Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004000.t1 | XP_003606724.3 | 97.1 | 556 | 16 | 0 | 1 | 556 | 1 | 556 | 4.50E-288 | 1000 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004000.t1 | Q0WWW9 | 77.5 | 494 | 106 | 3 | 68 | 556 | 65 | 558 | 1.0e-208 | 727.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004000.t1 | A0A396I8F5 | 97.1 | 556 | 16 | 0 | 1 | 556 | 1 | 556 | 3.2e-288 | 1000.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004000.t1 | MTR_4g064820 | 95.914 | 465 | 17 | 1 | 1 | 465 | 1 | 463 | 0.0 | 878 |
MS.gene004000.t1 | MTR_4g077740 | 60.861 | 488 | 178 | 3 | 78 | 555 | 17 | 501 | 0.0 | 580 |
MS.gene004000.t1 | MTR_7g005910 | 34.707 | 461 | 261 | 10 | 105 | 551 | 42 | 476 | 1.18e-70 | 235 |
MS.gene004000.t1 | MTR_7g446340 | 31.985 | 519 | 296 | 12 | 51 | 551 | 20 | 499 | 4.06e-70 | 234 |
MS.gene004000.t1 | MTR_6g007340 | 31.985 | 519 | 296 | 12 | 51 | 551 | 20 | 499 | 4.06e-70 | 234 |
MS.gene004000.t1 | MTR_2g013310 | 33.473 | 478 | 277 | 9 | 87 | 551 | 48 | 497 | 5.94e-70 | 234 |
MS.gene004000.t1 | MTR_6g018790 | 31.911 | 539 | 330 | 12 | 18 | 551 | 33 | 539 | 2.37e-67 | 228 |
MS.gene004000.t1 | MTR_1g116660 | 34.934 | 458 | 265 | 8 | 105 | 551 | 44 | 479 | 2.57e-67 | 226 |
MS.gene004000.t1 | MTR_3g084110 | 34.136 | 457 | 268 | 9 | 105 | 550 | 37 | 471 | 6.25e-67 | 225 |
MS.gene004000.t1 | MTR_3g116240 | 32.114 | 492 | 281 | 10 | 87 | 551 | 23 | 488 | 3.73e-66 | 224 |
MS.gene004000.t1 | MTR_2g013310 | 34.709 | 412 | 239 | 7 | 153 | 551 | 30 | 424 | 8.37e-65 | 218 |
MS.gene004000.t1 | MTR_6g088450 | 30.769 | 494 | 290 | 13 | 79 | 546 | 35 | 502 | 1.10e-63 | 217 |
MS.gene004000.t1 | MTR_4g069500 | 31.340 | 485 | 292 | 13 | 88 | 552 | 26 | 489 | 9.54e-63 | 215 |
MS.gene004000.t1 | MTR_4g072030 | 31.340 | 485 | 289 | 12 | 88 | 551 | 23 | 484 | 1.19e-61 | 212 |
MS.gene004000.t1 | MTR_1g116650 | 32.609 | 460 | 262 | 7 | 104 | 551 | 86 | 509 | 5.92e-61 | 210 |
MS.gene004000.t1 | MTR_7g082270 | 33.333 | 489 | 292 | 10 | 67 | 551 | 41 | 499 | 1.46e-60 | 208 |
MS.gene004000.t1 | MTR_4g069500 | 32.458 | 419 | 255 | 8 | 153 | 552 | 30 | 439 | 8.11e-60 | 206 |
MS.gene004000.t1 | MTR_5g075300 | 30.488 | 492 | 313 | 11 | 80 | 556 | 7 | 484 | 2.37e-59 | 205 |
MS.gene004000.t1 | MTR_8g103500 | 32.174 | 460 | 277 | 10 | 108 | 552 | 30 | 469 | 3.03e-58 | 202 |
MS.gene004000.t1 | MTR_7g113960 | 30.995 | 442 | 274 | 9 | 119 | 554 | 42 | 458 | 3.55e-57 | 199 |
MS.gene004000.t1 | MTR_7g113970 | 31.048 | 496 | 297 | 12 | 71 | 551 | 27 | 492 | 1.66e-56 | 197 |
MS.gene004000.t1 | MTR_7g094450 | 30.992 | 484 | 292 | 13 | 79 | 554 | 24 | 473 | 1.91e-55 | 194 |
MS.gene004000.t1 | MTR_8g077890 | 30.266 | 489 | 308 | 11 | 80 | 551 | 7 | 479 | 6.11e-55 | 193 |
MS.gene004000.t1 | MTR_5g020270 | 31.377 | 494 | 289 | 11 | 75 | 551 | 25 | 485 | 1.41e-52 | 187 |
MS.gene004000.t1 | MTR_4g013205 | 29.317 | 498 | 315 | 10 | 67 | 555 | 4 | 473 | 3.44e-52 | 185 |
MS.gene004000.t1 | MTR_7g094110 | 30.021 | 483 | 298 | 12 | 79 | 554 | 26 | 475 | 1.71e-51 | 183 |
MS.gene004000.t1 | MTR_1g104750 | 29.592 | 490 | 295 | 12 | 95 | 556 | 22 | 489 | 4.60e-51 | 182 |
MS.gene004000.t1 | MTR_6g087910 | 31.373 | 510 | 306 | 12 | 64 | 555 | 4 | 487 | 1.78e-50 | 181 |
MS.gene004000.t1 | MTR_4g118610 | 29.191 | 507 | 313 | 13 | 59 | 552 | 11 | 484 | 4.67e-50 | 180 |
MS.gene004000.t1 | MTR_1g022315 | 30.505 | 495 | 299 | 12 | 68 | 551 | 25 | 485 | 8.10e-50 | 179 |
MS.gene004000.t1 | MTR_1g104770 | 29.098 | 488 | 303 | 9 | 94 | 556 | 21 | 490 | 2.01e-49 | 178 |
MS.gene004000.t1 | MTR_1g104780 | 31.315 | 479 | 284 | 11 | 104 | 556 | 30 | 489 | 1.07e-48 | 177 |
MS.gene004000.t1 | MTR_7g082270 | 33.028 | 436 | 258 | 10 | 67 | 498 | 41 | 446 | 2.26e-48 | 175 |
MS.gene004000.t1 | MTR_3g080240 | 29.182 | 538 | 343 | 11 | 28 | 554 | 21 | 531 | 5.12e-48 | 175 |
MS.gene004000.t1 | MTR_5g006070 | 30.185 | 487 | 295 | 14 | 96 | 556 | 22 | 489 | 8.41e-48 | 174 |
MS.gene004000.t1 | MTR_2g020710 | 27.572 | 486 | 310 | 11 | 79 | 554 | 30 | 483 | 1.35e-47 | 173 |
MS.gene004000.t1 | MTR_5g020270 | 31.630 | 411 | 242 | 9 | 154 | 551 | 1 | 385 | 1.59e-47 | 170 |
MS.gene004000.t1 | MTR_0204s0020 | 32.025 | 484 | 274 | 14 | 96 | 550 | 21 | 478 | 1.99e-47 | 172 |
MS.gene004000.t1 | MTR_2g020710 | 28.954 | 411 | 259 | 9 | 152 | 554 | 9 | 394 | 2.58e-47 | 170 |
MS.gene004000.t1 | MTR_8g077310 | 29.697 | 495 | 301 | 13 | 68 | 551 | 24 | 482 | 4.31e-47 | 172 |
MS.gene004000.t1 | MTR_5g077580 | 27.402 | 562 | 274 | 11 | 92 | 552 | 20 | 548 | 4.44e-47 | 173 |
MS.gene004000.t1 | MTR_4g064807 | 100.000 | 81 | 0 | 0 | 476 | 556 | 1 | 81 | 9.44e-47 | 158 |
MS.gene004000.t1 | MTR_1g022315 | 30.807 | 409 | 249 | 9 | 154 | 551 | 1 | 386 | 9.91e-47 | 168 |
MS.gene004000.t1 | MTR_0204s0020 | 31.809 | 481 | 276 | 14 | 96 | 550 | 21 | 475 | 1.43e-46 | 170 |
MS.gene004000.t1 | MTR_8g077300 | 30.947 | 475 | 280 | 12 | 96 | 556 | 39 | 479 | 1.88e-46 | 170 |
MS.gene004000.t1 | MTR_6g087040 | 29.228 | 479 | 296 | 10 | 96 | 550 | 26 | 485 | 1.70e-45 | 167 |
