AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene003775


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003775.t1 MTR_4g069500 99.042 522 5 0 1 522 1 522 0.0 1048
MS.gene003775.t1 MTR_4g069500 98.941 472 5 0 51 522 1 472 0.0 943
MS.gene003775.t1 MTR_3g116240 81.967 488 86 1 13 498 11 498 0.0 827
MS.gene003775.t1 MTR_4g072030 74.904 522 124 3 1 522 1 515 0.0 790
MS.gene003775.t1 MTR_4g069500 99.399 333 2 0 190 522 1 333 0.0 669
MS.gene003775.t1 MTR_8g077890 59.877 486 191 3 27 510 16 499 0.0 583
MS.gene003775.t1 MTR_5g075300 56.584 486 206 3 25 508 14 496 0.0 573
MS.gene003775.t1 MTR_6g088450 53.196 485 215 2 2 483 27 502 0.0 527
MS.gene003775.t1 MTR_2g013310 52.024 494 216 5 22 515 45 517 1.11e-176 508
MS.gene003775.t1 MTR_8g103500 52.473 465 213 2 27 491 15 471 2.99e-166 480
MS.gene003775.t1 MTR_7g446340 47.732 507 244 6 12 517 41 527 2.60e-163 474
MS.gene003775.t1 MTR_6g007340 47.732 507 244 6 12 517 41 527 2.60e-163 474
MS.gene003775.t1 MTR_2g013310 51.613 465 204 5 51 515 1 444 4.95e-163 470
MS.gene003775.t1 MTR_5g019870 47.590 498 241 5 27 519 12 494 2.97e-158 460
MS.gene003775.t1 MTR_3g084110 30.847 496 313 9 20 508 16 488 2.44e-72 238
MS.gene003775.t1 MTR_1g116660 31.837 490 300 11 17 497 20 484 5.01e-71 235
MS.gene003775.t1 MTR_7g005910 30.159 504 320 10 17 510 18 499 3.65e-70 233
MS.gene003775.t1 MTR_1g116650 30.382 497 300 8 17 502 63 524 7.28e-69 230
MS.gene003775.t1 MTR_4g077740 31.755 507 298 15 9 489 14 498 2.42e-68 228
MS.gene003775.t1 MTR_7g082270 31.546 485 295 12 11 488 45 499 3.23e-60 207
MS.gene003775.t1 MTR_3g074410 29.200 500 305 11 34 507 29 505 3.24e-60 207
MS.gene003775.t1 MTR_5g006070 29.134 508 309 11 32 513 25 507 1.54e-58 202
MS.gene003775.t1 MTR_0009s0370 28.952 525 321 13 20 515 10 511 6.03e-58 201
MS.gene003775.t1 MTR_6g018790 31.317 463 274 11 36 488 111 539 1.80e-57 200
MS.gene003775.t1 MTR_5g006070 29.825 456 291 8 63 513 28 459 1.93e-57 198
MS.gene003775.t1 MTR_3g023480 29.868 529 321 11 11 508 2 511 4.17e-57 198
MS.gene003775.t1 MTR_5g020270 28.542 487 312 10 12 491 31 488 3.59e-56 196
MS.gene003775.t1 MTR_5g077580 28.036 560 272 12 26 488 22 547 1.16e-54 193
MS.gene003775.t1 MTR_7g094450 28.660 485 306 9 12 490 22 472 2.85e-54 190
MS.gene003775.t1 MTR_5g041550 27.647 510 320 10 28 510 22 509 4.10e-54 191
MS.gene003775.t1 MTR_1g104750 28.834 489 301 12 32 497 26 490 6.85e-54 189
MS.gene003775.t1 MTR_3g074390 28.340 494 313 8 34 505 32 506 1.69e-53 189
MS.gene003775.t1 MTR_1g038600 29.191 507 321 9 1 499 1 477 1.70e-53 188
MS.gene003775.t1 MTR_3g008160 26.415 530 341 11 6 513 3 505 2.67e-53 188
MS.gene003775.t1 MTR_8g077310 27.273 462 307 8 33 491 50 485 4.20e-53 187
MS.gene003775.t1 MTR_4g090600 28.630 489 298 11 34 496 27 490 4.86e-53 187
MS.gene003775.t1 MTR_1g104770 27.291 491 310 9 34 497 27 497 4.98e-53 187
MS.gene003775.t1 MTR_1g104780 28.090 534 324 11 19 521 11 515 5.10e-53 188
MS.gene003775.t1 MTR_0204s0020 28.454 485 306 9 31 495 23 486 5.48e-53 187
MS.gene003775.t1 MTR_4g118610 28.484 488 312 9 10 491 30 486 1.13e-52 186
MS.gene003775.t1 MTR_7g082270 32.701 422 247 12 11 425 45 436 1.41e-52 185
MS.gene003775.t1 MTR_5g020270 30.476 420 251 10 81 491 1 388 2.71e-52 182
MS.gene003775.t1 MTR_0204s0020 28.423 482 307 9 31 495 23 483 2.84e-52 185
MS.gene003775.t1 MTR_1g022315 28.817 465 299 7 32 491 51 488 6.13e-52 184
MS.gene003775.t1 MTR_2g049020 32.500 360 223 6 26 382 22 364 8.24e-52 186
MS.gene003775.t1 MTR_3g008170 27.096 513 333 10 21 510 13 507 1.11e-51 184
MS.gene003775.t1 MTR_7g113970 29.103 457 296 7 35 491 67 495 1.17e-51 184
MS.gene003775.t1 MTR_1g038630 27.599 529 327 10 1 503 1 499 1.46e-51 184
MS.gene003775.t1 MTR_8g077300 27.291 502 310 10 16 491 5 477 2.32e-51 182
MS.gene003775.t1 MTR_3g008160 28.082 438 290 7 78 513 42 456 3.83e-51 181
MS.gene003775.t1 MTR_4g091370 27.403 489 304 9 34 496 27 490 5.17e-51 182
MS.gene003775.t1 MTR_2g020710 29.913 458 278 9 41 490 60 482 6.17e-51 181
MS.gene003775.t1 MTR_5g082540 28.846 520 317 12 21 512 14 508 6.98e-51 182
MS.gene003775.t1 MTR_0204s0040 28.024 496 315 10 21 495 20 494 1.37e-50 181
MS.gene003775.t1 MTR_3g093010 27.146 501 317 10 31 506 23 500 1.67e-50 181
MS.gene003775.t1 MTR_3g093060 29.056 413 270 6 80 488 46 439 2.72e-50 179
MS.gene003775.t1 MTR_2g026160 31.856 361 233 4 22 379 19 369 5.59e-50 181
MS.gene003775.t1 MTR_2g026160 37.374 99 62 0 398 496 463 561 1.91e-14 76.3
MS.gene003775.t1 MTR_8g102860 27.096 513 323 13 29 512 26 516 6.96e-50 179
MS.gene003775.t1 MTR_4g116770 28.024 496 315 10 21 495 216 690 1.36e-49 181
MS.gene003775.t1 MTR_2g020710 30.425 424 252 9 75 490 5 393 2.86e-49 174
MS.gene003775.t1 MTR_7g094110 28.392 479 315 7 12 490 24 474 4.20e-49 176
MS.gene003775.t1 MTR_8g102860 29.274 427 272 10 95 512 59 464 5.10e-49 176
MS.gene003775.t1 MTR_5g094760 27.419 496 314 10 23 495 20 492 1.40e-48 175
MS.gene003775.t1 MTR_6g087040 24.950 497 332 9 31 506 28 504 1.56e-48 175
MS.gene003775.t1 MTR_6g088375 24.950 497 332 9 31 506 28 504 1.56e-48 175
MS.gene003775.t1 MTR_4g116790 27.639 521 331 11 21 520 18 513 1.65e-48 176
MS.gene003775.t1 MTR_3g007910 26.884 491 305 11 31 507 23 473 1.94e-48 174
MS.gene003775.t1 MTR_7g091690 28.313 498 307 12 23 497 20 490 5.08e-48 174
MS.gene003775.t1 MTR_8g077310 27.578 417 267 9 81 491 1 388 1.20e-47 170
MS.gene003775.t1 MTR_1g022315 29.567 416 261 7 81 491 1 389 1.32e-47 170
MS.gene003775.t1 MTR_5g020270 27.010 485 301 10 12 491 31 467 3.44e-47 171
