268 | 499 | 505 | 738 | 3.44e-23 | 103 |
MS.gene062929.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 1.02e-34 | 139 |
MS.gene062929.t1 | AT4G35300 | 31.950 | 241 | 148 | 4 | 268 | 499 | 505 | 738 | 3.44e-23 | 103 |
MS.gene062929.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 1.02e-34 | 139 |
MS.gene062929.t1 | AT4G35300 | 31.950 | 241 | 148 | 4 | 268 | 499 | 505 | 738 | 3.44e-23 | 103 |
MS.gene062929.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 1.11e-34 | 139 |
MS.gene062929.t1 | AT4G35300 | 32.218 | 239 | 146 | 4 | 268 | 497 | 495 | 726 | 3.30e-23 | 104 |
MS.gene062929.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 1.11e-34 | 139 |
MS.gene062929.t1 | AT4G35300 | 32.218 | 239 | 146 | 4 | 268 | 497 | 495 | 726 | 3.30e-23 | 104 |
MS.gene062929.t1 | AT4G35300 | 35.743 | 249 | 135 | 8 | 38 | 266 | 15 | 258 | 1.11e-34 | 139 |
MS.gene062929.t1 | AT4G35300 | 32.218 | 239 | 146 | 4 | 268 | 497 | 495 | 726 | 3.30e-23 | 104 |
MS.gene062929.t1 | AT1G77210 | 26.331 | 357 | 238 | 8 | 139 | 493 | 9 | 342 | 7.97e-34 | 131 |
MS.gene062929.t1 | AT3G20460 | 25.336 | 446 | 304 | 9 | 42 | 486 | 68 | 485 | 9.03e-31 | 125 |
MS.gene062929.t1 | AT1G08920 | 24.835 | 455 | 303 | 9 | 38 | 486 | 43 | 464 | 1.77e-30 | 124 |
MS.gene062929.t1 | AT1G54730 | 26.899 | 316 | 206 | 4 | 38 | 353 | 43 | 333 | 3.36e-30 | 121 |
MS.gene062929.t1 | AT1G08900 | 26.667 | 405 | 269 | 8 | 38 | 441 | 36 | 413 | 4.76e-30 | 122 |
MS.gene062929.t1 | AT3G51490 | 38.235 | 170 | 102 | 3 | 84 | 252 | 13 | 180 | 5.30e-30 | 124 |
MS.gene062929.t1 | AT3G51490 | 31.535 | 241 | 147 | 4 | 269 | 499 | 450 | 682 | 2.02e-24 | 107 |
MS.gene062929.t1 | AT1G54730 | 25.532 | 376 | 233 | 7 | 38 | 413 | 43 | 371 | 5.85e-30 | 121 |
MS.gene062929.t1 | AT2G48020 | 26.496 | 351 | 233 | 5 | 20 | 370 | 21 | 346 | 8.39e-29 | 118 |
MS.gene062929.t1 | AT1G08920 | 25.000 | 464 | 298 | 12 | 38 | 486 | 43 | 471 | 5.01e-28 | 117 |
MS.gene062929.t1 | AT1G54730 | 26.531 | 294 | 194 | 4 | 38 | 330 | 43 | 315 | 1.26e-26 | 110 |
MS.gene062929.t1 | AT1G54730 | 26.531 | 294 | 194 | 4 | 38 | 330 | 43 | 315 | 1.26e-26 | 110 |
MS.gene062929.t1 | AT2G48020 | 25.595 | 336 | 225 | 5 | 20 | 355 | 21 | 331 | 1.05e-25 | 108 |
MS.gene062929.t1 | AT3G05155 | 24.646 | 353 | 235 | 9 | 3 | 353 | 2 | 325 | 1.55e-24 | 104 |
MS.gene062929.t1 | AT4G35300 | 31.950 | 241 | 148 | 4 | 268 | 499 | 308 | 541 | 3.03e-23 | 103 |
MS.gene062929.t1 | AT1G08920 | 25.126 | 398 | 257 | 9 | 38 | 429 | 43 | 405 | 1.24e-22 | 100 |
MS.gene062929.t1 | AT1G79820 | 30.049 | 203 | 132 | 4 | 32 | 229 | 59 | 256 | 6.36e-18 | 86.7 |
MS.gene062929.t1 | AT1G79820 | 34.667 | 150 | 88 | 3 | 338 | 484 | 297 | 439 | 4.49e-13 | 71.6 |
MS.gene062929.t1 | AT5G43340 | 24.236 | 458 | 260 | 16 | 79 | 486 | 84 | 504 | 7.06e-18 | 87.0 |
MS.gene062929.t1 | AT1G79820 | 34.667 | 150 | 88 | 3 | 338 | 484 | 235 | 377 | 4.38e-13 | 71.2 |
MS.gene062929.t1 | AT1G73220 | 28.184 | 369 | 196 | 17 | 77 | 425 | 147 | 466 | 1.65e-11 | 67.0 |
MS.gene062929.t1 | AT3G13050 | 25.287 | 435 | 272 | 12 | 79 | 482 | 75 | 487 | 3.22e-11 | 66.2 |
MS.gene062929.t1 | AT3G13050 | 25.287 | 435 | 272 | 12 | 79 | 482 | 75 | 487 | 3.22e-11 | 66.2 |
MS.gene062929.t1 | AT3G13050 | 25.287 | 435 | 272 | 12 | 79 | 482 | 75 | 487 | 3.22e-11 | 66.2 |
MS.gene062929.t1 | AT3G13050 | 25.287 | 435 | 272 | 12 | 79 | 482 | 75 | 487 | 3.22e-11 | 66.2 |
Find 149 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGAAATCTCTTGAGGATTT+TGG | 0.103175 | 4.2:-35812790 | MS.gene062929:CDS |
GGTCCAATTACGTGGGTTTA+TGG | 0.194171 | 4.2:-35810980 | MS.gene062929:CDS |
CCCAGCCTTCTCAAAGATTC+TGG | 0.218841 | 4.2:+35811267 | None:intergenic |
TCAGCTGTGGCACTGGCTTT+TGG | 0.229121 | 4.2:+35810707 | None:intergenic |
ACAAGCAAACTTGTTCCTTT+TGG | 0.235091 | 4.2:+35812753 | None:intergenic |
GAACCATAAACCCACGTAAT+TGG | 0.239547 | 4.2:+35810977 | None:intergenic |
TCTTGTCATTGGTGCTTAAC+TGG | 0.242911 | 4.2:+35810666 | None:intergenic |