MS.gene004000.t1 | MTR_6g088375 | 29.228 | 479 | 296 | 10 | 96 | 550 | 26 | 485 | 1.70e-45 | 167 |
MS.gene004000.t1 | MTR_5g020270 | 31.441 | 458 | 271 | 11 | 95 | 551 | 49 | 464 | 7.98e-45 | 165 |
MS.gene004000.t1 | MTR_8g077310 | 31.051 | 409 | 247 | 11 | 154 | 551 | 1 | 385 | 1.52e-44 | 162 |
MS.gene004000.t1 | MTR_0009s0370 | 30.021 | 483 | 293 | 11 | 96 | 551 | 21 | 485 | 2.16e-44 | 165 |
MS.gene004000.t1 | MTR_5g006070 | 30.496 | 423 | 262 | 11 | 147 | 556 | 38 | 441 | 7.21e-44 | 162 |
MS.gene004000.t1 | MTR_2g049020 | 33.427 | 356 | 219 | 8 | 92 | 444 | 20 | 360 | 7.66e-44 | 164 |
MS.gene004000.t1 | MTR_2g049020 | 35.000 | 100 | 65 | 0 | 453 | 552 | 452 | 551 | 1.91e-12 | 70.1 |
MS.gene004000.t1 | MTR_2g048720 | 34.349 | 361 | 210 | 10 | 91 | 445 | 19 | 358 | 3.59e-43 | 162 |
MS.gene004000.t1 | MTR_3g074270 | 28.776 | 490 | 300 | 10 | 78 | 550 | 5 | 462 | 1.36e-42 | 159 |
MS.gene004000.t1 | MTR_3g023480 | 28.660 | 485 | 297 | 10 | 96 | 551 | 21 | 485 | 2.22e-42 | 159 |
MS.gene004000.t1 | MTR_0204s0040 | 30.658 | 486 | 278 | 14 | 96 | 550 | 29 | 486 | 5.79e-42 | 158 |
MS.gene004000.t1 | MTR_4g116770 | 30.372 | 484 | 282 | 14 | 96 | 550 | 225 | 682 | 7.30e-42 | 160 |
MS.gene004000.t1 | MTR_4g116790 | 30.785 | 484 | 280 | 14 | 96 | 550 | 27 | 484 | 1.27e-41 | 157 |
MS.gene004000.t1 | MTR_3g007910 | 29.175 | 473 | 276 | 12 | 96 | 550 | 22 | 453 | 2.65e-41 | 155 |
MS.gene004000.t1 | MTR_7g094110 | 28.601 | 479 | 290 | 13 | 79 | 554 | 26 | 455 | 3.23e-41 | 155 |
MS.gene004000.t1 | MTR_7g091690 | 29.622 | 503 | 305 | 12 | 77 | 550 | 2 | 484 | 4.56e-41 | 155 |
MS.gene004000.t1 | MTR_5g041550 | 27.066 | 484 | 308 | 11 | 96 | 552 | 23 | 488 | 7.26e-41 | 155 |
MS.gene004000.t1 | MTR_5g094760 | 29.228 | 479 | 294 | 12 | 96 | 550 | 27 | 484 | 7.70e-41 | 154 |
MS.gene004000.t1 | MTR_8g102860 | 30.361 | 471 | 285 | 11 | 104 | 550 | 34 | 485 | 5.22e-40 | 152 |
MS.gene004000.t1 | MTR_3g074390 | 29.339 | 484 | 296 | 16 | 95 | 552 | 27 | 490 | 2.23e-39 | 150 |
MS.gene004000.t1 | MTR_3g074410 | 27.708 | 480 | 305 | 11 | 96 | 551 | 25 | 486 | 9.68e-39 | 149 |
MS.gene004000.t1 | MTR_1g038630 | 27.235 | 481 | 306 | 8 | 96 | 551 | 23 | 484 | 1.06e-38 | 149 |
MS.gene004000.t1 | MTR_3g093060 | 29.070 | 430 | 274 | 11 | 134 | 550 | 27 | 438 | 1.23e-38 | 147 |
MS.gene004000.t1 | MTR_4g091370 | 28.986 | 483 | 297 | 11 | 96 | 551 | 23 | 486 | 2.77e-38 | 147 |
MS.gene004000.t1 | MTR_3g093010 | 27.273 | 484 | 298 | 14 | 104 | 556 | 30 | 490 | 6.52e-38 | 146 |
MS.gene004000.t1 | MTR_1g038600 | 28.051 | 467 | 302 | 9 | 96 | 551 | 23 | 466 | 2.68e-37 | 144 |
MS.gene004000.t1 | MTR_2g026160 | 31.714 | 350 | 210 | 7 | 105 | 445 | 36 | 365 | 3.68e-37 | 145 |
MS.gene004000.t1 | MTR_2g026160 | 43.810 | 105 | 59 | 0 | 452 | 556 | 454 | 558 | 8.05e-16 | 80.9 |
MS.gene004000.t1 | MTR_3g008160 | 28.074 | 488 | 293 | 12 | 96 | 551 | 23 | 484 | 4.57e-37 | 144 |
MS.gene004000.t1 | MTR_3g008170 | 28.958 | 480 | 302 | 13 | 96 | 552 | 23 | 486 | 9.24e-37 | 143 |
MS.gene004000.t1 | MTR_7g113960 | 31.638 | 354 | 211 | 9 | 119 | 465 | 42 | 371 | 1.63e-36 | 140 |
MS.gene004000.t1 | MTR_5g019870 | 27.214 | 463 | 305 | 10 | 109 | 552 | 28 | 477 | 2.82e-36 | 142 |
MS.gene004000.t1 | MTR_8g102860 | 29.977 | 437 | 276 | 10 | 125 | 550 | 16 | 433 | 6.35e-36 | 140 |
MS.gene004000.t1 | MTR_5g082540 | 26.962 | 497 | 299 | 13 | 97 | 556 | 19 | 488 | 6.74e-36 | 140 |
MS.gene004000.t1 | MTR_4g069500 | 30.195 | 308 | 191 | 6 | 261 | 552 | 1 | 300 | 6.84e-35 | 134 |
MS.gene004000.t1 | MTR_4g090600 | 29.938 | 481 | 288 | 13 | 104 | 556 | 31 | 490 | 9.66e-34 | 134 |
MS.gene004000.t1 | MTR_7g113970 | 29.665 | 418 | 247 | 13 | 71 | 470 | 27 | 415 | 2.16e-33 | 132 |
MS.gene004000.t1 | MTR_3g008160 | 28.037 | 428 | 268 | 9 | 141 | 551 | 31 | 435 | 2.17e-33 | 133 |
MS.gene004000.t1 | MTR_4g118610 | 27.586 | 435 | 270 | 12 | 59 | 480 | 11 | 413 | 2.27e-33 | 132 |
MS.gene004000.t1 | MTR_2g020710 | 26.098 | 410 | 266 | 8 | 79 | 480 | 30 | 410 | 5.71e-33 | 131 |
MS.gene004000.t1 | MTR_2g020710 | 26.161 | 409 | 265 | 8 | 79 | 479 | 30 | 409 | 1.18e-32 | 130 |
MS.gene004000.t1 | MTR_8g077310 | 29.024 | 379 | 232 | 9 | 68 | 444 | 24 | 367 | 8.01e-30 | 122 |
MS.gene004000.t1 | MTR_4g116790 | 30.704 | 355 | 200 | 11 | 96 | 429 | 27 | 356 | 1.61e-29 | 120 |
MS.gene004000.t1 | MTR_2g026140 | 29.799 | 349 | 204 | 8 | 106 | 445 | 34 | 350 | 5.07e-27 | 115 |
MS.gene004000.t1 | MTR_2g020710 | 26.344 | 372 | 239 | 9 | 79 | 446 | 30 | 370 | 5.94e-26 | 110 |
MS.gene004000.t1 | MTR_3g074380 | 29.363 | 361 | 222 | 13 | 95 | 441 | 25 | 366 | 1.08e-25 | 109 |
MS.gene004000.t1 | MTR_3g116060 | 35.885 | 209 | 123 | 5 | 104 | 308 | 12 | 213 | 1.36e-21 | 99.4 |
MS.gene004000.t1 | MTR_3g116060 | 31.839 | 223 | 137 | 6 | 342 | 550 | 492 | 713 | 5.69e-18 | 88.2 |
MS.gene004000.t1 | MTR_5g024740 | 29.758 | 289 | 183 | 10 | 96 | 377 | 4 | 279 | 6.35e-19 | 90.9 |
MS.gene004000.t1 | MTR_5g024740 | 29.952 | 207 | 133 | 3 | 356 | 550 | 499 | 705 | 1.61e-14 | 77.0 |