MS.gene003775.t1 MTR_7g113960 28.238 471 300 9 41 507 38 474 1.90e-46 169
MS.gene003775.t1 MTR_2g048720 32.869 359 208 8 26 374 22 357 2.29e-46 171
MS.gene003775.t1 MTR_3g074270 27.160 486 288 12 34 495 27 470 2.80e-44 163
MS.gene003775.t1 MTR_3g080240 28.151 476 289 13 30 490 93 530 8.15e-44 163
MS.gene003775.t1 MTR_2g026140 30.978 368 219 7 36 398 30 367 4.41e-41 155
MS.gene003775.t1 MTR_2g026140 36.364 99 63 0 398 496 448 546 6.44e-11 65.1
MS.gene003775.t1 MTR_4g064820 30.874 366 221 13 26 371 88 441 1.29e-40 153
MS.gene003775.t1 MTR_3g074370 30.973 339 207 7 176 508 21 338 3.91e-40 148
MS.gene003775.t1 MTR_2g020710 29.610 385 229 8 41 417 60 410 3.06e-39 148
MS.gene003775.t1 MTR_3g074320 29.970 337 213 6 176 508 21 338 3.13e-39 146
MS.gene003775.t1 MTR_3g074340 30.383 339 209 7 176 508 21 338 4.70e-39 145
MS.gene003775.t1 MTR_2g020710 29.688 384 228 8 41 416 60 409 5.24e-39 147
MS.gene003775.t1 MTR_6g087910 27.143 490 320 10 7 488 23 483 8.13e-39 148
MS.gene003775.t1 MTR_4g118610 27.778 414 263 8 10 417 30 413 1.03e-38 147
MS.gene003775.t1 MTR_7g094110 26.514 479 304 7 12 490 24 454 1.46e-38 147
MS.gene003775.t1 MTR_3g074380 27.606 355 220 6 34 369 30 366 5.16e-38 143
MS.gene003775.t1 MTR_8g077310 27.193 342 224 5 33 374 50 366 3.33e-37 142
MS.gene003775.t1 MTR_4g013205 26.994 489 318 9 6 488 14 469 2.10e-36 141
MS.gene003775.t1 MTR_7g113970 27.035 344 225 5 35 378 67 384 1.13e-32 129
MS.gene003775.t1 MTR_3g116060 34.043 235 144 5 28 257 2 230 1.14e-32 132
MS.gene003775.t1 MTR_3g116060 29.167 240 154 6 272 502 496 728 1.27e-21 99.4
MS.gene003775.t1 MTR_2g020710 28.070 342 205 7 41 374 60 368 7.92e-30 120
MS.gene003775.t1 MTR_4g116790 25.210 357 229 6 21 358 18 355 4.70e-29 119
MS.gene003775.t1 MTR_3g118530 36.098 205 121 5 41 239 15 215 8.71e-29 121
MS.gene003775.t1 MTR_3g118530 29.730 222 140 6 273 485 507 721 7.11e-23 103
MS.gene003775.t1 MTR_3g118530 36.098 205 121 5 41 239 15 215 1.21e-28 120
MS.gene003775.t1 MTR_7g113960 27.485 342 214 7 41 378 38 349 2.80e-28 116
MS.gene003775.t1 MTR_5g024740 33.005 203 128 4 34 231 8 207 1.14e-25 111
MS.gene003775.t1 MTR_5g024740 29.249 253 160 6 245 485 458 703 1.39e-17 86.7
MS.gene003775.t1 MTR_8g073100 31.527 203 131 5 34 231 8 207 2.49e-24 107
MS.gene003775.t1 MTR_8g073100 27.928 222 144 4 273 485 485 699 1.61e-18 89.4
MS.gene003775.t1 MTR_5g044910 31.527 203 131 4 34 231 8 207 5.30e-24 106
MS.gene003775.t1 MTR_5g044910 27.068 266 171 6 231 485 448 701 4.95e-18 87.8
MS.gene003775.t1 MTR_3g074400 25.000 424 244 12 81 481 44 416 8.85e-23 101
MS.gene003775.t1 MTR_2g081930 25.000 420 266 18 80 486 134 517 1.03e-12 70.9
MS.gene003775.t1 MTR_1g069935 24.453 548 305 22 11 487 2 511 1.92e-12 70.1
MS.gene003775.t1 MTR_5g096000 30.000 150 104 1 31 179 23 172 1.44e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene003775.t1 AT3G18830 72.565 503 135 3 20 519 26 528 0.0 756
MS.gene003775.t1 AT2G16120 67.617 491 156 3 23 511 19 508 0.0 685
MS.gene003775.t1 AT2G16130 67.360 481 155 2 23 501 19 499 0.0 675
MS.gene003775.t1 AT4G36670 57.526 485 205 1 21 504 8 492 0.0 576
MS.gene003775.t1 AT2G18480 58.542 480 195 3 13 491 7 483 0.0 556
MS.gene003775.t1 AT2G20780 49.004 502 236 6 8 506 34 518 1.69e-166 482
MS.gene003775.t1 AT2G20780 49.446 451 209 5 59 506 26 460 2.81e-148 433
MS.gene003775.t1 AT2G43330 31.928 498 312 8 6 497 5 481 2.66e-69 231
MS.gene003775.t1 AT5G59250 31.590 478 278 11 35 489 103 554 3.12e-65 221
MS.gene003775.t1 AT5G17010 31.225 506 294 15 13 489 20 500 8.67e-65 219
MS.gene003775.t1 AT5G17010 31.225 506 294 15 13 489 20 500 8.67e-65 219
MS.gene003775.t1 AT5G17010 31.225 506 294 15 13 489 20 500 8.67e-65 219
MS.gene003775.t1 AT1G50310 29.058 499 308 9 34 509 29 504 2.07e-62 213
MS.gene003775.t1 AT1G11260 28.460 513 319 11 31 519 25 513 1.18e-61 211
MS.gene003775.t1 AT3G19940 29.051 506 298 11 34 509 29 503 3.10e-60 207
MS.gene003775.t1 AT3G05150 30.632 506 302 10 7 500 8 476 2.21e-59 204
MS.gene003775.t1 AT3G03090 31.210 471 286 12 35 489 52 500 6.71e-59 203
MS.gene003775.t1 AT5G16150 32.265 499 289 12 5 488 75 539 8.40e-59 204
MS.gene003775.t1 AT5G16150 32.265 499 289 12 5 488 75 539 8.40e-59 204
MS.gene003775.t1 AT5G16150 32.265 499 289 12 5 488 75 539 8.40e-59 204
MS.gene003775.t1 AT5G27360 29.124 491 309 12 8 491 10 468 1.47e-58 202
MS.gene003775.t1 AT5G27360 29.124 491 309 12 8 491 58 516 4.72e-58 201
MS.gene003775.t1 AT3G05150 30.303 495 298 9 7 489 8 467 7.88e-58 199
MS.gene003775.t1 AT3G05150 30.303 495 298 9 7 489 8 467 7.88e-58 199
MS.gene003775.t1 AT5G23270 29.084 502 285 11 34 499 28 494 5.82e-57 198
MS.gene003775.t1 AT5G27350 29.175 497 309 11 1 490 3 463 1.23e-56 196
MS.gene003775.t1 AT3G05960 28.433 517 323 10 20 509 11 507 5.98e-55 192
MS.gene003775.t1 AT1G54730 30.065 459 283 10 41 494 43 468 5.99e-55 192
MS.gene003775.t1 AT1G75220 28.448 464 303 7 31 491 49 486 1.43e-54 191
MS.gene003775.t1 AT5G18840 28.659 492 311 9 7 490 18 477 4.96e-54 189
MS.gene003775.t1 AT3G19930 27.290 524 333 11 15 515 12 510 7.32e-54 190
MS.gene003775.t1 AT3G19930 27.290 524 333 11 15 515 12 510 7.32e-54 190
MS.gene003775.t1 AT5G26340 27.755 490 306 11 32 497 26 491 3.15e-53 188
MS.gene003775.t1 AT5G26250 28.185 518 327 11 14 510 10 503 4.35e-53 187
MS.gene003775.t1 AT1G34580 29.032 496 304 13 34 502 28 502 5.08e-53 187
MS.gene003775.t1 AT1G19450 28.017 464 305 7 31 491 50 487 9.13e-53 186
MS.gene003775.t1 AT4G21480 28.800 500 309 13 25 499 18 495 3.37e-52 185
MS.gene003775.t1 AT1G34580 30.930 430 268 10 81 502 44 452 4.52e-52 184