CTTCGTTGGAGCTGTACTTA+TGG | 0.250654 | 4.2:-35812143 | MS.gene062929:CDS |
TTTGTACGTCTGTTACTTTA+AGG | 0.257223 | 4.2:+35812281 | None:intergenic |
CCCATAGGTTCTTACATTGC+AGG | 0.273558 | 4.2:-35812223 | MS.gene062929:CDS |
ATGTTTGGTCGTTTCTTTGC+TGG | 0.276505 | 4.2:-35812094 | MS.gene062929:CDS |
CCCTGTTATCTCTTTAATAT+CGG | 0.279960 | 4.2:+35811465 | None:intergenic |
TTCGTTGGAGCTGTACTTAT+GGG | 0.286828 | 4.2:-35812142 | MS.gene062929:CDS |
TGCTTGTGCTTGTGCTATCT+TGG | 0.301856 | 4.2:-35812737 | MS.gene062929:CDS |
GTAGGATACATTTCAAACTA+TGG | 0.303555 | 4.2:-35811685 | MS.gene062929:CDS |
GCCGATATTAAAGAGATAAC+AGG | 0.332161 | 4.2:-35811466 | MS.gene062929:CDS |
CTATTGGTGCGGTGGTGAAT+AGG | 0.339102 | 4.2:-35810916 | MS.gene062929:CDS |
CTCGTTGCCAAGGGTCGATT+AGG | 0.345950 | 4.2:-35811550 | MS.gene062929:CDS |
ACTTCCATCCTACTTGGATA+TGG | 0.364246 | 4.2:-35812706 | MS.gene062929:intron |
CGAGCTCAAGGCGTGTCTAT+TGG | 0.367306 | 4.2:-35810932 | MS.gene062929:CDS |
AACATGAGAAATGCGTAGTT+TGG | 0.369762 | 4.2:+35812112 | None:intergenic |
AAGGGTCCTTTGGTAATCTA+TGG | 0.369891 | 4.2:-35810736 | MS.gene062929:CDS |
CCCTGCAATGTAAGAACCTA+TGG | 0.375747 | 4.2:+35812222 | None:intergenic |
CACTCCTTCAGCTGTGGCAC+TGG | 0.380110 | 4.2:+35810700 | None:intergenic |
AACTACGCATTTCTCATGTT+TGG | 0.380920 | 4.2:-35812109 | MS.gene062929:CDS |
GAAAACAGTGTTCGTCTTAG+TGG | 0.383926 | 4.2:-35811194 | MS.gene062929:CDS |
TTCTTTGCTGGTGTTGGCAT+AGG | 0.388164 | 4.2:-35812082 | MS.gene062929:CDS |
AAAACATTGGAGGAAATAGA+AGG | 0.397984 | 4.2:-35810755 | MS.gene062929:CDS |
CACATCTTTATTGCCTCCCT+CGG | 0.408711 | 4.2:-35811343 | MS.gene062929:CDS |
GTTACAGTCACAAAAGTTCA+AGG | 0.409782 | 4.2:-35811415 | MS.gene062929:CDS |
TCGTTGCCAAGGGTCGATTA+GGG | 0.411244 | 4.2:-35811549 | MS.gene062929:CDS |
CCCAGAATCTTTGAGAAGGC+TGG | 0.421941 | 4.2:-35811268 | MS.gene062929:CDS |
TATGCAGCTACTTTCTCAAT+AGG | 0.423162 | 4.2:-35811007 | MS.gene062929:CDS |
CACTTCTTTGCACAAGCCAC+TGG | 0.424604 | 4.2:-35811316 | MS.gene062929:CDS |
CCAGCCTTCTCAAAGATTCT+GGG | 0.429982 | 4.2:+35811268 | None:intergenic |
TCCAAGGCCATCACCATTGG+TGG | 0.430139 | 4.2:-35810854 | MS.gene062929:CDS |
GGCTTCCCCTAATCGACCCT+TGG | 0.433452 | 4.2:+35811543 | None:intergenic |
TGGTGAATAGGGTCACGAGC+GGG | 0.434591 | 4.2:-35810904 | MS.gene062929:CDS |
TCTATGACTTCCATCCTACT+TGG | 0.436140 | 4.2:-35812712 | MS.gene062929:CDS |
CGTTACACGATTGTTCTTGC+CGG | 0.436927 | 4.2:-35812175 | MS.gene062929:CDS |
GGTCGTTTCTTTGCTGGTGT+TGG | 0.442322 | 4.2:-35812088 | MS.gene062929:CDS |
CCCACCAATGGTGATGGCCT+TGG | 0.443102 | 4.2:+35810853 | None:intergenic |
GAGGAAATAGAAGGGTCCTT+TGG | 0.444344 | 4.2:-35810746 | MS.gene062929:CDS |
CCATGCCCGAGTCACCTAGA+TGG | 0.454068 | 4.2:-35811573 | MS.gene062929:CDS |
GAGACTTCAGATGTATAAAC+AGG | 0.455110 | 4.2:+35812040 | None:intergenic |
TATTGGTGCGGTGGTGAATA+GGG | 0.470445 | 4.2:-35810915 | MS.gene062929:CDS |
ACCTAGATGGCTCGTTGCCA+AGG | 0.471470 | 4.2:-35811560 | MS.gene062929:CDS |
TGACTCGGGCATGGCTAATA+CGG | 0.476323 | 4.2:+35811582 | None:intergenic |
CAATGGTGATGGCCTTGGAC+AGG | 0.480083 | 4.2:+35810858 | None:intergenic |
TTCAGGTATTTCTGAATGGA+GGG | 0.481942 | 4.2:-35811714 | MS.gene062929:intron |
TCTTTGCTGGTGTTGGCATA+GGG | 0.483026 | 4.2:-35812081 | MS.gene062929:CDS |
CCAAGGCCATCACCATTGGT+GGG | 0.484140 | 4.2:-35810853 | MS.gene062929:CDS |
GGAAGCCACGAGATGAAGTA+GGG | 0.490590 | 4.2:+35812017 | None:intergenic |
GTCCTCAAAAGAAGCCCAAA+AGG | 0.492436 | 4.2:-35812768 | MS.gene062929:CDS |
AAGAACCTATGGGAGAATAT+AGG | 0.496870 | 4.2:+35812233 | None:intergenic |
CCCTTGGCAACGAGCCATCT+AGG | 0.497077 | 4.2:+35811559 | None:intergenic |
CTTCTCGCAACTGTAGCTGT+TGG | 0.497312 | 4.2:-35811223 | MS.gene062929:CDS |
GCTACTTTCTCAATAGGATC+AGG | 0.500947 | 4.2:-35811001 | MS.gene062929:CDS |
CTGTCCAAGGCCATCACCAT+TGG | 0.502182 | 4.2:-35810857 | MS.gene062929:CDS |
CCGTTGAGGCTTCGAGCTCA+AGG | 0.502797 | 4.2:-35810944 | MS.gene062929:CDS |
AATAATCTCACTTCTGACAT+TGG | 0.504708 | 4.2:-35811110 | MS.gene062929:CDS |