MS.gene004000.t1 | MTR_5g044910 | 30.496 | 282 | 171 | 11 | 105 | 377 | 13 | 278 | 2.21e-18 | 89.4 |
MS.gene004000.t1 | MTR_5g044910 | 28.846 | 208 | 134 | 3 | 356 | 550 | 497 | 703 | 4.80e-13 | 72.4 |
MS.gene004000.t1 | MTR_3g074340 | 28.197 | 305 | 189 | 8 | 258 | 550 | 30 | 316 | 3.57e-18 | 86.3 |
MS.gene004000.t1 | MTR_3g074370 | 27.213 | 305 | 192 | 8 | 258 | 550 | 30 | 316 | 4.21e-18 | 86.3 |
MS.gene004000.t1 | MTR_3g118530 | 35.071 | 211 | 125 | 6 | 143 | 345 | 46 | 252 | 5.58e-18 | 88.2 |
MS.gene004000.t1 | MTR_3g118530 | 30.594 | 219 | 138 | 5 | 345 | 550 | 506 | 723 | 1.02e-17 | 87.4 |
MS.gene004000.t1 | MTR_3g118530 | 35.071 | 211 | 125 | 6 | 143 | 345 | 46 | 252 | 8.63e-18 | 87.4 |
MS.gene004000.t1 | MTR_3g074320 | 29.180 | 305 | 186 | 9 | 258 | 550 | 30 | 316 | 1.27e-17 | 84.7 |
MS.gene004000.t1 | MTR_8g073100 | 31.884 | 207 | 129 | 3 | 356 | 550 | 495 | 701 | 1.04e-16 | 84.0 |
MS.gene004000.t1 | MTR_8g073100 | 32.804 | 189 | 120 | 4 | 104 | 290 | 12 | 195 | 1.12e-14 | 77.8 |
MS.gene004000.t1 | MTR_3g074400 | 23.516 | 438 | 258 | 15 | 141 | 548 | 30 | 420 | 2.67e-14 | 75.5 |
MS.gene004000.t1 | MTR_5g096000 | 32.639 | 144 | 89 | 3 | 104 | 246 | 30 | 166 | 1.45e-13 | 72.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004000.t1 | AT5G59250 | 71.978 | 546 | 147 | 4 | 16 | 556 | 14 | 558 | 0.0 | 764 |
MS.gene004000.t1 | AT5G17010 | 61.569 | 497 | 183 | 4 | 62 | 555 | 12 | 503 | 0.0 | 580 |
MS.gene004000.t1 | AT5G17010 | 61.569 | 497 | 183 | 4 | 62 | 555 | 12 | 503 | 0.0 | 580 |
MS.gene004000.t1 | AT5G17010 | 61.569 | 497 | 183 | 4 | 62 | 555 | 12 | 503 | 0.0 | 580 |
MS.gene004000.t1 | AT3G03090 | 60.600 | 467 | 181 | 2 | 89 | 555 | 40 | 503 | 0.0 | 559 |
MS.gene004000.t1 | AT5G17010 | 50.531 | 471 | 162 | 5 | 89 | 555 | 37 | 440 | 1.07e-139 | 412 |
MS.gene004000.t1 | AT2G20780 | 31.936 | 501 | 306 | 10 | 60 | 551 | 23 | 497 | 1.30e-68 | 231 |
MS.gene004000.t1 | AT2G43330 | 35.065 | 462 | 268 | 9 | 101 | 551 | 36 | 476 | 4.97e-64 | 218 |
MS.gene004000.t1 | AT5G27360 | 30.616 | 552 | 338 | 14 | 15 | 556 | 2 | 518 | 1.53e-63 | 217 |
MS.gene004000.t1 | AT5G27360 | 31.873 | 502 | 294 | 11 | 61 | 556 | 11 | 470 | 3.84e-63 | 215 |
MS.gene004000.t1 | AT3G18830 | 30.297 | 472 | 291 | 9 | 101 | 551 | 41 | 495 | 2.71e-62 | 214 |
MS.gene004000.t1 | AT2G16120 | 30.879 | 489 | 307 | 8 | 80 | 552 | 14 | 487 | 1.07e-61 | 212 |
MS.gene004000.t1 | AT2G16130 | 30.648 | 509 | 314 | 9 | 60 | 552 | 2 | 487 | 1.08e-61 | 212 |
MS.gene004000.t1 | AT2G20780 | 34.559 | 408 | 243 | 8 | 153 | 551 | 47 | 439 | 4.27e-61 | 209 |
MS.gene004000.t1 | AT5G16150 | 34.068 | 499 | 293 | 13 | 60 | 551 | 70 | 539 | 1.05e-60 | 210 |
MS.gene004000.t1 | AT5G16150 | 34.068 | 499 | 293 | 13 | 60 | 551 | 70 | 539 | 1.05e-60 | 210 |
MS.gene004000.t1 | AT5G16150 | 34.068 | 499 | 293 | 13 | 60 | 551 | 70 | 539 | 1.05e-60 | 210 |
MS.gene004000.t1 | AT4G36670 | 33.902 | 469 | 266 | 14 | 108 | 552 | 29 | 477 | 8.55e-60 | 206 |
MS.gene004000.t1 | AT5G27350 | 31.723 | 476 | 288 | 9 | 86 | 555 | 21 | 465 | 2.64e-59 | 204 |
MS.gene004000.t1 | AT3G05165 | 30.169 | 474 | 293 | 9 | 87 | 554 | 22 | 463 | 2.17e-55 | 194 |
MS.gene004000.t1 | AT3G05165 | 30.169 | 474 | 293 | 9 | 87 | 554 | 22 | 463 | 2.17e-55 | 194 |
MS.gene004000.t1 | AT3G05165 | 30.169 | 474 | 293 | 9 | 87 | 554 | 22 | 463 | 2.17e-55 | 194 |
MS.gene004000.t1 | AT2G18480 | 30.444 | 473 | 272 | 10 | 110 | 552 | 36 | 481 | 6.27e-55 | 193 |
MS.gene004000.t1 | AT5G27360 | 33.592 | 387 | 227 | 9 | 176 | 556 | 4 | 366 | 8.38e-55 | 189 |
MS.gene004000.t1 | AT5G27360 | 33.592 | 387 | 227 | 9 | 176 | 556 | 4 | 366 | 8.38e-55 | 189 |
MS.gene004000.t1 | AT1G79820 | 29.400 | 517 | 322 | 11 | 52 | 555 | 5 | 491 | 3.94e-53 | 188 |
MS.gene004000.t1 | AT1G79820 | 29.400 | 517 | 322 | 11 | 52 | 555 | 5 | 491 | 3.94e-53 | 188 |
MS.gene004000.t1 | AT3G05150 | 30.561 | 481 | 295 | 11 | 82 | 555 | 22 | 470 | 1.79e-52 | 186 |
MS.gene004000.t1 | AT3G05150 | 30.561 | 481 | 295 | 11 | 82 | 555 | 22 | 470 | 1.79e-52 | 186 |
MS.gene004000.t1 | AT3G05150 | 30.561 | 481 | 295 | 11 | 82 | 555 | 22 | 470 | 1.93e-52 | 186 |
MS.gene004000.t1 | AT3G05160 | 30.169 | 474 | 293 | 10 | 87 | 554 | 13 | 454 | 8.61e-52 | 184 |
MS.gene004000.t1 | AT3G05160 | 31.051 | 409 | 252 | 7 | 152 | 554 | 21 | 405 | 9.16e-52 | 182 |
MS.gene004000.t1 | AT3G05160 | 31.051 | 409 | 252 | 7 | 152 | 554 | 21 | 405 | 9.16e-52 | 182 |
MS.gene004000.t1 | AT1G54730 | 31.648 | 455 | 274 | 10 | 106 | 554 | 42 | 465 | 8.47e-51 | 181 |
MS.gene004000.t1 | AT5G26340 | 29.039 | 489 | 298 | 10 | 96 | 556 | 23 | 490 | 2.79e-49 | 179 |
MS.gene004000.t1 | AT1G08930 | 29.387 | 473 | 297 | 10 | 86 | 552 | 48 | 489 | 5.28e-49 | 177 |
MS.gene004000.t1 | AT1G08930 | 29.387 | 473 | 297 | 10 | 86 | 552 | 48 | 489 | 5.28e-49 | 177 |
MS.gene004000.t1 | AT5G18840 | 30.580 | 448 | 275 | 14 | 119 | 556 | 59 | 480 | 1.05e-48 | 176 |
MS.gene004000.t1 | AT1G67300 | 29.240 | 513 | 326 | 10 | 52 | 555 | 6 | 490 | 4.36e-48 | 174 |