MS.gene003775.t1 AT3G05165 26.908 498 314 10 6 490 2 462 8.25e-52 183
MS.gene003775.t1 AT3G05165 26.908 498 314 10 6 490 2 462 8.25e-52 183
MS.gene003775.t1 AT3G05165 26.908 498 314 10 6 490 2 462 8.25e-52 183
MS.gene003775.t1 AT1G50310 31.536 371 228 7 142 509 14 361 5.57e-51 179
MS.gene003775.t1 AT3G05160 25.941 478 314 7 21 490 8 453 1.75e-49 177
MS.gene003775.t1 AT1G07340 28.654 520 327 12 9 507 2 498 3.71e-49 177
MS.gene003775.t1 AT5G27360 30.990 384 231 10 110 490 11 363 3.97e-49 174
MS.gene003775.t1 AT5G27360 30.990 384 231 10 110 490 11 363 3.97e-49 174
MS.gene003775.t1 AT1G30220 31.988 347 216 5 26 367 24 355 6.70e-49 178
MS.gene003775.t1 AT1G30220 31.356 118 75 1 398 509 463 580 1.00e-13 74.3
MS.gene003775.t1 AT2G48020 27.010 485 316 10 8 489 10 459 2.19e-48 174
MS.gene003775.t1 AT2G48020 27.010 485 316 10 8 489 10 459 2.19e-48 174
MS.gene003775.t1 AT4G02050 27.220 518 328 10 21 511 18 513 2.89e-48 175
MS.gene003775.t1 AT4G02050 27.220 518 328 10 21 511 18 513 2.89e-48 175
MS.gene003775.t1 AT1G08930 27.823 496 311 11 8 489 27 489 2.94e-48 174
MS.gene003775.t1 AT1G08930 27.823 496 311 11 8 489 27 489 2.94e-48 174
MS.gene003775.t1 AT1G05030 30.480 479 274 14 30 490 79 516 1.59e-47 173
MS.gene003775.t1 AT1G54730 30.000 410 250 9 41 445 43 420 2.22e-47 171
MS.gene003775.t1 AT1G77210 26.946 501 321 11 29 506 26 504 9.26e-47 170
MS.gene003775.t1 AT1G77210 26.946 501 321 11 29 506 26 504 9.26e-47 170
MS.gene003775.t1 AT3G05400 27.790 457 290 11 41 491 37 459 4.80e-46 167
MS.gene003775.t1 AT3G05160 26.667 435 283 6 60 490 2 404 8.00e-46 166
MS.gene003775.t1 AT3G05160 26.667 435 283 6 60 490 2 404 8.00e-46 166
MS.gene003775.t1 AT2G35740 30.471 361 236 7 29 385 25 374 1.15e-45 169
MS.gene003775.t1 AT2G35740 33.628 113 72 1 398 507 466 578 5.62e-14 75.1
MS.gene003775.t1 AT4G04750 27.273 440 282 13 58 491 64 471 1.47e-45 167
MS.gene003775.t1 AT4G04750 27.273 440 282 13 58 491 64 471 1.47e-45 167
MS.gene003775.t1 AT4G04750 27.273 440 282 13 58 491 108 515 2.49e-45 167
MS.gene003775.t1 AT1G54730 28.446 457 272 11 41 494 43 447 7.27e-45 164
MS.gene003775.t1 AT5G61520 25.686 510 331 10 25 506 19 508 7.43e-45 165
MS.gene003775.t1 AT4G16480 30.585 376 241 7 1 371 1 361 3.03e-44 165
MS.gene003775.t1 AT4G16480 35.345 116 71 1 398 509 467 582 1.07e-15 80.5
MS.gene003775.t1 AT4G16480 30.585 376 241 7 1 371 1 361 3.03e-44 165
MS.gene003775.t1 AT4G16480 35.345 116 71 1 398 509 467 582 1.07e-15 80.5
MS.gene003775.t1 AT4G16480 30.585 376 241 7 1 371 1 361 3.03e-44 165
MS.gene003775.t1 AT4G16480 35.345 116 71 1 398 509 467 582 1.07e-15 80.5
MS.gene003775.t1 AT4G04760 27.097 465 298 12 35 491 36 467 2.34e-43 160
MS.gene003775.t1 AT5G27360 28.471 425 266 11 8 425 10 403 2.72e-43 159
MS.gene003775.t1 AT1G08890 26.096 479 321 8 21 494 13 463 3.66e-43 160
MS.gene003775.t1 AT4G04760 27.500 440 278 12 60 491 2 408 3.96e-43 159
MS.gene003775.t1 AT5G61520 27.040 429 290 7 81 506 52 460 4.07e-43 159
MS.gene003775.t1 AT1G79820 30.444 473 286 13 28 491 52 490 1.11e-42 159
MS.gene003775.t1 AT1G79820 30.444 473 286 13 28 491 52 490 1.11e-42 159
MS.gene003775.t1 AT3G05400 30.127 395 235 12 104 491 79 439 1.65e-42 157
MS.gene003775.t1 AT3G05155 26.049 453 295 8 41 488 38 455 2.01e-42 157
MS.gene003775.t1 AT1G08900 26.638 473 316 9 22 494 12 453 4.98e-42 156
MS.gene003775.t1 AT3G05165 26.651 439 288 8 6 439 2 411 7.35e-42 156
MS.gene003775.t1 AT3G05165 26.651 439 288 8 6 439 2 411 7.35e-42 156
MS.gene003775.t1 AT1G05030 29.630 459 264 14 50 490 47 464 2.48e-41 155
MS.gene003775.t1 AT1G08900 26.569 478 318 9 22 494 12 461 2.74e-41 154
MS.gene003775.t1 AT1G08900 26.569 478 318 9 22 494 12 461 2.74e-41 154
MS.gene003775.t1 AT3G05165 26.651 439 288 8 6 439 2 411 2.98e-41 155
MS.gene003775.t1 AT1G54730 29.319 382 233 9 41 417 43 392 3.38e-41 153
MS.gene003775.t1 AT1G54730 29.319 382 233 9 41 417 43 392 3.38e-41 153
MS.gene003775.t1 AT1G67300 27.475 495 321 10 6 490 23 489 3.58e-41 155
MS.gene003775.t1 AT1G08900 27.231 437 290 8 58 494 11 419 8.24e-41 152
MS.gene003775.t1 AT1G67300 26.721 494 325 10 6 490 23 488 1.41e-39 150
MS.gene003775.t1 AT1G67300 26.721 494 325 10 6 490 23 488 1.41e-39 150
MS.gene003775.t1 AT5G17010 27.059 510 262 16 7 489 11 437 5.05e-39 148
MS.gene003775.t1 AT1G67300 26.984 441 285 10 6 437 23 435 3.79e-38 145
MS.gene003775.t1 AT1G67300 26.984 441 285 10 6 437 23 435 3.79e-38 145
MS.gene003775.t1 AT1G54730 28.186 408 239 10 41 445 43 399 1.46e-37 143
MS.gene003775.t1 AT1G79820 30.935 417 249 11 28 437 52 436 1.57e-37 144
MS.gene003775.t1 AT1G67300 26.852 432 279 10 6 428 23 426 2.25e-37 143
MS.gene003775.t1 AT1G67300 26.852 432 279 10 6 428 23 426 2.25e-37 143
MS.gene003775.t1 AT1G77210 27.151 372 247 7 138 506 5 355 6.12e-37 140
MS.gene003775.t1 AT3G20460 26.211 454 297 9 45 493 68 488 9.02e-37 142
MS.gene003775.t1 AT4G04760 25.591 465 302 13 35 491 36 464 7.40e-36 139
MS.gene003775.t1 AT3G51490 35.776 232 134 7 34 257 8 232 3.57e-34 137
MS.gene003775.t1 AT3G51490 28.682 258 165 7 244 491 472 720 7.78e-22 100
MS.gene003775.t1 AT3G51490 35.776 232 134 7 34 257 8 232 3.62e-34 137
MS.gene003775.t1 AT3G51490 27.165 254 166 7 244 491 472 712 1.68e-18 89.4
MS.gene003775.t1 AT1G54730 29.063 320 195 7 41 357 43 333 3.75e-34 132
MS.gene003775.t1 AT1G20840 36.364 209 123 4 28 231 2 205 1.72e-32 132
MS.gene003775.t1 AT1G20840 30.864 243 150 6 272 503 498 733 1.56e-18 89.7
MS.gene003775.t1 AT1G20840 36.364 209 123 4 28 231 2 205 1.72e-32 132