ACATCTTTATTGCCTCCCTC+GGG | 0.507173 | 4.2:-35811342 | MS.gene062929:CDS |
TGCGAGAAGCTTATTTGTGT+CGG | 0.508276 | 4.2:+35811237 | None:intergenic |
AGTTGTAAAAGTCTTGTCAT+TGG | 0.509427 | 4.2:+35810655 | None:intergenic |
GGGAGACTTTCTGACTGGAT+TGG | 0.511368 | 4.2:-35812202 | MS.gene062929:CDS |
AAAGTCGTCGTCGCAGTCCA+AGG | 0.516106 | 4.2:+35811438 | None:intergenic |
AGGAAGCCACGAGATGAAGT+AGG | 0.516243 | 4.2:+35812016 | None:intergenic |
AAGTTCAAGGCAAAGGCGTA+TGG | 0.516614 | 4.2:-35811402 | MS.gene062929:CDS |
CCATAGGTTCTTACATTGCA+GGG | 0.517766 | 4.2:-35812222 | MS.gene062929:CDS |
TATGGTTGGCGAGTGATGCT+TGG | 0.521262 | 4.2:-35811640 | MS.gene062929:CDS |
CCAGAATCTTTGAGAAGGCT+GGG | 0.523498 | 4.2:-35811267 | MS.gene062929:CDS |
AACGAGCCATCTAGGTGACT+CGG | 0.523691 | 4.2:+35811567 | None:intergenic |
TCCGTTCACTCCTTCAGCTG+TGG | 0.524294 | 4.2:+35810694 | None:intergenic |
TGGCGAGTGATGCTTGGAAT+CGG | 0.525279 | 4.2:-35811634 | MS.gene062929:CDS |
TTGCAGGGAGACTTTCTGAC+TGG | 0.530675 | 4.2:-35812207 | MS.gene062929:CDS |
TTTCAGGTATTTCTGAATGG+AGG | 0.531761 | 4.2:-35811715 | MS.gene062929:intron |
TGGCTAATACGGCCATAGCT+AGG | 0.533351 | 4.2:+35811593 | None:intergenic |
AATATCTGATTCTAAAGAAG+AGG | 0.533914 | 4.2:-35811503 | MS.gene062929:CDS |
GTACAAATTGAAGTTCTCCT+AGG | 0.535054 | 4.2:-35812265 | MS.gene062929:CDS |
ATTCAAACGCCACACTGACA+TGG | 0.536095 | 4.2:-35811063 | MS.gene062929:CDS |
AACAGTTCTGAAATCTCTTG+AGG | 0.536753 | 4.2:-35812797 | MS.gene062929:CDS |
TATTGAGAAAGTAGCTGCAT+AGG | 0.541536 | 4.2:+35811009 | None:intergenic |
CCCTTCTGTAATCCTAGCTA+TGG | 0.542279 | 4.2:-35811605 | MS.gene062929:CDS |
AAAGCCAGTGCCACAGCTGA+AGG | 0.545456 | 4.2:-35810704 | MS.gene062929:CDS |
TGTACTTACCATATCCAAGT+AGG | 0.548055 | 4.2:+35812698 | None:intergenic |
TCCAACGAAGAAAATCAAAC+CGG | 0.549115 | 4.2:+35812156 | None:intergenic |
GAAAGCCCCACCAATGGTGA+TGG | 0.550600 | 4.2:+35810847 | None:intergenic |
CAAGGCCATCACCATTGGTG+GGG | 0.554135 | 4.2:-35810852 | MS.gene062929:CDS |
TTGTTGTTAACCAGTGTAGG+TGG | 0.554692 | 4.2:-35811136 | MS.gene062929:CDS |
CTTCCTCACTTCCTTGCCTG+AGG | 0.555174 | 4.2:-35811999 | MS.gene062929:intron |
ATAAAGATGTGACGAACTGC+AGG | 0.563031 | 4.2:+35811355 | None:intergenic |
AAGTCGTCGTCGCAGTCCAA+GGG | 0.563990 | 4.2:+35811439 | None:intergenic |
TTCAAACGCCACACTGACAT+GGG | 0.567033 | 4.2:-35811062 | MS.gene062929:CDS |
AGCTAGGATTACAGAAGGGA+TGG | 0.568290 | 4.2:+35811609 | None:intergenic |
AATATAGGTTTATGATACCT+AGG | 0.569110 | 4.2:+35812248 | None:intergenic |
GGTGAATAGGGTCACGAGCG+GGG | 0.569964 | 4.2:-35810903 | MS.gene062929:CDS |
GATTATTAACCCACCTACAC+TGG | 0.571276 | 4.2:+35811126 | None:intergenic |
CGGGCATTGCAATTGTCGCG+TGG | 0.571523 | 4.2:-35810814 | MS.gene062929:CDS |
CCTTGAGCTCGAAGCCTCAA+CGG | 0.572753 | 4.2:+35810944 | None:intergenic |
AGAGATAACAGGGATCCCCT+TGG | 0.572972 | 4.2:-35811455 | MS.gene062929:CDS |
ATAAACCTATATTCTCCCAT+AGG | 0.576460 | 4.2:-35812238 | MS.gene062929:CDS |
GTTCTGAAATATTTCCGTTG+AGG | 0.580014 | 4.2:-35810958 | MS.gene062929:CDS |
CCTAGATGGCTCGTTGCCAA+GGG | 0.580224 | 4.2:-35811559 | MS.gene062929:CDS |
CTTACCATATCCAAGTAGGA+TGG | 0.584589 | 4.2:+35812702 | None:intergenic |
CCATCTAGGTGACTCGGGCA+TGG | 0.586844 | 4.2:+35811573 | None:intergenic |
TAGAAAACTTGCCTCAGGCA+AGG | 0.589054 | 4.2:+35811988 | None:intergenic |
GCCATAGCTAGGATTACAGA+AGG | 0.590270 | 4.2:+35811604 | None:intergenic |
CCTGCAATGTAAGAACCTAT+GGG | 0.590311 | 4.2:+35812223 | None:intergenic |
AACACAAGGCAAAACATTGG+AGG | 0.590671 | 4.2:-35810765 | MS.gene062929:CDS |
TTTCCTCCATAGATTACCAA+AGG | 0.590920 | 4.2:+35810730 | None:intergenic |
CACTCGCCAACCATAACGGA+GGG | 0.592278 | 4.2:+35811648 | None:intergenic |
CTCGCCAACCATAACGGAGG+GGG | 0.592645 | 4.2:+35811650 | None:intergenic |
TTGCCTCAGGCAAGGAAGTG+AGG | 0.594555 | 4.2:+35811996 | None:intergenic |
GTCACAAAAGTTCAAGGCAA+AGG | 0.595482 | 4.2:-35811409 | MS.gene062929:CDS |
GCATCACTCGCCAACCATAA+CGG | 0.596064 | 4.2:+35811644 | None:intergenic |