MS.gene004000.t1 | AT1G67300 | 29.240 | 513 | 326 | 10 | 52 | 555 | 6 | 490 | 4.36e-48 | 174 |
MS.gene004000.t1 | AT2G48020 | 30.266 | 413 | 256 | 10 | 148 | 552 | 71 | 459 | 5.24e-48 | 174 |
MS.gene004000.t1 | AT2G48020 | 30.266 | 413 | 256 | 10 | 148 | 552 | 71 | 459 | 5.24e-48 | 174 |
MS.gene004000.t1 | AT1G67300 | 29.572 | 514 | 324 | 11 | 52 | 555 | 6 | 491 | 1.87e-47 | 173 |
MS.gene004000.t1 | AT1G05030 | 30.591 | 474 | 291 | 10 | 89 | 551 | 68 | 514 | 2.18e-47 | 173 |
MS.gene004000.t1 | AT1G75220 | 29.297 | 512 | 306 | 12 | 60 | 552 | 10 | 484 | 1.24e-46 | 170 |
MS.gene004000.t1 | AT1G50310 | 30.642 | 483 | 286 | 15 | 96 | 550 | 25 | 486 | 1.88e-46 | 171 |
MS.gene004000.t1 | AT5G23270 | 30.691 | 492 | 293 | 14 | 87 | 550 | 15 | 486 | 1.67e-45 | 168 |
MS.gene004000.t1 | AT3G05165 | 28.829 | 444 | 278 | 9 | 87 | 524 | 22 | 433 | 2.67e-45 | 167 |
MS.gene004000.t1 | AT4G02050 | 29.545 | 484 | 290 | 11 | 94 | 550 | 25 | 484 | 4.46e-45 | 167 |
MS.gene004000.t1 | AT4G02050 | 29.545 | 484 | 290 | 11 | 94 | 550 | 25 | 484 | 4.46e-45 | 167 |
MS.gene004000.t1 | AT1G19450 | 29.572 | 514 | 300 | 15 | 61 | 552 | 12 | 485 | 5.64e-45 | 166 |
MS.gene004000.t1 | AT3G19940 | 30.041 | 486 | 284 | 16 | 96 | 550 | 25 | 485 | 4.47e-44 | 164 |
MS.gene004000.t1 | AT3G05165 | 28.868 | 433 | 271 | 8 | 87 | 513 | 22 | 423 | 5.83e-44 | 162 |
MS.gene004000.t1 | AT3G05165 | 28.868 | 433 | 271 | 8 | 87 | 513 | 22 | 423 | 5.83e-44 | 162 |
MS.gene004000.t1 | AT1G08900 | 29.197 | 411 | 261 | 8 | 152 | 556 | 32 | 418 | 1.03e-43 | 161 |
MS.gene004000.t1 | AT1G08900 | 28.764 | 445 | 286 | 9 | 119 | 556 | 40 | 460 | 1.50e-43 | 161 |
MS.gene004000.t1 | AT1G08900 | 28.764 | 445 | 286 | 9 | 119 | 556 | 40 | 460 | 1.50e-43 | 161 |
MS.gene004000.t1 | AT1G08900 | 29.197 | 411 | 261 | 8 | 152 | 556 | 66 | 452 | 1.78e-43 | 161 |
MS.gene004000.t1 | AT5G27360 | 31.450 | 407 | 243 | 9 | 86 | 486 | 25 | 401 | 2.41e-43 | 160 |
MS.gene004000.t1 | AT3G05155 | 28.319 | 452 | 281 | 10 | 110 | 553 | 41 | 457 | 2.44e-43 | 160 |
MS.gene004000.t1 | AT1G05030 | 30.404 | 421 | 264 | 7 | 138 | 551 | 64 | 462 | 2.47e-43 | 161 |
MS.gene004000.t1 | AT1G54730 | 29.581 | 453 | 265 | 10 | 106 | 554 | 42 | 444 | 3.66e-43 | 160 |
MS.gene004000.t1 | AT1G79820 | 28.788 | 462 | 282 | 11 | 52 | 498 | 5 | 434 | 7.83e-43 | 159 |
MS.gene004000.t1 | AT1G07340 | 29.774 | 487 | 296 | 15 | 95 | 556 | 22 | 487 | 1.63e-42 | 159 |
MS.gene004000.t1 | AT1G77210 | 30.266 | 489 | 282 | 13 | 94 | 550 | 24 | 485 | 2.47e-42 | 159 |
MS.gene004000.t1 | AT1G77210 | 30.266 | 489 | 282 | 13 | 94 | 550 | 24 | 485 | 2.47e-42 | 159 |
MS.gene004000.t1 | AT1G54730 | 30.843 | 415 | 251 | 9 | 106 | 514 | 42 | 426 | 2.72e-42 | 157 |
MS.gene004000.t1 | AT1G08920 | 28.538 | 424 | 273 | 8 | 137 | 554 | 66 | 465 | 5.78e-42 | 157 |
MS.gene004000.t1 | AT5G26250 | 28.994 | 507 | 307 | 14 | 76 | 556 | 6 | 485 | 1.91e-41 | 156 |
MS.gene004000.t1 | AT3G05960 | 31.315 | 479 | 280 | 17 | 104 | 556 | 29 | 484 | 2.01e-41 | 156 |
MS.gene004000.t1 | AT4G21480 | 28.274 | 481 | 301 | 11 | 96 | 551 | 23 | 484 | 8.22e-41 | 154 |
MS.gene004000.t1 | AT4G04750 | 28.623 | 552 | 324 | 17 | 19 | 552 | 14 | 513 | 1.77e-40 | 154 |
MS.gene004000.t1 | AT1G11260 | 27.801 | 482 | 302 | 12 | 96 | 550 | 23 | 485 | 3.10e-40 | 153 |
MS.gene004000.t1 | AT4G04750 | 29.400 | 500 | 295 | 14 | 71 | 552 | 10 | 469 | 3.46e-40 | 152 |
MS.gene004000.t1 | AT4G04750 | 29.400 | 500 | 295 | 14 | 71 | 552 | 10 | 469 | 3.46e-40 | 152 |
MS.gene004000.t1 | AT1G08920 | 28.074 | 431 | 273 | 9 | 137 | 554 | 66 | 472 | 6.21e-40 | 152 |
MS.gene004000.t1 | AT1G67300 | 28.540 | 452 | 286 | 10 | 52 | 494 | 6 | 429 | 9.04e-40 | 150 |
MS.gene004000.t1 | AT1G67300 | 28.540 | 452 | 286 | 10 | 52 | 494 | 6 | 429 | 9.04e-40 | 150 |
MS.gene004000.t1 | AT1G30220 | 31.622 | 370 | 235 | 6 | 78 | 444 | 8 | 362 | 9.52e-40 | 153 |
MS.gene004000.t1 | AT1G30220 | 41.237 | 97 | 53 | 1 | 459 | 551 | 457 | 553 | 3.95e-14 | 75.9 |
MS.gene004000.t1 | AT1G67300 | 28.540 | 452 | 286 | 10 | 52 | 494 | 6 | 429 | 1.17e-39 | 150 |
MS.gene004000.t1 | AT1G67300 | 28.540 | 452 | 286 | 10 | 52 | 494 | 6 | 429 | 1.17e-39 | 150 |
MS.gene004000.t1 | AT1G08890 | 30.087 | 462 | 282 | 14 | 107 | 554 | 26 | 460 | 1.18e-39 | 150 |
MS.gene004000.t1 | AT1G79820 | 28.155 | 515 | 283 | 11 | 52 | 555 | 5 | 443 | 2.90e-39 | 149 |
MS.gene004000.t1 | AT2G35740 | 33.238 | 349 | 206 | 8 | 105 | 445 | 35 | 364 | 5.09e-39 | 150 |
MS.gene004000.t1 | AT2G35740 | 42.857 | 105 | 57 | 1 | 447 | 551 | 455 | 556 | 5.96e-14 | 75.1 |
MS.gene004000.t1 | AT4G04760 | 29.221 | 462 | 293 | 10 | 97 | 552 | 32 | 465 | 6.11e-39 | 149 |
MS.gene004000.t1 | AT3G05400 | 27.803 | 446 | 289 | 9 | 112 | 551 | 38 | 456 | 6.12e-39 | 149 |
MS.gene004000.t1 | AT1G34580 | 28.827 | 503 | 303 | 16 | 76 | 550 | 12 | 487 | 1.52e-38 | 148 |
MS.gene004000.t1 | AT3G19930 | 27.637 | 474 | 297 | 13 | 104 | 551 | 31 | 484 | 3.28e-38 | 147 |
MS.gene004000.t1 | AT3G19930 | 27.637 | 474 | 297 | 13 | 104 | 551 | 31 | 484 | 3.28e-38 | 147 |