MS.gene003775.t1 AT1G20840 30.864 243 150 6 272 503 498 733 1.56e-18 89.7
MS.gene003775.t1 AT1G08920 25.926 459 294 13 41 490 43 464 4.08e-32 129
MS.gene003775.t1 AT1G08900 26.340 429 284 8 22 445 12 413 1.17e-31 127
MS.gene003775.t1 AT1G54730 27.368 380 222 10 41 417 43 371 1.29e-31 126
MS.gene003775.t1 AT2G48020 26.593 361 233 7 23 380 21 352 2.80e-31 125
MS.gene003775.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.35e-30 125
MS.gene003775.t1 AT4G35300 28.400 250 155 5 266 502 489 727 1.59e-22 102
MS.gene003775.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.35e-30 125
MS.gene003775.t1 AT4G35300 28.400 250 155 5 266 502 489 727 1.59e-22 102
MS.gene003775.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.35e-30 125
MS.gene003775.t1 AT4G35300 28.400 250 155 5 266 502 489 727 1.59e-22 102
MS.gene003775.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.45e-30 125
MS.gene003775.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.62e-22 102
MS.gene003775.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.45e-30 125
MS.gene003775.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.62e-22 102
MS.gene003775.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.45e-30 125
MS.gene003775.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.62e-22 102
MS.gene003775.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.45e-30 125
MS.gene003775.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.62e-22 102
MS.gene003775.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.45e-30 125
MS.gene003775.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.62e-22 102
MS.gene003775.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.45e-30 125
MS.gene003775.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.62e-22 102
MS.gene003775.t1 AT4G35300 34.404 218 132 6 41 252 15 227 2.45e-30 125
MS.gene003775.t1 AT4G35300 28.400 250 155 5 266 502 499 737 1.62e-22 102
MS.gene003775.t1 AT1G08920 25.536 466 294 14 41 490 43 471 7.22e-30 122
MS.gene003775.t1 AT1G54730 28.053 303 189 7 41 339 43 320 4.64e-29 117
MS.gene003775.t1 AT1G54730 28.053 303 189 7 41 339 43 320 4.64e-29 117
MS.gene003775.t1 AT3G51490 36.757 185 106 5 80 257 2 182 8.95e-28 118
MS.gene003775.t1 AT3G51490 28.682 258 165 7 244 491 422 670 9.46e-22 99.8
MS.gene003775.t1 AT2G48020 25.882 340 220 7 23 359 21 331 8.99e-28 114
MS.gene003775.t1 AT3G05155 25.705 319 204 8 41 357 38 325 4.77e-26 108
MS.gene003775.t1 AT1G08920 25.765 392 246 12 41 423 43 398 1.07e-23 104
MS.gene003775.t1 AT4G35300 28.400 250 155 5 266 502 302 540 1.21e-22 101
MS.gene003775.t1 AT1G79820 30.622 209 135 4 28 231 52 255 7.43e-17 83.6
MS.gene003775.t1 AT1G79820 33.553 152 93 3 342 491 297 442 1.51e-11 67.0
MS.gene003775.t1 AT1G79820 33.553 152 93 3 342 491 235 380 1.32e-11 67.0
MS.gene003775.t1 AT5G43340 22.669 472 279 16 66 488 68 502 5.70e-11 65.5
MS.gene003775.t1 AT3G13050 25.909 440 266 15 81 486 74 487 6.89e-11 65.1
MS.gene003775.t1 AT3G13050 25.909 440 266 15 81 486 74 487 6.89e-11 65.1
MS.gene003775.t1 AT3G13050 25.909 440 266 15 81 486 74 487 6.89e-11 65.1
MS.gene003775.t1 AT3G13050 25.909 440 266 15 81 486 74 487 6.89e-11 65.1

Find 114 sgRNAs with CRISPR-Local

Find 166 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCAAACACAAAGCTAAAT+TGG 0.143556 4.1:-32978369 MS.gene003775:CDS
TCAAAACTATCACTTAAATT+AGG 0.212301 4.1:-32979052 MS.gene003775:CDS
TTTACCATATCCAAGTAAAA+TGG 0.248936 4.1:+32980109 None:intergenic
CTCATTGGTTCATGTCTTGC+CGG 0.296833 4.1:-32979761 MS.gene003775:CDS
GAAGAAATGGAAGCCTCTTT+TGG 0.298781 4.1:-32978052 MS.gene003775:CDS
CTTGTGGTGTTGTGGTGAAT+AGG 0.316596 4.1:-32978222 MS.gene003775:CDS
TAAGGCTCCGGCAAAGAAAA+TGG 0.330343 4.1:+32979688 None:intergenic
TTTGGAGGTATTGCTACAAT+TGG 0.332942 4.1:-32978124 MS.gene003775:CDS
CGTTACACCATCGTGTTTGC+CGG 0.353883 4.1:-32979713 MS.gene003775:CDS
GGGAAAATTGAGGTCTTGTT+AGG 0.356338 4.1:-32979803 MS.gene003775:CDS
ATAAACAGTGGAATATTAAT+CGG 0.362212 4.1:-32979097 MS.gene003775:CDS
CAAGTTGCACAAGTTCAGTT+AGG 0.362764 4.1:-32977977 MS.gene003775:CDS
TTGTAGCAATACCTCCAAAT+AGG 0.368433 4.1:+32978128 None:intergenic
AACTACAACTTCCTCATGTT+TGG 0.374495 4.1:-32979647 MS.gene003775:CDS
GAGAAAGCCACGAGAGGAAG+CGG 0.386076 4.1:+32979553 None:intergenic
ACATCGTCGTTGCAATCTTC+AGG 0.387621 4.1:+32978748 None:intergenic
TATGTAGCAACTTTCTCAAT+TGG 0.390137 4.1:-32978313 MS.gene003775:CDS
AGGTAAAACACTTGAAGAAA+TGG 0.392070 4.1:-32978065 MS.gene003775:CDS
AAAACACTGGTGAAGGTGTA+TGG 0.424900 4.1:-32978708 MS.gene003775:CDS
TTCAAACACAAAGCTAAATT+GGG 0.444039 4.1:-32978368 MS.gene003775:CDS
GAGACTTCAGCGGTATAGAC+CGG 0.444678 4.1:+32979578 None:intergenic
AGAAAGCCACGAGAGGAAGC+GGG 0.446522 4.1:+32979554 None:intergenic
AACTATCACTTAAATTAGGT+TGG 0.451312 4.1:-32979048 MS.gene003775:CDS
AACATGAGGAAGTTGTAGTT+TGG 0.455379 4.1:+32979650 None:intergenic
TTGGAGGTATTGCTACAATT+GGG 0.464188 4.1:-32978123 MS.gene003775:CDS
TTGTGGTGTTGTGGTGAATA+GGG 0.468285 4.1:-32978221 MS.gene003775:CDS
CCTTTGAGGTTGAGGGCACA+AGG 0.470587 4.1:-32978250 MS.gene003775:CDS
AGACTTCAGCGGTATAGACC+GGG 0.470597 4.1:+32979579 None:intergenic
AGCATAGCCGATGCCAACTC+CGG 0.471335 4.1:+32979613 None:intergenic
ATCAACATCTACTCTCTCAT+TGG 0.471388 4.1:-32979776 MS.gene003775:CDS
TGCCAACTCCGGCGACAAAA+CGG 0.474251 4.1:+32979624 None:intergenic
TGGTGAATAGGGTCACTAGT+GGG 0.475348 4.1:-32978210 MS.gene003775:CDS
CCTTAGCTGAGCCTCTTCCT+TGG 0.476032 4.1:+32978886 None:intergenic
ACGAGCCATCGTGGTGACTC+TGG 0.481166 4.1:+32978962 None:intergenic