TGAAACACAAGGCAAAACAT+TGG | 0.596171 | 4.2:-35810768 | MS.gene062929:CDS |
AATGGTGATGGCCTTGGACA+GGG | 0.596717 | 4.2:+35810859 | None:intergenic |
GGACAGGGACAGAAAAGTCA+TGG | 0.607404 | 4.2:+35810874 | None:intergenic |
ACGAGCCATCTAGGTGACTC+GGG | 0.608653 | 4.2:+35811568 | None:intergenic |
GTCTCCCCTACTTCATCTCG+TGG | 0.611163 | 4.2:-35812022 | MS.gene062929:CDS |
TAGGATCAGGTCCAATTACG+TGG | 0.612410 | 4.2:-35810988 | MS.gene062929:CDS |
TGTTGTTAACCAGTGTAGGT+GGG | 0.615220 | 4.2:-35811135 | MS.gene062929:CDS |
GGTCCTTTGGTAATCTATGG+AGG | 0.620543 | 4.2:-35810733 | MS.gene062929:CDS |
AAGAAAGAAAGCCCCACCAA+TGG | 0.624358 | 4.2:+35810841 | None:intergenic |
TAGTCCCAGAATCTTTGAGA+AGG | 0.627740 | 4.2:-35811272 | MS.gene062929:CDS |
GTGGTGAATAGGGTCACGAG+CGG | 0.630839 | 4.2:-35810905 | MS.gene062929:CDS |
GAAGCCACGAGATGAAGTAG+GGG | 0.631896 | 4.2:+35812018 | None:intergenic |
CCGATATTAAAGAGATAACA+GGG | 0.632385 | 4.2:-35811465 | MS.gene062929:CDS |
ACAACACGCGCCTCCCAACA+CGG | 0.633064 | 4.2:+35811155 | None:intergenic |
ACAGATATTGGTGTGATGAG+TGG | 0.633157 | 4.2:-35812328 | MS.gene062929:intron |
GCCACAGCTGAAGGAGTGAA+CGG | 0.634020 | 4.2:-35810695 | MS.gene062929:CDS |
CGTTGCCAAGGGTCGATTAG+GGG | 0.634337 | 4.2:-35811548 | MS.gene062929:CDS |
TCAAGGCGTGTCTATTGGTG+CGG | 0.635436 | 4.2:-35810927 | MS.gene062929:CDS |
AAACATTGGAGGAAATAGAA+GGG | 0.640963 | 4.2:-35810754 | MS.gene062929:CDS |
GTGTTGTTGTTAACCAGTGT+AGG | 0.645416 | 4.2:-35811139 | MS.gene062929:CDS |
ATGTGACGAACTGCAGGTGT+AGG | 0.646953 | 4.2:+35811361 | None:intergenic |
AGGCGTGTCTATTGGTGCGG+TGG | 0.647052 | 4.2:-35810924 | MS.gene062929:CDS |
AACAACAGCGTCTATGCCAG+TGG | 0.658909 | 4.2:+35811300 | None:intergenic |
TGCAAAGAAGTGAATCCCGA+GGG | 0.660277 | 4.2:+35811327 | None:intergenic |
AGGATCAGGTCCAATTACGT+GGG | 0.664159 | 4.2:-35810987 | MS.gene062929:CDS |
ATAAACAGGAGCAATCAAGA+AGG | 0.665096 | 4.2:+35812054 | None:intergenic |
CGAAATAGCCCATGTCAGTG+TGG | 0.673841 | 4.2:+35811054 | None:intergenic |
AGTCGTCGTCGCAGTCCAAG+GGG | 0.678623 | 4.2:+35811440 | None:intergenic |
GTGCAAAGAAGTGAATCCCG+AGG | 0.683875 | 4.2:+35811326 | None:intergenic |
TCACTCGCCAACCATAACGG+AGG | 0.684664 | 4.2:+35811647 | None:intergenic |
AAAGAAGTGAATCCCGAGGG+AGG | 0.688647 | 4.2:+35811330 | None:intergenic |
CCATAGCTAGGATTACAGAA+GGG | 0.691325 | 4.2:+35811605 | None:intergenic |
ACTCGCCAACCATAACGGAG+GGG | 0.704620 | 4.2:+35811649 | None:intergenic |
ACTATGCTCCCTGAAACACA+AGG | 0.725699 | 4.2:-35810779 | MS.gene062929:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATGGATTAAATTATTTATTA+TGG | + | chr4.2:35811710-35811729 | None:intergenic | 10.0% |
!!! | TATTTTATAAAGAACTTTTT+TGG | + | chr4.2:35811941-35811960 | None:intergenic | 10.0% |
!! | TATTGATAGAAATGAATTAA+TGG | + | chr4.2:35810800-35810819 | None:intergenic | 15.0% |
!! | ATAGAAATGAATTAATGGTA+TGG | + | chr4.2:35810795-35810814 | None:intergenic | 20.0% |
!! | ATCAAAAAAGAAGATTTCTT+AGG | - | chr4.2:35810824-35810843 | MS.gene062929:CDS | 20.0% |
!! | GTTATTATTGTAACAGATAT+TGG | - | chr4.2:35811120-35811139 | MS.gene062929:CDS | 20.0% |
! | AATATAGGTTTATGATACCT+AGG | + | chr4.2:35811215-35811234 | None:intergenic | 25.0% |
! | CAAGAAAGAATAGAGATATA+AGG | - | chr4.2:35810913-35810932 | MS.gene062929:CDS | 25.0% |
! | GAAAATAACATGTCATTCAA+TGG | + | chr4.2:35811729-35811748 | None:intergenic | 25.0% |
! | TCTTTCTTGTACAAACAAAT+GGG | + | chr4.2:35810902-35810921 | None:intergenic | 25.0% |
! | TTCTTTCTTGTACAAACAAA+TGG | + | chr4.2:35810903-35810922 | None:intergenic | 25.0% |
!! | AAGGTCTCTTTTTATATAGA+TGG | + | chr4.2:35811163-35811182 | None:intergenic | 25.0% |
!! | AATATCTGATTCTAAAGAAG+AGG | - | chr4.2:35811957-35811976 | MS.gene062929:intron | 25.0% |
!!! | TATTTTCAGGTATTTCTGAA+TGG | - | chr4.2:35811742-35811761 | MS.gene062929:intron | 25.0% |
!!! | TTGAATGACATGTTATTTTC+AGG | - | chr4.2:35811729-35811748 | MS.gene062929:intron | 25.0% |