MS.gene004000.t1 | AT4G04760 | 30.024 | 423 | 269 | 9 | 136 | 552 | 5 | 406 | 4.15e-38 | 145 |
MS.gene004000.t1 | AT4G04760 | 28.696 | 460 | 295 | 11 | 97 | 552 | 32 | 462 | 3.81e-36 | 141 |
MS.gene004000.t1 | AT1G54730 | 31.496 | 381 | 225 | 9 | 106 | 480 | 42 | 392 | 8.48e-36 | 139 |
MS.gene004000.t1 | AT1G54730 | 31.496 | 381 | 225 | 9 | 106 | 480 | 42 | 392 | 8.48e-36 | 139 |
MS.gene004000.t1 | AT1G34580 | 29.412 | 425 | 268 | 12 | 141 | 550 | 30 | 437 | 4.38e-35 | 137 |
MS.gene004000.t1 | AT3G05400 | 26.906 | 446 | 273 | 10 | 112 | 551 | 38 | 436 | 5.45e-35 | 137 |
MS.gene004000.t1 | AT3G20460 | 27.745 | 501 | 313 | 13 | 69 | 556 | 24 | 488 | 6.59e-35 | 137 |
MS.gene004000.t1 | AT1G54730 | 28.571 | 413 | 242 | 9 | 106 | 514 | 42 | 405 | 7.83e-35 | 136 |
MS.gene004000.t1 | AT4G16480 | 30.747 | 348 | 214 | 7 | 105 | 444 | 36 | 364 | 5.79e-34 | 136 |
MS.gene004000.t1 | AT4G16480 | 42.857 | 105 | 57 | 1 | 447 | 551 | 456 | 557 | 2.99e-15 | 79.3 |
MS.gene004000.t1 | AT4G16480 | 30.747 | 348 | 214 | 7 | 105 | 444 | 36 | 364 | 5.79e-34 | 136 |
MS.gene004000.t1 | AT4G16480 | 42.857 | 105 | 57 | 1 | 447 | 551 | 456 | 557 | 2.99e-15 | 79.3 |
MS.gene004000.t1 | AT4G16480 | 30.747 | 348 | 214 | 7 | 105 | 444 | 36 | 364 | 5.79e-34 | 136 |
MS.gene004000.t1 | AT4G16480 | 42.857 | 105 | 57 | 1 | 447 | 551 | 456 | 557 | 2.99e-15 | 79.3 |
MS.gene004000.t1 | AT1G08920 | 27.083 | 384 | 251 | 7 | 137 | 514 | 66 | 426 | 8.63e-33 | 131 |
MS.gene004000.t1 | AT5G61520 | 27.178 | 482 | 306 | 12 | 96 | 550 | 24 | 487 | 4.21e-32 | 130 |
MS.gene004000.t1 | AT1G08900 | 27.295 | 403 | 263 | 8 | 119 | 514 | 40 | 419 | 8.06e-32 | 128 |
MS.gene004000.t1 | AT1G54730 | 31.988 | 322 | 189 | 7 | 106 | 427 | 42 | 333 | 3.93e-31 | 124 |
MS.gene004000.t1 | AT1G77210 | 32.410 | 361 | 198 | 12 | 209 | 550 | 3 | 336 | 3.71e-30 | 121 |
MS.gene004000.t1 | AT1G50310 | 29.972 | 357 | 214 | 13 | 209 | 550 | 8 | 343 | 3.73e-29 | 119 |
MS.gene004000.t1 | AT1G54730 | 29.024 | 379 | 216 | 9 | 106 | 480 | 42 | 371 | 1.57e-28 | 117 |
MS.gene004000.t1 | AT5G61520 | 27.187 | 423 | 276 | 10 | 137 | 550 | 40 | 439 | 1.64e-28 | 119 |
MS.gene004000.t1 | AT3G05155 | 28.616 | 318 | 194 | 7 | 110 | 427 | 41 | 325 | 1.12e-26 | 111 |
MS.gene004000.t1 | AT2G48020 | 27.717 | 368 | 231 | 11 | 81 | 445 | 14 | 349 | 3.73e-26 | 110 |
MS.gene004000.t1 | AT1G54730 | 30.519 | 308 | 179 | 7 | 106 | 413 | 42 | 314 | 5.37e-26 | 109 |
MS.gene004000.t1 | AT1G54730 | 30.519 | 308 | 179 | 7 | 106 | 413 | 42 | 314 | 5.37e-26 | 109 |
MS.gene004000.t1 | AT1G79820 | 28.000 | 375 | 199 | 5 | 184 | 555 | 75 | 381 | 6.55e-26 | 110 |
MS.gene004000.t1 | AT2G48020 | 27.954 | 347 | 219 | 9 | 81 | 427 | 14 | 329 | 9.99e-26 | 108 |
MS.gene004000.t1 | AT3G51490 | 34.348 | 230 | 121 | 6 | 95 | 315 | 3 | 211 | 3.68e-22 | 101 |
MS.gene004000.t1 | AT3G51490 | 29.536 | 237 | 152 | 5 | 329 | 550 | 472 | 708 | 1.43e-17 | 87.0 |
MS.gene004000.t1 | AT3G51490 | 35.426 | 223 | 128 | 6 | 95 | 315 | 3 | 211 | 3.93e-22 | 101 |
MS.gene004000.t1 | AT3G51490 | 30.612 | 245 | 147 | 6 | 329 | 550 | 472 | 716 | 3.04e-20 | 95.1 |
MS.gene004000.t1 | AT1G20840 | 32.443 | 262 | 156 | 9 | 104 | 358 | 12 | 259 | 4.75e-22 | 100 |
MS.gene004000.t1 | AT1G20840 | 29.954 | 217 | 120 | 4 | 356 | 550 | 509 | 715 | 1.45e-17 | 87.0 |
MS.gene004000.t1 | AT1G20840 | 32.443 | 262 | 156 | 9 | 104 | 358 | 12 | 259 | 4.75e-22 | 100 |
MS.gene004000.t1 | AT1G20840 | 29.954 | 217 | 120 | 4 | 356 | 550 | 509 | 715 | 1.45e-17 | 87.0 |
MS.gene004000.t1 | AT4G35300 | 36.364 | 209 | 120 | 5 | 106 | 308 | 14 | 215 | 1.28e-20 | 96.3 |
MS.gene004000.t1 | AT4G35300 | 28.926 | 242 | 159 | 4 | 322 | 550 | 471 | 712 | 1.40e-18 | 90.1 |
MS.gene004000.t1 | AT4G35300 | 36.364 | 209 | 120 | 5 | 106 | 308 | 14 | 215 | 1.28e-20 | 96.3 |
MS.gene004000.t1 | AT4G35300 | 28.926 | 242 | 159 | 4 | 322 | 550 | 471 | 712 | 1.40e-18 | 90.1 |
MS.gene004000.t1 | AT4G35300 | 36.364 | 209 | 120 | 5 | 106 | 308 | 14 | 215 | 1.28e-20 | 96.3 |
MS.gene004000.t1 | AT4G35300 | 28.926 | 242 | 159 | 4 | 322 | 550 | 471 | 712 | 1.40e-18 | 90.1 |
MS.gene004000.t1 | AT4G35300 | 36.364 | 209 | 120 | 5 | 106 | 308 | 14 | 215 | 1.32e-20 | 96.3 |
MS.gene004000.t1 | AT4G35300 | 28.926 | 242 | 159 | 4 | 322 | 550 | 481 | 722 | 1.25e-18 | 90.1 |
MS.gene004000.t1 | AT4G35300 | 36.364 | 209 | 120 | 5 | 106 | 308 | 14 | 215 | 1.32e-20 | 96.3 |
MS.gene004000.t1 | AT4G35300 | 28.926 | 242 | 159 | 4 | 322 | 550 | 481 | 722 | 1.25e-18 | 90.1 |
MS.gene004000.t1 | AT4G35300 | 36.364 | 209 | 120 | 5 | 106 | 308 | 14 | 215 | 1.32e-20 | 96.3 |
MS.gene004000.t1 | AT4G35300 | 28.926 | 242 | 159 | 4 | 322 | 550 | 481 | 722 | 1.25e-18 | 90.1 |
MS.gene004000.t1 | AT4G35300 | 36.364 | 209 | 120 | 5 | 106 | 308 | 14 | 215 | 1.32e-20 | 96.3 |
MS.gene004000.t1 | AT4G35300 | 28.926 | 242 | 159 | 4 | 322 | 550 | 481 | 722 | 1.25e-18 | 90.1 |
MS.gene004000.t1 | AT4G35300 | 36.364 | 209 | 120 | 5 | 106 | 308 | 14 | 215 | 1.32e-20 | 96.3 |
MS.gene004000.t1 | AT4G35300 | 28.926 | 242 | 159 | 4 | 322 | 550 | 481 | 722 | 1.25e-18 | 90.1 |