CTTTGCCGGAGCCTTACTCA+TGG 0.483078 4.1:-32979681 MS.gene003775:CDS
ACAAAGCTAAATTGGGCCAT+TGG 0.485743 4.1:-32978361 MS.gene003775:CDS
ACTCACTAGTGTTGGTGGTA+TGG 0.486491 4.1:-32978437 MS.gene003775:CDS
TGGAGTAGGTGCAATTCCTT+CGG 0.488446 4.1:-32979014 MS.gene003775:CDS
GAGAAAATCAAAGAATACTA+AGG 0.489393 4.1:-32978020 MS.gene003775:CDS
TCCAGCGGCTTGTTTAATCT+CGG 0.492502 4.1:+32978774 None:intergenic
CTGTTACTCACTAGTGTTGG+TGG 0.493290 4.1:-32978442 MS.gene003775:CDS
TCCAAGTAAAATGGAAGTCA+TGG 0.500166 4.1:+32980118 None:intergenic
TCTAAAGGAATTACGATTGG+TGG 0.500778 4.1:-32978160 MS.gene003775:CDS
TTTGTCGCCGGAGTTGGCAT+CGG 0.500928 4.1:-32979620 MS.gene003775:CDS
CTCGTAATGAGAGGTCGTTT+AGG 0.500941 4.1:-32978944 MS.gene003775:CDS
TGGTGAGAAACCCATGAGTA+AGG 0.502832 4.1:+32979670 None:intergenic
CATATTGTAATAGCTGCACT+AGG 0.508847 4.1:-32978649 MS.gene003775:CDS
TTTGCCGGAGCCTTACTCAT+GGG 0.509489 4.1:-32979680 MS.gene003775:CDS
CTTAACAAATCCAACGGCTA+TGG 0.515197 4.1:+32978519 None:intergenic
CTTATTGCAACCATAGCCGT+TGG 0.515422 4.1:-32978529 MS.gene003775:CDS
GCAACTTTCTCAATTGGTGC+AGG 0.518421 4.1:-32978307 MS.gene003775:CDS
TATCTACTAAGTTGAGACAT+TGG 0.518461 4.1:+32977952 None:intergenic
AATCCAGTCGGAGGTTCTGC+CGG 0.519805 4.1:+32979742 None:intergenic
CAACAAAACTTCAGATTCCA+AGG 0.520556 4.1:-32978903 MS.gene003775:CDS
AAGTTGCACAAGTTCAGTTA+GGG 0.522313 4.1:-32977976 MS.gene003775:CDS
AACTTCAGATTCCAAGGAAG+AGG 0.522917 4.1:-32978897 MS.gene003775:CDS
GGCAGAACCTCCGACTGGAT+TGG 0.526767 4.1:-32979740 MS.gene003775:CDS
GAAAGCCACGAGAGGAAGCG+GGG 0.529030 4.1:+32979555 None:intergenic
AAAGCCACGAGAGGAAGCGG+GGG 0.538579 4.1:+32979556 None:intergenic
ACAGTGGACGACGACCATAT+CGG 0.540286 4.1:+32978461 None:intergenic
CTATGCTCTCATGATTGCCC+CGG 0.541782 4.1:-32979597 MS.gene003775:CDS
TTAGGTTGGAGAATGATGCT+TGG 0.547667 4.1:-32979034 MS.gene003775:CDS
GCCGAGATTAAACAAGCCGC+TGG 0.549351 4.1:-32978775 MS.gene003775:CDS
ACTACTATAAACCCATGTGA+TGG 0.549519 4.1:+32978282 None:intergenic
TCCGGCAAAGAAAATGGCGC+CGG 0.556292 4.1:+32979694 None:intergenic
CCTTGTGCCCTCAACCTCAA+AGG 0.562045 4.1:+32978250 None:intergenic
AGTATCCGACGGGAAAATTG+AGG 0.564384 4.1:-32979813 MS.gene003775:CDS
TTGTCTAAAGGAATTACGAT+TGG 0.569189 4.1:-32978163 MS.gene003775:CDS
AGGTGCAGCTTGTGGTGTTG+TGG 0.570667 4.1:-32978230 MS.gene003775:CDS
GAGGTATTGCTACAATTGGG+TGG 0.571968 4.1:-32978120 MS.gene003775:CDS
GTGGTGAATAGGGTCACTAG+TGG 0.574539 4.1:-32978211 MS.gene003775:CDS
CTACTATAAACCCATGTGAT+GGG 0.576148 4.1:+32978283 None:intergenic
TTGCCGGCAGAACCTCCGAC+TGG 0.576660 4.1:-32979745 MS.gene003775:CDS
TGGCTAAGACTCCAACGGCT+AGG 0.579484 4.1:+32978987 None:intergenic
ATATGACGAACTGCGGGTGT+AGG 0.580443 4.1:+32978667 None:intergenic
GAAACCCATGAGTAAGGCTC+CGG 0.584696 4.1:+32979676 None:intergenic
TTGGTGCAGGACCCATCACA+TGG 0.585356 4.1:-32978294 MS.gene003775:CDS
CCACGATGGCTCGTAATGAG+AGG 0.586462 4.1:-32978953 MS.gene003775:CDS
CGACAAAACGGCCAAACATG+AGG 0.587511 4.1:+32979636 None:intergenic
CTTTCTCACTTCTTTCCCAG+AGG 0.589254 4.1:-32979537 MS.gene003775:intron
ACAGATATTGGTGTTATGAG+TGG 0.592393 4.1:-32979866 MS.gene003775:intron
AGGGCACAAGGTGCAGCTTG+TGG 0.595043 4.1:-32978238 MS.gene003775:CDS
CCATCGTGGTGACTCTGGCA+TGG 0.596487 4.1:+32978967 None:intergenic
CCACTGTTACTCACTAGTGT+TGG 0.601446 4.1:-32978445 MS.gene003775:CDS
CCTTCGGTAATCCTAGCCGT+TGG 0.603205 4.1:-32978998 MS.gene003775:CDS
CCAAGGAAGAGGCTCAGCTA+AGG 0.609894 4.1:-32978886 MS.gene003775:intron
GAGACCTTAAAGTATCCGAC+GGG 0.613965 4.1:-32979823 MS.gene003775:CDS
TTGAATGATCGATGATCGTA+AGG 0.614986 4.1:+32978386 None:intergenic
CAAAACTACAGCGTCTACAC+CGG 0.619548 4.1:+32978603 None:intergenic
ATTACAATATGACGAACTGC+GGG 0.625794 4.1:+32978661 None:intergenic
AGAGACCTTAAAGTATCCGA+CGG 0.628792 4.1:-32979824 MS.gene003775:CDS
CAAGGTCTTAACAAATCCAA+CGG 0.634572 4.1:+32978513 None:intergenic
AGTTGCTATACTCAATCCAA+TGG 0.639610 4.1:+32978345 None:intergenic
TGGCATGGCTAAGACTCCAA+CGG 0.641928 4.1:+32978982 None:intergenic
AATGGCGCCGGCAAACACGA+TGG 0.644723 4.1:+32979706 None:intergenic
CCTCTCATTACGAGCCATCG+TGG 0.646747 4.1:+32978953 None:intergenic
TGGAGAATGATGCTTGGAGT+AGG 0.648761 4.1:-32979028 MS.gene003775:CDS
GGTGAATAGGGTCACTAGTG+GGG 0.657688 4.1:-32978209 MS.gene003775:CDS
ATATTGTAATAGCTGCACTA+GGG 0.658336 4.1:-32978648 MS.gene003775:CDS
AGAAGTGAGAAAGCCACGAG+AGG 0.660349 4.1:+32979547 None:intergenic
TATTACAATATGACGAACTG+CGG 0.663026 4.1:+32978660 None:intergenic
AATCGTAATTCCTTTAGACA+AGG 0.664820 4.1:+32978165 None:intergenic
TGGTGCAGGACCCATCACAT+GGG 0.673212 4.1:-32978293 MS.gene003775:CDS
GCAATCTTCAGGTATTCCAG+CGG 0.674448 4.1:+32978759 None:intergenic
AGTAGCCACTAAAATAAACA+AGG 0.678884 4.1:+32978495 None:intergenic
TATTGTGTCAAGATGAGTGA+GGG 0.685265 4.1:-32980242 None:intergenic
CCAACACTAGTGAGTAACAG+TGG 0.692907 4.1:+32978445 None:intergenic
CCAACGGCTAGGATTACCGA+AGG 0.696585 4.1:+32978998 None:intergenic
GACTTCAGCGGTATAGACCG+GGG 0.704184 4.1:+32979580 None:intergenic
ACGACGACCAATCCAGTCGG+AGG 0.711720 4.1:+32979733 None:intergenic
ATTATGCTTCCTGAAACACA+AGG 0.721140 4.1:-32978085 MS.gene003775:CDS
GTAACGACGACCAATCCAGT+CGG 0.738715 4.1:+32979730 None:intergenic
CCATGCCAGAGTCACCACGA+TGG 0.743650 4.1:-32978967 MS.gene003775:CDS
ATATTGTGTCAAGATGAGTG+AGG 0.744896 4.1:-32980243 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATATAATATGAGA+TGG + chr4.1:32978118-32978137 None:intergenic 10.0%
!! ATAAATAACTCTTATAAAAC+TGG - chr4.1:32978845-32978864 MS.gene003775:intron 15.0%
!!! AATGCATAATTTCTTTTAAA+AGG + chr4.1:32978937-32978956 None:intergenic 15.0%