AAAACATTGGAGGAAATAGA+AGG | - | chr4.2:35812705-35812724 | MS.gene062929:intron | 30.0% | |
AAAATTAGAAAACTTGCCTC+AGG | + | chr4.2:35811480-35811499 | None:intergenic | 30.0% | |
AAACATTGGAGGAAATAGAA+GGG | - | chr4.2:35812706-35812725 | MS.gene062929:intron | 30.0% | |
AACACGGTCTAATAAAAAAG+TGG | + | chr4.2:35812292-35812311 | None:intergenic | 30.0% | |
AATAATCTCACTTCTGACAT+TGG | - | chr4.2:35812350-35812369 | MS.gene062929:intron | 30.0% | |
ATAAACCTATATTCTCCCAT+AGG | - | chr4.2:35811222-35811241 | MS.gene062929:CDS | 30.0% | |
CCCTGTTATCTCTTTAATAT+CGG | + | chr4.2:35811998-35812017 | None:intergenic | 30.0% | |
CCGATATTAAAGAGATAACA+GGG | - | chr4.2:35811995-35812014 | MS.gene062929:intron | 30.0% | |
GTAGGATACATTTCAAACTA+TGG | - | chr4.2:35811775-35811794 | MS.gene062929:intron | 30.0% | |
TATGGCAACATTGATAAACA+TGG | + | chr4.2:35811692-35811711 | None:intergenic | 30.0% | |
! | AAACATGGATTTAGTTTAGC+TGG | + | chr4.2:35811677-35811696 | None:intergenic | 30.0% |
! | AGTTGTAAAAGTCTTGTCAT+TGG | + | chr4.2:35812808-35812827 | None:intergenic | 30.0% |
! | TGACAAGACTTTTACAACTA+CGG | - | chr4.2:35812809-35812828 | MS.gene062929:CDS | 30.0% |
!! | TTTGTACGTCTGTTACTTTA+AGG | + | chr4.2:35811182-35811201 | None:intergenic | 30.0% |
!!! | ACTTTTTTATTAGACCGTGT+TGG | - | chr4.2:35812291-35812310 | MS.gene062929:CDS | 30.0% |
!!! | CTTTTTTATTAGACCGTGTT+GGG | - | chr4.2:35812292-35812311 | MS.gene062929:CDS | 30.0% |
AACATGAGAAATGCGTAGTT+TGG | + | chr4.2:35811351-35811370 | None:intergenic | 35.0% | |
AACTACGCATTTCTCATGTT+TGG | - | chr4.2:35811351-35811370 | MS.gene062929:CDS | 35.0% | |
AAGAACCTATGGGAGAATAT+AGG | + | chr4.2:35811230-35811249 | None:intergenic | 35.0% | |
ATAAACAGGAGCAATCAAGA+AGG | + | chr4.2:35811409-35811428 | None:intergenic | 35.0% | |
GAAAATCGTAATCTCAACGA+CGG | + | chr4.2:35811533-35811552 | None:intergenic | 35.0% | |
GAGACTTCAGATGTATAAAC+AGG | + | chr4.2:35811423-35811442 | None:intergenic | 35.0% | |
GCCGATATTAAAGAGATAAC+AGG | - | chr4.2:35811994-35812013 | MS.gene062929:intron | 35.0% | |
GTACAAATTGAAGTTCTCCT+AGG | - | chr4.2:35811195-35811214 | MS.gene062929:CDS | 35.0% | |
GTTACAGTCACAAAAGTTCA+AGG | - | chr4.2:35812045-35812064 | MS.gene062929:CDS | 35.0% | |
TATTGAGAAAGTAGCTGCAT+AGG | + | chr4.2:35812454-35812473 | None:intergenic | 35.0% | |
TCCAACGAAGAAAATCAAAC+CGG | + | chr4.2:35811307-35811326 | None:intergenic | 35.0% | |
TGAAACACAAGGCAAAACAT+TGG | - | chr4.2:35812692-35812711 | MS.gene062929:intron | 35.0% | |
TGTACTTACCATATCCAAGT+AGG | + | chr4.2:35810765-35810784 | None:intergenic | 35.0% | |
TTTCCTCCATAGATTACCAA+AGG | + | chr4.2:35812733-35812752 | None:intergenic | 35.0% | |
! | AATGTTTTGCCTTGTGTTTC+AGG | + | chr4.2:35812693-35812712 | None:intergenic | 35.0% |
! | ATGTTTTGCCTTGTGTTTCA+GGG | + | chr4.2:35812692-35812711 | None:intergenic | 35.0% |
! | CTGAAATCTCTTGAGGATTT+TGG | - | chr4.2:35810670-35810689 | MS.gene062929:CDS | 35.0% |
! | GATTTAGTTTAGCTGGTTGA+TGG | + | chr4.2:35811670-35811689 | None:intergenic | 35.0% |
! | TATGCAGCTACTTTCTCAAT+AGG | - | chr4.2:35812453-35812472 | MS.gene062929:intron | 35.0% |
! | TTCAGGTATTTCTGAATGGA+GGG | - | chr4.2:35811746-35811765 | MS.gene062929:intron | 35.0% |
! | TTTCAGGTATTTCTGAATGG+AGG | - | chr4.2:35811745-35811764 | MS.gene062929:intron | 35.0% |
!! | AACAGTTCTGAAATCTCTTG+AGG | - | chr4.2:35810663-35810682 | MS.gene062929:CDS | 35.0% |
!! | ACAAGCAAACTTGTTCCTTT+TGG | + | chr4.2:35810710-35810729 | None:intergenic | 35.0% |
!! | CAAGCAAACTTGTTCCTTTT+GGG | + | chr4.2:35810709-35810728 | None:intergenic | 35.0% |
!! | GTTCTGAAATATTTCCGTTG+AGG | - | chr4.2:35812502-35812521 | MS.gene062929:intron | 35.0% |
AACACAAGGCAAAACATTGG+AGG | - | chr4.2:35812695-35812714 | MS.gene062929:intron | 40.0% | |
ACAGATATTGGTGTGATGAG+TGG | - | chr4.2:35811132-35811151 | MS.gene062929:CDS | 40.0% | |
ACTTCCATCCTACTTGGATA+TGG | - | chr4.2:35810754-35810773 | MS.gene062929:CDS | 40.0% | |
ATAAAGATGTGACGAACTGC+AGG | + | chr4.2:35812108-35812127 | None:intergenic | 40.0% | |