MS.gene004000.t1 | AT4G35300 | 36.364 | 209 | 120 | 5 | 106 | 308 | 14 | 215 | 1.32e-20 | 96.3 |
MS.gene004000.t1 | AT4G35300 | 28.926 | 242 | 159 | 4 | 322 | 550 | 481 | 722 | 1.25e-18 | 90.1 |
MS.gene004000.t1 | AT4G35300 | 36.364 | 209 | 120 | 5 | 106 | 308 | 14 | 215 | 1.32e-20 | 96.3 |
MS.gene004000.t1 | AT4G35300 | 28.926 | 242 | 159 | 4 | 322 | 550 | 481 | 722 | 1.25e-18 | 90.1 |
MS.gene004000.t1 | AT3G51490 | 30.612 | 245 | 147 | 6 | 329 | 550 | 422 | 666 | 2.93e-20 | 95.1 |
MS.gene004000.t1 | AT3G51490 | 37.870 | 169 | 94 | 4 | 149 | 315 | 2 | 161 | 1.21e-18 | 90.1 |
MS.gene004000.t1 | AT4G35300 | 29.339 | 242 | 158 | 4 | 322 | 550 | 284 | 525 | 1.69e-18 | 89.4 |
Find 152 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCTGTCACTTCAAGATTT+TGG | 0.110124 | 4.3:-39312836 | None:intergenic |
TCCCTCTATGGGGCTCTTCT+TGG | 0.227190 | 4.3:+39306669 | MS.gene004000:CDS |
GCATTGGGTGGCTTGCTATT+TGG | 0.229582 | 4.3:+39306339 | MS.gene004000:CDS |
GAGTTTCTTAGAGGTGTTTC+AGG | 0.231232 | 4.3:+39307688 | MS.gene004000:CDS |
TGGCGGAAAATGATTGTTTA+TGG | 0.235616 | 4.3:-39305022 | None:intergenic |
TTAGCAGGAAGGCTGCTTTA+TGG | 0.247331 | 4.3:+39307092 | MS.gene004000:CDS |
CTTCATCGTCTTGGGGATTC+TGG | 0.254886 | 4.3:+39307286 | MS.gene004000:CDS |
GGCTGCCAATTGTTGCTGTT+GGG | 0.261289 | 4.3:+39308418 | MS.gene004000:CDS |
TTGAATTCTTTACTCTTTGA+TGG | 0.263452 | 4.3:-39304951 | None:intergenic |
TTGCTATTTGGTTATGATAT+TGG | 0.265731 | 4.3:+39306351 | MS.gene004000:CDS |
TGCTCCACTTGCTGTGTTAA+TGG | 0.274481 | 4.3:+39307454 | MS.gene004000:CDS |
AGCAACCACCGAGGAGATTC+GGG | 0.294580 | 4.3:-39307497 | None:intergenic |
TTTGAATTGCAGATATCATT+TGG | 0.297753 | 4.3:+39312457 | MS.gene004000:intron |
GCTAAAGTTTCAGTTGTTAT+TGG | 0.319773 | 4.3:+39308078 | MS.gene004000:CDS |
AATCTGAAAGCATTCGTAAT+TGG | 0.324107 | 4.3:+39307716 | MS.gene004000:CDS |
AAAGAACTCTTCATCGTCTT+GGG | 0.324920 | 4.3:+39307278 | MS.gene004000:CDS |
GTCCTAAAAGTGGACGATTT+GGG | 0.331656 | 4.3:+39308220 | MS.gene004000:CDS |
TGTCCTAAAAGTGGACGATT+TGG | 0.336456 | 4.3:+39308219 | MS.gene004000:CDS |
GGGCTGCCAATTGTTGCTGT+TGG | 0.358412 | 4.3:+39308417 | MS.gene004000:CDS |
TAGGTCAGTGGTTCCCTCTA+TGG | 0.360177 | 4.3:+39306657 | MS.gene004000:intron |
AAGCAACCACCGAGGAGATT+CGG | 0.364539 | 4.3:-39307498 | None:intergenic |
CTAATGCAATGGCCGCAAAA+AGG | 0.369183 | 4.3:-39312747 | None:intergenic |
TTTGCAATTGCTGATTTCAT+TGG | 0.369315 | 4.3:+39306705 | MS.gene004000:CDS |
TTATGCAGGTCCCATTCTTC+AGG | 0.371687 | 4.3:+39307930 | MS.gene004000:CDS |
CTTTGCATTCTCACCATTGA+AGG | 0.377650 | 4.3:+39312585 | MS.gene004000:CDS |
CTGCTTTATGGACTTGGTAT+AGG | 0.378257 | 4.3:+39307104 | MS.gene004000:CDS |
TCTGCTTATTATAAATTTCT+CGG | 0.392006 | 4.3:+39308393 | MS.gene004000:CDS |
CAAGTTTCTGCAATGTATAA+AGG | 0.395816 | 4.3:-39307221 | None:intergenic |
AGGTCAGTGGTTCCCTCTAT+GGG | 0.396820 | 4.3:+39306658 | MS.gene004000:intron |
GATACCATCAGCCAACTTAT+CGG | 0.403507 | 4.3:-39312481 | None:intergenic |
TTGAATTGCAGATATCATTT+GGG | 0.403806 | 4.3:+39312458 | MS.gene004000:intron |
GGGAGAAGACCTCTGCTGAT+TGG | 0.408128 | 4.3:+39308241 | MS.gene004000:CDS |
ATTACGAATGCTTTCAGATT+GGG | 0.409084 | 4.3:-39307713 | None:intergenic |
CACTACCAAGTACATACAAC+AGG | 0.412932 | 4.3:-39307034 | None:intergenic |
ACAATTAAGTACCTGAAGAA+TGG | 0.413009 | 4.3:-39307941 | None:intergenic |
ATTCCACTGCAGGAGTATCT+TGG | 0.414752 | 4.3:+39312706 | MS.gene004000:intron |
AAAAGAACTCTTCATCGTCT+TGG | 0.415813 | 4.3:+39307277 | MS.gene004000:CDS |
TTGTTTCCCTGGGCAAACTA+AGG | 0.416488 | 4.3:+39307573 | MS.gene004000:CDS |
GCTCCACTTGCTGTGTTAAT+GGG | 0.419247 | 4.3:+39307455 | MS.gene004000:CDS |
GGAAGGCTGCTTTATGGACT+TGG | 0.423684 | 4.3:+39307098 | MS.gene004000:CDS |
TTCCATTCAGCTTGGTCTTG+TGG | 0.424172 | 4.3:+39306532 | MS.gene004000:CDS |
ATCCGAGGCGAGTTTCTTAG+AGG | 0.426527 | 4.3:+39307679 | MS.gene004000:CDS |
AAGCTGAATGGAAGAAAGAT+TGG | 0.431812 | 4.3:-39306522 | None:intergenic |
GAACTTGGTGTTCTCTTAGC+AGG | 0.432287 | 4.3:+39307077 | MS.gene004000:CDS |
AAACTAAGGGGCCGGCCACT+TGG | 0.434562 | 4.3:+39307587 | MS.gene004000:CDS |
GCCGGCCCCTTAGTTTGCCC+AGG | 0.434700 | 4.3:-39307580 | None:intergenic |
ACATAATTCCAATAGATAAC+AGG | 0.438031 | 4.3:+39307889 | MS.gene004000:intron |
TTATGGACTTGGTATAGGTC+TGG | 0.452748 | 4.3:+39307109 | MS.gene004000:CDS |
GGAAAAGGCAATTGTTTCCC+TGG | 0.453254 | 4.3:+39307562 | MS.gene004000:CDS |
AACAGCATTGGCAGCGAAGT+TGG | 0.454377 | 4.3:-39312557 | None:intergenic |
AATTACGAATGCTTTCAGAT+TGG | 0.457522 | 4.3:-39307714 | None:intergenic |
GGGGCTAGTATTATTTCAAC+AGG | 0.459642 | 4.3:+39307742 | MS.gene004000:CDS |
AGTTGTTATTGGCTTATTCA+AGG | 0.462352 | 4.3:+39308089 | MS.gene004000:CDS |
AACGCCCCAACAGCAACAAT+TGG | 0.464360 | 4.3:-39308423 | None:intergenic |
CTGAGCTTAGCGGTGTCGCT+TGG | 0.469539 | 4.3:+39306498 | MS.gene004000:CDS |
CAATTAAGTACCTGAAGAAT+GGG | 0.470930 | 4.3:-39307940 | None:intergenic |
GCTAAGAGAACACCAAGTTC+TGG | 0.473041 | 4.3:-39307074 | None:intergenic |