!!! TTTTTTATCTCTATTTATCA+AGG + chr4.1:32978808-32978827 None:intergenic 15.0%
!! AGAGATAAAAAAAGTAAAAG+TGG - chr4.1:32978816-32978835 MS.gene003775:intron 20.0%
!! ATAAACAGTGGAATATTAAT+CGG - chr4.1:32979091-32979110 MS.gene003775:CDS 20.0%
!! ATAACAAGAGGATAAAATAT+TGG + chr4.1:32978265-32978284 None:intergenic 20.0%
!! GATAGAATAGTAAATTTCAA+TGG - chr4.1:32978879-32978898 MS.gene003775:intron 20.0%
!! TCAAAACTATCACTTAAATT+AGG - chr4.1:32979136-32979155 MS.gene003775:intron 20.0%
!! TCAAATTGATCATTTATTCT+CGG + chr4.1:32979332-32979351 None:intergenic 20.0%
!! TTCATAATACACGATAATAT+AGG - chr4.1:32979023-32979042 MS.gene003775:CDS 20.0%
!!! GTGCTATATTGTTTTATTAA+TGG - chr4.1:32978190-32978209 MS.gene003775:CDS 20.0%
!!! TTTTCATTCATAATAACAAG+AGG + chr4.1:32978277-32978296 None:intergenic 20.0%
! AACTATCACTTAAATTAGGT+TGG - chr4.1:32979140-32979159 MS.gene003775:intron 25.0%
! ATTCAAACACAAAGCTAAAT+TGG - chr4.1:32979819-32979838 MS.gene003775:CDS 25.0%
! CAAGTAAAAGTTAAAAACAC+TGG - chr4.1:32979467-32979486 MS.gene003775:intron 25.0%
! GAGAAAATCAAAGAATACTA+AGG - chr4.1:32980168-32980187 MS.gene003775:CDS 25.0%
! GATTCTATATGCAATATATG+TGG + chr4.1:32978977-32978996 None:intergenic 25.0%
! TAAATTTCAATGGATGTTAG+TGG - chr4.1:32978889-32978908 MS.gene003775:CDS 25.0%
! TTCAAACACAAAGCTAAATT+GGG - chr4.1:32979820-32979839 MS.gene003775:CDS 25.0%
! TTTACCATATCCAAGTAAAA+TGG + chr4.1:32978082-32978101 None:intergenic 25.0%
!! GTTAGTGGAAAATTTGTTTA+GGG - chr4.1:32978904-32978923 MS.gene003775:CDS 25.0%
!! GTTTCTCTTTGAAGAAAATT+TGG + chr4.1:32978154-32978173 None:intergenic 25.0%
!! TCTTTGAAGAAAATTTGGAT+AGG + chr4.1:32978149-32978168 None:intergenic 25.0%
!! TGTTAGTGGAAAATTTGTTT+AGG - chr4.1:32978903-32978922 MS.gene003775:CDS 25.0%
!! TTTTCAAAGCTCGTTTATTA+TGG - chr4.1:32978702-32978721 MS.gene003775:CDS 25.0%
!!! AAAGCATACTTGTTTCTTTT+AGG + chr4.1:32978030-32978049 None:intergenic 25.0%
!!! GGAGATTTTTTAGAAGTTAA+TGG - chr4.1:32978747-32978766 MS.gene003775:CDS 25.0%
!!! TAAGACCTTGTTTATTTTAG+TGG - chr4.1:32979688-32979707 MS.gene003775:CDS 25.0%
!!! TTAATTGATTTGATATCTGC+AGG - chr4.1:32979063-32979082 MS.gene003775:CDS 25.0%
AAAGTTAAAAACACTGGTGA+AGG - chr4.1:32979473-32979492 MS.gene003775:intron 30.0%
AATCGTAATTCCTTTAGACA+AGG + chr4.1:32980026-32980045 None:intergenic 30.0%
AGGTAAAACACTTGAAGAAA+TGG - chr4.1:32980123-32980142 MS.gene003775:CDS 30.0%
AGTAGCCACTAAAATAAACA+AGG + chr4.1:32979696-32979715 None:intergenic 30.0%
ATATTGTAATAGCTGCACTA+GGG - chr4.1:32979540-32979559 MS.gene003775:CDS 30.0%
CTACAATCTTCAAAAAAGCT+GGG - chr4.1:32979615-32979634 MS.gene003775:CDS 30.0%
TATGTAGCAACTTTCTCAAT+TGG - chr4.1:32979875-32979894 MS.gene003775:intron 30.0%
TATTACAATATGACGAACTG+CGG + chr4.1:32979531-32979550 None:intergenic 30.0%
TTGTCTAAAGGAATTACGAT+TGG - chr4.1:32980025-32980044 MS.gene003775:intron 30.0%
! AAGCCTCTTTTGGTAAAATT+TGG - chr4.1:32980146-32980165 MS.gene003775:CDS 30.0%
! ACTTCCATTTTACTTGGATA+TGG - chr4.1:32978075-32978094 MS.gene003775:CDS 30.0%
! ACTTTTATGTTAGACCGATA+TGG - chr4.1:32979713-32979732 MS.gene003775:CDS 30.0%
! GTAGTGAAATTTTTCCTTTG+AGG - chr4.1:32979924-32979943 MS.gene003775:intron 30.0%
! TCTCCAAATTTTACCAAAAG+AGG + chr4.1:32980152-32980171 None:intergenic 30.0%
! TTTCTTTTAGGCTTCTTTTG+TGG + chr4.1:32978018-32978037 None:intergenic 30.0%
!!! AAATTTTTCCTTTGAGGTTG+AGG - chr4.1:32979930-32979949 MS.gene003775:intron 30.0%
!!! AATTTTTCCTTTGAGGTTGA+GGG - chr4.1:32979931-32979950 MS.gene003775:intron 30.0%
!!! CATTTTTTTCAACAAGCTTC+CGG - chr4.1:32979566-32979585 MS.gene003775:CDS 30.0%
AACATGAGGAAGTTGTAGTT+TGG + chr4.1:32978541-32978560 None:intergenic 35.0%
AACTACAACTTCCTCATGTT+TGG - chr4.1:32978541-32978560 MS.gene003775:CDS 35.0%
AAGTTGCACAAGTTCAGTTA+GGG - chr4.1:32980212-32980231 MS.gene003775:CDS 35.0%
ACACGTCATCATACAGATAT+TGG - chr4.1:32978310-32978329 MS.gene003775:CDS 35.0%
ACTACTATAAACCCATGTGA+TGG + chr4.1:32979909-32979928 None:intergenic 35.0%
AGTTGCTATACTCAATCCAA+TGG + chr4.1:32979846-32979865 None:intergenic 35.0%
ATCAACATCTACTCTCTCAT+TGG - chr4.1:32978412-32978431 MS.gene003775:CDS 35.0%
ATTACAATATGACGAACTGC+GGG + chr4.1:32979530-32979549 None:intergenic 35.0%
ATTATGCTTCCTGAAACACA+AGG - chr4.1:32980103-32980122 MS.gene003775:intron 35.0%
CAACAAAACTTCAGATTCCA+AGG - chr4.1:32979285-32979304 MS.gene003775:intron 35.0%
CAAGGTCTTAACAAATCCAA+CGG + chr4.1:32979678-32979697 None:intergenic 35.0%
CATATTGTAATAGCTGCACT+AGG - chr4.1:32979539-32979558 MS.gene003775:CDS 35.0%
CCTACAATCTTCAAAAAAGC+TGG - chr4.1:32979614-32979633 MS.gene003775:CDS 35.0%
CTACTATAAACCCATGTGAT+GGG + chr4.1:32979908-32979927 None:intergenic 35.0%
TAAAGAAGAGACTAACCTCT+GGG + chr4.1:32978669-32978688 None:intergenic 35.0%
TCCAAGTAAAATGGAAGTCA+TGG + chr4.1:32978073-32978092 None:intergenic 35.0%
TCTAAAGGAATTACGATTGG+TGG - chr4.1:32980028-32980047 MS.gene003775:intron 35.0%
TTAAAGAAGAGACTAACCTC+TGG + chr4.1:32978670-32978689 None:intergenic 35.0%
TTCAAAAAAGCTGGGATCAA+CGG - chr4.1:32979623-32979642 MS.gene003775:CDS 35.0%
TTGAATGATCGATGATCGTA+AGG + chr4.1:32979805-32979824 None:intergenic 35.0%
TTGTAGCAATACCTCCAAAT+AGG + chr4.1:32980063-32980082 None:intergenic 35.0%
! ACTTTTCTGTCCTTGTCTAA+AGG - chr4.1:32980013-32980032 MS.gene003775:intron 35.0%
! AGTGTTTTACCTTGTGTTTC+AGG + chr4.1:32980115-32980134 None:intergenic 35.0%
! TCCATGACTTCCATTTTACT+TGG - chr4.1:32978069-32978088 MS.gene003775:CDS 35.0%
!! ACAGATATTGGTGTTATGAG+TGG - chr4.1:32978322-32978341 MS.gene003775:CDS 35.0%