ATGTTTGGTCGTTTCTTTGC+TGG | - | chr4.2:35811366-35811385 | MS.gene062929:CDS | 40.0% | |
CCATAGCTAGGATTACAGAA+GGG | + | chr4.2:35811858-35811877 | None:intergenic | 40.0% | |
CCATAGGTTCTTACATTGCA+GGG | - | chr4.2:35811238-35811257 | MS.gene062929:CDS | 40.0% | |
CCTGCAATGTAAGAACCTAT+GGG | + | chr4.2:35811240-35811259 | None:intergenic | 40.0% | |
CTTACCATATCCAAGTAGGA+TGG | + | chr4.2:35810761-35810780 | None:intergenic | 40.0% | |
GAAAACAGTGTTCGTCTTAG+TGG | - | chr4.2:35812266-35812285 | MS.gene062929:CDS | 40.0% | |
GAACCATAAACCCACGTAAT+TGG | + | chr4.2:35812486-35812505 | None:intergenic | 40.0% | |
GATTATTAACCCACCTACAC+TGG | + | chr4.2:35812337-35812356 | None:intergenic | 40.0% | |
GTCACAAAAGTTCAAGGCAA+AGG | - | chr4.2:35812051-35812070 | MS.gene062929:CDS | 40.0% | |
TCTATGACTTCCATCCTACT+TGG | - | chr4.2:35810748-35810767 | MS.gene062929:CDS | 40.0% | |
TGCGAGAAGCTTATTTGTGT+CGG | + | chr4.2:35812226-35812245 | None:intergenic | 40.0% | |
TGTTGTTAACCAGTGTAGGT+GGG | - | chr4.2:35812325-35812344 | MS.gene062929:CDS | 40.0% | |
TTCGTTGGAGCTGTACTTAT+GGG | - | chr4.2:35811318-35811337 | MS.gene062929:CDS | 40.0% | |
! | AAGGGTCCTTTGGTAATCTA+TGG | - | chr4.2:35812724-35812743 | MS.gene062929:CDS | 40.0% |
! | GCTACTTTCTCAATAGGATC+AGG | - | chr4.2:35812459-35812478 | MS.gene062929:intron | 40.0% |
! | GTGTTGTTGTTAACCAGTGT+AGG | - | chr4.2:35812321-35812340 | MS.gene062929:CDS | 40.0% |
! | TAGTCCCAGAATCTTTGAGA+AGG | - | chr4.2:35812188-35812207 | MS.gene062929:CDS | 40.0% |
! | TCTTGTCATTGGTGCTTAAC+TGG | + | chr4.2:35812797-35812816 | None:intergenic | 40.0% |
! | TGGGGCTTTCTTTCTTTTTG+CGG | - | chr4.2:35812626-35812645 | MS.gene062929:intron | 40.0% |
! | TTCCTTTTGGGCTTCTTTTG+AGG | + | chr4.2:35810697-35810716 | None:intergenic | 40.0% |
! | TTGTTGTTAACCAGTGTAGG+TGG | - | chr4.2:35812324-35812343 | MS.gene062929:CDS | 40.0% |
! | TTTTATTAGACCGTGTTGGG+AGG | - | chr4.2:35812295-35812314 | MS.gene062929:CDS | 40.0% |
!! | CTGAATGGAGGGATTTTAGT+AGG | - | chr4.2:35811757-35811776 | MS.gene062929:intron | 40.0% |
AAGAAAGAAAGCCCCACCAA+TGG | + | chr4.2:35812622-35812641 | None:intergenic | 45.0% | |
ACATCTTTATTGCCTCCCTC+GGG | - | chr4.2:35812118-35812137 | MS.gene062929:CDS | 45.0% | |
ACTATGCTCCCTGAAACACA+AGG | - | chr4.2:35812681-35812700 | MS.gene062929:intron | 45.0% | |
AGCTAGGATTACAGAAGGGA+TGG | + | chr4.2:35811854-35811873 | None:intergenic | 45.0% | |
AGGATCAGGTCCAATTACGT+GGG | - | chr4.2:35812473-35812492 | MS.gene062929:intron | 45.0% | |
ATTCAAACGCCACACTGACA+TGG | - | chr4.2:35812397-35812416 | MS.gene062929:intron | 45.0% | |
CACATCTTTATTGCCTCCCT+CGG | - | chr4.2:35812117-35812136 | MS.gene062929:CDS | 45.0% | |
CCAGCCTTCTCAAAGATTCT+GGG | + | chr4.2:35812195-35812214 | None:intergenic | 45.0% | |
CCCATAGGTTCTTACATTGC+AGG | - | chr4.2:35811237-35811256 | MS.gene062929:CDS | 45.0% | |
CCCTGCAATGTAAGAACCTA+TGG | + | chr4.2:35811241-35811260 | None:intergenic | 45.0% | |
CCCTTCTGTAATCCTAGCTA+TGG | - | chr4.2:35811855-35811874 | MS.gene062929:intron | 45.0% | |
CGTTACACGATTGTTCTTGC+CGG | - | chr4.2:35811285-35811304 | MS.gene062929:CDS | 45.0% | |
CTTCGTTGGAGCTGTACTTA+TGG | - | chr4.2:35811317-35811336 | MS.gene062929:CDS | 45.0% | |
GAGGAAATAGAAGGGTCCTT+TGG | - | chr4.2:35812714-35812733 | MS.gene062929:CDS | 45.0% | |
GCCATAGCTAGGATTACAGA+AGG | + | chr4.2:35811859-35811878 | None:intergenic | 45.0% | |
GGTCCAATTACGTGGGTTTA+TGG | - | chr4.2:35812480-35812499 | MS.gene062929:intron | 45.0% | |
GTCCTCAAAAGAAGCCCAAA+AGG | - | chr4.2:35810692-35810711 | MS.gene062929:CDS | 45.0% | |
TAGAAAACTTGCCTCAGGCA+AGG | + | chr4.2:35811475-35811494 | None:intergenic | 45.0% | |
TAGGATCAGGTCCAATTACG+TGG | - | chr4.2:35812472-35812491 | MS.gene062929:intron | 45.0% | |
TATTGGTGCGGTGGTGAATA+GGG | - | chr4.2:35812545-35812564 | MS.gene062929:intron | 45.0% | |
TGCAAAGAAGTGAATCCCGA+GGG | + | chr4.2:35812136-35812155 | None:intergenic | 45.0% | |