AATAGCAAGCCACCCAATGC+AGG | 0.473802 | 4.3:-39306336 | None:intergenic |
CTCAAAGCCGTACAAGGAAA+AGG | 0.476933 | 4.3:+39307521 | MS.gene004000:CDS |
AATCTTTCTTCCATTCAGCT+TGG | 0.477827 | 4.3:+39306524 | MS.gene004000:CDS |
TATCATTTGGGCCGATAAGT+TGG | 0.479888 | 4.3:+39312470 | MS.gene004000:CDS |
CAAGCGCAGGAGTATTCTGC+TGG | 0.483479 | 4.3:+39305184 | MS.gene004000:CDS |
CCCTGGGCAAACTAAGGGGC+CGG | 0.484017 | 4.3:+39307579 | MS.gene004000:CDS |
GAAGTCTGCCTATGAAGATC+AGG | 0.486030 | 4.3:+39307655 | MS.gene004000:CDS |
CCCACTTCGCACTAGAGGAC+GGG | 0.489293 | 4.3:+39312513 | MS.gene004000:CDS |
TGTTTCCCTGGGCAAACTAA+GGG | 0.494124 | 4.3:+39307574 | MS.gene004000:CDS |
TATGATATTGGTGCCACATC+CGG | 0.495216 | 4.3:+39306363 | MS.gene004000:CDS |
AAGACCAAGAAAACTTCTCT+TGG | 0.498514 | 4.3:-39305234 | None:intergenic |
ATGTTATATATCTAGAGTGC+TGG | 0.506363 | 4.3:+39308033 | MS.gene004000:intron |
ATTCTTTGTCACCAAGTGGC+CGG | 0.507367 | 4.3:-39307598 | None:intergenic |
TCTTTACGTTGGTTGCTACC+AGG | 0.507374 | 4.3:+39308449 | MS.gene004000:CDS |
GAAGAGTGAGAGGTAAGAAG+TGG | 0.508074 | 4.3:-39305060 | None:intergenic |
CTTGCTGTGTTAATGGGACT+CGG | 0.509742 | 4.3:+39307461 | MS.gene004000:CDS |
TGAAATTGTAGCACCGGATG+TGG | 0.509979 | 4.3:-39306376 | None:intergenic |
GCTGCCAATTGTTGCTGTTG+GGG | 0.510591 | 4.3:+39308419 | MS.gene004000:CDS |
CTCGGATTCCTGATCTTCAT+AGG | 0.511530 | 4.3:-39307663 | None:intergenic |
GCTTTCAGATTAGTACAGTA+GGG | 0.511807 | 4.3:+39307405 | MS.gene004000:CDS |
CCTAGTGTTCTGTATTATGC+AGG | 0.524477 | 4.3:+39307916 | MS.gene004000:CDS |
AGTTTCTTAGAGGTGTTTCA+GGG | 0.524898 | 4.3:+39307689 | MS.gene004000:CDS |
CGGTGCTACAATTTCACTGC+AGG | 0.525053 | 4.3:+39306383 | MS.gene004000:CDS |
ACTGCCACAGCACCAGAACT+TGG | 0.525417 | 4.3:+39307062 | MS.gene004000:CDS |
CTGAAAGCATTCGTAATTGG+TGG | 0.525425 | 4.3:+39307719 | MS.gene004000:CDS |
CTGCTGATTGGAGGTGTCAG+TGG | 0.531307 | 4.3:+39308253 | MS.gene004000:CDS |
TTCTGGACAGATTCAAGCGC+AGG | 0.533095 | 4.3:+39305171 | MS.gene004000:intron |
AGAAGACCTCTGCTGATTGG+AGG | 0.533132 | 4.3:+39308244 | MS.gene004000:CDS |
TTGCTTCTCAAAGCCGTACA+AGG | 0.534906 | 4.3:+39307515 | MS.gene004000:CDS |
ACTTCTGTCCCAGAGACAAA+AGG | 0.535446 | 4.3:+39312790 | MS.gene004000:CDS |
CGACTCTCCCCGAATCTCCT+CGG | 0.539213 | 4.3:+39307489 | MS.gene004000:CDS |
GAAATTTATAATAAGCAGAA+AGG | 0.540216 | 4.3:-39308389 | None:intergenic |
TGAAAGCATTCGTAATTGGT+GGG | 0.542251 | 4.3:+39307720 | MS.gene004000:CDS |
TACCACAAGACCAAGCTGAA+TGG | 0.542358 | 4.3:-39306534 | None:intergenic |
CTGCAGTGAAATTGTAGCAC+CGG | 0.542977 | 4.3:-39306382 | None:intergenic |
CCTGCATAATACAGAACACT+AGG | 0.543440 | 4.3:-39307916 | None:intergenic |
AAAGCATTCGTAATTGGTGG+GGG | 0.543708 | 4.3:+39307722 | MS.gene004000:CDS |
ATCGGTTGCTGTCCTAAAAG+TGG | 0.545652 | 4.3:+39308210 | MS.gene004000:CDS |
GCCAAGAAGAGCCCCATAGA+GGG | 0.547197 | 4.3:-39306670 | None:intergenic |
TGCAAAGGTAACAACAGCAT+TGG | 0.547945 | 4.3:-39312569 | None:intergenic |
CTTATTATAAATTTCTCGGA+GGG | 0.549041 | 4.3:+39308397 | MS.gene004000:CDS |
TCACAGTCACCTGAGCTTAG+CGG | 0.551554 | 4.3:+39306488 | MS.gene004000:intron |
TCCTAAAAGTGGACGATTTG+GGG | 0.552375 | 4.3:+39308221 | MS.gene004000:CDS |
AAGAACTCTTCATCGTCTTG+GGG | 0.554273 | 4.3:+39307279 | MS.gene004000:CDS |
AATGAATTGCAGGCTATGCA+TGG | 0.556209 | 4.3:+39307194 | MS.gene004000:intron |
GCAGCCCTGTTGTATGTACT+TGG | 0.557623 | 4.3:+39307029 | MS.gene004000:CDS |
AGAAAGGAGAACTAAAGATA+AGG | 0.558234 | 4.3:-39308373 | None:intergenic |
AGCCAAGAAGAGCCCCATAG+AGG | 0.560695 | 4.3:-39306671 | None:intergenic |
CCCGTCCTCTAGTGCGAAGT+GGG | 0.561592 | 4.3:-39312513 | None:intergenic |
CAAGCGACACCGCTAAGCTC+AGG | 0.561862 | 4.3:-39306497 | None:intergenic |
CCACTTCGCACTAGAGGACG+GGG | 0.565068 | 4.3:+39312514 | MS.gene004000:CDS |
AGTCCCATTAACACAGCAAG+TGG | 0.566767 | 4.3:-39307458 | None:intergenic |
CCGGCCCCTTAGTTTGCCCA+GGG | 0.566966 | 4.3:-39307579 | None:intergenic |
AGCTTTCAGATTAGTACAGT+AGG | 0.568312 | 4.3:+39307404 | MS.gene004000:CDS |
TCCCACTTCGCACTAGAGGA+CGG | 0.571506 | 4.3:+39312512 | MS.gene004000:CDS |
AACACCAAGTTCTGGTGCTG+TGG | 0.571690 | 4.3:-39307066 | None:intergenic |
GAAAGCATTCGTAATTGGTG+GGG | 0.572471 | 4.3:+39307721 | MS.gene004000:CDS |
GAGTACTTACTTGGAATCTA+CGG | 0.575656 | 4.3:-39305089 | None:intergenic |
ATCTTCCCACTTCGCACTAG+AGG | 0.577398 | 4.3:+39312508 | MS.gene004000:CDS |
GGATAAGTGACACGTGTTGG+CGG | 0.577917 | 4.3:-39305039 | None:intergenic |
TCAGATTCTTTGTCACCAAG+TGG | 0.579152 | 4.3:-39307602 | None:intergenic |
GAAAAGGCAATTGTTTCCCT+GGG | 0.582828 | 4.3:+39307563 | MS.gene004000:CDS |
GGGGCGTTGCTTCTTTACGT+TGG | 0.589105 | 4.3:+39308438 | MS.gene004000:CDS |
AGTGGATAAGTGACACGTGT+TGG | 0.595252 | 4.3:-39305042 | None:intergenic |
TGGGCCGATAAGTTGGCTGA+TGG | 0.598976 | 4.3:+39312477 | MS.gene004000:CDS |
CACAAGTGACACTAATGCAA+TGG | 0.600703 | 4.3:-39312758 | None:intergenic |
AGAGTCCCACGGATTTGTGA+TGG | 0.602252 | 4.3:-39307245 | None:intergenic |
CCCCGTCCTCTAGTGCGAAG+TGG | 0.606766 | 4.3:-39312514 | None:intergenic |