!! TTGGAGGTATTGCTACAATT+GGG - chr4.1:32980065-32980084 MS.gene003775:intron 35.0%
!! TTTGGAGGTATTGCTACAAT+TGG - chr4.1:32980064-32980083 MS.gene003775:intron 35.0%
!!! CCAGCTTTTTTGAAGATTGT+AGG + chr4.1:32979617-32979636 None:intergenic 35.0%
AACTTCAGATTCCAAGGAAG+AGG - chr4.1:32979291-32979310 MS.gene003775:intron 40.0%
ACAAAGCTAAATTGGGCCAT+TGG - chr4.1:32979827-32979846 MS.gene003775:CDS 40.0%
CAAGTTGCACAAGTTCAGTT+AGG - chr4.1:32980211-32980230 MS.gene003775:CDS 40.0%
CTTAACAAATCCAACGGCTA+TGG + chr4.1:32979672-32979691 None:intergenic 40.0%
! AAAACACTGGTGAAGGTGTA+TGG - chr4.1:32979480-32979499 MS.gene003775:intron 40.0%
! AGAGACCTTAAAGTATCCGA+CGG - chr4.1:32978364-32978383 MS.gene003775:CDS 40.0%
! CTGCAGGTTTTCATAAACAG+TGG - chr4.1:32979079-32979098 MS.gene003775:CDS 40.0%
! GAAGAAATGGAAGCCTCTTT+TGG - chr4.1:32980136-32980155 MS.gene003775:CDS 40.0%
! GGTGCATTTTTCCTATTTGG+AGG - chr4.1:32980049-32980068 MS.gene003775:intron 40.0%
! GGTGGTGCATTTTTCCTATT+TGG - chr4.1:32980046-32980065 MS.gene003775:intron 40.0%
! TGCTTTTGCTTGTGCTATGT+TGG - chr4.1:32978044-32978063 MS.gene003775:CDS 40.0%
! TTTTCCCGTCGGATACTTTA+AGG + chr4.1:32978372-32978391 None:intergenic 40.0%
!! GGGAAAATTGAGGTCTTGTT+AGG - chr4.1:32978385-32978404 MS.gene003775:CDS 40.0%
!! TTAGGTTGGAGAATGATGCT+TGG - chr4.1:32979154-32979173 MS.gene003775:intron 40.0%
!! TTGTGGTGTTGTGGTGAATA+GGG - chr4.1:32979967-32979986 MS.gene003775:intron 40.0%
ACATCGTCGTTGCAATCTTC+AGG + chr4.1:32979443-32979462 None:intergenic 45.0%
AGTATCCGACGGGAAAATTG+AGG - chr4.1:32978375-32978394 MS.gene003775:CDS 45.0%
CAAAACTACAGCGTCTACAC+CGG + chr4.1:32979588-32979607 None:intergenic 45.0%
CCAACACTAGTGAGTAACAG+TGG + chr4.1:32979746-32979765 None:intergenic 45.0%
CCACTGTTACTCACTAGTGT+TGG - chr4.1:32979743-32979762 MS.gene003775:CDS 45.0%
CTCGTAATGAGAGGTCGTTT+AGG - chr4.1:32979244-32979263 MS.gene003775:intron 45.0%
CTTATTGCAACCATAGCCGT+TGG - chr4.1:32979659-32979678 MS.gene003775:CDS 45.0%
CTTTCTCACTTCTTTCCCAG+AGG - chr4.1:32978651-32978670 MS.gene003775:CDS 45.0%
GCAACTTTCTCAATTGGTGC+AGG - chr4.1:32979881-32979900 MS.gene003775:intron 45.0%
GCAATCTTCAGGTATTCCAG+CGG + chr4.1:32979432-32979451 None:intergenic 45.0%
TAAGGCTCCGGCAAAGAAAA+TGG + chr4.1:32978503-32978522 None:intergenic 45.0%
TGGAGAATGATGCTTGGAGT+AGG - chr4.1:32979160-32979179 MS.gene003775:intron 45.0%
TGGAGTAGGTGCAATTCCTT+CGG - chr4.1:32979174-32979193 MS.gene003775:intron 45.0%
TGGTGAATAGGGTCACTAGT+GGG - chr4.1:32979978-32979997 MS.gene003775:intron 45.0%
TGGTGAGAAACCCATGAGTA+AGG + chr4.1:32978521-32978540 None:intergenic 45.0%
! CAAGACCTCAATTTTCCCGT+CGG + chr4.1:32978383-32978402 None:intergenic 45.0%
! CTGTTACTCACTAGTGTTGG+TGG - chr4.1:32979746-32979765 MS.gene003775:CDS 45.0%
! GAGACCTTAAAGTATCCGAC+GGG - chr4.1:32978365-32978384 MS.gene003775:CDS 45.0%
! TCCAGCGGCTTGTTTAATCT+CGG + chr4.1:32979417-32979436 None:intergenic 45.0%
!! ACTCACTAGTGTTGGTGGTA+TGG - chr4.1:32979751-32979770 MS.gene003775:CDS 45.0%
!! CTCATTGGTTCATGTCTTGC+CGG - chr4.1:32978427-32978446 MS.gene003775:CDS 45.0%
!! CTTGTGGTGTTGTGGTGAAT+AGG - chr4.1:32979966-32979985 MS.gene003775:intron 45.0%
!! GAGGTATTGCTACAATTGGG+TGG - chr4.1:32980068-32980087 MS.gene003775:intron 45.0%
!!! TTATAAAAAAAGTAAATTTT+AGG - chr4.1:32978726-32978745 MS.gene003775:CDS 5.0%
ACAGTGGACGACGACCATAT+CGG + chr4.1:32979730-32979749 None:intergenic 50.0%
AGAAGTGAGAAAGCCACGAG+AGG + chr4.1:32978644-32978663 None:intergenic 50.0%
AGACTTCAGCGGTATAGACC+GGG + chr4.1:32978612-32978631 None:intergenic 50.0%
ATATGACGAACTGCGGGTGT+AGG + chr4.1:32979524-32979543 None:intergenic 50.0%
CGACAAAACGGCCAAACATG+AGG + chr4.1:32978555-32978574 None:intergenic 50.0%
CGTTACACCATCGTGTTTGC+CGG - chr4.1:32978475-32978494 MS.gene003775:CDS 50.0%
CTATGCTCTCATGATTGCCC+CGG - chr4.1:32978591-32978610 MS.gene003775:CDS 50.0%
GAAACCCATGAGTAAGGCTC+CGG + chr4.1:32978515-32978534 None:intergenic 50.0%
GAGACTTCAGCGGTATAGAC+CGG + chr4.1:32978613-32978632 None:intergenic 50.0%
GGTGAATAGGGTCACTAGTG+GGG - chr4.1:32979979-32979998 MS.gene003775:intron 50.0%
GTAACGACGACCAATCCAGT+CGG + chr4.1:32978461-32978480 None:intergenic 50.0%
GTGGTGAATAGGGTCACTAG+TGG - chr4.1:32979977-32979996 MS.gene003775:intron 50.0%
TGGCATGGCTAAGACTCCAA+CGG + chr4.1:32979209-32979228 None:intergenic 50.0%
TTTGCCGGAGCCTTACTCAT+GGG - chr4.1:32978508-32978527 MS.gene003775:CDS 50.0%
!! ATGTTTGGCCGTTTTGTCGC+CGG - chr4.1:32978556-32978575 MS.gene003775:CDS 50.0%
AATCCAGTCGGAGGTTCTGC+CGG + chr4.1:32978449-32978468 None:intergenic 55.0%
AGAAAGCCACGAGAGGAAGC+GGG + chr4.1:32978637-32978656 None:intergenic 55.0%
AGCATAGCCGATGCCAACTC+CGG + chr4.1:32978578-32978597 None:intergenic 55.0%
CCAACGGCTAGGATTACCGA+AGG + chr4.1:32979193-32979212 None:intergenic 55.0%
CCAAGGAAGAGGCTCAGCTA+AGG - chr4.1:32979302-32979321 MS.gene003775:intron 55.0%
CCACGATGGCTCGTAATGAG+AGG - chr4.1:32979235-32979254 MS.gene003775:intron 55.0%
CCTCTCATTACGAGCCATCG+TGG + chr4.1:32979238-32979257 None:intergenic 55.0%
CCTTAGCTGAGCCTCTTCCT+TGG + chr4.1:32979305-32979324 None:intergenic 55.0%
CCTTCGGTAATCCTAGCCGT+TGG - chr4.1:32979190-32979209 MS.gene003775:intron 55.0%
CCTTGTGCCCTCAACCTCAA+AGG + chr4.1:32979941-32979960 None:intergenic 55.0%
CTTTGCCGGAGCCTTACTCA+TGG - chr4.1:32978507-32978526 MS.gene003775:CDS 55.0%
GACTTCAGCGGTATAGACCG+GGG + chr4.1:32978611-32978630 None:intergenic 55.0%
GAGAAAGCCACGAGAGGAAG+CGG + chr4.1:32978638-32978657 None:intergenic 55.0%
GCCGAGATTAAACAAGCCGC+TGG - chr4.1:32979413-32979432 MS.gene003775:intron 55.0%