TGCTTGTGCTTGTGCTATCT+TGG | - | chr4.2:35810723-35810742 | MS.gene062929:CDS | 45.0% | |
TTCAAACGCCACACTGACAT+GGG | - | chr4.2:35812398-35812417 | MS.gene062929:intron | 45.0% | |
! | AAGTTCAAGGCAAAGGCGTA+TGG | - | chr4.2:35812058-35812077 | MS.gene062929:CDS | 45.0% |
! | CCAGAATCTTTGAGAAGGCT+GGG | - | chr4.2:35812193-35812212 | MS.gene062929:CDS | 45.0% |
! | GGGGCTTTCTTTCTTTTTGC+GGG | - | chr4.2:35812627-35812646 | MS.gene062929:intron | 45.0% |
! | GGTCCTTTGGTAATCTATGG+AGG | - | chr4.2:35812727-35812746 | MS.gene062929:CDS | 45.0% |
!! | TCTTTGCTGGTGTTGGCATA+GGG | - | chr4.2:35811379-35811398 | MS.gene062929:CDS | 45.0% |
!! | TTCTTTGCTGGTGTTGGCAT+AGG | - | chr4.2:35811378-35811397 | MS.gene062929:CDS | 45.0% |
!!! | GCCGGTTTGATTTTCTTCGT+TGG | - | chr4.2:35811303-35811322 | MS.gene062929:CDS | 45.0% |
AAAGAAGTGAATCCCGAGGG+AGG | + | chr4.2:35812133-35812152 | None:intergenic | 50.0% | |
AACAACAGCGTCTATGCCAG+TGG | + | chr4.2:35812163-35812182 | None:intergenic | 50.0% | |
AACGAGCCATCTAGGTGACT+CGG | + | chr4.2:35811896-35811915 | None:intergenic | 50.0% | |
AGAGATAACAGGGATCCCCT+TGG | - | chr4.2:35812005-35812024 | MS.gene062929:CDS | 50.0% | |
AGGAAGCCACGAGATGAAGT+AGG | + | chr4.2:35811447-35811466 | None:intergenic | 50.0% | |
ATGTGACGAACTGCAGGTGT+AGG | + | chr4.2:35812102-35812121 | None:intergenic | 50.0% | |
CACTTCTTTGCACAAGCCAC+TGG | - | chr4.2:35812144-35812163 | MS.gene062929:CDS | 50.0% | |
CCCAGCCTTCTCAAAGATTC+TGG | + | chr4.2:35812196-35812215 | None:intergenic | 50.0% | |
CGAAATAGCCCATGTCAGTG+TGG | + | chr4.2:35812409-35812428 | None:intergenic | 50.0% | |
CTATTGGTGCGGTGGTGAAT+AGG | - | chr4.2:35812544-35812563 | MS.gene062929:intron | 50.0% | |
CTTCTCGCAACTGTAGCTGT+TGG | - | chr4.2:35812237-35812256 | MS.gene062929:CDS | 50.0% | |
GAAGCCACGAGATGAAGTAG+GGG | + | chr4.2:35811445-35811464 | None:intergenic | 50.0% | |
GCATCACTCGCCAACCATAA+CGG | + | chr4.2:35811819-35811838 | None:intergenic | 50.0% | |
GGAAGCCACGAGATGAAGTA+GGG | + | chr4.2:35811446-35811465 | None:intergenic | 50.0% | |
GGACAGGGACAGAAAAGTCA+TGG | + | chr4.2:35812589-35812608 | None:intergenic | 50.0% | |
GGGAGACTTTCTGACTGGAT+TGG | - | chr4.2:35811258-35811277 | MS.gene062929:CDS | 50.0% | |
GGTCGTTTCTTTGCTGGTGT+TGG | - | chr4.2:35811372-35811391 | MS.gene062929:CDS | 50.0% | |
GTGCAAAGAAGTGAATCCCG+AGG | + | chr4.2:35812137-35812156 | None:intergenic | 50.0% | |
TATGGTTGGCGAGTGATGCT+TGG | - | chr4.2:35811820-35811839 | MS.gene062929:intron | 50.0% | |
TCAAGGCGTGTCTATTGGTG+CGG | - | chr4.2:35812533-35812552 | MS.gene062929:intron | 50.0% | |
TCGTTGCCAAGGGTCGATTA+GGG | - | chr4.2:35811911-35811930 | MS.gene062929:intron | 50.0% | |
TGGCGAGTGATGCTTGGAAT+CGG | - | chr4.2:35811826-35811845 | MS.gene062929:intron | 50.0% | |
TGGCTAATACGGCCATAGCT+AGG | + | chr4.2:35811870-35811889 | None:intergenic | 50.0% | |
TTGCAGGGAGACTTTCTGAC+TGG | - | chr4.2:35811253-35811272 | MS.gene062929:CDS | 50.0% | |
! | CCCAGAATCTTTGAGAAGGC+TGG | - | chr4.2:35812192-35812211 | MS.gene062929:CDS | 50.0% |
! | GACTTTTCTGTCCCTGTCCA+AGG | - | chr4.2:35812590-35812609 | MS.gene062929:intron | 50.0% |
! | TGACTCGGGCATGGCTAATA+CGG | + | chr4.2:35811881-35811900 | None:intergenic | 50.0% |
!! | AATGGTGATGGCCTTGGACA+GGG | + | chr4.2:35812604-35812623 | None:intergenic | 50.0% |
!! | GCTGGTTGATGGATGATGAC+TGG | + | chr4.2:35811659-35811678 | None:intergenic | 50.0% |
AAAGCCAGTGCCACAGCTGA+AGG | - | chr4.2:35812756-35812775 | MS.gene062929:CDS | 55.0% | |
AAAGTCGTCGTCGCAGTCCA+AGG | + | chr4.2:35812025-35812044 | None:intergenic | 55.0% | |
AAGTCGTCGTCGCAGTCCAA+GGG | + | chr4.2:35812024-35812043 | None:intergenic | 55.0% | |
ACCTAGATGGCTCGTTGCCA+AGG | - | chr4.2:35811900-35811919 | MS.gene062929:intron | 55.0% | |
ACGAGCCATCTAGGTGACTC+GGG | + | chr4.2:35811895-35811914 | None:intergenic | 55.0% | |
CAAGGCCATCACCATTGGTG+GGG | - | chr4.2:35812608-35812627 | MS.gene062929:intron | 55.0% | |
CCAAGGCCATCACCATTGGT+GGG | - | chr4.2:35812607-35812626 | MS.gene062929:intron | 55.0% | |