CACCTCTAAGAAACTCGCCT+CGG | 0.606818 | 4.3:-39307681 | None:intergenic |
TTGGTGTTCTCTTAGCAGGA+AGG | 0.607143 | 4.3:+39307081 | MS.gene004000:CDS |
GGGAGGAAGCGACAACTCAT+CGG | 0.612912 | 4.3:+39307005 | MS.gene004000:intron |
CTTTCAGATTAGTACAGTAG+GGG | 0.614719 | 4.3:+39307406 | MS.gene004000:CDS |
AGGCAGACTTCAACGAGACA+AGG | 0.627144 | 4.3:-39307643 | None:intergenic |
ATAGCAAGCCACCCAATGCA+GGG | 0.629494 | 4.3:-39306335 | None:intergenic |
ATGGAAGAAGATATAATGCG+TGG | 0.630109 | 4.3:-39305003 | None:intergenic |
GGTCAGTGGTTCCCTCTATG+GGG | 0.636174 | 4.3:+39306659 | MS.gene004000:intron |
CTTCAATGGTGAGAATGCAA+AGG | 0.636883 | 4.3:-39312584 | None:intergenic |
GTTTCCCTGGGCAAACTAAG+GGG | 0.640750 | 4.3:+39307575 | MS.gene004000:CDS |
TTTCAGATTAGTACAGTAGG+GGG | 0.644587 | 4.3:+39307407 | MS.gene004000:CDS |
CTTGTCCATCACAAATCCGT+GGG | 0.645682 | 4.3:+39307240 | MS.gene004000:CDS |
AAGCGCAGGAGTATTCTGCT+GGG | 0.648733 | 4.3:+39305185 | MS.gene004000:CDS |
ACTTGTCCATCACAAATCCG+TGG | 0.650114 | 4.3:+39307239 | MS.gene004000:CDS |
GCTTATTATAAATTTCTCGG+AGG | 0.651466 | 4.3:+39308396 | MS.gene004000:CDS |
TTAATGATACTAGAGTCCCA+CGG | 0.652488 | 4.3:-39307256 | None:intergenic |
CTCTCCCCGAATCTCCTCGG+TGG | 0.653850 | 4.3:+39307492 | MS.gene004000:CDS |
CTATGAAGATCAGGAATCCG+AGG | 0.658223 | 4.3:+39307664 | MS.gene004000:CDS |
ACGGTGATGAGAAGAGTGAG+AGG | 0.662826 | 4.3:-39305070 | None:intergenic |
TAATGTCAAACATAGGTCAG+TGG | 0.676967 | 4.3:+39306645 | MS.gene004000:intron |
CCTGTAGTTAGTAATGACAT+CGG | 0.683946 | 4.3:+39308192 | MS.gene004000:intron |
CTGACACCTCCAATCAGCAG+AGG | 0.685495 | 4.3:-39308250 | None:intergenic |
AAGCATTCGTAATTGGTGGG+GGG | 0.698262 | 4.3:+39307723 | MS.gene004000:CDS |
CACTTCGCACTAGAGGACGG+GGG | 0.710664 | 4.3:+39312515 | MS.gene004000:CDS |
GCAACCACCGAGGAGATTCG+GGG | 0.734795 | 4.3:-39307496 | None:intergenic |
ACTACCAAGTACATACAACA+GGG | 0.734915 | 4.3:-39307033 | None:intergenic |
GCTTTGAGAAGCAACCACCG+AGG | 0.802099 | 4.3:-39307506 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 39304895 | 39312852 | 39304895 | ID=MS.gene004000 |
chr4.3 | mRNA | 39304895 | 39312852 | 39304895 | ID=MS.gene004000.t1;Parent=MS.gene004000 |
chr4.3 | exon | 39304895 | 39305101 | 39304895 | ID=MS.gene004000.t1.exon1;Parent=MS.gene004000.t1 |
chr4.3 | CDS | 39304895 | 39305101 | 39304895 | ID=cds.MS.gene004000.t1;Parent=MS.gene004000.t1 |
chr4.3 | exon | 39305181 | 39305269 | 39305181 | ID=MS.gene004000.t1.exon2;Parent=MS.gene004000.t1 |
chr4.3 | CDS | 39305181 | 39305269 | 39305181 | ID=cds.MS.gene004000.t1;Parent=MS.gene004000.t1 |
chr4.3 | exon | 39306326 | 39306404 | 39306326 | ID=MS.gene004000.t1.exon3;Parent=MS.gene004000.t1 |
chr4.3 | CDS | 39306326 | 39306404 | 39306326 | ID=cds.MS.gene004000.t1;Parent=MS.gene004000.t1 |
chr4.3 | exon | 39306494 | 39306553 | 39306494 | ID=MS.gene004000.t1.exon4;Parent=MS.gene004000.t1 |
chr4.3 | CDS | 39306494 | 39306553 | 39306494 | ID=cds.MS.gene004000.t1;Parent=MS.gene004000.t1 |
chr4.3 | exon | 39306660 | 39306726 | 39306660 | ID=MS.gene004000.t1.exon5;Parent=MS.gene004000.t1 |
chr4.3 | CDS | 39306660 | 39306726 | 39306660 | ID=cds.MS.gene004000.t1;Parent=MS.gene004000.t1 |
chr4.3 | exon | 39307006 | 39307130 | 39307006 | ID=MS.gene004000.t1.exon6;Parent=MS.gene004000.t1 |
chr4.3 | CDS | 39307006 | 39307130 | 39307006 | ID=cds.MS.gene004000.t1;Parent=MS.gene004000.t1 |
chr4.3 | exon | 39307206 | 39307307 | 39307206 | ID=MS.gene004000.t1.exon7;Parent=MS.gene004000.t1 |
chr4.3 | CDS | 39307206 | 39307307 | 39307206 | ID=cds.MS.gene004000.t1;Parent=MS.gene004000.t1 |
chr4.3 | exon | 39307386 | 39307763 | 39307386 | ID=MS.gene004000.t1.exon8;Parent=MS.gene004000.t1 |
chr4.3 | CDS | 39307386 | 39307763 | 39307386 | ID=cds.MS.gene004000.t1;Parent=MS.gene004000.t1 |
chr4.3 | exon | 39307904 | 39307951 | 39307904 | ID=MS.gene004000.t1.exon9;Parent=MS.gene004000.t1 |
chr4.3 | CDS | 39307904 | 39307951 | 39307904 | ID=cds.MS.gene004000.t1;Parent=MS.gene004000.t1 |
chr4.3 | exon | 39308048 | 39308110 | 39308048 | ID=MS.gene004000.t1.exon10;Parent=MS.gene004000.t1 |
chr4.3 | CDS | 39308048 | 39308110 | 39308048 | ID=cds.MS.gene004000.t1;Parent=MS.gene004000.t1 |
chr4.3 | exon | 39308199 | 39308279 | 39308199 | ID=MS.gene004000.t1.exon11;Parent=MS.gene004000.t1 |
chr4.3 | CDS | 39308199 | 39308279 | 39308199 | ID=cds.MS.gene004000.t1;Parent=MS.gene004000.t1 |
chr4.3 | exon | 39308372 | 39308470 | 39308372 | ID=MS.gene004000.t1.exon12;Parent=MS.gene004000.t1 |
chr4.3 | CDS | 39308372 | 39308470 | 39308372 | ID=cds.MS.gene004000.t1;Parent=MS.gene004000.t1 |
chr4.3 | exon | 39312469 | 39312606 | 39312469 | ID=MS.gene004000.t1.exon13;Parent=MS.gene004000.t1 |
chr4.3 | CDS | 39312469 | 39312606 | 39312469 | ID=cds.MS.gene004000.t1;Parent=MS.gene004000.t1 |
chr4.3 | exon | 39312718 | 39312852 | 39312718 | ID=MS.gene004000.t1.exon14;Parent=MS.gene004000.t1 |
chr4.3 | CDS | 39312718 | 39312852 | 39312718 | ID=cds.MS.gene004000.t1;Parent=MS.gene004000.t1 |
Gene Sequence |
Protein sequence |