TCCGGCAAAGAAAATGGCGC+CGG + chr4.1:32978497-32978516 None:intergenic 55.0%
TGCCAACTCCGGCGACAAAA+CGG + chr4.1:32978567-32978586 None:intergenic 55.0%
TGGCTAAGACTCCAACGGCT+AGG + chr4.1:32979204-32979223 None:intergenic 55.0%
TGGTGCAGGACCCATCACAT+GGG - chr4.1:32979895-32979914 MS.gene003775:intron 55.0%
TTGGTGCAGGACCCATCACA+TGG - chr4.1:32979894-32979913 MS.gene003775:intron 55.0%
TTTGTCGCCGGAGTTGGCAT+CGG - chr4.1:32978568-32978587 MS.gene003775:CDS 55.0%
! AGGTGCAGCTTGTGGTGTTG+TGG - chr4.1:32979958-32979977 MS.gene003775:intron 55.0%
!! CCTTTGAGGTTGAGGGCACA+AGG - chr4.1:32979938-32979957 MS.gene003775:intron 55.0%
AAAGCCACGAGAGGAAGCGG+GGG + chr4.1:32978635-32978654 None:intergenic 60.0%
ACGACGACCAATCCAGTCGG+AGG + chr4.1:32978458-32978477 None:intergenic 60.0%
ACGAGCCATCGTGGTGACTC+TGG + chr4.1:32979229-32979248 None:intergenic 60.0%
AGGGCACAAGGTGCAGCTTG+TGG - chr4.1:32979950-32979969 MS.gene003775:intron 60.0%
CCATCGTGGTGACTCTGGCA+TGG + chr4.1:32979224-32979243 None:intergenic 60.0%
CCATGCCAGAGTCACCACGA+TGG - chr4.1:32979221-32979240 MS.gene003775:intron 60.0%
GAAAGCCACGAGAGGAAGCG+GGG + chr4.1:32978636-32978655 None:intergenic 60.0%
GGCAGAACCTCCGACTGGAT+TGG - chr4.1:32978448-32978467 MS.gene003775:CDS 60.0%
!! AATGGCGCCGGCAAACACGA+TGG + chr4.1:32978485-32978504 None:intergenic 60.0%
!! GCCGGCGCCATTTTCTTTGC+CGG - chr4.1:32978493-32978512 MS.gene003775:CDS 60.0%
GGAAGCGGGGGAGACTTCAG+CGG + chr4.1:32978623-32978642 None:intergenic 65.0%
TTGCCGGCAGAACCTCCGAC+TGG - chr4.1:32978443-32978462 MS.gene003775:CDS 65.0%
!! GGCCGTTTTGTCGCCGGAGT+TGG - chr4.1:32978562-32978581 MS.gene003775:CDS 65.0%
GTCTCCCCCGCTTCCTCTCG+TGG - chr4.1:32978628-32978647 MS.gene003775:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 32977958 32980252 32977958 ID=MS.gene003775
chr4.1 mRNA 32977958 32980252 32977958 ID=MS.gene003775.t1;Parent=MS.gene003775
chr4.1 exon 32980114 32980252 32980114 ID=MS.gene003775.t1.exon1;Parent=MS.gene003775.t1
chr4.1 CDS 32980114 32980252 32980114 ID=cds.MS.gene003775.t1;Parent=MS.gene003775.t1
chr4.1 exon 32979538 32979884 32979538 ID=MS.gene003775.t1.exon2;Parent=MS.gene003775.t1
chr4.1 CDS 32979538 32979884 32979538 ID=cds.MS.gene003775.t1;Parent=MS.gene003775.t1
chr4.1 exon 32978887 32979125 32978887 ID=MS.gene003775.t1.exon3;Parent=MS.gene003775.t1
chr4.1 CDS 32978887 32979125 32978887 ID=cds.MS.gene003775.t1;Parent=MS.gene003775.t1
chr4.1 exon 32977958 32978801 32977958 ID=MS.gene003775.t1.exon4;Parent=MS.gene003775.t1
chr4.1 CDS 32977958 32978801 32977958 ID=cds.MS.gene003775.t1;Parent=MS.gene003775.t1
Gene Sequence

>MS.gene003775

ATGAGTGAGGGAAAGATAGTTGAAGCAAAAGCTCAAAAAAATCTTCAAGATTTTGATCCACAAAAGAAGCCTAAAAGAAACAAGTATGCTTTTGCTTGTGCTATGTTGGCTTCCATGACTTCCATTTTACTTGGATATGGTAAATAATTACTATACACCATCTCATATTATATTTTATTTATTATACTCCTATCCAAATTTTCTTCAAAGAGAAACAAGTATGATTTTGCTTGTGCTATATTGTTTTATTAATGGTAAATATTAGTACGTTAATTGTTACGTTAGTATTCTCTTTAATCATTTGCCAATATTTTATCCTCTTGTTATTATGAATGAAAAATGTTGATTTTTGACACGTCATCATACAGATATTGGTGTTATGAGTGGAGCAGCAATCTACATACAAAGAGACCTTAAAGTATCCGACGGGAAAATTGAGGTCTTGTTAGGAATCATCAACATCTACTCTCTCATTGGTTCATGTCTTGCCGGCAGAACCTCCGACTGGATTGGTCGTCGTTACACCATCGTGTTTGCCGGCGCCATTTTCTTTGCCGGAGCCTTACTCATGGGTTTCTCACCAAACTACAACTTCCTCATGTTTGGCCGTTTTGTCGCCGGAGTTGGCATCGGCTATGCTCTCATGATTGCCCCGGTCTATACCGCTGAAGTCTCCCCCGCTTCCTCTCGTGGCTTTCTCACTTCTTTCCCAGAGGTTAGTCTCTTCTTTAATTTATCTATATTTTTTCAAAGCTCGTTTATTATGGATTATAAAAAAAGTAAATTTTAGGAGATTTTTTAGAAGTTAATGGAACATTTGATAGAATAGTAAATTCTCAATTGAATACCTTGATAAATAGAGATAAAAAAAGTAAAAGTGGACAAACATAAATAACTCTTATAAAACTGGTGCAATAATTTGATAGAATAGTAAATTTCAATGGATGTTAGTGGAAAATTTGTTTAGGGTACATAGCCTTTTAAAAGAAATTATGCATTTCTGTTATTTTTTTTCTCCACATATATTGCATATAGAATCTTTACTAGTAGCATATCTATTTAATATTCATAATACACGATAATATAGGTGTAAAAATTTAACATTTTAATTGATTTGATATCTGCAGGTTTTCATAAACAGTGGAATATTAATCGGATACATATCAAACTATGCATTTTCAAAACTATCACTTAAATTAGGTTGGAGAATGATGCTTGGAGTAGGTGCAATTCCTTCGGTAATCCTAGCCGTTGGAGTCTTAGCCATGCCAGAGTCACCACGATGGCTCGTAATGAGAGGTCGTTTAGGAGACGCAATAAAAGTACTCAACAAAACTTCAGATTCCAAGGAAGAGGCTCAGCTAAGGTTAGCCGAGAATAAATGATCAATTTGATTGTACTATCTTTATTTTAACATTTGAATGACGCTTATTTTTTTGTCGATAAAATAGATTAGCCGAGATTAAACAAGCCGCTGGAATACCTGAAGATTGCAACGACGATGTTGTTCAAGTAAAAGTTAAAAACACTGGTGAAGGTGTATGGAAAGAGCTTTTTCTTCATCCTACACCCGCAGTTCGTCATATTGTAATAGCTGCACTAGGGATTCATTTTTTTCAACAAGCTTCCGGTGTAGACGCTGTAGTTTTGTATAGTCCTACAATCTTCAAAAAAGCTGGGATCAACGGTGATACGCATCTTCTTATTGCAACCATAGCCGTTGGATTTGTTAAGACCTTGTTTATTTTAGTGGCTACTTTTATGTTAGACCGATATGGTCGTCGTCCACTGTTACTCACTAGTGTTGGTGGTATGGTAGTCTCGCTTCTCACACTCGCTGTCAGCCTTACGATCATCGATCATTCAAACACAAAGCTAAATTGGGCCATTGGATTGAGTATAGCAACTGTTTTGTCATATGTAGCAACTTTCTCAATTGGTGCAGGACCCATCACATGGGTTTATAGTAGTGAAATTTTTCCTTTGAGGTTGAGGGCACAAGGTGCAGCTTGTGGTGTTGTGGTGAATAGGGTCACTAGTGGGGTTATTTCAATGACTTTTCTGTCCTTGTCTAAAGGAATTACGATTGGTGGTGCATTTTTCCTATTTGGAGGTATTGCTACAATTGGGTGGATATTTTTTTATATTATGCTTCCTGAAACACAAGGTAAAACACTTGAAGAAATGGAAGCCTCTTTTGGTAAAATTTGGAGAAAATCAAAGAATACTAAGGAAGCTGAAAAAGACAATGCTCAAGTTGCACAAGTTCAGTTAGGGACCAATGTCTCAACTTAG

Protein sequence

>MS.gene003775.t1

MSEGKIVEAKAQKNLQDFDPQKKPKRNKYAFACAMLASMTSILLGYDIGVMSGAAIYIQRDLKVSDGKIEVLLGIINIYSLIGSCLAGRTSDWIGRRYTIVFAGAIFFAGALLMGFSPNYNFLMFGRFVAGVGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINSGILIGYISNYAFSKLSLKLGWRMMLGVGAIPSVILAVGVLAMPESPRWLVMRGRLGDAIKVLNKTSDSKEEAQLRLAEIKQAAGIPEDCNDDVVQVKVKNTGEGVWKELFLHPTPAVRHIVIAALGIHFFQQASGVDAVVLYSPTIFKKAGINGDTHLLIATIAVGFVKTLFILVATFMLDRYGRRPLLLTSVGGMVVSLLTLAVSLTIIDHSNTKLNWAIGLSIATVLSYVATFSIGAGPITWVYSSEIFPLRLRAQGAACGVVVNRVTSGVISMTFLSLSKGITIGGAFFLFGGIATIGWIFFYIMLPETQGKTLEEMEASFGKIWRKSKNTKEAEKDNAQVAQVQLGTNVST