CCTAGATGGCTCGTTGCCAA+GGG | - | chr4.2:35811901-35811920 | MS.gene062929:intron | 55.0% | |
CCTTGAGCTCGAAGCCTCAA+CGG | + | chr4.2:35812519-35812538 | None:intergenic | 55.0% | |
CGAGCTCAAGGCGTGTCTAT+TGG | - | chr4.2:35812528-35812547 | MS.gene062929:intron | 55.0% | |
CGTTGCCAAGGGTCGATTAG+GGG | - | chr4.2:35811912-35811931 | MS.gene062929:intron | 55.0% | |
CTCGTTGCCAAGGGTCGATT+AGG | - | chr4.2:35811910-35811929 | MS.gene062929:intron | 55.0% | |
CTGTCCAAGGCCATCACCAT+TGG | - | chr4.2:35812603-35812622 | MS.gene062929:intron | 55.0% | |
CTTCCTCACTTCCTTGCCTG+AGG | - | chr4.2:35811461-35811480 | MS.gene062929:CDS | 55.0% | |
GAAAGCCCCACCAATGGTGA+TGG | + | chr4.2:35812616-35812635 | None:intergenic | 55.0% | |
GCCACAGCTGAAGGAGTGAA+CGG | - | chr4.2:35812765-35812784 | MS.gene062929:CDS | 55.0% | |
GTCTCCCCTACTTCATCTCG+TGG | - | chr4.2:35811438-35811457 | MS.gene062929:CDS | 55.0% | |
GTGGTGAATAGGGTCACGAG+CGG | - | chr4.2:35812555-35812574 | MS.gene062929:intron | 55.0% | |
TCAAAGCTCCCCCTCCGTTA+TGG | - | chr4.2:35811802-35811821 | MS.gene062929:intron | 55.0% | |
TCACTCGCCAACCATAACGG+AGG | + | chr4.2:35811816-35811835 | None:intergenic | 55.0% | |
TCCAAGGCCATCACCATTGG+TGG | - | chr4.2:35812606-35812625 | MS.gene062929:intron | 55.0% | |
TCCGTTCACTCCTTCAGCTG+TGG | + | chr4.2:35812769-35812788 | None:intergenic | 55.0% | |
TGGTGAATAGGGTCACGAGC+GGG | - | chr4.2:35812556-35812575 | MS.gene062929:intron | 55.0% | |
TTGCCTCAGGCAAGGAAGTG+AGG | + | chr4.2:35811467-35811486 | None:intergenic | 55.0% | |
! | ACTCGCCAACCATAACGGAG+GGG | + | chr4.2:35811814-35811833 | None:intergenic | 55.0% |
! | CACTCGCCAACCATAACGGA+GGG | + | chr4.2:35811815-35811834 | None:intergenic | 55.0% |
!! | CAATGGTGATGGCCTTGGAC+AGG | + | chr4.2:35812605-35812624 | None:intergenic | 55.0% |
!!! | TCAGCTGTGGCACTGGCTTT+TGG | + | chr4.2:35812756-35812775 | None:intergenic | 55.0% |
ACAACACGCGCCTCCCAACA+CGG | + | chr4.2:35812308-35812327 | None:intergenic | 60.0% | |
AGCTCCCCCTCCGTTATGGT+TGG | - | chr4.2:35811806-35811825 | MS.gene062929:intron | 60.0% | |
AGGCGTGTCTATTGGTGCGG+TGG | - | chr4.2:35812536-35812555 | MS.gene062929:intron | 60.0% | |
AGTCGTCGTCGCAGTCCAAG+GGG | + | chr4.2:35812023-35812042 | None:intergenic | 60.0% | |
CACTCCTTCAGCTGTGGCAC+TGG | + | chr4.2:35812763-35812782 | None:intergenic | 60.0% | |
CCATGCCCGAGTCACCTAGA+TGG | - | chr4.2:35811887-35811906 | MS.gene062929:intron | 60.0% | |
CCCTTGGCAACGAGCCATCT+AGG | + | chr4.2:35811904-35811923 | None:intergenic | 60.0% | |
CCGTTGAGGCTTCGAGCTCA+AGG | - | chr4.2:35812516-35812535 | MS.gene062929:intron | 60.0% | |
GGCTTCCCCTAATCGACCCT+TGG | + | chr4.2:35811920-35811939 | None:intergenic | 60.0% | |
GGTGAATAGGGTCACGAGCG+GGG | - | chr4.2:35812557-35812576 | MS.gene062929:intron | 60.0% | |
! | CCATCTAGGTGACTCGGGCA+TGG | + | chr4.2:35811890-35811909 | None:intergenic | 60.0% |
! | CGGGCATTGCAATTGTCGCG+TGG | - | chr4.2:35812646-35812665 | MS.gene062929:intron | 60.0% |
! | CTCGCCAACCATAACGGAGG+GGG | + | chr4.2:35811813-35811832 | None:intergenic | 60.0% |
!! | CCCACCAATGGTGATGGCCT+TGG | + | chr4.2:35812610-35812629 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 35810646 | 35812836 | 35810646 | ID=MS.gene062929 |
chr4.2 | mRNA | 35810646 | 35812836 | 35810646 | ID=MS.gene062929.t1;Parent=MS.gene062929 |
chr4.2 | exon | 35812707 | 35812836 | 35812707 | ID=MS.gene062929.t1.exon1;Parent=MS.gene062929.t1 |
chr4.2 | CDS | 35812707 | 35812836 | 35812707 | ID=cds.MS.gene062929.t1;Parent=MS.gene062929.t1 |
chr4.2 | exon | 35812000 | 35812346 | 35812000 | ID=MS.gene062929.t1.exon2;Parent=MS.gene062929.t1 |
chr4.2 | CDS | 35812000 | 35812346 | 35812000 | ID=cds.MS.gene062929.t1;Parent=MS.gene062929.t1 |
chr4.2 | exon | 35810646 | 35811731 | 35810646 | ID=MS.gene062929.t1.exon3;Parent=MS.gene062929.t1 |
chr4.2 | CDS | 35810646 | 35811731 | 35810646 | ID=cds.MS.gene062929.t1;Parent=MS.gene062929.t1 |
Gene Sequence |
Protein sequence |